>input_sequence_41638
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---------------------------------------------------------------------ATGGAGCCCCC
GCCGCAATCTCCATCCGTCTACCTCGACATTCCTCCGTCGCCCTATGGCGGCACTGTCGGGGACCTGGTGCTCCCATACA
TCACTCGCATTCTGATGGAGGAGGACATCGACGACAGGTTCTTCTACCAGTACCCAGACCATCTTGCCTTCCTCCAGGCG
CAGCAGCAATTTACCCAAATTCTTGATGATGCCAAGAACTTACTGTCCGGTGAAGGCGGCGACATGGAGAAGATGCATTC
CGATGAGTCTTTGCAGGGTATTCGTGGAGGCAGCATGTGCTTGGCTGACAAGGACGTCCCGAGTTGGACGTTCTCGGATG
GTGCTGAGGTGGACAATAATGGTGATCAGAGCAAACTCAACCCCTCCAATAGAGACATGCTTAACTTTGCATTCTTGAAA
GGCATGGAGGAGGCCAACAAGTTCTTGCCTAGAGACAACCAACCGCAGGCTGATGTCTTCAGCATCAACCAAGCAAAAGA
GATTTTTGGGGGACGGAAGGC------------------TCGGCGTGATGCGGACAAGCCGGAGGAAGTGGTGGGCAGGG
CCAGCAAACTGCTGATGCCGGAGCTGGAAGAGGATGGCGCCCGCGAGATGATCAACAAAATAATGCTGAATAGTTACGAA
CTATGCGGGGAGACCATGGAGGAGCTGCAAATCACCATGGAGAACATCAGAGCTGATAGAAAAAATAAGAAGGCGGTGCG
GGGAAAGCAGGGAAAGAAAGAGGCGGTGGACCTGCGCGGGCTGCTGCTATGCTGCGCACAGGAGGTGGCCACCGGCAACC
GTCATGGTGCGGGCAATCTGCTGAAACAGATCAGGCAGCATGCTTCCGCAACAGGAGATGCCGCTCAGCGGCTGGCGCAT
TGTTTCGCCAAGGGGCTTGAGGCCCGGCTGGCGGGCACTGGGAGCCAGGTGTACAAGTCACTCATGGCGAAGCACACCTC
GACCATGGAGTTCCTCAAAGGTTATGAGCTGTTCATGGCAGCCTGCTCCTTCAAAAGGGTGGCGTTCACATTCTCCAGCA
TGACCATCTTCGATGCCGTGGAAGGGAAGAGCAAGTTGCACATTGTGGATTATGGCTTGCATTATGGGTGCCAGTGGCCG
GGCCTGCTGGCTTGGCTGGCGACTAGGGACGGCGGGCCACTGGAAGTGAGGATCACCGGGATTGACCTCCCGCAGCCTGG
GTTCCGCCCAGCTAAGAGGCTTGAGGAGACAGGGCGGGCACTCAGCAACTGTGCCCGTCAGTTTGGCTTGCCGTTCAAGT
TCCGTGGCATCGCGGCTAAGTGGGAGACTATCCGTGCCGAGGACCTCAACATCGACCCTGACGAGGTGCTTGTGGTGAAT
GACTTGTTCAATTTCAACACCTTGATGGACGAGAGCCTTGTTATCGACAGACCCAGCCCCAGGGATGTGGTCCTCAGCAA
CATCCGGGAGATGCAGCCAGTTGTGTTCATCCAAGGTGTTGTGAACGGTTCGAGCGGCCCATTTTTCTTGGCGCGGTTCC
GGGAGGCGCTCTTCTTTTACTCATCGGTGTTCGACATGCTTGATGCCACCACACCACCAGATAGCTACCAGCGCTTCGTT
CTCGAGCGGGACATGTTCGGGCAGTGTGCTCTGAATACTATCGCCTGCGAGAGTGCAGACCGGGTAGAGCGTCCTGAGAC
ATACAAACAGTGGCAGCTGAGAAACCAACGTGCAGGCCTCAGACAGCTGCCACTGAAGCCGATTATCACTAAGGTGGCAA
CAGGCAAGGTCAAGAGCCTGTACCACAAGGAGTTTGTTGTGGATGTGGATCAGGGGTGGTTGCTGCAGGGGTGGAAGGGC
CGCATCCTATATGCTCACTCGGCGTGGGTGGCAGACGACACTAGCTCGGAGTATTAG-----------------------
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>chr4B_1_TraesCS4B01G141100
CCACAGCGCGCGCTAATAGGTTTTTTGCGCGCAGCGCTTTAGCACGGCTGTTGGAGATGCTCTAAGTAAATGTATCTCTT
TACTTAGCATATTGTAATTCCTTTTGCTTCTGGCTGGGGTATGTCACATGC-----CAATTGCATTGCATGGGCCATATT
TTTTACCG--ATAGCAAATATGGTAACCAATTTCGTTGCCTCTGAAACTCTTCTAACTAACACGAACCTGTGCCCATTGT
GTGTTATATTCGTATTGCTTGCCTGAAATTGCTAT-TCTCTCTATGCTTTAATATTTCA--------GGTCACATGTTCA
TTGATTGAGCGTTATGTTTACTAGCAGATTTATAGTGCTACTGGGCCTGTGTGCAGTGAATGGGATAAACTGCAGGCCTG
AAGGTACCGAATGACTTCTTCAATCTAATAGTGAATTAGTGATTACAGATTAAACAAAATACTGGCTCATGAGAGATGAA
AGCATGCTAAAAA-CTGCAATTATGTGTTTTAATACTGAAAAAAATGCAAGTTCGCATGTAACAGTATACTTCTCCCTTG
TGGTTGCTAAATTTATAGTATTACAATGCTAAACTTTGTTTAGTCGTTCAGTAAGGACTGTTGTTTTTCCTTAATTTTTG
TAAATATTTGTAAATTTT----------GGTTGTTCCTGCTATCTTGGCGCTTTCATAATGAAAAGGACATGCTACCAGG
TGTGTTCGAGAAAAATAATCAACCTATAGAAATATATTCTAGGACAATCATACTATTGTGTGATGCGGACAAACAGGAGG
ATCAGCCATGTCCTGATATATACTATAGGACAATTCTTTTTTTAAGAGCCATAAGCCATGTCCATTTGGAGGATG-TCGT
TGATTCCAAGTCTCCAGGCATGGGAAGAACCGACCCCTTTCTCTGTACAAGAGCAACCAGCCATATCCTTGTGGAGCGCA
GCACCATCACCAGTTCAGTTCACCAACATATCCATCA-CCCCGAGGAGTTGCTGGGGCTGAAGGAACACATGGAGCCCCC
GCCGCAATCTCCATCCGTCTACCTCGACATTCCTCCGTCGCCCTATGGCGGCACTGTCGGGGACCTGGTGCTCCCATACA
TCACTCGCATTCTGATGGAGGAGGACATCGACGACAGGTTCTTCTACCAGTACCCAGACCATCTTGCCTTCCTCCAGGCG
CAGCAGCAATTTACCCAAATTCTTGATGATGCCAAGAACTTACTGTCCGGTGAAGGCGGCGACATGGAGAAGATGCATTC
CGATGAGTCTTTGCAGGGTATTCGTGGAGGCAGCATGTGCTTGGCTGACAAGGACGTCCCGAGTTGGACGTTCTCGGATG
GTGCTGAGGTGGACAATAATGGTGATCAGAGCAAACTCAACCCCTCCAATAGAGACATGCTTAACTTTGCATTCTTGAAA
GGCATGGAGGAGGCCAACAAGTTCTTGCCTAGAGACAACCAACCGCAGGCTGATGTCTTCAGCATCAACCAAGCAAAAGA
GATTTTTGGGGGACGGAAGGC------------------TCGGCGTGATGCGGACAAGCCGGAGGAAGTGGTGGGCAGGG
CCAGCAAACTGCTGATGCCGGAGCTGGAAGAGGATGGCGCCCGCGAGATGATCAACAAAATAATGCTGAATAGTTACGAA
CTATGCGGGGAGACCATGGAGGAGCTGCAAATCACCATGGAGAACATCAGAGCTGATAGAAAAAATAAGAAGGCGGTGCG
GGGAAAGCAGGGAAAGAAAGAGGCGGTGGACCTGCGCGGGCTGCTGCTATGCTGCGCACAGGAGGTGGCCACCGGCAACC
GTCATGGTGCGGGCAATCTGCTGAAACAGATCAGGCAGCATGCTTCCGCAACAGGAGATGCCGCTCAGCGGCTGGCGCAT
TGTTTCGCCAAGGGGCTTGAGGCCCGGCTGGCGGGCACTGGGAGCCAGGTGTACAAGTCACTCATGGCGAAGCACACCTC
GACCATGGAGTTCCTCAAAGGTTATGAGCTGTTCATGGCAGCCTGCTCCTTCAAAAGGGTGGCGTTCACATTCTCCAGCA
TGACCATCTTCGATGCCGTGGAAGGGAAGAGCAAGTTGCACATTGTGGATTATGGCTTGCATTATGGGTGCCAGTGGCCG
GGCCTGCTGGCTTGGCTGGCGACTAGGGACGGCGGGCCACTGGAAGTGAGGATCACCGGGATTGACCTCCCGCAGCCTGG
GTTCCGCCCAGCTAAGAGGCTTGAGGAGACAGGGCGGGCACTCAGCAACTGTGCCCGTCAGTTTGGCTTGCCGTTCAAGT
TCCGTGGCATCGCGGCTAAGTGGGAGACTATCCGTGCCGAGGACCTCAACATCGACCCTGACGAGGTGCTTGTGGTGAAT
GACTTGTTCAATTTCAACACCTTGATGGACGAGAGCCTTGTTATCGACAGACCCAGCCCCAGGGATGTGGTCCTCAGCAA
CATCCGGGAGATGCAGCCAGTTGTGTTCATCCAAGGTGTTGTGAACGGTTCGAGCGGCCCATTTTTCTTGGCGCGGTTCC
GGGAGGCGCTCTTCTTTTACTCATCGGTGTTCGACATGCTTGATGCCACCACACCACCAGATAGCTACCAGCGCTTCGTT
CTCGAGCGGGACATGTTCGGGCAGTGTGCTCTGAATACTATCGCCTGCGAGAGTGCAGACCGGGTAGAGCGTCCTGAGAC
ATACAAACAGTGGCAGCTGAGAAACCAACGTGCAGGCCTCAGACAGCTGCCACTGAAGCCGATTATCACTAAGGTGGCAA
CAGGCAAGGTCAAGAGCCTGTACCACAAGGAGTTTGTTGTGGATGTGGATCAGGGGTGGTTGCTGCAGGGGTGGAAGGGC
CGCATCCTATATGCTCACTCGGCGTGGGTGGCAGACGACACTAGCTCGGAGTATTAGCTGCCTTTTTCTGCATAGGAAAG
G---TTAATG-TTATGGAGATTTG-------TATACGATACAGCTGAGGCATCCCCTCCTGTTTCCTTCAAACATCTTAA
ATTTCGCTCTTAGACACGAATATGAATAACA--CCAGGGTGCCACTTGCCGCATGC------TAAATGTCTCCTGTAAGC
TGCCTTAAAGTTACATTTTTTTTAGACATTAAGTTTCAGTT-TGATGAGTAAAGACTTAATGTAAAGGTCAATTGCTGTT
GCAGCAGCAGATGTTTATGTGCTTCCACTCATTCT---TCTTCTTCAGTTATCTCATTAAGACATGATACCCGAAGAAGA
AGATATATAATCTGTAGTCTTGTATAAGAGGACCAATAAATTCAGTGTCATGTGTAAAAGGATTGCTGGAAATTGTTCAA
AGAAAAAGGATAACTCAAATGTCTTGAATTTGTAATTTCTTTCTCTGCGTTTTCATCTTACAAATCCGTTTGCCTACTTG
CAGGTGTCCAAGTGTGGAGCAGGA-AAGAAACATAACTGTACATGGTTAAAGGTTACATGCATCTAGAAA--CTGGCTAC
TA------------------------------------------------------------------------------
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-----CATGTGAGCTA-ATCAATTTTCAGGATAATACTAGAGAACTTTC-AATTATTTTACCTGCTAG------TGCTAC
----TACATGTCGAACTCACAACAGCCTGACATTTTAAAAC--ATATATTGATGTCTACAAGAAAGTTGACTGCTTCTGA
AGTTCTGATCAGACAAGGACAGAATGCTGTCTGCGACAACAAGATGGATATAATCTTTCTCAAAAGCCTCTCTTTGTCCA
TGTGTGCAGGCGCAGGTCGGCCGGTGGACAGTTAAACTAACCTTGTGAAATGTGAAGCTACGATGGTTCCAATAGACAGC
AAC--GAACTGTACGAT-------GTCCGAGGTGCTTGTTG--GCTTCACATGAAATGGATGGATGACAG------TGAT
ATATCCACTCCAAATCCAATATAGTTTCACTGCATCATCAGAGATCAGCATGCACTCCACTATGGCTGCCACACCGG
>chr4D_61
------------------------------------------------------------TCTAAGTAAATGTATCTCTT
CACTTGGCATCTTCTAATTCCTTTTGCTTCTGGCCGGGGTATGTCACATGCCAATTCAATTGCATTGCATGGGCCATATT
TTTTACCGG--TAGCAAATATGGTAACCAATTTCATTGCCTCTGAAACTCTTCTAACTAACACGAACCTGTGCCCATTGT
GTGTTATATTCGTATTGCTTGCCTGGAATTGCTATTTCTCTCTATGCTTTAATGTTTCAGCCTTTCAGGTCACAAGTTCA
TTGATTGAGCGTTATGTTTACTAGCAGGTTTGTAGTGCTACTGGGCCTGTGTGCAGTGAATGGGATAAACGGCAGGTCTG
AAGGTACCGAATGACTACTTCAATCTAATAGTGATTTAGTGATTACAGATTAAACAAAATACTGGCTCATGAAAGATGAA
AGCATGCTAAAAAACTGCAATTATATGTTTTAATACTGAAAAAAATGCAAGTTCGCATGTAACAGTATACTTCTCCCTTG
TGGTT---------------------------------------------------------------------------
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>chr4A_62
-------------------------------------------------------------CTAAGTAAATGTATCTCTT
CACTTAGCATCTTCTAGTTCCTTTTGCTCCTGGCTGGGGTATGTCACATGC-----CAATTGCATTGCATGGGCCATACT
TTTTTTACCAATAGCAAATATGGTAACCAATTTCGTTGCCTCTGAAACTCTT----CTAACCCGAACCTGTGCCCATTGT
GTGTTATATTCGTATTGCTTGCCTGGAATTGCTATTTCTCTCTATGCTTTAATGTT--------TCAGGTCACAAGTTCA
TTGATTGAGCGTTATGTTTACTAGCAGGTTTGTAGTGCTACTGGGCCTGTGTGCAGTGAATGGGATAAACGGCAGGTCTG
AAGGTACCGAATGACTACTTCAATCTAATAGTGATTTAGTGATTACAGATTAAACAAAATACTGGCTCATGAAAGATGAA
AGCATGCTAAAAAACTGCAATTATGTGTTTTAATACTGAAAAAAATGCAAGTTCGCATGTAACAGTATACTTCTCCCTTG
TGGTT--------TATAGTATTACAATGCTAAACTTTGTTTAGTCGTTCAGTAAGGACTGTTGTTTTTCCTTTATTTTTG
TAAATA----------TT----------GGTTGTTCCTGCTATCTTGGCGCTTTCATAATGAAAAAGACATGCTGCCAGG
TGTGTTTGAGAAAAATAATCAACCTA---------------GGACAGTCATACTATTGTGTGATGGTGACAAACAGGAGG
ATCAGCCATGTCCTGATATATACTATAGGACAATTCTTTTTTTAAGAGCCATCAGCCATGTCCATTTGGAGGATGATCGT
TGATTCCAAGTCTCCAAGCATGGGAAGAACCGACGCCTTTCTCTGTACAAGAGCAACCAGCCATATCCTTGTGGAGCGCA
GCACCATCACTAGTTCAGTTCACCACCATGCCCATCGCCCCCGAGGAGTTGCTGGGGCTGAAGGAACACATGGAGCCCCC
GCCGCCATCCCCATCCGTCTACCTTGACATTCCTCCGTCGCCCTATGGCGGCAGTGTCGGGGACCTGGTGCTCCCATACA
TCACTCGCATGCTGATGGAGGAGGACATCGACGACAGGTTCTTCTACCAGTACCCAGACCATCTTGCCTTCCTCCAGGCG
CAGCAGCAATTTACCCAAATTCTTGATGATGCCAAGAACTTACTGTCCGGCGAAGGTGGCGACATGGAGAAGATGCATTC
TGATGCGTCTTTGCAGGGTATTCGTGGAGGTAGCATGTGCTTGGCTGACAAGGACGTCCCGAGTTGGACGTTCTCGGATG
GTGCTGAGGTGTACAATAATGGTGATCAGAGCAAACTCAACCGCTCCAATGAAGCCATGCTTAACTTTGCATTCTTGAAA
GGCATGGAGGAGGCCAACAAGTTCTTGCCTAGAGACAACCAACCGCAGGCTGATGTCTTCAGCGTCGACCAAGCGAAGGA
GATTTTTGGGCGAAGCATTAGTGGTGGGGGACGGAAGGGTCAGCGTGATGTGGACAAGCTGGAGGAAGTGGTGGGCAGGG
CCAGCAAACTGCTGATGCCGGAGCTGGAAGAGGATGGCGCCAGCGAGATGATCAACAAAATAATGCTGAATAGTTACGAA
CTATGTGGGGAGACCATGGAGGAGCTGCAAATCACCATGGAGAACATCAGAGCTGATAGAAAAAATAAGAAGGCGGTGCG
GGGAAAGCAGGGAAAGAAAGAGGCGGTGGACCTGCGCGGGCTGTTGCTATGCTGCGCACAGGAGGTGGCCACCGGCAACC
GTCATGGCGCGGGCAATCTGCTGAAACAGATCAGGCAACATGCTTCCGCAACAGGAGATGCCGCTCAGCGGCTGGCGTAT
TGTTTCGCCAAGGGGCTTGAGGCCCGGCTGGCGGGCACTGGGAGCCAGGTGTACAAGTCACTCATGGCGAAGCACACCTC
GACCATGGAGTTCCTCAAAGGTTACGAGCTGTTCATGGCAGCCTGCTCCTTCAAAAGGGTGGCGTTCACATTCTCCAGCA
TGACCATCTTCGATGCCGTGGAAGGGAAGAGCAAGTTGCACATTGTGGATTATGGCTTGCATTATGGGTGCCAGTGGCCG
GGCCTGCTGGCTTGGCTGGCGACCAGGGACGGCGGGCCACCGGAGGTGAGGATCACCGGGATTGACCTCCCGCAGCCCGG
GTTCCGCCCGGCTAAGAGGCTTGAGGAGACAGGGCGGGCACTCAGCAACTGTGCCCGTCAGTTTGGCTTGCCGTTCAAGT
TCCATGCCATCGCGGCCAAGTGGGAGACTATCCGTGCCGAGGACCTCAACATCGACCCTGACGAGGTGCTTGTGGTGAAT
GACCTGTTCAATTTCAACACCTTGATGGACGAAAGCCTTGTTATCGACAGACCCAGCCCCAGGGATGTGGTCCTCAGCAA
CATCCGGGAGATGCAGCCAGATGTGTTCGTCCAAGGTGTTGTGAATGGTTCTAGCGGCCCATTTTTCTTGGCCCGGTTCC
GGGAGGCACTCTTCTTTTACTCATCGGTGTTCGACATGCTTGACACCACCACACCGCCAGAGAGCTACGAGCGCTTCGTT
CTCGAGCGGGACATGTTCGGGCAGTGTGCCCTGAATACTATCGCCTGCGAGAGTGCAGACCGGGTAGAGCGTCCCGAGAC
ATACAAACAGTGGCAGCTGAGAAACCAACGTGCAAGCCTCAGACAGCTGCCACTGAAGCCGATTATCACCAAGGTGGCAA
CAGGCAAGGTCAAGAGCCTGTACCACAAGGAGTTTGTTGTGGATGTGGATCAGGGGTGGTTGCTGCAGGGGTGGAAGGGC
CGCATCCTATATGCTCACTCGGCGTGGGTGGCAGACGACACTAGCTCCGAGTATTAGCTGCCTTTTTCTGCCTATAAGAG
G---TTAATCTTT--GGACATTAGTAGTACTTATGAGATACAACTGGGGCATCCCCTCCTGTTTCCTCCAACCATCTTAA
ATTTCGCTCTTAGACACGAATATGAATAACA--CCAGGGTGCCAC-TGCCGCATGC------TAAATGTCTCCTGTAAGC
TGCCTTAAAGTTACATTTTTTTTAGACATTAAGTTTCAATT-TGATGAGTAAAGACTTGATGTAAAGGTCAATTGTTGTT
GCAGCAGCAGATGTTTATGTGCTTCCACTCATTCTTCTTCTTCTTCAGTTATCTCATTAAGACATGATACCCGAAGA---
AGATATATAATCTGTAGTCTTG--TAAGAGGACCAATAAATTCAGTGTCATATGTAAAAGGATTACTGGAAATTGTTCAA
AGAAAAAGGATAACTGAAATGTATTGAATTTGTAATTTCTTTCTCTGCGTTTTCATCTTACAAATCCGTTTGCCTACTTG
CAGGTGTCCAAGTGTGTAGCAGGA-AAGAAACATAAATGAACATGGTTAAAGGTTACATGCATCTAGAAA--CTGGCTAC
TACTCCCTCCGTTCAGAATTACTTGTCCCG---------------------------------AAAATGGATGTATCTAG
AA-CTCAAATATGTCTAGATACATCCATTTCTGCGACAAGTAATTCC------------------------GAACAGAGG
GAGTACATGTGACCTA-ATCAATTTTCAGGATAATACTAGAGAACTTTC-AATTATTTTATCTGCTAG------TGCTAC
TACGTACATGTTGAACTCACAACAGCCTGACATTCTAAAAC--ATAAATTGATGTCTACAAGAAAGTTGACTGCTTCTGA
AGTTCTGATCAGACAAGGACAGAATGCTGGCTGCGACAACAAGATGGATATAATCTTTCTCAAAAGCCTCTCTTTGTCCA
TGTGTGCAGGCGCAGGTCGGCCGGTGGACGGTTAAACTAACCTTGTGAAATGTGAAGCTACGATGGTTCCAATAGACAGC
AAC--GTACTGTACGAT-------GTCCGAAGTGCTTGTTTTTGCTTCACATGAAACGGATGGATGACAG------TGAT
ATATCCACTCCAAATCCAATATAGTTTCACTGCACCATCAGAAATCAGCATGCACTCCACTATGGCTGCCACACC--
>chr4D_559
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---------------TAGTATTACAATGCTAAACTTTGTTTAGTCGTTCAGTAAGGACTGTTGTTTTTCCTTTATTTTTG
TAAATA----------TTTGTAAATTTTGGTTGTTCCTGCTATCTTGGTGCTTTCATAATGAAAAGGACACGCTGCCAGG
TGTGTTCGAGAAAAATAATCAACCTA---------------GGACAGTCATACTATTGTGTGATGGGGACAAACAGGAGG
ATCAGCCATGTCCTGATATATACTATAGGACAATTCTTTTTTTAAGAACCATCAGCCATGTCCATTTGGAGGATGATCGT
TGATTCCAAGTCTCCAAGCATGGGAAGAACCGACGCCTTTCTCTGTACAAGAGCAACCAGCCATATCCTTGTGGAGCGCA
GCACCATCACTAGTTCAGTTCACCACCATGCCCATCGCCCGCGAGGAGTTGCTGGGACTGAAGGAACACATGGAGCCCCC
GCCGCCATCTCCATCCGTCTACCTTGACATTCCTCCGTCGCCCTGTGGCGGCAGTGTCGGGGACCTGGTGCTTCCATACA
TCACTCGCATTCTGATGGAGGAGGACATCGACGACAGGTTCTTCTACCAGTACCCAGACCATCTTGCCTTCCTCCAGGCG
CAGCAGCAATTTACCCAAATTCTTGATGATGCCAAGAACTTACTGTCCTGCGAAGGTGGCGACATGGAGAAGATGCATTC
CGATGCGTCTTTGCAGGGTATTCGTGGAGGCAGCATGTGCTTGGCTGACAAGGACGTCCCGAGTTGGACGTTCTCGGATG
GTGCTGAGGTGGACAATAATGGTGATCAGAGCAAACTCAACCGCTCCAATGAAGCCATGCTTAACTTTGCATTCTTGAAA
GGCATGGAGGAGGCCAACAAGTTCTTGCCTAGAGACAACCAACCGCAGGCTGATGTCTTCAGCGTCGACCAAGCGAAAGA
GATTTTTGGGCGAAGCATTAGTGGTGGGGCACGCAAGGGTCAGCGTGATGTGGACAAGCTGGAGGAAGTGGTGGGCAGGT
CCAGCAAACTGCTGATGCCGGAGCTGGAAGAGGATGGCGCCCGCGAGATGATCAACAAAATAATGCTGAATAGTTACGAA
CTATGTGGGGAGACCATGGAGAAGCTGCAAATCACCATGGAGAACATCAGAGCTGATAGAAAAAATAAGAAGGCGGTGCG
GGGAAAGCAGGGAAAGAAAGAGGCGGTGGACCTGCGCGGGCTGTTGCTATGCTGCGCACAGGAGGTGGCCACCGGCAACC
GTCATGGCGCGGGCAATCTGCTGAAACAGATCAGGCAACATGCTTCCGCAACAGGAGATGCCGCTCAGCGGCTGGCGTAT
TGTTTCGCCAAGGGGCTTGAGGCCCGGCTGGCGGGCACTGGGAGCCAGGTGTACAGGTCACTCATGGCGAAGCACACCTC
GACCATGGAGTTCCTCAAAGGTTACGAGCTGTTCATGGCAGCCTGCTCCTTCAAAAGGGTGGCGTTCACATTCTCCAGCA
TGACCATCTTCGATGCCGTGGAAGGGAAGAGCAAGTTGCACATTGTGGATTATGGCTTGCATTATGGGTGCCAGTGGCCG
GGCCTGCTGGCTTGGCTGGCGACTAGGGACGGCGGGCCACCGGAGGTGAGGATCACCGGGATTGACCTCCCGCAGCCCGG
GTTCCGCCCGGCTAAGAGGCTTGAGGAGACAGGGCGGGCACTCAGCAACTGTGCCCGTCAGTTTGGCTTGCCGTTCAAGT
TCCATGCCATCGCGGCCAAGTGGGAGACTATCCGTGCCGAGGACCTCAACATCGACCCTGACGAGGTGCTTGTGGTGAAT
GACCTGTTCAATTTCAACACCTTGATGGACGAGAGCCTTGTTATCGACAGACCCAGCCCCAGGGATGTGGTCCTCAGCAA
CATCCGGGAGATGCAGCCAGATGTGTTCATCCAAGGTGTTGTGAACGGTTCGAGCGGCCCATTTTTCTTGGCGCGGTTTC
GGGAGGCGCTCTTCTTTTACTCATCGGTGTTCGACATGCTTGACGCCACCACACCACCAGATAGCTACCAGCGCTTCGTT
CTCGAGCGGGACATGTTCGGGCAGTGTGCTCTGAATACTATCGCCTGCGAGAGTGCAGACCGGGTAGAGCGTCCTGAGAC
ATACAAACAGTGGCAGCTGAGAAACCAACGTGCAGGCCTCAGACAGCTGCCACTGAAGCCGATTATCACTAAGGTGGCAT
CAGGCAAGGTCAAGAGCCTGTACCACAAGGAGTTTGTTGTGGATGTGGATCAGGGGTGGTTGCTGCAGGGGTGGAAGGGG
CGCATCCTATATGCTCACTCGGCGTGGGTGGCAGACGACACTAGCTCGGAGTATTAGCTGCCTTTTTCTGCATAGGAAAG
G---TTAATG-TTATGGACATTAG-------TATAAGATACAGCTGAGGCATCCCCTCCCGTTTCCTTCAAACATCTTAA
ATTTCGCTCTTAGACACGAATATGAATAACA--CCAGGGTGCCAC-TGCCGCATGC------TAAATGTCTCCTGTAAGC
TGCCTTAAAGTTACATTTTTTTTAGACATTAAGTTTCAATTTTGATGAGTAAAGACTTAATGTAAAGGTCAATTGCTGTT
GCAGCAGCAGATGTTTATGTGCTTCCAGTCA---TTCTTCTTCTTCAGTTATCTCATTAAGACATGATACCCGAAGAAGA
AGATATATAATCTGTAGTCTCGTATAAGAGGACCAATAAATTCAGTGTCATGTGTAAAAGGATTACTGGAAATTGTTCAA
AGAAAAAGGATAACTCAAATGTCTTGAATTTGTAATTTCTTTCTCTGCGTTTTCATCTTACAAATCCGTTTGCCTACTTG
CAGGTGTCCAAGTGTGGAGCAGGA-AAGAAACATAACTGAACATGGTTAAAGGTTACATGCATCTGGAAA--CTGGCTAC
TACTCCCTCCGTTTCTAAATATAGGTCTTTCTAGTGATTTCAACAAGTGACTACATACGGAGCAAAATGAATGAATCTAC
ACTCTAAAGTATGTCTATATACATCCGTATGTGATAGTCCATTTGAAATCTCTAAAAAGACTTATATTTAGGAACGGAGG
GAGTACGTGTGAGCTA-ATCAATTTTCAGGATAATACTAGAGAATTTTC-AATGATTTTACCTGCTAG------TGCTAC
----TACATGTCGAACTCACAACAGCCTGACATTTTAAAAC--ATAAATTGATGTCTACAAGAAAGTTGACTGCTTCTGA
AGTTGTGATCAGACAAGGACAGAATGCTGGCTGCGACAACAAGATGGATATAATCTTTCTCAAGAGCCTCTCTTTGTCCA
TGTGTGCAGGCGCAGGCCGGCCGGCGGACAGTTAAACTAACCTTGTGAGATGTGAAGCTACGATGGTTCCAATAGACAGC
AAC--GTACTGTACGATGTCCGAGGTA-------CTTGTTG--GCTTCACATGAAATGGATGGATGACAG------TGAT
ACATCCACTCCACATCCAATATAGTTTCACTGCACCATCAGAGATCAGCATGCACTCCACTATGGCTGCCACACCGG
>chr4D_2897
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---------------------------------------------------------------TTTTCTGCGTAGGAGAG
G---TTAATGTTTATGGACATTAG-------TATAAGATACAGCTGGGGCATCCCCTCCTGTTTCCTTCAAACATCTTAA
ATTTCGCTGTTAGACACGAATATGAATAACGCCCCAGGGTCCCAC-TGCCGCATGCGCATGCTAAATGTCTCTG--TTGT
TTCCTGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTGTTCAA
AGAAAAATTATAGCTGAAATGTCTTGAATTTGTAATTTCTTTCTCTGCGTTTTCATCTTACAAATCCATTTGCCTACTTG
CAGGTGTCCAAGCGTGGAGCAGGA-AAGAAGCATAACTGAACATGGTTACAGGTTAAATGCATCTAGAAA--CTTGCTAC
TA------------------------------------------------------------------------------
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-----CATGTGAACTATATCAATTTTCAGGATAATACTAGAGATCTTTT-AATGACCTTACCTGCCAGTGCTACTGCTAC
----TACACG-TGAACTCACAACAGCCTGACATTTTAAAAC--ATAAATAGATGTCTACAAGAAAGTTGACCTCTTCTGA
--------T----CAAGGACAGAAGGCTGGCTGTGACAACAAGATGGACATGGTCTTTCTCAAAAGCCTCTCTTTGCCCA
TATGTGCAGAAGCCGGCCGGCCGGCGGATGGTTAAACTAACCTTGTGAAATGTGAAGCTACGATGGTTCCAATAGACAGC
AAC--ATACTGTACGAT-------GTA-------CTTGTTG--GCTTCACATGGAATGGATGGATGGTGTAGGAAATGAT
ATATCCACTCCAAATCCAAGATATTGTCACTGCACCATCAG-GAACAGCATACACTCCACTATGGCCGCCACACCGG
>chr4D_2897
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---------------------------------------------------------------TTTTCTGCGTAGGAGAG
G---TTAATG-TTATGGACATTAG-------TATAAGATACAGCTGTGGCATCCCCTCCTGTTTCCTTCAAACATCTTAA
ATTTCGCTCTTAGACACGAATATGAATAATTCCACAGGGTGCCAC-TGCCGCATGCGCATGCTAAATGTCTCTG--TTGT
TTCCCGC-------------------------------------------------------------------------
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-----------------------------------------------------------------------ATTGTTCAA
AGAAAAATGATAGCTGAAATGTCTTGAATTC--AATTTCTTTCTCTGCGTTCTCATCTTACAAATCCATTTGCCTACTTG
CAGGTGTCCAAGCGTGGAGCAGGA-AAGAAGCATAACTGAACATGGTTACAGGTTAAATGCATCTAGAAAAACTTGCTAC
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---TATATGTGAACTA-ATCAATTTTCAGGATAATACTAGAGATCTTTT-AATGATCTTACCTGCTAG------TGCTAC
----TACACG-TGAACTCACAACAGCCTGCCATTTTAAAACATATAAATTGATGTCTACAAGAAAGTTGCCTGCTTCTGA
--------TCAGACAAGGACAGAAGGCCGGCTGCGACAACAAGATGGATATGGTCTTTCTCAAAACCCTCTCTTTGCCTA
TATGTGCAGAAGCCGGCAGGCCGGCGGATGGTTAAACTAACCATGTGAAATGTGAAGCTACGATGGTTCCAATTGACAGC
AACTCGTACTGTACGAT-------GTA-------CATGTTG--GCTTCACATGGAATGGATGGA----GTAGGAAATGAG
ACATCCTCTCCAAATCCAAGATATTGTCACTGCACCATCAG-GAACAGCATACACTCCACTATGTTTGCCACACCGG
>chr5A_2897
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--------------------------------------------------------------------------------
---------------------------------------------------------------TTTTCTGCGTAGGAGAG
GTTATTAATG-TTATGGACATTAG-------TAAAAGATACAGCTGCGGCATCCCCTCCTGTTTCCTTCAAACATCTTAA
ATTTCGCTCTTAGACACGAATATGAATAATTCCACAGGGTGCCAC-TGCCGCATGCGCATGCTAAATGTCTCTGTCTTGT
TTCCCGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTGTTCAA
AGAAAAATGATAGCTGAAATGTCTTGAATTC--AATTTCTTTCTCTGCGTTCTCATCTTACAAATCCATTTGCCTACTTG
CAGGTGTCCAAGTGTGGAGCAGGA-AAGAAGCATAACTGAACATGGTTACAGGTTAA-TGCATCTAGAAAAACTTGCTAC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TACATGTGAACTA-ATCAATTTTCAGGATAATACTAGAGATCTTTT-AATGATTTTACCTGCTAG------TGCTAC
----TACACG-TGAACTCACAACAGCCTGACATTTTAAAAC--ATAAATTGATGTCTACAAGAAAGTTGCCTGCTTCTGA
--------TCAGACAAGGACAGAAGGCCGGCTGCGACAACAAGATGGATATGGCCTTTCTCAAAAGCATCTCTTTGCCTA
TATGTGTAGAAGCCGGTAGGCCGGTGGATGGTTAAACTAACCATGTGAAATGTGAAGCTACGATGGTTACAATAGACAGC
AAC--GTACTGTACGTT-------GTA-------CATGTTG--GCTTCACATGGAATGGATGGA----GTAGGAAATGAT
ATATCCAATCCAAATCCAAGATATTGTCACTGCACCATCAG-GAACAGCATACACTCCACTATGGCTGCCACACCGG
>chr5A_2897
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---------------------------------------------------------------TTTTCTGCGTAGGAGAG
GTTATTAATG-TTATGGACATTAG-------TATAAGATACAGCTGGGGCATCCCCTCCTGTTTCCTTCAAACATCTTAA
ATTTTGCTCTTAGGCACGAATATGAATAACGCCACAGGGTGCCAC-TGCCACATGC------TAAATGTCTCTC--CGGT
TGCCTGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTGTTCAA
AGAAAAAGGATAACTGAAATATCTTGAATTTGTAATTTCTTTCTCTGCGTTTTCATCTTACAAATCCATTTACCTACTTG
CAGGTGTCCAAGCGTGGAGCAGGA-AAGAAGCATAACTGAACATGGTTACAGGTTAAATGCATCTAGAAAAACTTGCTAC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TACATGTGAACTA-ATCAATTTTCAGGATAATACTAGAGATCTTTT-AATGATCTTACCTGCCAGTGCTACTGCTAC
----TACACG-AGAACTCACAACAGCCTGACATTTTAAAAC--ATAAATAGATGTCTACAAGAAAGTTGACCTCTTCTGA
--------T----CAAGGACAGAAGGCTGGCTGTGACAACAAGATGGACATGGTCTTTCTCAAAGGCCTCTCTTTGCCCA
TATGTGCAGAAGCCGGCCGGCCGGCGGATGGTTAAACTAACCATGTGAAATGTGAAGCTACGATGGTTCCAATAGACAGC
AAC--ATACTGTACGAT-------GTA-------GTTGCTG--TCTTCACATGGAATGGATGGATGGCGTAGGAAATGAT
ATACCCACTTCAAATCCAAGATATTGTCACTGCACCATCAG-GAACAGCATACACTCCACTATGGCTGCCACACCGG
>chr4B_2915
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----TTAATG-TTATGGACATTAG-------TATAAGATACAGCTGGGGCGTCCCCTCCTGTTTCCTTCAAACATCTTAA
ATTTCGCTCTTAGACACGAATATGAATAACGCCATAGGGTGCCAC-TGCCGCATGC------TAAATGTCTCTC--CTGT
TTCCTGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTGTCCAA
AGAAAAAGGATAACTGAAATGTCTTGAATTTGTAGTTTCTTTCTTTGCGTTCTCATCTTACAAATCCATTTGCCTACTTG
CAGGTGTCCAGGCGTGGAGCAGGACAAGAAGCATAACTGAACATGGTTACAGGTTAAATGCATCTAC--AAACTTGCTAC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TACATGTGAACTA-ATCAATTTTCAGGATAATACTAGAGATCTTTTTAGTGATCTTACCTGCTAG------TGCTAC
----TATGCG-TGAACTCACAACAGCCTGACATTTTAAAAC--ATAAATTGATGTCTACAAGAAAGTTGCCTGCTTCTGA
--------TCAGACAAGGACAGAAGGCCGGCTGCGACAGTG---------------------------------------
---GTGCAGAGGCCGGCCGGCCGGTGGATGGTTAAACTAACCTTGTGAAATGTGAAGCTACGATGGTTCCAATAGACAGC
AAC--GTATTGTACGAT-------GTA-------CTTGTTG--GCTTCACATGTAATGGGTGGA----GTAGGAAATGAT
ATATCCAATCTAACTCCAAGATATTGTCACTGCACCATCAGC-AACAGCATACACTCCACTATGGCTGCCACACCGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
S---------S--S------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S---------------------------S--------------------S-----
---------------------------S---S--------------------------------------S-----S---
----------------S-----------------S-------------------------------------S-------
--------------------------------------------------------------------------------
-----SSSSSSSS-----------------------------------------------------------S-------
------SSSSSSSSSS----------------------------------------------------------S-----
--------------------------SSSSSSSSSSSSSSS-----S------------------S--------------
----------------------------------------------------S---------------------------
----------------S-----------------S---------------------------------------------
----------S--------------S---SS-----S-------------------------------------------
-----S------------------S----------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----S-----------------------
-----S--------------------------------------------------------------------------
------------------------------------------S-------SS--S-------------------------
---------------------------------------------------------------S--S-------S-----
----------S--S-S-SSSS--------------------S--------S--------S--------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-------------------------------------------S------------------------------------
-------S-----------------------------S---------------------------------------S--
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---S--------------------------------S--
---------S----------------------------------------------------------------------
---S--S---------S---------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S---S------------S--------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
------S-----------------------S-------------------------------------------------
----------------------------------S------------------------------------------
>forward_59
---------------------------------------TAGCACGGCTGTTGGAGATG---------------------
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>reverse_1257
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--------------------------------------------------------CGGCGACATGGAGAAGATGC----
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_568
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------ACTTCTCCCTTG
TGGTTGCT------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2205
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--------------------------------------------AGTGAGGATCACCGGGATTG----------------
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-----------------------------------------------------------------------------
>forward_1257
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-------------------------------------ACTTACTGTCCGGTGAAGGC-----------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_2996
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------CGATACAGCTGAGGCATCCC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
