>input_sequence_41633
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--------------------------ATGCCCTTGCGGGCGTACGTAGGCATGCTGGCACGCGGAGCCAGGCCTGACGCG
TACACTTTCCCGCCGTTGCTCAAGGTGGTGGCGGCGGAGCGGGGCGCCGTGGCGTCGGCTGCCGGAGATGCTGTCCTCGC
GCATGTGGTTAAGTTTGGGCTGGAGCTCAACGCCCACGTGGCAAGCTCGCTGGTGCTCATGTATGCAGCCAGGGGCGACG
GCGTGACTGCGCGTGCGCTACTGGATGTGCAGCTCGCCAGAGGTGGCGGCACGCCCGTTGTGTGGAATGCGCTCATGTCC
GGTCACAAGAGAAGCAGGCAGTTCAGGCTGTCATGCTGCTCTTTCCAGGATATGGTGAGGGCTGGCATTGTGCCCACGCC
GGTCACCTACATCACGGTGCTGTCAGCATGTGGCAAAGGCAACGACGTCCTGCTCGGAATGCAGCTGCACAAGCGCATCA
TTGAGAGCGGGGTGTTGCCTGACCTCAAGGTGGAGAATGCGCTCGTTGATATGTATGCCGAGTGTGGCGAGATGGAAGCT
GCTTGGGATTTGTTTGAGGGCATGCAGGTGAGGAATATTGTGTCCTGGACGTCGGTAATCTCTGGGTTTGTAAGACTAGG
TCAAGTTGATCGAGCCAAAGTACTGTTTGATCGTATGCCTGAGAGGGACACCGTCTCATGGACTGCAATGATTGATGGTT
ATGTACAAGCTGGCCAGTTCCGAGAGGCATTGGAGATGTTTCGTGAGATGCAACTTAGCAAGGTGAGGGCAGATGAGTTC
ACCATGGTCAGCATAGTCACGGCATGCGCGCAGCTTGGTGCTTTAGAGACAGGGGAGTGGGCTAGAATCTACATGAACAG
ACATGGGATCAACATGGATACTTTTGTCGGGAATGCGCTCATAGACATGTATTCAAAATGTGGGAGCATCGAGCGTGCAT
TGGACGTGTTCAATGAGATGCACAGTAGAGATAAATTTACTTGGACCGCCGTTATACTTGGTCTTGCAGTGAATGGCCAT
GGTGAGGAGGCTATCGATATGTTTGACAGGATGCTTAGGGCGTTTGAAGCTCCAGACGAGGTGACCTTCATTGGCGTTCT
CACTGCCTGTACTCATGCTGGCTTGGTTGAAAAAGGACGAGACTTCTTTCTCAGCATGACTGTGACCTACAGGATTGCTC
CTAATGTGATGCATTATGGATGCATGATCGACCTCCTTGGGCGAGCTGGGAAACTAAGAGAAGCATTGGAGACAATAGGT
AAAATGCCCATGAAACCCAGCTCTGCAATCTGGGGGACCCTGCTGGCAGCTTGTAGGGTTCATGGTAACTCAGAGATAGG
TGAATTGGCAGCAGAACATCTCCTTGAGTTGGATCCAGAGAACAGCATGGCTTACGTCCTTTTGTCCAATCTGTATGCAA
AATCTAATAGATGGGGGGATGTCCGGTGGCTTAGGCAGGTAATGATGGAGAAAGGAATCAAGAAAGAGCCTGGTTGCAGT
CTTATTGAAATGAACGGCACAATTCACGAATTTGTAGCTGGCGATAGATCTCATCCTATGAGCGAAGAAATCTATTCTAA
ATTGGACAAGGTACTCACGGATTTGAAGAATGATGGGTATGTACCTGATGTAACCGAGGTCTTTGTTCAAGTCACAGAAG
AAGAAAAACAAAAAGTTCTTTATTGGCACAGCGAAAAGTTGGCTGTCGCTTTTGCATTACTCGTATCAGAATCCAGCATG
ACAATAAGGATCGTGAAAAACTTGAGGATGTGTTTGGACTGCCACAATGCAATTAAATTGATCACCAAGTTGCATATGAG
AGAGATTGTTGTGAGGGACAGGACACGCTTCCATCATTTTAGACATGGACTCTGCTCTTGTAAGGACTATTGGTAA----
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-------------------------------------------------------
>chr3B_1_TraesCS3B01G143700
ACAATGAACATATATGTCATAAAAATAAAACGGTGAAAGTTGCATGTCAATATGCTTGCTCCGTTCCTAAATACTCCCTC
TAAATATTTGTCTTCTTAGAGACTTTAAATGGACTATCACATACGAGTGTATATAGACATATTTTAGAGTGTAGATTCAC
TCATTTTGCTTCATATGTAGTCACCTGTTGAAATCTCTAAAAAGACAAATATTTAGGAATAGAGTGAGTATAAGTCTTTT
TAGAGATTTTAATATGAAATACTCCGTTCGTCCCAAGATTTTTGTCTTAAATTTTTCTAAATACAGATGTATCTAGTTAA
GCTTTAGTGTTAGATACATCCATATCTAGACAATGTAAGACAAGAATTTTGGGACCGAGGGAATATATATGAAGCAAAAT
GAATGAATGTAAATCTAAACTACGTCTATGTACATTCGTATCCGTATGCAGTGTAAATTGGAATGACTAAAAAGACATTT
ATTTAGAAAGGAGTATATCGGAACGCAGGTGGCGAGGAAGGCGAGGGCTTGGCGGGCAACGCGTGTACGCGAAAAGGGCT
AAGCGAAGTCTTCAATCCCGGATAAGAAAAAGTCTTCATTCCCCGCTGTCCCGCGGCCGGAAGGCCCACCGCTGCCGTCG
GTTGCAGGCCCTGCTCGCCGGAGCGCAGCTCCACGCGAGTACGCGACCACGTCCAGCGACTGACTCCACTCCTGCTCCAC
CGCTCCCGCCGTCGCGATGCGGCGGGACCTCCTCGCTCGCCCGTGTCGTC------------------------GTTCGT
AGACCAGGCGTGCGCA--GCGCCA-CCCCCAGTGCAGTCAATCTCGTCGGCTGATCGTTTCTTTCCCTGCGGCGGCAAAT
CAATCTACCCGCGGTTAACGCGACGATGACGCGGT---------------------------------------GAGGAG
TGCAACGCGGAAGGCTGGCACCCGCATTGCTCTGCGCCCGCGGCCTGTTCGACGGAATTCCCAGCCGGGGCGCCTCACGG
TGGTGGTTCGGCTGCCAGGGCCGAGGATGCCCTTGCGGGCGTACGTAGGCATGCTGGCACGCGGAGCCAGGCCTGACGCG
TACACTTTCCCGCCGTTGCTCAAGGTGGTGGCGGCGGAGCGGGGCGCCGTGGCGTCGGCTGCCGGAGATGCTGTCCTCGC
GCATGTGGTTAAGTTTGGGCTGGAGCTCAACGCCCACGTGGCAAGCTCGCTGGTGCTCATGTATGCAGCCAGGGGCGACG
GCGTGACTGCGCGTGCGCTACTGGATGTGCAGCTCGCCAGAGGTGGCGGCACGCCCGTTGTGTGGAATGCGCTCATGTCC
GGTCACAAGAGAAGCAGGCAGTTCAGGCTGTCATGCTGCTCTTTCCAGGATATGGTGAGGGCTGGCATTGTGCCCACGCC
GGTCACCTACATCACGGTGCTGTCAGCATGTGGCAAAGGCAACGACGTCCTGCTCGGAATGCAGCTGCACAAGCGCATCA
TTGAGAGCGGGGTGTTGCCTGACCTCAAGGTGGAGAATGCGCTCGTTGATATGTATGCCGAGTGTGGCGAGATGGAAGCT
GCTTGGGATTTGTTTGAGGGCATGCAGGTGAGGAATATTGTGTCCTGGACGTCGGTAATCTCTGGGTTTGTAAGACTAGG
TCAAGTTGATCGAGCCAAAGTACTGTTTGATCGTATGCCTGAGAGGGACACCGTCTCATGGACTGCAATGATTGATGGTT
ATGTACAAGCTGGCCAGTTCCGAGAGGCATTGGAGATGTTTCGTGAGATGCAACTTAGCAAGGTGAGGGCAGATGAGTTC
ACCATGGTCAGCATAGTCACGGCATGCGCGCAGCTTGGTGCTTTAGAGACAGGGGAGTGGGCTAGAATCTACATGAACAG
ACATGGGATCAACATGGATACTTTTGTCGGGAATGCGCTCATAGACATGTATTCAAAATGTGGGAGCATCGAGCGTGCAT
TGGACGTGTTCAATGAGATGCACAGTAGAGATAAATTTACTTGGACCGCCGTTATACTTGGTCTTGCAGTGAATGGCCAT
GGTGAGGAGGCTATCGATATGTTTGACAGGATGCTTAGGGCGTTTGAAGCTCCAGACGAGGTGACCTTCATTGGCGTTCT
CACTGCCTGTACTCATGCTGGCTTGGTTGAAAAAGGACGAGACTTCTTTCTCAGCATGACTGTGACCTACAGGATTGCTC
CTAATGTGATGCATTATGGATGCATGATCGACCTCCTTGGGCGAGCTGGGAAACTAAGAGAAGCATTGGAGACAATAGGT
AAAATGCCCATGAAACCCAGCTCTGCAATCTGGGGGACCCTGCTGGCAGCTTGTAGGGTTCATGGTAACTCAGAGATAGG
TGAATTGGCAGCAGAACATCTCCTTGAGTTGGATCCAGAGAACAGCATGGCTTACGTCCTTTTGTCCAATCTGTATGCAA
AATCTAATAGATGGGGGGATGTCCGGTGGCTTAGGCAGGTAATGATGGAGAAAGGAATCAAGAAAGAGCCTGGTTGCAGT
CTTATTGAAATGAACGGCACAATTCACGAATTTGTAGCTGGCGATAGATCTCATCCTATGAGCGAAGAAATCTATTCTAA
ATTGGACAAGGTACTCACGGATTTGAAGAATGATGGGTATGTACCTGATGTAACCGAGGTCTTTGTTCAAGTCACAGAAG
AAGAAAAACAAAAAGTTCTTTATTGGCACAGCGAAAAGTTGGCTGTCGCTTTTGCATTACTCGTATCAGAATCCAGCATG
ACAATAAGGATCGTGAAAAACTTGAGGATGTGTTTGGACTGCCACAATGCAATTAAATTGATCACCAAGTTGCATATGAG
AGAGATTGTTGTGAGGGACAGGACACGCTTCCATCATTTTAGACATGGACTCTGCTCTTGTAAGGACTATTGGTAACTCA
GCATGCATCGATGATGTAAAACAAGGTAATATCAGTTGTCCTAAAGTCTGAGTGATCACTCAATGATTAACAAGCATTTT
TCATTTCAAATGATGCACTGGCTGCAAATCTGTACTTCAGAGGACGAAGTGGTAATTAAAACAATGTTCTCACACCAATG
GAAGCCATACATGTTAAGTTCTCATTTGGGATCATCCCCAAACATCTTGGTCTAATTTTCTCTGTTGCCGAATGATGATT
GTTATATTGACAGTTTGGCGCAACTTCTATTCAAAGAAATGTGAGTTATTGCATGCCATGCAATCTGTATTCTTTTTGCT
GGTTAGATACTAGTAAGTTTTGCTCTGCTCCTCTGAGTGATTTGTTGTTCTTAGACTGTTATTTGAGAGAGGTTCCAATT
TAATTCTTATATTTTATTAGTCCAAAGGAATTTGTCTTGTCTTCTTAATTTTCTTTCACCAACATGTGATACATGATTCA
CTGGCTCTGCAG-AAGTTTCAGTGGGGAAATTCTTTCAGTAACATTATTTTACTTCTGGCCTGAAGCTGATGATCATGTT
GCAACAGCGTTCTGCCATTCACTTGGTAGCAAATCTGGGTGTCTGCTGAAGCTTTACTGTTTGG-------TGCTTAGTG
AAACCAGGTTCGTTCTATTTCCACCAATCTGCAGCTTTCATATGTTCAATCCCGTTGCCTAGTTGGTAGTTGAATTTGTA
ATGAACTCAAAACATTGACCTGCTTTGATTGTAGAATATTTCACCATGCTTGTTCATAGTTGCTCAGTAAATCTTG----
---AAACGTTTTGTGGAACAGCCACTCTATTTAG-ACGCATTTATTTATATCATGGCACAAGTTATTCACACATCCTTGT
GCCCACAGTTGTTAGA---TACCTCCGTATCAAAATATAAGACGTTTTTGCAGTTCAAATTGAAGCGCAAAAACGTCTTA
TATTTTGGTATGAACGGAGTAAATACATACTTTTATCCGAAAAAATATATTTAGA
>chr3D_590
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-----------------------------AAGTGTTCCTTCCCGGCTGTCCCGCGGCCGGAAGGCCCACCGCTGCCGTCG
GTTGCGGGCCCTGCTCGCCGGAGCGCAGCTCCACGCGAGTACGCGACCACGTCCAGCGACCGACTCTACTCCTGCTCCTC
CGCTCCCGTTGCCGCGATGCGGCGGGGCCTCCTCGCTAGCCCGTGTCTTCTAG------TCTGCTGCCGCTGTTGTTCGT
AGACCAGGCGTGCGCG--GCGCCA-CCCCCAGTGCAGTCCATCTCGTCGGCTGACCCTTTCTTTCCCTGCGG---CAAAT
CAATCTACCCGCGGTTAACGAGACGATGCCGCGGTA---------------------------------------AGGAG
TGCG-CGCGGAAGGCTGGCACCCGCATTGCTCTGCGCCCGCGGCCTGTTCGACGGAATTCCCAGCCGGGGCGCCACACGG
TGGTGGTTCGGCTGCCAGGGCCGAGGATGCCCTTGCGGGCGTACGTGGGCATGCTGGCACGCGGAGCCAGGCCTGACGCG
TACACGTTCCCGCCGTTGCTCAAGGCGGCGG---CGGAGCTGGGCGCTGTGCCGCCGTCCGTCGGTGACGCTGTCCACGC
GCATGTGGTTAAGTTTGGGCTGGAGCTCAACGCCCACGTGGCGAGCTCGCTGGTGCTCATGTACGCGGCCAGGGGCGACG
GCGTGACGGCGCGTGCGCTGCTGGATGTGCAGCCCGCCAGTGGTGGCGGCACGCCCGTTGTGTGGAATGCGCTTATGTCC
GGTCACAAGAGAAGCAGGCAATTCAGGCTGTCATGCTGCTCTTTCCTGGATATGATGAGGGCTGGCGTTGTGGCCACGCC
AGTCACCTACATCACGGTGCTGTCAGCATGTGGCAAAGGCAACGACGTCCTGCTCGGAATGCAGTTGCACAAGCGCATCA
TTGAGAGTGGGGTGCTGCCCGATCTCAAGGTGGAGAATGCGCTCGTTGATATGTACGCCGAGTGTGGCCAGATGGAAGCA
GCTTGGGATTTGTTTGAGGGCATGCAGGTGAGGAATATTGTGTCCTGGACGTCGCTAATCTCTGGGTTTGTAAGACTAGG
CCAGGTTGATCGAGCCAGAGTACTGTTTGATCGTATGCCTGAGAGGGACACCGTCTCATGGACTGCAATGATTGATGGTT
ATGTACAAGCTGGCCAGTTCCGAGAGGCATTGGAGATGTTTCGTGAGATGCAACTTAGCAAGGTGAGGGCAGACGAGTTC
ACCATGGTCAGCATAGTCACGGCATGCGCGCAGCTTGGTGCTTTAGAGACAGGGGAGTGGGCTAGAATTTACATGAACAG
ACATGGCATCAAGATGGATACTTTTGTCGGGAATGCGCTCATAGACATGTATTCAAAGTGTGGGAGCATCGAGCGTGCAT
TGGACGTGTTCAATGAGGTGCACAGTAGAGATAAATTTACTTGGACCGCTGTTATACTTGGTCTTGCAGTGAATGGACAT
GGTGAGGAGGCTATCGATATGTTTGACAGGATGCTTAGGGCGTTTGAAGCTCCAGACGAGGTGACCTTCATTGGCGTTCT
CACTGCCTGTACTCATGCTGGCTTGGTTGACAAAGGACGAGACTTCTTTCTCAGCATGACTGGGACCTACAGGATTGCTC
CTAATGTGATGCATTATGGATGCATGATCGACCTCCTTGGCCGAGCTGGGAAACTAAGAGAAGCATTGGAGACAATAGGT
AAAATGCCCATGAAACCCAGCTCTGCAATCTGGGGGACCCTGCTGGCAGCTTGTAGGGTCCATGGTAACTCAGAGATAGG
TGAATTGGCAGCAGAACGTCTCCTTGAGTTGGATCCAGAGAACAGCATGGCTTACGTCCTTTTGTCCAATCTGTATGCAA
AATCTAATAGATGGGGAGATGTCCGGTGGCTTAGGCAGGTAATGATGGAGAAAGGAATCAAGAAAGAGCCTGGTTGCAGT
CTTATTGAAATGAACGGCACAATTCACGAATTTGTAGCTGGTGATAGATCTCATCCTATGAGCGAAGAAATCTATTCTAA
ATTGGACAAGGTACTCACGGATTTGAAGAACGATGGCTATGTACCTGATGTAACCGAGGTCTTTGTTCAAGTCACAGAAG
AAGAAAAACAAAAAGTTCTTTATTGGCACAGCGAAAAGTTGGCTGTCGCTTTTGCATTACTCGTATCAGAATCCAGCGTG
ACAATAAGGATCGTGAAAAACTTGAGGATGTGTTTGGACTGCCACAATGCAATTAAATTGATCACCAAGCTGTATGTGAG
AGAGATTGTTGTGAGGGACAGGACACGCTTCCATCATTTTAGACATGGACTCTGCTCTTGTAAGGACTATTGGTAACTCA
TCATGCATCGATGATGTAAAACAAGGTAATATCAGTTGTCCTAAAGTCTGAGTGATCACTCAATGATTAACAAACATTTT
TCATTTCAAATGATGCACTGGCTGCAAATCTGTACTTCAGAGGACGAAGTGATAATTAAGACAATATTCTCACACCAATG
GAAGCCATATATGTTAAGTTCTCATTTGGGATCATCCCCAAACATCTTGATCTAATCTTCTCTGTTGCCGAATGATGATT
GTTATATTGACAGTTTGGCAGAAGTTCGATGAAAAGAAAGGTGAGTTATAGCATGTCATGCAATCTGTATTCTTTTTGTT
GGTTAGATACTAGTAAGTT--ACTCTGCTCCTCTGAGTAATTTGTTGTTCTTAGACTGTTATTTGAGAGAGGTTCCAATT
CAATTCTTATATTTTATTAGTCCAAAGGAATTTGTCTGGTCTTCTTAATTTTCTTTCACCAACATGTGATACATGATTCA
CTGGCTCTGCAGAAAGTTTCAGTGGGGAAATTCTTTCAGTAACATTATTTAACTTCTGGCCTGAAGTTGATGATCATGGT
GCAACAGCGTTCTGCCATTCACTTGGTAGCAAATCTGGGTGTCTGCTGAAGCTTTACTGTTTGG-------TGCTTAGTG
AAACCAGGTTCGTTCTATTTCCACCAATCTGCAGCTTTCATATGTTCAATCCCGTTGCCTAGTTGGTAATTGAATTTGCA
ATGAACTCAAAACATTGACCTACTTTGATTGTAGACTATTTCACCATGCTTGTTCATAGTTGCTCAGTAAATCTTGAAAG
TTGAAACATTTTATGAAACAGCCACTCTATTTAAAACACATTTATTTACACCATGGTATAAGTTATTCACACACCTTTGT
GCCCACTGTTGTTAGATACTACCTCCGTATCAAAATATAAGACTTTTCTGCAGTTCAAATTGAAGTGCAAAAACGTCTTA
TACTTTGGTACGGAGGGAGT-AATACATACTTTTATCTGGAAAAATATATTTAGA
>chr3D_603
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--------------------------------------------------------------------------------
------------------------------------------CCGCTATCCCGCGGCCGGAAGGCCACCGCTGCT-GTCG
GTTGCCGACCCTGCTCGCCGGAGTGCAGCTCCACGTGAG--------CACGTCCAGCGATAGGCTCCACTCTTGCTCCAC
CGCTCCCGCCGTCGTGATGCGGCGGGACCTCCTCGCTCGCCCGTGTTTTCTAATCTTAATCTGCTACTGCTGTCGTTCGT
AGACCAGACGTGCGCGGTGCGCAA-CCCCCAGTGCAGTCCATCTCGTCGGTA-ATCCTTTCTTTC-------CGGTAAAT
CAATCTACCCGCGGTTAACGCGACGATGGCGCGGT---------------------------------------GAGGAG
TGCG-CGCGGAAGGCTGGCACCCGCAATGCTCTGCGCCCGCGGCCTGTTCGACGGAATTCCCAGCCGGGGCGCCTCGCGG
TGTTGGTTCGGCTGCCAGGGCCGAGGATGCCCTTGCGGGCGTACGTGGGCATGCTGGCACGCGGAGCCAG-CCTGACGCG
TACACGTCCCCGCCGTTGCTCAAGGCGGTGGCAGCGAAGCGGGGCGCCGTGGCGCCGTCCGTCGGAGAGTCTGTCCACGC
GCATGTGGTTAAGTTTGGGCTGGAGCTCAACGCCCACGTGGCGAGCTCGCTGGTGCTCATGTACGCTGCCAGGGGCGACG
GCATGACGGCGCGTGCGCTGCTGGACGTGCAGCCCGCCAGAGGTGGCGGCACGCCTGTTGTGTGGAATGCGCTTATGTCT
GGCCACAAGAGAAGCAGGCAGTTCAGGCTGTCATGCTGCTCATTCCTGGATATTGTGAGGGCTGGCGTTGTGCCCACGCC
GGTCT-CTACATCACGGTGCTGTCAGCATGCGGCAAAGGCAACGACGTCCTGCTCGGAATGCAGCTGCACAAGCGCGTCA
TTGAGAGTGGGGTGCTGCCTGTCCTCAAGGTGGAGAATGCGCTCGTTGATATGTATGCCGAGTGTGGCGAGATGGAAGCA
GCTTGGGATTTGTTTGAGGTCATGCAGGTGAGGAACATTGTGTCCTGGACGTCGGTAATCTGTGGGTGTGTAAGACTAGG
TCAGGTTGATCGAGCCAGAGTACTGTTTGATCGTATGCCTGAGAGGGACACCGTCTCATGGACTGCAATGATTGATGGTT
ATGTACAAGCTGGCCAGTTCCGAGAGGCATTGGAGATGTTTCGTGAGATGCAACTTAGCAAGGTGAGGGCAGATGAGTTC
ACCATGGTCAGCATAGTCACGGCATGCACGCAGCTTGGTGCTTTAGAGACAGGGGAGTGGGCTAGAATTTACATGAACAG
ACATGGGATCAAGATGGATACTTTTGTCGGGAATGCACTCATAGACATGTATTCAAAGTGTGGGAGCATCGAGCGTGCAT
TGGACGTGTTCAATGAGATGCACAGTAGAGATAAATTTACCTGGACCGCTGTTATACTTGGTCTTGCAGTGAATGGCCAT
GGTTTGGAGGCTATCGATATGTTTGACAGGATGCTTAGGGCGTTTGAAGCTCCAGACGAGGTGACCTTCATTGGCGTTCT
CACTGCCTGTACTCATGCTGGCTTGGTTGACAAAGGACGAGACTTCTTTCTCAGCATGACTGTGACCTACAGGATTGCTC
CTAATGTGATGCATTATGGATGCATAATCGACCTCCTTGGCCGAGCTGGGAAACTAAGAGAAGCATTGGAGACAATAGGT
AAAATGCCCATGAAACCCAACTCTGCAATTTGGGGGACCCTGCTGGCAGCTTGTAGGGTCCATGGTAACTCAGAGATAGG
TGAATTGGCAGCAGAACGTCTCCTTGAGTTGGAACCTGAGAACAGCATGGCTTACGTCCTTTTGTCCAACCTGTATGCAA
AATCTAATAGATGGGGAGATGTCCGGTGGCTTAGGCAATTAATGATGGAGAAAGGAATCAAGAAAGAGCCTGGTTGCAGT
CTTATTGAAATGAACGGCACAATTCATGAATTTGTAGCTGGCGATAGATCTCATCCTATGAGCGAAGAAATCTATTCTAA
ATTGGACATGTTACTCATGGATTTGAAGAATGATGGGTATGTACCTGATGTAACCGAGGTCTTTGTTCAAGTCACAGAAG
AAGAAAAACAAAAAGTTCTTTATTGGCACAGCGAGAAGTTGGCTGTCGCTTTTGCATTACTCGTATCAGAATCCAGCGTG
ACAATAAGGATCGTGAAAAACTTGAGGATGTGTTTGGACTGCCACAATGCAATTAAATTGATCACCAAGCTGTATATGAG
AGAGATTGTTGTGAGGGACAGGACACGCTTCCATCATTTTAGACATGGACTCTGCTCTTGTAAGGACTATTGGTAACTCA
TCATGCATCGATGATGTAAAACAAGGTAATATCAGTTGTCCTAAAGTCTGAGTGATCACTCAATGATTAACAAGCATTTT
TCATTTCAAATGATGCACTGGCTGCAAATCTGTACTTCAGAGGACGAAGTGATAATTAAGGCAGTATTCTCACACCAATG
GAAGCCATACATGTTAAGTTCTCATTTGGGATCATCCCCAAACATCTTGGTCTAATCTTCTCTGTTGCTGAATGATGATT
GTTATATTGACAGTTTGGCACAATTTCTGTTAAAACAAAGGTGAGTTATTGCATGTCATGCAATCTGTACTCTTTTTCCT
TGTTAGATACTAGTAAGTTTTACTCTGCTCCTCTCAGTAAGAGATTGTTCTTAGACTGTTATTTGAGAGAGGTTCCAATT
CAATTCTTATATTTTATTAGTCCAAAGGAATTTGTCTGGTCTTCTTAATTTTTTTTCATCAACATGTGATACATGATTCA
CTGGCTCTGCAGAAAGTTTCAGTGGGGAAATTCTTTCAGTAACATTATTTAACTTCTGGCCTGAAGCTGATGATCATGGT
GCAACAGCGTTCTGCCATTCACTTGGTAGCAAATCTGGGTGTCTGCTGAAGCTTTACTGTTTGG-------TGCTTAGTG
AAACCAGGTTCGTTCTATTTCCACCAATCTGCAGCTTTCATATGTTCAATCCCGTTGCCTAGTTGGTAGTTGAATTTGTA
ATGAACTCAAAACGTTGACCTGCTTTGATTGTAGAATATTTCACCATGCTTGTTCATAGTTGCTCAGTAAATCTTG----
---AAACATTTTGTGGAACAGCCACTCTATTTAG-ACGCATTTATTTATACCATTGTATAAGTTATTCACACATCTTTGT
GCCCACAGTTGTTAGA---TACCTCCTTATCAAAATATAGGACATTTTTGCACTTCAACTTGAAGTGCAAAAACGTCTTA
TATTTTGGTACGGAGAGAGTAAATACATACTTTTATCCGAAAAATATATTTAGA-
>chr3A_603
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CCGCTATCCCGCGGCCGGAAGGCCACCGCTGCT-GTTG
GTTGCCGACCCTGCTCGCCGGAGCGCAGCTCCACGTGAG--------CACGTCCAGCGATAGG-----------------
---TCCCTCCGTCGTGATGCGCCGGGACCTCCTCGCTCGCCCGTGTTTTCTAATCT------GCTGCCGCTGTCGTTCGT
AGACCAGACGTGCTCGGTGCGCCACCCCCCAGTGCAGTCCATCTCGTCGGCTCATCCTTCCTTTCCCTGCTGCGGTAAAT
CAATCTACCCGCGGTTAACGCGACGATGCCGCGGTAAATCAATCTACCCGCGTTTAACGCGACGACGGCGCGGTGAGGGG
TGCG-CGGGGAAGGCTGGCACCCGCATTGCTCTGCGCCCGCGGC-TGTTCGACGGAATTCCCAGCC---------CACGG
TGCTGGTTTGGCTGCCAGGGCCGAGGATGCCCTTGCGGGCGTACGTGGGCATGCTGGCACGCGGAGCCAGGCCTGACGCA
TACACGTTCCCGCCGTTGCTCAAGGCGGTGGCGGCGGAGCGGGGTGCTGTGGCGCCGTCCGTCGGAGACTCTGTCCACGC
GCATGTGGTTAAGTTTGGGCTGGAGCTCAACGCCCACGTGGCGAGCTCGCTGGTGCTCATGTACGCTGCCAGGGGCGACG
GCGTGATGGCGCGTGCGCTGCTGGACGTGCAGCCTGCCGGAGGTGGCGGCACGCCCGTTGTGTGGAATGCGCTTATGTCC
GGCCACAAGAGAAGCAGGCAGTTCAGGTTGTCATGCTGCTCATTCCTGGATATGGTGAGGGCTGGCGTTGTGCCCACGCC
GGTCACCTACATCACAGTGCTGTCGGCATGTGGCAAAGGCAACGACGTCCTGCTCGGAATGCAGCTGCACAAGCGCGTCA
TTGAGAGCGGGGTGTTGCCTGACCTCAAGGTGGAGAATGCGCTTGTTGGTATGTATGCCGAGTGTGGCGAGATGGAAGCA
GCTTGGGATTTGTTTGAGGTCATGCAGGTGAGGAACATTGTCTCCTGGACGTCGGTAATCTCTGGGTGTGTAAGACTAGG
CCAGGTTGATCGAGCCAGGGTACTCTTTGATCGTATGCCTGAGAGGGACACCGTCTCATGGACTGCGATGATTGATGGTT
ATGTACAAGCTGGCCAGTTCCGAGAGGCATTGGAGATGTTTCGTGAGATGCAACTTAGCAAGGTGAGGGCAGATGAGTTC
ACCATGGTCAGCATAGTCACGGCATGCGCGCAGCTTGGTGCTTTAGAGACAGGGGAGTGGGCTAGAATTTACATGAACAG
ACATGGGATCAAGATGGATACTTTTGTTGGGAATGCGCTCATAGACATGTATTCAAAGTGTGGGAGCATCGAGAGGGCAA
TGGACGTGTTCAATGAGATGCACAGTAGAGATAAGTTTACTTGGACCGCTATTATACTTGGTCTTGCAGTGAATGGCCAT
GGTGAGGAGGCTATCAATATGTTTGACAGGATGCTTAGGGCGTTTGAAGCTCCAGACGAGGTGACCTTCATTGGCGTTCT
CACTGCCTGTACTCATGCTGGCTTGGTTGACAAAGGACGAGACTTCTTTCTCAGCATGACTGTGACCTACAGGATTGCTC
CTAATGTGATGCATTATGGATGCATGATCGACCTCCTTGGGCGAGCTGGGAAACTAAGAGAAGCATTGGAGACAATAGGT
AAAATGCCCATGAAACCCAGCTCTGCAATCTGGGGGACCCTGCTGGCAGCTTGTAGGGTCCATGGTAACTCAGAGATAGG
TGAATTGGCAGCAGAACGTCTCCTTGAGTTGGATCCAGAGAACAGTATGGCCTACGTCCTTTTGTCCAATCTGTATGCAA
AATCTAATAGATGGGGAGATGTCCGGTGGCTTAGGCAGGTAATGATGGAGAAAGGAATCAAGAAAGAGCCTGGTTGCAGT
CTTATTGAAATGAATGGCACAATTCACGAATTTGTAGCTGGCGATAGATCTCATCCTATGAGCGAAGAAATCTATTCTAA
ATTGGACAAGGTACTCACGGATTTGAAGAATGATGGATATGTACCTGATGTAACCGAGGTCTTTGTTCAAGTCACAGAAG
AAGAAAAACAAAAAGTTCTTTATTGGCACAGCGAAAAGTTGGCTGTCGCTTTTGCATTACTCGTATCAGAATCCAGTGTG
ACAATAAGGATCGTGAAAAACTTGAGGATGTGTTTAGACTGCCACAATGCAATTAAATTGATCACCAAGTTATATATGAG
AGAGATTGTTGTGAGGGACAGGACACGCTTCCATCATTTTAGACATGGACTCTGTTCTTGTAAGGACTATTGGTAACTCA
TCATGCATCGATGATGTAAAACAAGTTAATATCAGTTGTCCTAAAGTCTGAGTGATCACTCAGTGATTAACAAGCATTTT
TTGTTTCAAATGATGCACTGGTTGCAAATCTGTACTTCAGAAGACGAAGTGATAATTAAGACAATATTCTCACACCAATG
GAAGCCATACATGTTAAGTTATCATTTGGGATCATCCCCAAACATCTTGGCCTAATCTTCTCTGTTGCTGAATGATGATT
GTTATATTGACAGTTTGGCGCAACTTCTATTAAAAGAAAGGTGAGTTATTGCATGCCATGCAATCTGTATTCTTTT-GCT
GGTTAGATACTAGTAAGTTTTGCTCTGCTCCTCTCGGTAATTTGTTCTTAGACTG----TATTTGAGAGAGGTTCCAATG
CAATTCTTATA-TTTATTAGTCCAAAGGAATTTGTCTGGTCTTCTAAATTTTCTTTCACCAACATGTGATACATG-----
--------------------------------------------------AACTTCTGGCCTGAAGCTGATGATCATGGT
GCAACAGCGTTCTGCCATTCATTTGGTAGCAAATCTGGGTGTCTGCTGAAGCTTTACTGTTTGGTGCTTACTGCTTAGTG
AAACCAGGTTCGTTCTATTTCCACCAATCTGCAGCTTTCATATGTTCAATCCCGTTGCCTAGTTGGTAGTTGAATTTGTA
ATGAACTCAAAACATTGACCTGCTTTGATTGTAGAATATTTCACCATGCTTGTTCATAGTTGCTCAGTAAATCTTG----
---AAACATTTTGTGGAATAGCCACTCTATTTAG-ATGCATTTATTTATACCATAGTATAAGTTATTCACACATCTCTGT
GCCCACAGTTATTAGA---TACCTCCGTATCAAAATATAAGACGTTTTTGTAGTTCAAATTGAAGTGCAAAAACGTATTA
TTTTTTGGTATGGAGGGAGAAAATACATACTTTTATCCGAAAAAATATATTTAGA
>chr3A_620
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GAAGGCCACCGCCGCT-GTCG
GTTGCCGACCCTGCTCGCCGGAGCGCAGCTCCACGTGAG--------CACGTCCAGCGATAGGCTCCACTCTTCCTCCAC
CGCTCCCGCCGTCGTGACGCGCCGGGACCTCCTCGCTCGCCCGTGTCTTCTAGTCC------GCTGCCGCTGTCGTTCGT
AGACCAGACGTGCGCGGTGCGCCACCCCCCAGTGCAGTCCATCTCGTCGGCTCATCCTTTCTTTCCCTGCAGTGGTAAAT
CAATCTACCCGCGGTTAACGCGACGATGCCGCGGT---------------------------------------GAGGAG
CGCC-CGGGGAAGGCTGGCACCCGCATTGCTCTGCGCCCACGGCCTGTTCGACGGAATTCCCAGCCGGGGCGCCTCGCGG
TGCTGGTTCGGCTGCCAGGGCCGAGGATGCCCTTGCGGGCGTACGTGGGCATGCTGGCACGCGGAGCCAGGCCTGGCGCG
TACACGTTTCCGCCGTTGCTCAAGGCGGTGGTGGCAGAGCGGGGCGCCGTGGCGTCGGCCGCCGGAGACTCTGTCCACGC
GCATGTGGTTAAGTTTGGGCTGCAGCTCAACGCCCACGTGGCGAGCTCGCTGGTCCTCATGTACGCGGCCAGGGGCGACG
GCGTGACGGCGCGCGCACTGCTGGATGTGCAGCCCGCCAGAGGTGGCGGCACGCCCGTCATGTGGAATGCGCTTATGTCC
GGTCAC--------------------------------------------------------------------------
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>chr3A_1298
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---CACAAGAGAAGCAGGCAGTTCAGGCTGTCATGCTGCTCTTTCCTGGATATGGTGAGGGCTGGCATTGTGGCCACGCC
GGTCACCTACATCACGGTGCTGTCAGCATGCGGCCAAGGCAACGACGTCCTGCTCGGAATGCAGCTGCACAAGCGCGTCA
TTGAGAGTGGGGTGTTGCCTGACCTCAAGGTGGAGAATGCGCTCGTTGATATGTATGCCGAGTGTGGAGAGATGGAAGCA
GCTTGGGATTTGTTTGACAGCATGCAGGTGAGGAACATTGTGTCGTGGACATCGGTGATCTATGGGTGTGTAAGACTAGG
CCAGGTTGATCGAGCCAGAGTACTGTTTGATCGTATGCCTGAGAGGGACACCGTCTCATGGACTGCAATGATTGATGGTT
ATGTACAAGCTGGCCAGTTCCGAGAGGCATTGGAGATGTTTCGTGAGATGCAACTTAGCAAGGTGAGGGCAGACGAGTTC
ACCATGGTCAGCATAGTCACGGCATGCGCGCAGCTTGGTGCTTTAGAGACAGGGGAGTGGGCTAGACTTTACATGAACAG
ACATGGGATCAAGATGGATACTTTTGTCGGGAATGCGCTCATAGACATGTATTCAAAGTGTGGGAGCATCGGGAGGGCAA
TGGACGTGTTCAATGAGATGCACAGTAGAGATAAATTTACTTGGACCGCTGTTATACTTGGTCTTGCAGTGAATGGCCAT
GGTGAGGAGGCTATCGATATGTTTGACAGGATGCTTAGGGTGTTTGAAGTTCCAGACGAGGTGACCTTCATTGGCGTTCT
CACTGCATGTACTCATTCTGGTTTGATTGACAAAGGACGAGACTTCTTTCTCAGCATGACTGGGACCTACAGGATTGCTC
CTAATGTGATGCACTATGGATGCATAATCGACCTCCTTGGGCGAGCTGGAAAACTAAGAGAAGCATTGGAGACAATAGGT
AAAATGCCCATGAAACCCAACTCTGCAATTTGGGGGACCCTGCTGGCAGCTTGTAGGGTCCATGGTAACTCAGAGATGGG
TGAATTGGCAGCAGAACGTCTCCTTGAGTTGGATCCTGAGAACAGCATGGCTTACGTCCTTTTGTCCAATCTGTATGCAA
AATCGAATAGATGGGGAGATGTTCGGTGGCTTAGGCAATTAATGATGGAGAAAGGAATCAAGAAAGAGCCTGGTTGCAGT
CTTGTTGAAATGAACGGCACAATTCACGAATTTGTAGCTGGCGATAGATCTCATCCTATGAGTGAAGAAATCTATTCTAA
ATTGGACAAGGTACTCACGGATTTGAAGAATGATGGGTATGTACCTGATGTAACCGAGGTCTTTGTTCAAGTCACAGAAG
AAGAAAAACAAAAAGTTCTTTATTGGCACAGCGAAAAGTTGGCTGTCGCTTTTGCATTACTCGTATCAAAATCCAGCGTG
ACAATAAGGATCGTGAAAAACTTGAGGATGTGTTTGGATTGCCACAATGCAATTAAGTTGATCACCAAGTTATATATGAG
AGAGATTGTTGTGAGAGACAGGACACGCTTCCAACATTTTAGACATGGACTGTGCTCTTGTAAGGACTATTGGTAACCCA
TCATGCATCGATGATGTAAAACAAGGCAATATCAGTTGTCCTAAAGTC---------ACTCAATGATTAACAAGCATTTT
TCATTTCAAATGATGCACTGGCTGCAAATCTGTACTTCTGAGGACGAAGTGATAATTATGACAGTATTCTCACACCAATG
GAGGCCATACATGTGAAGTTCTCATTTGGGATCATCCCCAAACATCTTGGTCTAATCTTCTCTGTTGCTGAATGATGATT
GTTATATTGACAGTTTGGCACAACTTCTATTAAAAGAAAGGTGAGTTATTGCATGTCATGCAATCTGTATTCTTTTT---
------------GTAGGTTTTGCTCTGCTCCTCTGAGTAATTTGTTGTTCTTAGACTGTTATTTGAGAGGGGTTCCAATT
CAATTCTTATATTTTATTAGTCCAAAGGAATTTGTCTGGTCTTCTCAATTTTCTTTCACCAACATGTTATACATGATTCA
CTGGCTCTGCAGAAAGTTTCAGTGGGGAAATTCTTTGAGTAACATTATTTAACTTCTGGCCTGAAGCTGATGATCATTGT
GCAACAGCGTTCTGCCATTCACTTGGTAGCAAATCTGGGTGTTTGCTGAAGCTTTACTGTTTGG-------TGCTTAGTG
AAACCAGGTTCGTTCTATTTCCACCAATCTGCAGCTTTCATATGTTCAATCCCGTTGCCTAGTTGGTAGTTGAATTTGTA
ATGAACTCAAAACATTGACCTGCTTTGATTGTAGAATATTTCACCATTCTTGTTCATAGTTGCTCAGTAAATCTTG----
---AAACATTTTGTGGAACAGCCTCTCTATTTAG-ACGCTC-------------AGTATAAGTTATTCACACATCTTTGT
GCCCACAGCTGTTAGA---TACCTCCGTATCAAAGTATAGGACGTTTTTGCAGTTCACATTGAAGTGCAAAAACGTCTTA
TATTTTGGTACGGAGGGAGTAAATACATACTTTTATCCGAAAAAAATATTTAGA-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---S------------------------------------------
-----S------------------------------------------------------S-------------------
-----------------------------------------------S--------------------------------
---------------S-----------------------S----------------S-----------------------
----------------------------S---------------------------------------------------
---SS---------------------------------------------------------------------------
----------------------------------------------S---------------------------------
-----S-------------------S---------------------------------S--------S-------S---
------------------------------------------S--------------------S--S-------------
-------S-----------S-------------S---------------------------------------S------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
---S-------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
------------S--------------------------------------------S----------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-----------------S--------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
---------------------------------------------------S-------S-----S--------------
--------------------------------------------------------S-----------------------
-------------------------------S-------S----------------------------------------
--------------------------------------S-----------------------------------------
S------------------------------------S------------------------------------------
--------------------------------------------------S---------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------S-----S-S----------------S----
-----------------------------------------------------------------S--------------
------------S-S----------------------------------------
>forward_857
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-------------------------------------TCAATCTCGTCGGCTGATCG-----------------------
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-------------------------------------------------------
>reverse_2497
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----------------GGATGTCCGGTGGCTTAGG---------------------------------------------
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-------------------------------------------------------
>forward_1264
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------GCTCGCTGGTGCTCATGTAT----------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>reverse_3106
--------------------------------------------------------------------------------
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-----------------------------------------------------------------GTTCTCACACCAATG
GAAGCC--------------------------------------------------------------------------
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-------------------------------------------------------
