>input_sequence_41621
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-------------ATGAGTACTGCCAACGGCACACGGCGTGCCTCAAGAAGGCAATCACAAGATGCTGATAAGGTCGTCG
TGAACTTGGTCTCAACCCCCCCAGCGGCGGGCAGCCGTCGTGGAGTATCGACCTCTAACGCTGGCGCGCGCACCTCACCC
ATTGACGTGGAAGCCCTCGAGGATGAAGTGCAGGTCGTATCAGCTTCACAAGTGCCTCCTCAGGTAACTTCGCGAGGCAG
TAAGTTCATAGTGATGTTTAAGGACCATGGTGTATACATTCACTTTTCAAATAGGTTCT---------------------
--------------------------------------------------------------GTACTTCC----------
------------------TATTGAGGAAGAGTATTATAACTTGGTTATTACATGAATATGATACATCATTTCTGGCATTT
ATATTGAGTCTTCTTGCATTTTGCAGAGGAGGAACCGGAGACCTAGGAGGCAGCCTGTGACAGTAGTTGATCTCGATGTA
CATGCTACCCGGCAAGGTTAATTCGCTACTTAGTCTTACTATGTTGCATTCTGTAGAGTTATTTTGGCTTCTAACATTAC
GGAAATTGTTTGGTATATTCTT-CATCATTCTATTATCATCTGCCTAATCAATTCTTCTGGAATTATCCAATTTATAAAA
AATCACCTATATCATGCTGCTAAGATGACCGTAAGTGCTGATTATACAATGTGACATAAGTTTACTTTCTAGTGGGAACA
GACATATATAAGCTATGCTGAAAATTGGACCCGTGGCTTTCTTTTGTGGCTAATTTCCTATATAATAACTTCATGTTGCA
ACGCGATACATATATATTGATGCTGACTCTGGAAACCACAGCTGGAAGTTGTAAAATACTCCTTCCGTCCCAAAATAAG-
-----------------------------------------------GAGGGAGTATTTGTCAATATGCTGTATGACTAT
ATATCACTGTCATTTAAGCCTCCTTATCTGCCTCATTGTTTATTCAATCAGGAGTTTCTCATGATGATAATGCAACAGTG
CTTTCTCCTAACACAAGGAACAAACGCCCAAGAGTTGCTCCTGTAATAGACATCTCTCCAGAAACAGGAGAAGGGTCCAG
CTTACAGGTATTTAATTTTTTTTGAAGGGATTAAATCCTCTTAGCTTTGAGTCCAGTTTGATGAATGATTAGTGATTACT
TATTAGTTGTTCTCTACTTTGTCCTTTATGTGAATAACAGCTGACATCTAGTGCACGATGCACCCCTTTGTTTGTTCTAT
AGAGTTTGGCATTATGTTGCCCTTTTAGTGGACTAAGGGTGTAACTATGTTTGATTAAGTTGAAAGAATTTCTCGTTGTA
TGTTCAAGTCATACTTGCAGTTCTCTGATGATGTCACATAGACCTGTCCAGATTGTTCTCGACTGGCCAACGGTTAAGAC
TCTTGGTC-GCACTGAAAATTTAGCAATTGTTAAATTTCAAGAAGCATTTTGCCGTCTGTTATGTAGGTACAGTGTACTA
ACATGTTTACTTTATACCCCCTCCGTCCCAAAATAAGTGTCCA--CTTTGTACTA-------------AAGTTGAGACAC
TTATTTTAGAACGGAGGGAGTAGTTTATAACTTACGCTATAGGATATTTTTCATCTAAGAAAGCTGCTCTATACATTCAA
TCCCGGCGTCCAGTTCCTACTAGCATGTTGCCTCGTGATTTGTGCTAAACTCTGGCTACCTGCGTTTTCATTC-TTGGCA
GTCAAAAAATGCGGGGAAAACTAGCAAAGAGCATCTGAATGTGGCTCCAAAGGAACCCATCTTCACCTGCCCGGTGTGTT
GGAACAAGTTGGATGAGCCAGCCACAACAATGTGCGGCCACATCTTCTGCACAAACTGCATAAAGCAAGCCATCCAGTTC
CAGAAGAAATGTCCTACCTGCCGGAAGCACCTGAAGATGAACAATTTCCATCGCATTTACCTTCCTAACACCTCCCGTTA
A-------------------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G289400
GGTCTCGCGGCGCAGCCGCCATGGACCG----CTCCCTGTAACCTACCAAAAATTTCAACGACCCGTCACACTGGAAACG
GGCCCCCAGAAAAGGCAGGCCGCACACAGACGTG------GGCCAAGATAGCGGGCCCTGACAGGCGGGGCCCAAATG-G
GGAAG----AGACGTGTGTGCCTTTTTATCGCGAGACCTCGTCTTCAACCCCCTTTCGCATCCTTTTCATTCAAAACAGG
CAGGGCAGGGAGAG------------------------------------------------------------------
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GGGAGGA------GGTGGAGGCGCCGAGCGAAGGAAAAAAA-ATCAAGTGCACTCGTCG-----GCGGCGCGGCGCGGCG
GCTGCCTCCTCTGCTCGTCCGATCGAGCT-CGCTTCGTCGGGTGAGCGCGGTACGTCCCCCTGTCTCGGCGCGTATCTTC
TCTGCTCGTGGCGATTTCCGCTGGATTTGCCTCCGCGGTAGGCGCCGATCCAGCGAGGTAGTTGCGGGTCGGGAGCTGTT
CTTCGATTGGGTCCCCGCGCGGCTTCCCCGACGATTCTGAGGCGGAATTCGTCCATTTCTAGCCAGATTCGCCGTCGATT
CGGTGCGGCTACCTTAGGAATTGGGAAATCGGGGGCATCTGTGCGCTTGCTGTCCTGCTCGTTTCGTGCTCTAGCTCGCA
GACGGGTCTCCGGCTTGATCGTT-----------------CCATGGTGATG--------GTCCCCGGCTGCGGGATTCAG
CAAGTCGTTAGGTTTATGCCCCGATTTTGTTACTGCTCGTGGTT-CTGTTCACTGCCCCAGTTGGGACTTCTT-TTTTTA
GTTCAAATTTCGTCACGAACGAGTGGTTGGATTTCGCATTGTTGGTCCTCGGTAGCTTTGTCGAGATGGTCCAAAGTTTG
-------ATCTGAGCATCGATGTCCTTGATTTATT--TATACTGCA--AAGATGGTCACAGGGTAAAA-TGCTTGCTGAT
AGTTGGCACTTGACAGATAGTTTATCGTAAAAGCAAGTAACTGTTGAATCACATCTCTTTCAGTCTCAGGTCGATTCGGG
AGCTGAAGGGAGCATGAGTACTGCCAACGGCACACGGCGTGCCTCAAGAAGGCAATCACAAGATGCTGATAAGGTCGTCG
TGAACTTGGTCTCAACCCCCCCAGCGGCGGGCAGCCGTCGTGGAGTATCGACCTCTAACGCTGGCGCGCGCACCTCACCC
ATTGACGTGGAAGCCCTCGAGGATGAAGTGCAGGTCGTATCAGCTTCACAAGTGCCTCCTCAGGTAACTTCGCGAGGCAG
TAAGTTCATAGTGATGTTTAAGGACCATGGTGTATACATTCACTTTTCAAATAGGTTCT---------------------
--------------------------------------------------------------GTACTTCC----------
------------------TATTGAGGAAGAGTATTATAACTTGGTTATTACATGAATATGATACATCATTTCTGGCATTT
ATATTGAGTCTTCTTGCATTTTGCAGAGGAGGAACCGGAGACCTAGGAGGCAGCCTGTGACAGTAGTTGATCTCGATGTA
CATGCTACCCGGCAAGGTTAATTCGCTACTTAGTCTTACTATGTTGCATTCTGTAGAGTTATTTTGGCTTCTAACATTAC
GGAAATTGTTTGGTATATTCTT-CATCATTCTATTATCATCTGCCTAATCAATTCTTCTGGAATTATCCAATTTATAAAA
AATCACCTATATCATGCTGCTAAGATGACCGTAAGTGCTGATTATACAATGTGACATAAGTTTACTTTCTAGTGGGAACA
GACATATATAAGCTATGCTGAAAATTGGACCCGTGGCTTTCTTTTGTGGCTAATTTCCTATATAATAACTTCATGTTGCA
ACGCGATACATATATATTGATGCTGACTCTGGAAACCACAGCTGGAAGTTGTAAAATACTCCTTCCGTCCCAAAATAAG-
-----------------------------------------------GAGGGAGTATTTGTCAATATGCTGTATGACTAT
ATATCACTGTCATTTAAGCCTCCTTATCTGCCTCATTGTTTATTCAATCAGGAGTTTCTCATGATGATAATGCAACAGTG
CTTTCTCCTAACACAAGGAACAAACGCCCAAGAGTTGCTCCTGTAATAGACATCTCTCCAGAAACAGGAGAAGGGTCCAG
CTTACAGGTATTTAATTTTTTTTGAAGGGATTAAATCCTCTTAGCTTTGAGTCCAGTTTGATGAATGATTAGTGATTACT
TATTAGTTGTTCTCTACTTTGTCCTTTATGTGAATAACAGCTGACATCTAGTGCACGATGCACCCCTTTGTTTGTTCTAT
AGAGTTTGGCATTATGTTGCCCTTTTAGTGGACTAAGGGTGTAACTATGTTTGATTAAGTTGAAAGAATTTCTCGTTGTA
TGTTCAAGTCATACTTGCAGTTCTCTGATGATGTCACATAGACCTGTCCAGATTGTTCTCGACTGGCCAACGGTTAAGAC
TCTTGGTC-GCACTGAAAATTTAGCAATTGTTAAATTTCAAGAAGCATTTTGCCGTCTGTTATGTAGGTACAGTGTACTA
ACATGTTTACTTTATACCCCCTCCGTCCCAAAATAAGTGTCCA--CTTTGTACTA-------------AAGTTGAGACAC
TTATTTTAGAACGGAGGGAGTAGTTTATAACTTACGCTATAGGATATTTTTCATCTAAGAAAGCTGCTCTATACATTCAA
TCCCGGCGTCCAGTTCCTACTAGCATGTTGCCTCGTGATTTGTGCTAAACTCTGGCTACCTGCGTTTTCATTC-TTGGCA
GTCAAAAAATGCGGGGAAAACTAGCAAAGAGCATCTGAATGTGGCTCCAAAGGAACCCATCTTCACCTGCCCGGTGTGTT
GGAACAAGTTGGATGAGCCAGCCACAACAATGTGCGGCCACATCTTCTGCACAAACTGCATAAAGCAAGCCATCCAGTTC
CAGAAGAAATGTCCTACCTGCCGGAAGCACCTGAAGATGAACAATTTCCATCGCATTTACCTTCCTAACACCTCCCGTTA
AGGTGAGCCCTTTCAGTTTCTATACGCCATAATCTGTTGAGCTTCAATTTCATCAGATACAGGTCCGTTTGATGTGTTAA
ACTGAACCTCTGACTTTGAAATCTATTGTCAGGGTCAGGAGTCCTCCCAGGGAGAACCATGGTGGATCTTCTGCTGGGGA
GCATTGTGTACCATCATCACCTAGATGAATGTATGGGAATGGGTCGGTAGGAGTTCATCGTCCTGATGACCGGACTGGAT
AACCTTCTGCCTGAAATGGGG-------------------------------------------TTAACCTGATAAACAG
AGTGGATAGCT---TTCTGCCTGAAATGGGTTTAACAAATTTGCCTGTAGCCTTCCATTATATTGTTTGCGGCAACTTAA
AAATGTTGTATGTATTAGGCTAATAGCCTTGTACCCTTTTCTTCTCCATAGTTGGTCGATGTAACTGCGT----------
----------------TTTGGTATTTCTGTTCAGTGCCGTGCTATGTTCTGAAGTGACTGCCCTGGCATTTTATCAGC--
------TGCCCAGG-TAGGTATGGCTGAGGACGTAGATGATCTTGTCCCCAGGGGAACTTCACA----------------
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------------------------------------------------GTCATGCCAACAAGCAGACACACTGAAGTAAT
TTTGTTTTGTAAATACAACAGTTATAAATGTCAAGAATCACAGACTATTACAAGCGCATCCAAAACTATTCCCTATCATC
ATGGGTTTCTTCATTCTGA---------------------------TCACTTGCAATATTAG-TCTAAGAATTTACTATT
AACTAGAACAACATCTACTTTAGGCCTTTGCTGGCAGCTTGTTCATTATGGGGCTGATCTTTTCATCAGAGAGACCCCTT
TGGGGGTCAACCTTGTAGGTTTCGTAGAAGTCCAGTATTTCCATTGAAATATTCTTCACCTGGGTATTGCAAATGAATCT
CGATCAATTGGATGGGTATTATGAGGGGGAAGGGGGGTGGGGAGTATTCACAAACATGCGCTTACAATGTTCATATCAAC
ATGAAGTTCTTCAAACCATGAAGTTGTATCCTTATCTTTAAGAACACTGGCAAT
>chr5A_1
GGTCTCGCGCCGCGGCCGCCATGGACAGACAGCTCCGCAACACTGG----AAAATTCAACGTCCCGTCACACTGGAAACG
GGCCCCCAAAAGAGGTAGGCTCCACGCACACGTGGGCCAAGGCCAAGATAGCGGGCCCTGACAGGCGGGGCCCAAAATAG
GGAAG----AGACGTATCTTCCTTTTTATCGCGAGACCTCGTCTTCT-CCCCCTTTCGCATCCTTTTCATTCAAAACAGG
CAGGGCAGGGAGAG------------------------------------------------------------------
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GGGAGGAGGTGGAGGAGGAAGCGCCGAGCGAAGAAAAAAAATCGAGTGAGCGGGC--CG-----GCGGCGCGGCGCGGCG
GCTGCCTTCTCTGCGCGTCCGGTCGAGCT-CGGTTCGTCGGGTGAGCGCGGTACGTCCCCCCA---------------TC
TCCGCTCGTGTCGATTTGCGCTGGATTTGCCTCCGCGGTAGGCGCCGATCCAGCGAGGTAGTTGCGGGCGACGAGCTGTT
CTTCGACTCGTCCCCCAAG--------CCGACGGTCCCTGGGTCGAATTCCTCCATTTCTTGGCAGATTCGCCGTCGATT
CGGTGCGGCTACCTTAGGAATTGGG-AATCAGGGGCATCTGTGCGTGCGCTGTACTGCTCGTTTCGTGCTCTGGCTCGTG
GACGGGTCTCCGGCTTGATCCGTCCTACGGTTGCTGAGGGTCGTGGTGATGATC--------------------------
-----------------CCCCCGATTTTGTTACTGCTCGTGGTT-CAGTTCACTGCCCCAGATGGGACTTCTTTTTTTTA
GTTCAAATTTCGTCAAGAACGTGTGGTTGGATTTTGCATTGTTGGCCCTCGGTAGCTTTGTCGAGATGGTCCAAAGTTTG
ATCTGACATCTGAGCATCGTTGTCCTTGATTTATT--TATACTGCTATAAGATGGTCACAGGGTAAAA-TGCTTGCTGAT
AGTTGACACTTGACAGATAGTTTGTGGTAAAAGCAAGTAACTGTTGAATCACGTCTCTTTCACTCTCAGGTCGATTCAAG
AGCTTAAGGGAGCATGAGTACTGCCAACGGCACACGGCGTGCCTCCAGAAGGCAATCACAAGATGCTGATAAGGTCGTCG
TGAACTTGGTCTCAACCCCCCCAGCGGCGGGCAGCCGACGTGGAGTATCGACCTCTAACGCTGGCGCGCGCACCTCACCC
ATTGATGTGGAAGCCCTCGAGGATGAAGTGCAGGTCGTATCAGCTTCACAAGTGCCTCCTCAGGTAACTTCGCGAGGCAG
TAAGCTCGTAGTGATGTTTAAGGACCATGGTGTATACATTCACTTTTCAAATAGGTTTTGTACTCCCTCTGTAAACTAAT
ATAAGAGCGTTTAGATCACTACTTTAGTATTCTAAACGCTCTTATATTAGTTTACGGTGGGAGTACTTCTTATGATTCTG
ACGCACACAAGCTCTTCATATTGAGGAAGAGTATTACAACTTGGTTATTACATGAATGTGATGCACCATTTCTGGCATTT
ATATCGAGTCTTCTTGCATTTTGCAGAGGAGGAACCGGAGACCCAGGAGGCAGCCTGTGACAGTAGTTGATCTCGATGTA
CATGCTATCCGGCAAGGTTAGTTCGCTACTTAGTCTTACTATGTTGCATTCTGTAGAGTTGTTTTGGCTTCTAACATTAC
GGAAATTGTTTGGTATATTCTT-CATCATTCTATTATCATCTGCCTAATCAATTCTTCTGGAATTATCCAATTTATAAAA
AATCACCTATATCATGCTGCTATGATGACCGTAAGTGCTGATTATACAATGTGACATAAGTTTGCTTTCTAGTGGGAACA
GACATATATAAGCTATGCTGAAAATTGGACCC-------------GTGGCTAATTTCCTATATAATAACTTCCTGTTGCA
ACGTGATACATATATATTGATGCTGACTCTGGAAACCACAACTGGAAGTTGTAAAATATTCCCTCCGTCCCAAAATAAAG
GACTCA--------------------------ACTTATTTTGGGACAGAGCGAGTATTTGTCAATATGCTATCTGACTAT
ATATCACTGTCATTTAAGCCTCCTTATCTGCCTCATTGTTTATTCAATCAGGAGTGTCTCATGATGATAATGCAACAGTG
CTTTCTCATAACACAAGGAACAAACGCCCAAGAGTTTCCCCTGTAATAAACATCTCTCCAGAAACAGGAGAAGGGTCCAG
CTTACAGGTATTTAATTTTTTTTGAAGGGATTAAACTCTCTTAGCTTTAAGTCCAGTTTGATGAATGATTAGTGATTACT
TATTAGTTGTTCTCTACTTTGTCCTTTATGTGAATAACAGCTGGTATCTAGTGCACGATGCACCCCTTTGTTCGTTCTAT
AGAGTTTTGCATTATGTTGTCCTTTTAGTGGACTAAGGGTGTAACTATGTTTGATTAAGTTGAAAGAATTTCTCGTTGTA
TGTTT--GTCATACTTGCAGTTCTCTGATGATGTCATATAGACCTGTCCAGGTTGTTCTCGAGTGGCCAACGGTTAAGAC
TCTTGGTTGGCACTGAAAATTTCGTAATTGTTAAATTTCAAGAAGCATTTTGCCATCTGTTATGTAGGTGCAGTGTACTA
ACATGTTTACCTTATACTCCCTCCGTCCTAAAATAAGTGTCTCTGCTTTGTACTAACTTTAGTACAACAAGTTGAGACAC
TTATTTTAGGACGGAGGGAGTAGTTTATACCTTATGCTATAGGATATTTCCAC-CTAAGAAAGCTGCTCTATACATTCCA
TCCTGCCTTCCAGTTCCTACTAGCATGTTGCCTCGTGATTTGTGCTAAACTCTAGCTACCTGCGTTCCCATTC-TTGGCA
GTCAAAAAATGCGGGGAAAACTAGCAAAGAGCCTGTGAAGGTGGCTCCAAAGGAACCCATCTTCACCTGCCCGGTGTGTT
GGAACAAGTTGGACGAGCCCGCCACAACAATGTGCGGCCACATCTTCTGTACAAACTGCATCAAGCAAGCCATCCAGTAC
CAGAAGAAATGTCCTACCTGCCGGAAGCACCTGAAGATGAACAATTTCCATCGCATTTACCTTCCTAACACCTCCCGTTA
AGGTGAGCCCTTTCAGTTTCTATACACCTTAATCTGTTGAGCTTCAATTTCATCAGATACAGGTCCGTTCGATGTGTTAA
AATGAACCTCTGACTTTGAAATCTATCGTCAGGGTCAGGAGTCCTCCCAGGGAGAACCATGGTGGATCTTCTGCTTGGGA
GCATTGTGTATCATCATCACCTAGATGAATGTATGGAAATGGGTCGGTAGGAGTTCATCGTCCTGATGACCGGACTGGAT
AACCTTCTGCCTGAAATGGGTTAACCTGATAAAGATAGTGGATAGCCTTCTGCCTGAAATGGGTTTAACCTGATAAACAG
AGTGGATAGCCTTCTTCTGCCTGAAATGGGTTTTACAAATTTGCCTGTAGCCTTCTG-TATATTGTTTGCGGCAACTTAA
AAATGTTGTATGTATTAGGCTAATAGCCTTGTACCCTTCTCTTCTCCATAGTTGGTCGATGTAACTGCATCTGAGGTTGC
ACA-------------TTTGGTATTTCTGTTCAGTGCCGTGCTATGTTCTGAAGTGGCTGCCCTGGCATTTTATCAGCTA
CCATACTGCCCAGGGTAGGTATGGCTGAGGACGTAG----------------GGGAACTTCATAGTCCTGCCAGGGAAAA
TATCTAGTGCTACCGTCAATTAGGTGATACGGTGCTACAGGTCTGCTGGGGCCGTTAGATCTGTAGGGAATGGTCTTGAT
CAACTCAACCTGCTGTTTACCTGTGCCCCCTAGAACATTTGCATCCTGCCCCTCAAAAGAAGCATGTGTTTGCAAAATCT
ACTATATCTCATTCAAGCTGTGGTCTGGCTAAGTGCAGTACAGTATCGGTACATGTTGACCGACTAGGTGCTTGATAACT
ACTCCCTCTGTTTCAAATTATTTGGCGCAAAAATGGATATATTTAGAACTAAAATACATCTAGATAATTCGAAACGGAGG
GAGTAATAAATACATCAAATATTCAATCGGCAACTCCAGAGGAGGTGAGAATCATTAACAGAACTGGTACATAAAACCAA
CGAAATCAAACTTACGCACTTTCAACACCTACAAGCGAGAATCAGTGTTTAATTCATATAGAGTTGAGTTCCAAAATGCT
AGAAAAAACATTCCTGCACAATTTTGCCACATACATCCTTCCACGTCAAGACCAGGCAACAACGAATATTAAGTGAAGCA
AATAAAATCCTACAAGCAAAACTAATCATGCTGCTTTGATTCAACTGAAATATAAGCAACAAGAGCATGCAAAACAGAGG
AGATTACACAACACTAATAGCACCTTCAGGAAGCACGTAGGTGTCCAGTAAAGCAAACCACAGGCCTGGCCCAGAACCGC
CAATACATTCAGCACCGCTGCTGGAAGATGCGGAATGAGCTCCAACCTCCGTGGCTGGCGCTGAGAAATTGACTTGTAAC
TCTAGATTGAGCGTGGTTGGCGGCGGCGCCTGGAAATGTCCTATGGTGGCCGCCCGTGCCGGCAAGGTCGTCACCGTGGT
ACACTCGAGTGGCTCGGACAGGAATCGACCGAACGACACCGACTTCCGCAGCGCAAACATCCAATCCAAAAATCAAATAA
GAAAAATCACGAAATCGAACACGAGAAAACGCCCCAGATGCGTACGACGAAGGAGGCGATGTCTCTTACCCGATCGTTGT
TGCGTAGGGTCTCCGGCCCCCGCGATGCGGTCGGCTCCAGCGACGGCTCCCATAAAAATGACCGGATGTGAGCGAAGGAA
TCAACACGCGCGAGAGCCGAGAGAGCCCTATAATCTGCGCTGGATCGGAACTAGCAGGGTGGATGGGGGCATGCCACGGT
GGCCGGCGGCGATGCAAATCGATTGAGGAAGAGGCGAACAGGGAAGAAGGATTTGCAGCTCGTCACTGGTTTGTAGAATA
AACGAGGGTGCCTTCTGCATAATTTGCAACGCGAAGTGAGCCTACTCAATCCTGTTCCTCCAGTTCAGATCCAACGCTTA
CCATGCTCTCGGATAAGGGGAGCATGTACTGTAGCCGTATCACCAGACGTCATGCCAACAAGCACACACACTGAAGTAAT
TTTGTTTTGTAAATACAACAGTTATAAATGTCAAGTATCACAGACTATCACAAGCGCATCCAAACTATTCCCT----ATC
ATGGGTTTCTTCATTCTGAAAAGATGCATCACAATTGATCCGCTGACCACTTGCAATATTAGGCCTAAGAATTTACTATT
AACTAG---AACATCTACTTTAGGCCTTTGCTGGCAGCTTGTTCATTATGGGGCTGATCTTTTCGTCAGAGAGCCCCCTT
TGGGGGTCAACCTTGTAGGTTTCGTAGAAGTCCAGCATTTCCATTGAAATATTCTTCACCTGGGTATTGCAAATGAATCT
CGATCAATTTGATGGGTATTGTGAGGGGGAAAGGGGGTG-------TTCACAAACATGCGCTCACAATGTTCATATCAAC
ATGAAGTTCTTCAAACCATGAAGTTGTATCCTTATCTTTAAGAACACTGGCAAT
>chr5B_1
GGTCTCGCGCCGCGGCCGCCATGGACAG----CTCCGCAACACTGG----AAAATTCAACGTCCCGTCACACTGGAAACG
GGCCCCCAAAAGAGGCAGGCCCCACACGGACGTG------GGCCAAGATAGCGGGCCCTGACAGGCGGGGCCCAAATG-G
GGAAGAGACAGACGTGTTCGCCTTTTTATCGCGAGACCTCGTCTCCT-CCCCCTTTCGCATCCTTTTCATTCAAAACAGG
CAGGGCAGGGAGAG------------------------------------------------------------------
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GGGAGGA------GGTGGAGGCGCCGAGCGAAGGAAAAAAAAATCGAGTGCACTCGTCGGCGGCGCGGCGCGGCGCGGCG
GCCGCCTCCTCTGCTCGTCCGATCGAGCTCCGGTTCGTCGGGTGAGCGCGGTACGTCCCCCCGTCTCGGCGCGTATCTTC
TCCGCTCGTGGCGATTTCCGCTGGATTTGCCCCA----TAGGCGCCGATCCAGCGAGGTAGTTGCGGGTCGGGAGCTGTT
CTTCGATTGGGTCCCCGCGCGGGTTCCCCGACGATTCTGAGGCGGAATTCGTCCACTCCTAGCCAGATTCGCCGTCGATT
CGGTGCGGCTACCGTAGGAATCGGGAAATCAGGGGCATCTCTGCGTGCGCTGTCCTGCTAGTTTCGTGCTCTAGCTCGCT
GC---------------------CCTACGGTTGCTGAGGGTCGTGGTGATG--------GTCCCCGGCTGTGGGATTCAG
CAAGTCGTTGGGTTTATCCCCCGATTTTGTTACTGCTCGTGGTTTCAGTTCACTGCCCCGGATGGGACTTCTTTTTTTTA
GTTCAAATTTCGTCACGAACGAGTGGTTGGATTTTGCATTGTTGGTCATCGGTAGCTTTGTCGAGACGGTCCAAAGTTTG
-------ATCTGAGCATCGATGTCCTTGATTTATGTATATACTGCA--AAGATGGTCACAGGGTAAAA-TGCTTGCTGAT
AGTTGGCACTTGACAGATAGTTTATCGTAAAAGCAAGTAACTGTTGAATCACATCTCTTTCAGTCTCAGGTCGATTCGGG
AGCTGAAGGGAGCATGAGTACTGCCAACGGCACACGACGTGCCTCAAGAAGGCAATCACAAGATGCTGATAAGGTTGTCG
TGAACTTGGTCTCAACCCCCCCAGCGGCGGGCAGCCGTCGTGGAGTATCAACATCTAACGCTGGCGCGCGCACCTCACCC
ATTGACGTGGAAGCCCTCGAGGATGAAGTGCAGGTCGTATCAGCTTCACAAGTGCCTCCTCAGGTAACTTCGCGAGGCAG
TAAGTTCATAATGATGTTTAAGGACCATGGTGTATACATTCACTTTTCAAATAGGTTTT---------------------
--------------------------------------------------------------GTACTTCTTATGATTCTG
ACGCACACAAGCTCTTCATATTGAGGAAGAGTATTACAAGTTGGTTGTTACATGAATGTGATGCATCATTTCTGGCATTT
ATATTGAGTCATCTTGCATTTTGCAGAGGAGGAACCGCAGAACTAGGAGGCAGCCTGTGACTGTAGTTGATCTAGATGTA
CATGCTACCCGGCAAGGTTAGTTCGCTACTTAGTCTTACTATGTTGCATTCAGTAGAGTTGTTTTGGCTTCTAACATTAC
GGAAATTGTTTGGTATATTCTTCCATCATTCTATTATGATCTGCCTAATCAATTCTTCTGGAACTATCCAATTTATCAAA
AATCACCTATATCATGCTGCTAAGATGACCGTAAGTGCTGATTATACCATGTGACATAAGTTTACTTTCTAGTGGGAATA
GACATATATGAGCTATGCTGAAAATTGGACCCGTGGCTTTCTTTTGTGGCTAATTTCCTGTATAATAACTTCCTGTTGCA
ACGTGATACATATATATTGATGCTGACTCCGGAAACCACAACTGGAAGTTGTAAAATACTCCCTCTGTCCCAAAATAAGT
GACTCAACTTTGTACTAGTACAAAGTTGAGTCACTTATTTTGGGACAGAGGGAGTATTTGTCAATATGCTGTCTGACTAT
ATATCACTGTCACTTAAGCCTCCTGATCTGCCTCATTGTTTATTCAATCAGGAGTGTCTCATGATGATAATGCAACAGTG
CTTTCTCATAACACAAGGAACAAACGCCCAAGAGTTTCCCCTGTAATAAACATCTCTCCTGAAACAGGAGAAGGGTCCAG
CTTACAGGTATTTAAATTTTTTTGAAGGGATTAAACTCTCTTAGCTTTAAGTCCAGTTTGATGAATGATTAGTGATTACT
TACTAGTTGTTCTCTACTTTGTCCTTTATGTGAATAACAGCTGGTATCTAGTGCATGATGCACCCCTTTGTTCGTTCTAT
AGAGTTTTGCATTATATTGTCCTTTTAGTGGACTAAGGGTGTAACTATGTTTGATCAAGTTGAAAGAATTTCTCGTTGTA
TGTTCAAGTCATACTTGCAGTTCTCTGATGATGTCACATAGACCTGTCCAGATTGTTCTCGAGTGGCCAACGGTTAAGAC
TCTTGATTGGCACTGAAAATTTTGCAATTGTTAAATTTCAAGAAGCATTTTGCCGTCTGTTATGTAGGTACAGTGTACTA
ACATGTTTACTTTATACCCCCTCCGTCCCAAAATAAGTGTCTCCGCTTTGTACTT-------------AAGTTGAGACAC
TTATTTTAGGACGCAGGGAGTAGTTTATAACTTATGCTATAGGATATTTTCTC-CTAAGAAAGCTGCTCTATACATTTAA
TCCTGGCGTCCAGTTCCTACTAGCATGCTGCCTCGTGATTTGTGCTAAACTCTGGCTACCTGTGTTTCCAATTTTTGGCA
GTCAAAAAATGCGGGGAAAACTAGCAAAGAGCCTCTGGATGTGGCTCCAAAGGAACCCATCTTCACCTGCCCGGTGTGTT
GGAACAAGTTGGATGAGCCCGCCACAACAATGTGCGGCCACATCTTCTGCACTAACTGCATAAAGCAAGCCATCCAGTTC
CAGAAGAAATGTCCTACCTGCCGGAAGCACCTGAAGATGAACAATTTCCATCGCATTTACCTTCCTAACACCTCCCGTTA
AGGTGAGTCCTTTCAGTTTCTATACGCCTTAATCTGTTGAGCTTCAGTTTCATCAGATACAGGTCCGTTCGATGTGTTAA
AATGAACCTATCACTTTGAAATCTATCGTCAGGGTCAGGAGTCCTCCCAGGGAGAACCATGGTGGATCTTCTGCTGGGGA
GCATTGTGTACCATCATCACCTGGATGAATGTATGGGAATGGGTCGGTAGGAGTTCATCGTCCTGATGACCGGACTGGAT
AGCCTTCTGCC-------------------------------------------TGAAATGGGGTTAGCCTGATGAACAG
AGTGGATAGCT---TTCTGCCTGAAATGGGTTTAACAAATTTGCCTGTAGCCTTCCATTATATTGTTTGCGGCAACTTAA
AAATGTTGTATGTATTAGGCTAATAGCCTTGTACCCTTTTCTTCTCCATAGTTGGTCGATGTAACTGCGTTTGAGATAAT
GCGAGGGTTTTGCACCTTTGGTATTTCTGTTCAGTGGTGTGCTATGTTCTGAAGTGACTGCCCTGGCATTTTATCAGCTA
CCATACTGCCCAGG-TAGGTATGGCTGAGGACGTAGATGATCTTGTCCCCAGGGGAACTTCATA----------------
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------------------------------------------------GTCATGCCAACAAGCAGACACACTGAAGTAAT
TTTGTTTTGTAAATACAGCAGTTATAAATGTCAAGTATCACAGACTACTACAAGCGCATCCAAGCTATTCCCT----ATC
ATGGGTTTCTTCATTCTGAAAAGATGCATCACAATTGATCCGCTGGTCACTTGCAATAGTAGGTCTAAGAATTTACTATT
AACTAGAACAACATCTACTTTAGGCCTTTGCTGGCAGCTTGTTCATTATCGGGCTGATCTTTTCGTCGGAGAGCCCCCTT
TGGGGGTCAACCTTGTAGGTTTCGTAGAAGTCCAGTATCTCCATTGAAATATTCTTCACCTGGGTATTGCAAATGGATCT
CGATCAATTGGATGGGTATTATGAGGGGGAAGGGGTATC---------CACAAACATGCGCTTACAATGTTCATGTCAAC
ATGAAGTTCTTCAAACCATGAAGTTGTATCCTTATCTTTAAGAACACTGGCAAT
>chr1D_163
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-----------------GTGCCTTTTTATCGCGAGACCTCGTCTTCT-CCTCCTTTCGCATCCTTTTCATTCAAAACAGG
CAGGTGAGAGGGGAGGAGAGTAAATTGCAGAAAACCATCAGTTTAAGGGCTAGGTCATCAGAAAACACTAGGTTACAGTT
TCTTGATAAAAAGTACCACCTCTCTTGTAAACATTTTTGCATCAGCAGATTAGTCTCGTTTGAGTGCGTTTTATGACAGG
TGATCTTCACCTCCCTTGTAAACATTCAATCGTGGTGATCTTCACCTCCCTATTTGACTTACGTAGCATAACTTTTCATG
CCAAATGAGTTTTTATCTATATTTACAAACTAGTCCCAACAATTTTATAGACACCCCTTAATCAAAAATAAAAAACGCAA
TCAGGCCCTTGTGTGCACAAAACCGGTTGCACGACGCCCATGGCTCACGCGAGCAGAAGGAAGGTGGATGGGGCGGACCA
TGGGTCTCGTCGCCGGCAAGAGGGCGCACCATCGGGGTTTAGGGAGCGACGGCGCGCCACTGGCCGGCCAACGGCAGCTT
GTCGAGGACGGCCTGCGGAGGGAGCGGCGGCGGCGGCCTCGGCCTGCAGATCGAGGGAGCGGCGACGGCGGCGGTTGCCT
GCGGAGGGAGCGACGGCGGCTGCCTGCAAAGGGAGCGGCGACGGCGGCGACTGCCTGCGTAGGGAACGACGGCGGCTATT
GCCTGCGGAGGGAGCGGTGGTGGCCTGCGTAGGGAGCAGCAACGGCGGCGGTTGCCTGTGACGGCGGCTTCCCGCGAAAG
GAGTGGCAGCTGCCCGTGAGAGGGGAGGGAAGGGGCATGAGGGGAAGAAAGTTAAGGGCTTTTATGCTTTAAACCCAAAC
AGTGATGCCACGTAAGCAAAAGGGGGGCCCATCTGTCATAAACGCGCTTAAACGAGACTAATCTGTCGATCAGTGGTTTT
TCAAAAATGGTTACGAGAGAGGTGGTGCTTTTTTCAAGAAAATGTAATCTAGTGTTTTCTGATGGTTTTTACTCAGAGGA
GGGAGGA------GGTGGAGGCGCCGAGCGGAAAAAAT--------TGAGCGGGC--CG-----GCGGCGCGGCGCGGCG
GCTGCCTCCTCTGCTCGTCCGATCGAGCT-CGGTTCGTCGGGTGAGCGCCGTACGTCCCCTC--CTCAGCGCGTATCTTC
TCCGCTCGTGGCGATTTCCGCTGGATTTGTGTCGGCGGTAGGCGCCGATCCAGCGAAGTAGTTGCGGGTGACGAGCTGTT
CTTCCATTGGGTCCCCGCGCGGGTTCCTCGACGATCCTGAGGCGGAATTCGTTCATTTCCAGCCAGATTCGCCGTCGATT
CGGTGCGGCTACCTTAGGAATTGAG-AATCAGGGGCGTCTGTGCGCGAGCTGTCCTGCTCGTTTCGTGCTCTAGCTCGCG
GGCGGGTCTCCGGCTTGATCCGTCCTACGGTTGCTGAGGGCCGTGGTGATGAACTGATGATCCTCGGCTGTGGGATTCAG
CAACTCGTTAGGTTTATCCCCCGATTTTGTTACTGCTCGTGGTTTCAGTTCACTGCCCCAGATGGGAC----TTTTTTCA
GTTCAAATTTCGTCACGAACGAGTGGTTGGATTTTGCATTGTCGGTCCTCGGTAGTTTTGTCGAGACGGTCCAAAGTTTG
-------ATCTGAGCATCTATGTCCTGGATTTATG--TATACTGCA--GAGATGGTCACAGGGTAAAAATGCTTGCTTAT
AGCAGACACTTGACAGATAGTTTGTGGTAAAAG-----------------------------------------------
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>chr1B_242
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--GAGGA------GGTGGAGGCGCCGAGCGGAAAAAAT--------TGAGCGGGC--CG-----GCGGCGCGGCGCGGCG
GCTGACTCCTCTGCTCGTCCGATCGAGCT-CGGTTCGTCGGGTGAGCGCCGTACGTCCCCCCTTCTCAGCGCGAATCTTC
TCCGCTCGTGGCGATTTCCGATGGATTTGTGTCGGCGGTAGGCGCCGATCCAGCGAAGTAGTTGCGGGTGACGAGCTGTT
CTCCGATTGGGTCCCCGCGCGGGTTCCTCGACGATCCTGAGGCGGAATTCGTTCATTTCTAGCCAGATTCGCCGTCGATT
CGGTGCGGCTACCTTAGGAATTGGG-AATCAGGGGCATCTGTGCGTGAGCTGTCCTGCTCG-TTCGTGGTCTAGCTCGCG
GGCGGGTCTCCGGCTTGATCCGTCCTACGGTTGCTGAGGGCCGTGGTGATG--------ATCCCCGGCTGTGGGATTCAG
CAACTCGTTAGGTTTATCCCCCGATTTTGTTACTGCTCGTGGTTTCAGTTCACTACCCCGGATGGGAC----TTTTTTTA
GTTCAAATTTCGTCACGAACGAGTGGTTGGATTTTGCATTGTTGGCCCTCGGTAGTTTTGTGGAGACGGTCCAAAGTTTG
-------ATCTGAGCATCGATGTCCTGGATTTATG--TATACTGCA--AAGATGGTCACAGGGTAAAAATGCTTGCTTAT
AGTAGACACTTGACAGATAGTTTGTGGTAAAAG-----------------------------------------------
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>SNPs
---------S---S------------S---------SSSSS--SSSSSSS---S-------S------------------
--------S--S---------S----------------------------------------------------------
----------------------------------------------SS--------------------------------
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---------------------------------------------S----------------------------------
--------------------------------S----------------------------S------------------
--S-----------------------------------------------------------------------------
----------------------S---------------------------------------------------------
------------------------------S---------------SS-------------------------------S
--------------------SS--------------------S---------------------------S---------
-----------------S----------------------------S--------------S------------------
----------------------------------S---------------------------------------------
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---------------------------------------------------------S----------------------
---------------------------------------------------------------------S----------
------------------------------------S--------------------S----S-----------------
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--------------------S---------------------------------------S-------------------
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------------------------------------------------------------------------S-------
---S------------------------------------S---------------------S-----------------
------------------------------------------------------------------------S-------
-------------------------------------------------------S------------------------
-------S----------------------------S-S---------S-------------------------------
-----------------------------------SS-----------S-------------------------------
-------------------------------------------SS---------------------------S-------
-------S-----------S------------------------------------------------------------
--------------------------------------------------------------S-----------------
-------S--------------S---------------------------------------------------------
-----------------------------------------SS-------------------------------------
---------S------------------------S---------------SSSS--------------------------
---S---------------------------------------------------------------S------------
--------------------------------S-----------------------------------------------
-------------------S------------------------------------------------------------
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----------------------------S----------------------------------------S----------
-S------------------------S-----------------------------------------------------
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--------------------S-----------------------------------------------------------
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--------------------------------------------------------------S-----------------
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-----------------------------------S----------------------------SSSS-S--SSSSS---
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----------------------------------------------------------------S--------S------
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---------------------------------------SSSSSSS----------------------------------
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>forward_1742
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------------------------------------------GTTCTGTTCACTGCCCCAGT------------------
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>reverse_3764
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---CGGCGTCCAGTTCCTACTAG---------------------------------------------------------
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>forward_2581
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-ATGCTACCCGGCAAGGTTAA-----------------------------------------------------------
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>reverse_4187
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--------------------------TGTCAGGGTCAGGAGTCCTC----------------------------------
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------------------------------------------------------
