>input_sequence_41609
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-----------------------------------------------------------------------------ATG
GCAGCTGCCTTGCTGAGGAGAGCGGTGGTCGTGGCCGCGGTGCTCGCCACCGTCACCTCGCTGCTCGCCCCCGCCGCGGT
GGCGCAGCTCTCGACGTCCTTCTACAGCGGCAGCTGCTCGAGCCTGGAGTCCATTGTGAGGTCCGGGATGGTGTCCGCCG
TCCAGCAGGAGCCGCGGATGGGCGCCTCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAACGTACGTCGCCAAAAG
TTCCTTCCTTCTACTCTGTTACCTCCATCCATACCCTGCAAATTGTCTCATATCTATGTCAAATCCATGGCCGCACGCAG
GGCTGCGACGGTTCGGTGCTGCTCGACGACTCGTCGACGCTGACCGGGGAGAAGAACGCCGGGCCGAACGCCAACTCGCT
GCGCGGCTTCGAGGTGATCGACGCCATCAAGTCCCGGGTCGACGCAGCCTGCCCGGGGACCGTGTCCTGCGCCGACATCC
TCGCCGTCGCCGCGCGCGACGGCGTTAACCTGGTAATTTAAGCTCGATCGTTACTTACCAT----GCATGCACGATATCC
CCGTGGAGATATATATAGATCTGTTTATTTACGTCCGCCTGCCGACACCCGTACAGCGAACTAGCTGTCTGTCGCCTTAT
TATTTCAGAGAGGAAAAGGCACCGAACTAGGCACTCGATCGCCTTGTCCAAAAGGGT-CACTTATTCCATCGTCTTTTTA
ACAACGCACGCGCGACAAACTAGCACTAGTCAGCACATGTGGGCTAGCCTCGC-----GAAACCGCTTTACGGTGAGGTT
GTTGCCGCTGCATGCATGATGTTGGAAACTTGATCTTCTGA-----GTTAGCATTTTTTTTTTATAGTAACGAACATGGT
ACAGATTTAGACATTTCATCATACCGACGCACGTAGAGATTTACACTGTGAATACATGCACGTCTAACCCTCAAAAAAAA
AATACATGCACGTGTACCCCTGTCGTTGGGAGCACGAGAGACTGAGACCACGCG-TTTTCTTAATAGCGAACATGGTACA
GATGTAGACATTTCACCACAACGTACTTGGCATAACAT-----TATCTCGATCTAGCTAAACAAACATTGCTCGAAAGTC
TGAAATAAATTGAGAAAAAGTAGGCACACCCATGCTAAGTCTATAACTTAAACAGGAGTGA-------------AAGGAA
ACAAACTAAGTTCACCTTCTTTTGAGCTAGTTGATCTATCAATTTTGTCGTGTATGAATAATTGCTCAGTATAT--GAGC
ATGCACGTAGTTACTATCCGTACTTGCTTGATTACCACATGTGGCTATTTGTTCACATGATGATGACGTACGTGCGTGCA
TGTGCAGCTGGGCGGGCCGTCGTGGGGGGTGCCGCTGGGTCGGCGGGACGCGCGCACGACGACTCAGGCAGCGGCGAACA
GCAACCTGCCGTCGCCGTCGTCGAGCGCGGCGACGCTGATCTCGGCGTTCGCGTCCAAGGGGCTGGACTCCCGCGACATG
GTGGCGCTCTCCGGCGCGCACACGATCGGCGCGGCGCGGTGCGCCAGCTTCCGGTCGCGCGTGTACAACGACAGCAACAT
CAACGCCGGGTTCGCGACGCGGCGGCGGCAGGTGTGCCCGGCGCAGGGCGGCGTGGGCGACGGCAACCTGGCGCCGCTGG
ACGCCTTCAGCTCCGTGCGCTTCGACAACGGCTACTTCCGCAACCTGCTGAGCCGCTTCGGCCTCCTCCACTCGGACCAG
GAGCTCTTCAACGGCGGGCCCGTGGACTCCATCGCGCAGCAGTACGCCGGCAACGGCGGGGCCTTCTCGGCCGACTTCGT
CACCGCCATGATCAAGATGGGCAACATCAGCCCGCTCACCGGATCCAACGGCGAGATCCGCAACAACTGCCGGAAGCCCA
ACTAA---------------------------------------------------------------------------
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------------------------------------------------------------------
>chr6D_1_TraesCS6D01G127100
GTACGTGCAAAGTGATAGAGAGAGGCCTCAAGGCTCAAGCCACACT-----GCCACAGGGCCCAGGTAGTCAAATACGGT
AATACTAAAA----TGAAGAGAAGAATGCAATGCAATCACGCATGCATGTGAGCCGACACCTTTACGTGCGGAAAACACG
GCTACGCGCCGGCGCCGCTAGAAACCGATTTGGCGCCAACGCACGCCGTGTCTCGATACAAGCTACGT----GGTGCGCG
CGGTACTGATA-----GGAGGTTTGGCATTTCCTAATCAAGGG-CGTACGGGCTCGGCTGGCCGGGTCCAAGAAAAAGTT
GACAACAGCCGCGCAAAGGCACATGCCAGATGATATGCTTGGTGTTCCCGGCCCCCACGCGCACAGTGACCTCGTTAGCC
CGAACCAACCACCTGCATTACCAAACGCCCCGTACTAACTAACTCTTGTAAGGGCACACCAGAAGGCAAAGATAGTTACA
CCGAAATACACACTTCCACCATCCGGAATGAATCTAGATA----CATCCGTCTGAGCATCAACTAATTTCGGACGGAGGA
AGCA--GTATATAGAAGAGTTGGTTCTTGGAAGGAGGTGTTCAGAAAACTGAGCAGTTTAATCCGTGCAGTGCTGCTGTT
TGTAAGGATCATTTTCTAGGTACGATCATTTTCTGTTGGCGCGTCCGTAAGACCGTGACATAATGTG-----GTACTAGG
GTATAATGCATGCATGATAGGATCGCAGCTCATTAAGAGCTGTCACGAATGGAATGGCCCGACGGGATCCTCGCGAGTCT
CACAACTTGCGCAGCCCGCCCGTGATCAGTATAGTTCATTTT-CCTTCGGGTCCCGTGGCAACAACCGGAGGAATGGACA
CTATATAGTTCACGGGTTAGCGGCAGCTTAGAGGTGGTACCACTCCACTGACCGCTGCCACTGCTACTC-----CAAGTC
GTAAAGGAACTGGAGAGGCTGCGAGGGAGGGCCGGGGGAACT-ATACTATAGTACTGCTATACCAAGCTCGCCATTAATG
GCAGCTGCCTTGCTGAGGAGAGCGGTGGTCGTGGCCGCGGTGCTCGCCACCGTCACCTCGCTGCTCGCCCCCGCCGCGGT
GGCGCAGCTCTCGACGTCCTTCTACAGCGGCAGCTGCTCGAGCCTGGAGTCCATTGTGAGGTCCGGGATGGTGTCCGCCG
TCCAGCAGGAGCCGCGGATGGGCGCCTCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAACGTACGTCGCCAAAAG
TTCCTTCCTTCTACTCTGTTACCTCCATCCATACCCTGCAAATTGTCTCATATCTATGTCAAATCCATGGCCGCACGCAG
GGCTGCGACGGTTCGGTGCTGCTCGACGACTCGTCGACGCTGACCGGGGAGAAGAACGCCGGGCCGAACGCCAACTCGCT
GCGCGGCTTCGAGGTGATCGACGCCATCAAGTCCCGGGTCGACGCAGCCTGCCCGGGGACCGTGTCCTGCGCCGACATCC
TCGCCGTCGCCGCGCGCGACGGCGTTAACCTGGTAATTTAAGCTCGATCGTTACTTACCAT----GCATGCACGATATCC
CCGTGGAGATATATATAGATCTGTTTATTTACGTCCGCCTGCCGACACCCGTACAGCGAACTAGCTGTCTGTCGCCTTAT
TATTTCAGAGAGGAAAAGGCACCGAACTAGGCACTCGATCGCCTTGTCCAAAAGGGT-CACTTATTCCATCGTCTTTTTA
ACAACGCACGCGCGACAAACTAGCACTAGTCAGCACATGTGGGCTAGCCTCGC-----GAAACCGCTTTACGGTGAGGTT
GTTGCCGCTGCATGCATGATGTTGGAAACTTGATCTTCTGA-----GTTAGCATTTTTTTTTTATAGTAACGAACATGGT
ACAGATTTAGACATTTCATCATACCGACGCACGTAGAGATTTACACTGTGAATACATGCACGTCTAACCCTCAAAAAAAA
AATACATGCACGTGTACCCCTGTCGTTGGGAGCACGAGAGACTGAGACCACGCG-TTTTCTTAATAGCGAACATGGTACA
GATGTAGACATTTCACCACAACGTACTTGGCATAACAT-----TATCTCGATCTAGCTAAACAAACATTGCTCGAAAGTC
TGAAATAAATTGAGAAAAAGTAGGCACACCCATGCTAAGTCTATAACTTAAACAGGAGTGA-------------AAGGAA
ACAAACTAAGTTCACCTTCTTTTGAGCTAGTTGATCTATCAATTTTGTCGTGTATGAATAATTGCTCAGTATAT--GAGC
ATGCACGTAGTTACTATCCGTACTTGCTTGATTACCACATGTGGCTATTTGTTCACATGATGATGACGTACGTGCGTGCA
TGTGCAGCTGGGCGGGCCGTCGTGGGGGGTGCCGCTGGGTCGGCGGGACGCGCGCACGACGACTCAGGCAGCGGCGAACA
GCAACCTGCCGTCGCCGTCGTCGAGCGCGGCGACGCTGATCTCGGCGTTCGCGTCCAAGGGGCTGGACTCCCGCGACATG
GTGGCGCTCTCCGGCGCGCACACGATCGGCGCGGCGCGGTGCGCCAGCTTCCGGTCGCGCGTGTACAACGACAGCAACAT
CAACGCCGGGTTCGCGACGCGGCGGCGGCAGGTGTGCCCGGCGCAGGGCGGCGTGGGCGACGGCAACCTGGCGCCGCTGG
ACGCCTTCAGCTCCGTGCGCTTCGACAACGGCTACTTCCGCAACCTGCTGAGCCGCTTCGGCCTCCTCCACTCGGACCAG
GAGCTCTTCAACGGCGGGCCCGTGGACTCCATCGCGCAGCAGTACGCCGGCAACGGCGGGGCCTTCTCGGCCGACTTCGT
CACCGCCATGATCAAGATGGGCAACATCAGCCCGCTCACCGGATCCAACGGCGAGATCCGCAACAACTGCCGGAAGCCCA
ACTAAAGTTGCACGAACGATCGAACTCCTCGAGATTCGTGGGGGTCGCTCGGCATTGCCAGCTAGTAGCATTAGGCCGCC
GGACGGTGTTGCTTTTTTTCTGGTGGGGGAGAGGGTG-------GAGTGTGAAGGAAGGGAAG---GGCAACGACATGAT
TTGGTGGAGTGGCGCTGTCAGGTGAGGAGAGGAACGTACGGGACCGGGGCTCGTGCATGTCTTTTTTTTCGT---AAGTT
TTGATTGCTCACCACGGGGGCCGTGCGTGTCGCCGGCGGCGACACATCACGGCGTCGGCATTGCTTTGGTAAACCGGGTG
CATTCTTTATCTGTACCATATGATGATTATAGTTTCAGATGTAAGTCTT-GTAAGTACGTACGTGGCTCCAACGATGATT
GTTTTGCAAGGAAAGAAATTA---ATAAGAAAGGACACTTTGCTCATGTCATGTGGTGTGTTTCATCAAGGCTGTACCAA
ACCCGGGCATTACGGGTAGGAGTACAGTTCTCTGGATGGGGATCTTCAACTGACCATACGTCCTACCAAACCCGGGCATT
GACCGGGTTAGGCCGGGCCTTGCAAAGCCCGACCACAAAATGCCAATCACTATGAAAAAATCTATTCTAAAACCCAGTTG
ATCAAACTATCAA-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------TCTAATTCCATCGCTTGGTTCCTATAGTCATATGTGTCATTTCTCATGTTTCCCTCAAGATCG
TCAAAAAATAGGTTACCATGGACACCATTCGGTTCATGCCAACAACGGTGGTTTGGGGGGGCACACTCTGCTGAACGAGT
ATGAGTCATACTATAAGAGCATCTCCAATAGCCGCGCCAAACAAGCGTCACGCCGCAAAATTGCCTTTTTTAGCGCGCAC
GCAATCGGTATAGTGGCTCTAGCGGGCGCGCAAAAACCGCGCGCGCGGCATATGTAGTTCAGCGCGCGCCGCTTATTTGC
TGCGCCCGCTCCCACGCGCTGGACTCTCGCGCGCTCGCTCGCAATCCCCCCCCCCTCCCAGCCGTG
>chr6A_1
GTACGTGCAAAGTGATCGAGAGAGAGCAG-GGCCTCAAGCCACACT-----GCCACAGGGCCCAGGTAGTCAAATACGGT
AATACTAAAATTAATGAAGAGAAGAATGCAATACAATCACGCATGCATGTGAGCCGACACCTTTACGTGCGGAAAACACG
GCTACGCGCCGGCGCCGCTAGAAACCGATTTGGCGCCAACGCACGCCGTGTCTCGATACAAGCTACGTACGTGGTGCGGA
TGGGTGCTGATAGGAGGGAGATTTGGCATTTCCTAATCAAGGGGCGTACGGGCTCGGCTGGCCGGGTCCAAGAAAAAGTT
GACAACAGCCACGTAAAGGCACATGCCAGATGATATGCTTGGTGTTGCCGGACCCCACGCGCACAGTGACCTCGTTAGCC
CCAACCAACCACCTGCATTACCAAACGCCCCGTACTAACTAACTCTTGTAAGGGCACACCAGAAGGCAAAGATAGTTACA
CCAAAATACACACTTCCACCGTCCGGAACGAATCTAGATATATACATCCGTGTGAGCGTCAACTAATTTCGGGCAAAGGG
AGCA--GTATACGGAAGAGTTAGTTCTTGGAAGGAGGTGTTCAGAAAACTGAGCAGTTTAATCCGTGCAGTGCTGTTGCT
TGTAAGGATCATTTTCTAGGTACGATCATTTTCCGTTGGCGCGCCCGTAAGACCGTGTGATATAATGTAGGAGTACTAGG
GTATAATGGATGCATGATAGGATCGCAGCTCATTAAGAGCTGTCACGAATGGAATGGCC-GACGGGATCCTCGCCAGTCT
CACAACTTGCGCAGCCCGCCCGTGATCAGTATGGTTCATTTTTCCTTCGGATCCCCTGGCAACAACCGCAGGAATGGACA
CTATATAGTTCACGGGTTAGCGGCAGCTTAGAGGTGGTACCACTCCACTGACCGCTGCCACTGCTACTCGTCTCCAAGTC
GTAAAGGAACTGGAGAGGCTGCGAGGGAGGGCCGGGGGAACTAATACTATAGCACTGCTATACCAAGCTCGCCATTAATG
GCAGCTGCCATGTCGAGGAGAGCGGTGGCCGTGGCCGCGGTGCTCGCCGCCGTCACCTCGCTGCTCGCCCCCGCCGCCGT
GGCGCAGCTCTCGACGTCCTTCTACAGCGGCAGCTGCGCGAGCCTGGAGTCCATTGTGAGGTCGGGCATGGTGTCCGCCG
TCCAGCAGGAGCCGCGCATGGGCGCCTCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAACGTACGTCGCCGAAAG
TTCCTTCCTGCTACTCTTCTACCTCCATCCATACGCTGCAAATGGTCTCATGTCCATTTCAAATCCATGGCCGCGCGCAG
GGCTGCGACGGCTCGGTGCTGCTGGACGACTCGGCGACGCTGACGGGGGAGAAGAACGCCGGGCCGAACGCCAACTCGCT
GCGCGGCTTCGAGGTGATCGACGCCATCAAGTCCCGGGTCGACGCGGCGTGCCCCGGCACCGTGTCCTGCGCCGACATCC
TCGCCGTCGCCGCGCGCGACGGCGTTAACCTGGTAATTTAAGCTCGCTCGCTACTTACCATGCACGCATGCACGACATCC
CCGTGGAGATAT--ATAGATCTGTTTATTTACGTCCGCCTGCCGACACCCGTACAGCGAACTAG----CTGTCGCCTTAT
TATTTCAGAGAGGAAAAAGCGCCGAACTAGGCACTCGATCGCCTTGGCCAAAAGGGTTCACTTATTCCATCGTCTTTTTA
ACAACGCACGCGCGACAAACGAGCACTAGTCAGCACATGTGGGCGGGCTAGCCTCGCAGAACCCGCTTTACGGTGAGGTT
GTTGCCGCTGCATGCATGATGTTGGCAACTTGATCTTCTGATGTGGGTTAGCATTTTTTTTATATAGTAACGAACATGGT
ACAGATGTGGACATTTCATCACACTGACGTACGTAGAGA-TTACACTGTGAATACATGCACGT-----------------
-------------GTACCCCTGTCGTTGGGAGCAAGAGAGACTGAGACCACGCGTTTTTTTTAATAACGAACATGGTACA
GATGTAGACATTTCACCACGACGTACTTGGCTAAACACGGCACTGTCTCGATCTAGCTAAACAAACATCGCTCGAAAGTC
TGAAAT-AATTGAAAAAAAATAGGCACACCCATGCTAAGTCTATAACTTAAACAGGAGTGA-------------AAGGAA
ACAAACTAAGTTCACCGTCTTTTGAGCTACTTGATCTATCAATTTTGTCGTGTATGAATAATTGCTCAGTATAT--GAGC
AT----GTAGTTACTATCCGTACTTGCTTGATTACCGCATGTGCCTATTTGCTCACATGATGATGACGTACGTGCGTGCA
TGTGCAGCTGGGCGGGCCGTCGTGGGGGGTGCCGCTGGGCCGGCGGGACGCGCGCACGACGACTCAGGCAGCGGCGAACA
GCAACCTGCCGTCGCCGTCGTCGAGCGCGGCCACGCTGATCTCGGCGTTCGCGTCCAAGGGGCTGGACTCCCGCGACATG
GTGGCGCTGTCCGGCGCGCACACGATCGGCGCGGCGCGGTGCGCGAGCTTCCGGTCGCGCGTGTACAACGACAGCAACAT
CAACGCCGGGTTCGCGACGCGGCGGCGGCAGGTGTGCCCGGCGCAGGGCGGCGTGGGCGACGGCAACCTGGCCCCGCTGG
ACGCCTTCAGCTCCGTGCGCTTCGACAACGGCTACTTCCGGAACCTGCTGAGCCGCTTCGGCCTCCTTCACTCGGACCAG
GAGCTCTTCAACGGCGGGCCCGTGGACTCCATCGCGCAGCAGTACGCCGGCAACGGCGGCGCCTTCTCGGCCGACTTCGT
CACCGCCATGATCAAGATGGGCAACATCAGCCCGCTCACCGGATCCAACGGCGAGATCCGCAACAACTGCCGGAAGCCCA
ACTAAAGGAGTACC-ACGAACGAACTCCCCGAGATTCGTGGGGTTCGCTCGGCATTGCCAGCTAGTAGCATTAGGCCGCC
GGACGGTGTTGCTTTTTTTCTGGTGGGGGAGAGGGTG-------GAGTGTGAAGGAAGGAAGGGAAGGCAACGACATGAT
TTGGTGGAGTGGCGCTGTCAGGTGAGGGGAGGAACGTACGGGACCGGGGCTCGTGCATGTCTTTTTTC--TCGTCAAGTT
TTGATTGCTCACCAGGGGGGCCGTGCGTGTCGCCGGCGGCGACACGTCGCGGCGTCGGCATTGCTTTGGTAAGTCGGGTG
CATTCTTTATCTGTACCATATCATGATTATAGTTTCAGATGTAAGTCTTTGTAAGTACGTACGTGGCTCCAACGATGATT
GTTTTGCAAGGAAAGAAATTAATAATAAGAAAGGACACTTTGCTCATGTCATGTGGTGTGTTTCATCAAGGCTGTACCAA
ACCCGGGCATTGCGGGTAAGAGTACAGTTCTCTCGAT-GGGATCTTCAACTGAACATACGTCCTATGAAACTAGGGCATT
GACCGGGTTGGGCCGGGCCTTGCCAAGCCCGACCACAGA--GCCAAGCACTATGAACAAATCTATTCTAAAACCCAGCTA
ATCAAACTATCA--------------------------------------------------------------------
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------------------------------------------------------------------
>chr6B_1
GTACGTGCAAAGTGATAGAGAGAG----CAGGCCTCAAGCCACATGCCACAGCCACAGGGCCCAGGTAGTCAAATACGGT
AATACTAAAAC----GAAGAGAAGAATGCAATACAATCACCCATGCATGTGAGCCGACACCTTTACGTGCGGAAAACACG
GCTACGCGCCGGCGCCGCTAGAAACCGATTTGGCGCCAACGCACGCCGTGTCTCGATACAAGCTACGT----GGTGCGGA
TGGTACTGATA-----GGAGATTTGGCATTTCCTAATCAAGGGGCGTACGGGCTCGGCTGGCCGGGTCCAAGAAAAAGTT
GACAACAGCCGCGCAAAGGCACATGCCAGATGATATGCTTGGTGTTGCCGGACCCCACGCGCACAGTGACCTCGTTAGCC
CGAACCAACCACCTGCATTACCAAACGCCCCGTACTAACCAACTCTGGTAAGGGCACACC--AAGGCAAAGATAGTTACA
CCAAAATACATACTTCCACCGTCCGAAATAGATCTAG----ATACATCCATCTGAGCGTCAACTAATTTCGGGTGGAGGG
AGCTGTGTATACAGAAGAGTTGGTTCT----------------------------------------------TGTTACT
TGTAAGGATTATTTTCTAGGTACGTTCGCTTTCTGTTGGCGCGCCCGTAAGACCGTGATATAATGTG-----GTACTAGG
-----------------------------------------GTCACGAATGGAATGGCC-GACGGGATCCTCGCCAGTCT
CACAACTTGCGCAGCCCGCCCGTGATCAGTATAGTTCATTTTTCCTTCGGGTCCCCAGGCAACAACCGCAGCAATGGACA
CTATATAGTTCACGGGTTAGCAGCAGCTTAGAGGTGGTACCACTCCACTGACCACTGCCACGCCACTGCTACTCCAAGTC
GTAAAGGAACTC------------GGGAAGGCCGGGG-AACT-ATACTATAGTACTGCTATACTAAGCTCGCGATTAATG
GCAGCTGCCTTGCTGAGGAGAGCGGTGGCCGTGGCCGCGGTGCTCGCCGCCGTCACCTCGCTGCTCGCCCCCGCCGCGGT
GGCGCAGCTCTCGACGTCGTTCTACAGCGGCAGCTGCTCGAGCCTGGAGTCCATTGTGAGGTCGGGGATGGTGTCCGCCG
TCCAGCAGGAGCCGCGGATGGGCGCCTCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAACGTACGTCGCCAAAAA
TC----CCTGCTACTCTATTAA---CCTCCGTATGTTGCAAATGGTCTCAC------GTCAAATCCATGGCCGCGCGCAG
GGCTGCGACGGCTCGGTGCTGCTGGACGACTCGTCGACGCTGACGGGGGAGAAGAACGCCGGGCCGAACGCCAACTCGCT
GCGCGGCTTCGAGGTGATCGACGCCATCAAGTCCCGGGTCGATGCGGCCTGTCCCGGCACCGTGTCCTGCGCCGACATCC
TCGCCGTCGCCGCGCGCGACGGCGTTAACCTGGTAATTTAAGCTCGAACGTTACTTACCAT----GCATGCACGATATCC
CCGTGGAGATAT--ATAGATCTGTTTATTTACGTCCGCCTGCCGACACCCGTACAGCGAACTAG----CTGTCGCCTTAT
AATTTCAGAG--GAAAAGGCACCGAACTAGGCACTCGATCGCCTTGTCCAAAAGGGT-CACTTATTCCATCGTCTTTTTA
ACAACGCACGCGCGACAAACTAGCACTAGTCAGCACATGTGGGCTACCCTCGCAG-----ACCCGCTTTACGGTGAGGTT
GTTGCCGTTGCATGCATGATGTTGGCAACTTGATCTTCTGA-----GTTAGCATTTTTTTTTTTTTGTAACGAACATGGT
ACAGATGTGGACATTTCAT---ACTGACGCACGTAGAGATTTACACTGTGAATACATGCACGT-----------------
---------ACGTGTACCCCTGTCGTTGGGAGCACGAGAGACTGAGACCACGCG-TTTTTTTAATAACGAACATGGTACA
GATGTAGACATTTCACCACGACGTACTTGACATAACAT-----TGTCTCGATCTAGCTAAACAATA---GCTCGAAAGTC
TGAAATAAATTGAGAAAAATACA-CACACCCATGCTAAGTCTATAACTTAAACATGAGTGACTGGTTCCACCACAAGGAA
ACAAACTAAGTTCACCGCCTTTTGAGCTAGTTGATCTATCAAATTTGTCGTGTATGAATAATTGCTCAGTATATGAGAGC
AT----GTAGTTACTACCCGTACTTGCTTGATTACCACATGTGCCTATTTGTTAACATGATGATGACGTACGTGC----A
TGTGCAGCTGGGCGGGCCGTCGTGGGGGGTGCCGCTGGGCCGTCGGGACGCGCGCACGACGACTCAGGCAGCGGCGAACA
GCAACCTGCCGTCGCCGTCGTCGAGCGCGGCCACGCTGATCTCGGCGTTCGCGTCCAAGGGGCTGGACTCCCGCGACATG
GTGGCGCTGTCGGGCGCGCACACGATCGGCGCGGCGCGGTGCGCGAGCTTCCGGTCGCGCGTGTACAACGACAGCAACAT
CAACGCCGGGTTCGCGACGCGGCGGCGGCAGGTGTGCCCGGCGCAGGGCGGCGTGGGGGACGGCAACCTGGCCCCGCTGG
ACGCGTTCAGCTCCGTGCGCTTCGACAACGGCTACTTCCGGAACCTGCTGAGCCGCTTCGGCCTCCTCCACTCGGACCAG
GAGCTCTTCAACGGCGGGCCCGTGGACTCCATCGCGCAGCAGTACGCCGGCAACGGCGGAGCCTTCTCGGCCGACTTCGT
CACCGCCATGATCAAGATGGGCAACATCAGCCCGCTCACCGGATCCAACGGCGAGATCCGCAACAACTGCCGGAAGCCCA
ACTAAAGTTGCACGAACGAACGAACTCCTCGAGATTCGTGGGGATCGCTCGGCACTGCCAGCTAGTACCATTAG---GCC
GGACGGTGTTGCTTTTTTTCTGGTGGGGGAGAAGGTTGAGTCTTGAGTGTGAAGGAAGGAAGGGAAGGCAACGACATGAT
TTGGTGGAGTGGCGCTGTCAGGTGAGGAGAGGAACGGGACC-----GGGCTCGTGCATGTCTTTTTTTCTTCGTCAAGTT
TTGATTGCTCACCACGGGGGCCGTGCGTGTCGCCGGCGGCGACACATCACGGCGTCGGCATTGCTTTGGTAAACCGGGTG
CATTCTTTATCTGTACCATATGATGATTATAGTTTCAGATGTAAGTCTT-GTAAGTACGTGCGTGGCTCCAACGATGATT
GTTTTGCAAGGAAAGAAATTA---ATAAGAAAGGACACTTTGCTCATGTCATGTGGTGTGTTTCATCAAGGCTGTACCAA
ACCCGGGCATGACGGGTAGGAGTACAGTTCTCTCGAT-GGGATCTTCAACTGACCATACGTCCTACCAAACCCGGGTATT
GACCGGGTTGGGCCGGGCCTTGCAAAGCCAGACCACAAAATGCCAAGCACTATGAACAAATCTATTCTAAAACCCAGTTG
ATCAAACTATCACTCGATCAGCTAGGGCGGGTTGATGATGGGCAAACCAAGGTTGCTAAATGGACCAAAACAGAGCTAAA
TGTGTATAAAATGGTTGATGCAATGCTATATGGATGATGGAAGGGGAGCTACAACAGTTGTACTTCGTAATCATCGAGGG
GAGGCGATGTCACGTGGCTCTTTCTTATTTGATCATGTGTTCGATGCTCCTTCCGCGGAGGGGTTAGCTCCGAGAAACGG
AATGATACTTGCGGATGAACTAGGATGCTGACGGGTTGTTTTTGAATCTGATTGCTAGAACTTATGAATGCTTGTAATGG
GGTGGCTGAAATACTCAGCACATATACAGTTATCCTTATTGATTGCTTCCATATGGCGCAGAGGATTGGATCAGTCTCTT
TTGTTCACCGTGAGAGGCAAACATAGTGGCACACTCTTTAGCAAGAAAGTCTTTGATTCCCAAGTTGTTATTTCTTGGGG
TGGTGAACCTCTTGGTTTTCTCTTAGCCAAGTTGGTTAAAGATGTAACTATTATTTAAGTTTTAATAAAGTGCGCCAGAA
GTTAAAAAAACTATCAGTCTAATTCCATCATTTGGTTAATATAGTCATATGTGTCATTTCTCATGTTTCCCTCAAGATAT
TCAGAAAATAG---------------------------------------------------------------------
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>chr7A_2330
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--TGCAGCTAGGCGGGCCGAGCTGGGCGGTGCCGCTGGGCCGGCGGGACTCGACGACGGCGAGCCTGGCGGAGGCGAACG
CCGACCTCCCAGGGCCGACGCTGAACCTCGACCAGCTCATCCGCGCGTTCGACAAGAAGCAGCTGACCCCGCGCGACCTC
ACGGCGCTCTCCGGCGCGCACACCATCGGCTTCTCGCAGTGCCAGTTCTTCCGCGACCACATCTACAACGGCACCAACAT
CGACCCGGCCTTCGCGGCGCTGCGCCGGCAGACATGCCCCGCCGCGGCCCCTGCCGGCGACGCCAACCTGGCGCCGTTCG
ATGCGCAGACCCAGCTCGTCTTCGACAACGCCTACTACCGCAACCTGGTCGCCCAGCGCGGCCTGCTACACTCGGACCAG
GAGCTCTTCAACGGCGGCTCCCAGGACGCGCTGGTGCGCCAGTACGGCTCCAACCCGGCGCTCTTCGCCGCCGACTTCGT
GACCGCCATGATCAAGATGGGCAACATCGCCCCCCTCACAGGGGCCAGCGGCCAGATCAGGCGCAACTGCAGG-------
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------------------------------------------------------------------
>SNPs
------------------------SS-S--S-S-----------------------------------------------
--------------------------------S-----------------------------------------------
------------------------------------------------------------------------------SS
S-------------------S-----------------------------------------------------------
----------------------------------------------S----S----------------------------
--------------------------------------------------------------------------------
--S-----------------S------------------------------------S--------------S------S
-----------S---------------------------------------------------------------S--S-
-------------------------------------------S--------------S---------------------
--------S--------------------------------------------------S--------------S-----
-------------------------------------------------------S------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------------------S-------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
---------S-------S----------------S--------S-------S--S-------------------S-----
-----------S-----------S--------------------S-----------------------------------
---------------------------------------------S--------S--S----------------------
--------------------------------------------------------------------------------
------------SS--------------------------------------------------SSSS------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
-------------------------S------------------------------------------------------
------S-S------------S--S--------------------------------------SSSSSSSSSSSSSSSSS
SSSSSSSSS--------------------------------------------------S------S-------------
-------------------S------------------------S-----------------------S-----------
-------------------S------------------------------------------------------------
----------------S---------------------------------------------------------------
--SSSS-------------------------------------S------------------------------------
---------------------------------------S----------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------S-----------------------S------------------------------------
-----------------------------------------------------------S-S------------------
--------------------------------------------------------------------SSSS--------
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---------------------------------S---S------------------------------------------
---------S------------------------------------S---------S-----------------------
------------S-------------------------------------------------------------------
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-----------------------------SS------SS---------------------------------------SS
---S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_780
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----------------------------------------TGTCACGAATGGAATGGCCC--------------------
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>reverse_2003
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--TACATGCACGTGTACCCCTG----------------------------------------------------------
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>forward_1866
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------GCTGCATGCATGATGTTGGA------------------------------------------------------
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------------------------------------------------------------------
>reverse_4336
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---------------AGAGCATCTCCAATAGCCGC---------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
