>input_sequence_41588
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGACAAAACTTCTCATGGCCTTGGATTTGGTGATAGCA
TCAACTCGTTAAACACTTCTCAGTACCAGAGTTCAGTCCAACATACTGCTCAGCATAGAGACACTACACTTGATTCCACA
TCATACTCCAGCTTTTCATTCACTAACACAAAAGCCCTGAAAAGGAAGTGGGGTACTATGGCGGGAGCAGAAGGTACTGG
GGATGCATTACTCACTCTGGGTTTAGGCCGTTCACCAAGTTCATCTGACGATAGCAAAGTAAGCTCTGCCACAGCTTGTG
CAATGTCTCCATGCTCGCTAAAGGAGGCTGATGAGGAGTCATCTGTTGATCTTAGCTTGAATTTTGAGCTTTCCCTTGGC
AATGATGTTGCACACTTCCAACGGAAATCCTCTGCTGGTTTGGTGGCCAAATCTCCTAAACTGGATCTTCAGTTGAGTTT
ATCCACTGGCTCACCTGAATCTGCTGTCACTTGTACAAATATGGTGTCACCAAATATTCATGATGGCTTGGACATACCAG
TGACCTATTCATTACCAGCCATTATAGGGAATGGGTCAGCACCGTCTAGTTGGGGTTTTGAGCACTCTGTGGTTTCATCA
TCATATGCGTCTGAAGCAACATATGCCTTTCCATTTTCGAAGATACCCAGACAAGAGAATGGTACTTTGTCTTCGCCAGT
CATATCGTCAACTATGCCAGCAAGTGTGAAGAGCTCGGTTGCCTGTACTTCGGTGGTAACTAACCCTCAGCAGCGCAATC
TTAACACTAAAACCTGCCAATTCCCTGGATGTGGGAAAGGGGCAAGAGGTGCATCAGGGCATTGCATAGCCCATGGTGGT
GGCAGGCGATGCCAGAAACCTGGTTGCCAGAAGGGTGCTGAAGGAAGGACCATATATTGCAAGGCCCATGGTGGAGGGAG
GAGATGTGAGTTTCTTGGATGTACAAAGAGCGCTGAAGGGCGCACCGACCACTGCATTGCCCATGGCGGTGGCCGCCGGT
GCAGTAATGATGGCTGCTCCCGTGCTGCCCGAGGAAGATCTGGCTTATGCATCAGGCATGGAGGTGGAAAAAGATGTCAG
CAGGAGAAGTGCACCAAGAGCGCAGAAGGTCATTCTGGCCTCTGCATCTCTCATGGGGGTGGGAGGCGTTGCCAGTTTCC
AGAATGTGCAAAGGGTGCACAGGGAAGCACAAAGTTCTGCAAGGCGCATGGTGGAGGCAAGCGCTGCACTTTCTTGGGCT
GTACCAAAGGAGCTGAAGGCAGCACCCCTTACTGCAAGGGCCACGGAGGAGGCAAGCGCTGCTTATTTGAGGGTGGTGGA
GTGTGCCCGAAGAGTGTGCATGGCGGGACGCAGTACTGTGTTGCGCACGGTGGTGGGAAGAGGTGCGCTATTTCTGATTG
CACTAAGAGTGCTAGAGGGCGGACGGAGTACTGTGTGCGCCATGGTGGTGGCAAGAGATGCAGGTTCGACGGCTGTGTGA
AGAGTGCACAGGGGAGCACTGATTTCTGCAAGGCGCACGGGGGAGGCAAGCGCTGCTCATGGGGCCTGCCGGACTCGAGC
TTCGGTATTGGCACAGAGCAGTGTGATAAATTTGCTCGCAGCAAGACTGGCCTCTGTTCAGCTCACACCGCTCTAGTCCA
GGACCACTGTGTTCATGGTGGTGGTACATTAGGCCCTGTGATCCACCACTTCGCCACAGATGTTAAACCCGACGAGATGG
AAGTTGCTGCAGCAGTGAAGGTTGATCCTGTTTCGATGCAGTCGGAGCCTCCATTGCCGGAGGGCAGGGTGCATGGCGGC
GGGCTGCTGGCGCTGCTTTCTCGCGGCGGAAACCACACAGGCCCTGTTGGTAACTTGGAGAACGGCGCCTCTGTCATGAT
GGCGTGGATGTGA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr3D_1_TraesCS3D01G229000
AGATAATGTGGTGCTGGTATTCAAATAAACAACAGATGGCAAATGTTTAATACAGTTGGAACTGCAATATTGAATTACAC
CTGGCCATCTATAGGTTCTGAGATTTGTTGTCCCCTCAGCTGATATAGTACATGTGTAATCAATCTTTCTGATCTTTGAT
CTGTGTAGGCACTTACAGATCAACAAATAAAAACGGTACATATAGACTCATCTCAAAACAATGCTATGCAATGTTATAAT
CTTATACTTCCTCCGTCCCGAATTACTTGTCTTACATTTGTCTAGATACGAATGTATCTAGACAGGTTTTAGTGTTAGAT
ACATCCGTATCTAGACAAATCTAAGACAGGTAATTTGGGACGGAGGTACTAATATCTTGAGAGAATATGATTATAAAAGC
TAACTATTGAAGTCACTACAAAATTATAAACAGAGTCTGTTAAATTTACAAGTTGAAAGATTTAGCATTAGTGTAAACCA
ACATTATTTTGTTTTGAATTATAAAGGCACCGACAATTCTAAGATCTCTTGATCATGACAGAAGTGGACATGTCATGACT
GTGCTCTCCTTTTAGTAGATAGCTGCTCCTGGTTGTGGTCTTCTTTTCCCTTTGTATGCAATTTTTATGACCCTTTAATG
TTAAGTAGCCTTTTATGGATCTCTTTTTACTTTTGCTGCATGAGCTTTGTAGTTGAGACTTCCTATGTTCTCATCTCATA
TATTTTTTGCTAATCAGCAGGATCATCACCTTCTGTTTGGCCTGAACTGTGGAAGTTTCTAAGTAGAAACTGAGGGTCAG
TTCAAAACTTCATCCCACTCACCCCATACATACTGGCGAGAAATGGACCGTGATGATGTATCTGGCTTTGTTAGCGGGGG
TTGCAAGCTGTTCTGAGTTTTCTAACCTAGTAGAAGTTCATAAATAAAGTTATGATACCAGGAAGTCAGTCAACTGGTGG
TTCTTTTCATTTACTAATTGGTTGATGTTTCCGAATTGGAATGGACAAAACTTCTCATGGCCTTGGATTTGGTGATAGCA
TCAACTCGTTAAACACTTCTCAGTACCAGAGTTCAGTCCAACATACTGCTCAGCATAGAGACACTACACTTGATTCCACA
TCATACTCCAGCTTTTCATTCACTAACACAAAAGCCCTGAAAAGGAAGTGGGGTACTATGGCGGGAGCAGAAGGTACTGG
GGATGCATTACTCACTCTGGGTTTAGGCCGTTCACCAAGTTCATCTGACGATAGCAAAGTAAGCTCTGCCACAGCTTGTG
CAATGTCTCCATGCTCGCTAAAGGAGGCTGATGAGGAGTCATCTGTTGATCTTAGCTTGAATTTTGAGCTTTCCCTTGGC
AATGATGTTGCACACTTCCAACGGAAATCCTCTGCTGGTTTGGTGGCCAAATCTCCTAAACTGGATCTTCAGTTGAGTTT
ATCCACTGGCTCACCTGAATCTGCTGTCACTTGTACAAATATGGTGTCACCAAATATTCATGATGGCTTGGACATACCAG
TGACCTATTCATTACCAGCCATTATAGGGAATGGGTCAGCACCGTCTAGTTGGGGTTTTGAGCACTCTGTGGTTTCATCA
TCATATGCGTCTGAAGCAACATATGCCTTTCCATTTTCGAAGATACCCAGACAAGAGAATGGTACTTTGTCTTCGCCAGT
CATATCGTCAACTATGCCAGCAAGTGTGAAGAGCTCGGTTGCCTGTACTTCGGTGGTAACTAACCCTCAGCAGCGCAATC
TTAACACTAAAACCTGCCAATTCCCTGGATGTGGGAAAGGGGCAAGAGGTGCATCAGGGCATTGCATAGCCCATGGTGGT
GGCAGGCGATGCCAGAAACCTGGTTGCCAGAAGGGTGCTGAAGGAAGGACCATATATTGCAAGGCCCATGGTGGAGGGAG
GAGATGTGAGTTTCTTGGATGTACAAAGAGCGCTGAAGGGCGCACCGACCACTGCATTGCCCATGGCGGTGGCCGCCGGT
GCAGTAATGATGGCTGCTCCCGTGCTGCCCGAGGAAGATCTGGCTTATGCATCAGGCATGGAGGTGGAAAAAGATGTCAG
CAGGAGAAGTGCACCAAGAGCGCAGAAGGTCATTCTGGCCTCTGCATCTCTCATGGGGGTGGGAGGCGTTGCCAGTTTCC
AGAATGTGCAAAGGGTGCACAGGGAAGCACAAAGTTCTGCAAGGCGCATGGTGGAGGCAAGCGCTGCACTTTCTTGGGCT
GTACCAAAGGAGCTGAAGGCAGCACCCCTTACTGCAAGGGCCACGGAGGAGGCAAGCGCTGCTTATTTGAGGGTGGTGGA
GTGTGCCCGAAGAGTGTGCATGGCGGGACGCAGTACTGTGTTGCGCACGGTGGTGGGAAGAGGTGCGCTATTTCTGATTG
CACTAAGAGTGCTAGAGGGCGGACGGAGTACTGTGTGCGCCATGGTGGTGGCAAGAGATGCAGGTTCGACGGCTGTGTGA
AGAGTGCACAGGGGAGCACTGATTTCTGCAAGGCGCACGGGGGAGGCAAGCGCTGCTCATGGGGCCTGCCGGACTCGAGC
TTCGGTATTGGCACAGAGCAGTGTGATAAATTTGCTCGCAGCAAGACTGGCCTCTGTTCAGCTCACACCGCTCTAGTCCA
GGACCACTGTGTTCATGGTGGTGGTACATTAGGCCCTGTGATCCACCACTTCGCCACAGATGTTAAACCCGACGAGATGG
AAGTTGCTGCAGCAGTGAAGGTTGATCCTGTTTCGATGCAGTCGGAGCCTCCATTGCCGGAGGGCAGGGTGCATGGCGGC
GGGCTGCTGGCGCTGCTTTCTCGCGGCGGAAACCACACAGGCCCTGTTGGTAACTTGGAGAACGGCGCCTCTGTCATGAT
GGCGTGGATGTGAGTGGGCGGACATTCTCATCAAGAATTGGTTGCTTCAAGTTTTGATCTGTTTCCAGAGCTAATGCTGT
GGCGGGATGAAGTTCCACATTTCACCAATTGTTGTCCTAGTTGTTTGGAAGTGGTA--GGACATATATCCTCCGTGTAGA
ATAAATAAGGGAGAGCGTTGTGGGCTTCTCTGTTATTGTAATTAATTA---ATTAATGTCGTCAAACTGCCCTTGCTTTG
TGTTTATTACAGTTTGTGTAA--TCTGATACTATTTCACACTTCCTACTTGGATGTCATCTCTTCGCTGTTTGCTTTGCT
TTGTGTTTCTGGTAATAGTGCAGCATGTAGTACGATATTTTTGG--------TGGGTAGAAGTCTGTCTTATATTGATCG
GATGAGGGTTATTTTGTTATCGATTATTCATCAGATAATTCTTCTTTTTGC--CGAGTCATCAGATAATTCTCAGTCGCG
TCAAGAGATGAATGTTGATGCATA-TATCATTTCTAGAAACTCTCTAGATTTAGTACCATGAATGTCAAGAGAAGAATGT
TGATGCGCATATCATTGCTAGAATCTCTCTAGAT-TTTTTTGGAACTTGTGGCACAC---TCAAATCAAGTACTTGTTAC
ATCACTGACAAGTTCAGCTAGGATAATCTACGAAGGATCACCCTCATCCTCCCAAGAAACTACATAAC------------
--------------------------------------------------------------------------------
-------------TATAATCATAGGAAATCCTAGCAAGCTTGTGTGCCACCTTGTTCCCCTAAGTGAGAGGAAAATACCC
AATACTTTGAGCTAAATGAAAACACTTCGTTCAGAGTAGTAGAATAA-AATGAAACTCTAGATTTAGTACCATGAACATC
AAGAGATGAATGTTGATGCCCATGTCATTGCTAGAATTTTCTCAACAACAAAAAAATCGTTGCTAGAAACTCTCTAGATT
TAGTACCAGACCGCCATGTATGGC-TTTTGAGGCCCGGGCTACGTAAAATATGTTATCATTGATCAATAAAGCTTGGGAG
TTACGCTAAAAAAGAAGAGATG
>chr3A_1
AGATAATGTAGTGCTGGTATTCAAATAAACAACAGATGACAAATGTTTAATACAGTTGGAACTGCGATATTGAATTACAC
CT-GCCATCTATAGGGTCTGAGATTTGTTGTCCCCTCAACTGATATAGTACATGTGTAATCAATCTTTCTGATCTTTGAT
CTGTGTAGGCACTTACAGATCAACAAATAAAAACGATAGATATAGACTCATCTCAAAACAATGTTATGCAATGTTATAAT
CTTATACTCCCTCCGTCCTGAATTACTTGTCTTACATTTGTCTAGATACGGATGTATCTAGACACGTTTTAGTGTTAGAT
ACATCCGTATCTAGACAAATCTAAGAGAGGTAATTTGGGACGGAGGTACTAATATCTTGGGAGAATATGATTATGAAAGC
TAACTATTGAAGTCACTACAAAATTATAAACAGAGTCTGTTAAATTTACGAGTTGAAAGATTTAGCATTAGGGTAAACCA
ACATAATTTTGTTTTGAATTATAAAGACACCGACAATTCTAAGATATGTTGATCATGACAGAAGTGGACATGTCATGACT
GTGCTCTCCTTTTAGTAGATAGCTGCTCCTGGTTGTGGTCTCCTTTTCCCTTTGTATGCAATTTTTATGACCCTTTAATG
TTAAGTAGCCTTTTATGGATCTCTTTTTACTTTTGCTGCATGAGCTTTGTAGTTGAGACTTCCTAGATTCTCATCTCATA
T-TTTTTTGCTAATCAGCAGGATCATCACCTTCTGTTTGGCCTGAACTGTGGAAGTTTCTAAGTAGAAACTGAGGGTCAG
TTCAAAACTTCATCCCACTCACCCCATACATACTGGCGAGAAATGGATCGTGATGATGTATCTGGCTTTGTTAGCGGGGG
TTGCAAGCTGTTCTGAGTTTTCTAACCTAGTAGAAGTTCATAAATAAAGTTATGATACCAGGAAGTCAGTCAACTGGTGG
TTCTTTTCATTTACTAATTGGTTGATGTTTCCGAATTGGAATGGACAAAACTTCTCATGGCCTTGGATTTGGTGATAGAA
TCAACTCGGTGAACACTTCTCATTACCAGAGTTCAGTTGAACATACTGCTCAGCATAGAGA---TACACTTGATTCCACA
TCATACTCCAGCTTTTCATTCACTAACACAAAAGCCCTGAAAAGGAAGTGGGGTACTATGGCGGGAGCAGAAGGTACTGG
GGATGCATTACTCACTCTGGGTTTAGGCCGTTCACCAAGTTCATCTGACAATAGCAAAGTAAGCTCTGCCACAGCTTGTG
CAATGTCTCCATGCTCGCTAAAGGAGGCTGATGAGGAGTCATCTGTTGATCTTAGCTTGAATTTTGAGCTTTCCCTTGGC
AATGATGTTGCACACTTCCAAAGGAAATCCTCTGCTGCTTTGGTGGCCAAATCTCCTAAACTGGATCTTCAGTTGAGTTT
ATCCACTGGCTCACCTGAATCTGCTGTCACTTGTACAAATATGGTGTCACCAAATATTCATGATGGCTTGGACATACCAG
TGACCTATTCATTACCAGCCATTATAGGGAATGGGTCAGCACCGTCTAGTTGGGGTTTTGAGCACTCTGTGGTTTCATCA
TCATATGCGTCTGAAGCAACATATGCCTTTCCATTTTCGAAGATACCCAGACAAGAGAATGGTGCTTTAGCTTCGCCAGT
CATATCGTCAACTATGCCAGCAAGTGTGAAGAGCTCGGTTGCCTCTACTTCGGTGGTAACTAACCCTCAGCAGCGCAATC
TTAACACTAAAACCTGCCAGTTCCCTGGATGTGGGAAAGGGGCAAGAGGTGCATCAGGGCATTGCATAGCCCATGGTGGT
GGCAGGCGATGCCAGAAACCTGGTTGCCAGAAGGGTGCTGAAGGAAGGACCATATATTGCAAGGCCCATGGTGGAGGGAG
GAGATGTGAGTTTCTTGGATGTACAAAGAGCGCTGAAGGGCGCACCGACCACTGCATTGCCCATGGCGGTGGCCGCCGGT
GCAGTAATGATGGCTGCTCCCGTGCTGCCCGAGGAAGATCTGGCTTATGCATCAGGCATGGAGGTGGAAAAAGGTGTCAG
CAGGAGAAGTGCACCAAGAGCGCAGAAGGTCATTCTGGCCTCTGCATCTCTCATGGGGGTGGGAGGCGATGCCAGTTTCC
AGAATGTGCAAAGGGTGCACAGGGAAGCACAAAGTTCTGCAAGGCGCATGGTGGAGGCAAGCGCTGCACTTTCTTGGGCT
GTACCAAAGGAGCTGAAGGCAGCACCCCTTACTGCAAGGGCCACGGAGGAGGCAAGCGCTGCTTATTTGAGGGTGGTGGA
GTGTGCCCGAAGAGTGTGCATGGCGGGACGCAGTACTGTGTTGCGCATGGTGGTGGGAAGAGGTGCGCTATTTCCGATTG
CACTAAGAGTGCTAGAGGGCGGACGGAGTACTGTGTGCGCCATGGTGGTGGCAAGAGATGCAGGTTCGACGGCTGTGTGA
AGAGTGCGCAGGGGAGCACTGATTTCTGCAAGGCGCACGGGGGAGGCAAGCGCTGCTCATGGGGCCTGCCGGACTCGAGC
TTCGGTATTGGCACAGAGCAGTGTGATAAATTTGCTCGCAGCAAGACTGGCCTCTGTTCAGCTCACACCGCTCTAGTCCA
GGACCACTGTGTTCATGGTGGTGGTACATTAGGCCCTGTGATCCACCACTTCGCCACAGATGTTAAACCGGACGAGATGG
AAATTGCTGCGGCAGTGAAGGTTGATCCTGTTTCGATGCAGTCGGAGCCTCCATTGCCGGAGGGCAGGGTGCATGGCGGC
GGGCTGCTGGCGCTGCTTTCTCGCGGCGGAAACCACACAGGCCCTGTTGGTAACTCGGAGAACGGGGCCTCTGTCATGAT
GGCGTGGATGTGAGTGGGCGGACATTCTCATCAAGAATTGGTTGCTTCAAGTTTTGATCTGTTTCCAGAGCTAATGCTGT
GGCGGGATGAAGTTCAACATTTCACCAATTGTTGTCCTAGTTGTTTGGAAGTGGTA--GGACATATATCCTCCGTGTAGA
ATAAATAAGGGAGAGCGTTGTGGGCTTCTCTGTTATTGTAATTAATTA---ATTAATGTCGTCAAACTGCCCTTGCTTTG
TGTTTATTACAATTTGTGTAA--TCTGATACTATTTCACAGTTCCTACTTGGATGTCGTCTCTTCGCTGTTTGCTTTCCT
TTGTGTTTCTGGTAATAGTGCAGCATGTAGTACGATATTTTTTGGTGGGTACTGGGTAGAAGTCTGTCCTATATTGGTCG
GATGAGGGTTATTTGGTTATCGATTATTCATCAGATAATTCTCTTTTTTTTTGTGAGCCATCAGATAATTCTCAGTCGCG
TCAAGAGATGAATGTTGATGCATATTATCATTGCTAGAAACTCTCTAGATTTAGTACCATGAACGTCGAGAGATGAATGT
TGATGCACATATCATTGCTAGAATCTCTCTAGATTTTTTCTGAAACCTGTGGCACACTATTCAAATCAAATACTTGTTAC
ATCACTAACAAGTTCAACTAGGATAATCTACGAAGGATCAG------CCTCCCAAGAAACTACAGCATTACTCCCTCCGT
TTCGAATTACTCGTCATAGAAATGGATGTATCTAGAACTAAAATACATCTAGATACATCCATACCTGCGACAAGTAATTC
GAAACAGAGGGAGTAGAATCATAGGAATTCCTAGCAAACTTGTGTGCCACCTTGTTCCCCTAAGTGAGAGGAAAAGGACA
AATACTTTGAGCTAAATGAAAACACTT-GTTCAGAGTAGTAGAATAAGAATGAAACTCTAGATTTAGTACCATGAACGTC
AAGAGATGAATGTTGATGCCCATATATCAAA-----------------------------TGCTAGAAACTCTCTAGATT
TGGTACCAGACCGCCATGTATGGCTTTTGGAGGCCCGGGCTATGTAAAATATGTTATCATTGATCAATAAAGCTCGGGAG
TTTCGCTAAAAAAGAAGAGATG
>chr3B_1
AGATAATGGGGTGCTGGTATTCAAATAAACAACAGATGACAAATGTTTAATGCAGTTGGAACTGCAATATTGAATTACAC
CTGGCCATCTATAGGGTCTAAGATTTGTTGTCCCCTCAACTGATATAGTACATGTGTAATCAATCTTTCTGATCTTTGAT
CTGTGTAGGCACTTACAGATCAACAAATAAAAATGATACATATAGACTCATCTCAAAACAATGCTATGCAATGTTATAAT
CTTATACTCCCTCCGTCTCGAATTACTTGTCTTACATTTGTCTAGATACGGATGTATCTAGACACGTTTTAGTGTTTGAT
ACATCCGTATC-----AAATCTAAGACAAGTAATTTGGGACGGAGGTACTAATATCTTGAGAGAATATGATTATAAAAGC
TAATTATTGAAGTCACTACAAAATTCTAAACAGAGTCTGTTAAATTTACAAGTTGAACGGTTTAGCATTAGGGTAAACCA
ACATTAGTTTGTTTTGAATTATAAAGGCACCGACAATTCTAGGATCTGTTGATCATGACAGAAGTGGACATGTCATGACT
GTGCTCTCCTTTTAGTAGATAGCTGCTCCTGGTTGTGGTCTCCTTTTCTCTTTGTGTGCAATTTTTATGACCCTTTAATG
TTAAGTAGCCTTTTATGGATCTATTTTTATTTTTGCTGCATGAGCTTTGTAGTTGAGACTTCCTAGATTCTCACCTCATA
T-TTTTTTACTAATCAGCAGGATCATCACTTTCTGTTTGGCCTGAACTGTGGAAGTTTCTAAGTAGAAACTGAGGGTCAG
TTCAAAACTTCATCCCACTCACCCCATACATACTGGCGAGAAATGGATCGTGATGATGTATCTGGCTTTGTTAGCGGGGG
TTGCAAGCTGTTCTGAGTTTTCTAACCTAGTAGAAGTTAATAAATAAAGTTATGATACCAGGAAGTCAGTCAACTGGTGG
TTCTTTTCATTTACTAATTGGTTGATGTTTCCGAATTGGAATGGACAAAACTTCTCATGGCCTTGGATTTGGTGATAGCA
TCAACTCGTTAAACACTTGTCATTACCAGAGCTCAGTCCAACATACTGCTCAGCATAGAGGCACTACACTTGATTCCACA
TCATACTCCAGCTTTTCATTCACTAACACAAAAGCCCTGAAAAGGAAGTGGGGTACTATGGCGGGAGCAGAAGGTACTGG
GGATGCATTACTCACTCTGGGTTTAGGCCGTTCACCAAGTTCATCTGACAATAGCAAAGTAAGCTCTGCCACAGCTTGTG
CAATGTCTCCGTGCTCGCTAAAGGAGGCTGATGAGGAGTCATCTGTTGATCTTAGCTTGAATTTTGAGCTTTCCCTTGGC
AATGATGTTGCACACTTCCAAAGGAAATCCTCTGCTGGTTTGGTGGCCAAATCTCCTAAACTGGATCTTCAGTTGAGTTT
ATCCACTGGCTCACCTGAATCTGCTGTCACTTGTACAAATATGGTGTCACCAAATATTCATGATGGCTTGGACATACCAG
TGACCTATTCATTACCAGCCATTATAGGGAATGGGTCAGCACCGTCTAGTTGGGGTTTTGAGCACTCTGTGATTTCATCA
TCATATGCGTCTGAAGCAACATATGCCTTCCCATTTTCGAAGATACCCAGACAAGAGAATGGTACTTTGTCTTCGCCAGT
CATATCGTCAACTCTGCCAGCAAGTGTGAAGAGCTCGGTTGCCTGTACTTCGGTGGTAACTAACCCTCAGCAGCGCAATC
TTAACACTAAAACCTGCCAGTTCCCTGGATGTGGGAAAGGGGCAAGAGGTGCATCAGGGCATTGCATAGCCCATGGTGGT
GGTAGGCGATGCCAGAAACCTGGTTGCCAGAAGGGTGCTGAAGGAAGGACCATATATTGCAAGGCCCATGGCGGAGGGAG
GAGATGCGAGTTTCTTGGATGTACAAAGAGCGCTGAAGGGCGCACCGACCACTGCATTGCCCATGGTGGTGGCCGCCGGT
GCAGTAATGATGGCTGCTCCCGTGCTGCCCGAGGAAGATCTGGCTTATGCATCAGGCATGGAGGTGGAAAAAGGTGTCAG
CAAGACAAGTGCACCAAGAGCGCAGAAGGTCATTCTGGCCTCTGCATCTCTCATGGGGGTGGGAGGCGTTGCCAATTTCC
AGAATGTGCAAAGGGTGCACAGGGAAGCACAAAGTTCTGCAAGGCGCACGGTGGAGGCAAGCGCTGCACTTTCTTGGGCT
GTACCAAAGGAGCTGAAGGCAGCACCCCTTACTGCAAGGGCCACGGAGGAGGCAAGCGCTGCTTGTTTGAGGGTGGTGGA
GTGTGCCCCAAGAGCGTGCATGGCGGGACGCAGTACTGTGTTGCGCACGGTGGTGGGAAGAGGTGCGCTATTTCTGATTG
CACCAAGAGTGCTAGAGGGCGGACGGAGTACTGTGTGCGCCATGGTGGTGGCAAGAGATGCAGGTTCGACGGCTGTGTGA
AGAGTGCGCAGGGGAGCACTGATTTCTGCAAGGCGCACGGGGGAGGCAAGCGCTGCTCATGGGGCCTGCCGGACTCGAGC
TTCGGTATTGGCACAGAGCAGTGTGATAAATTTGCTCGCAGCAAGACTGGCCTCTGTTCAGCTCACACCGCTCTAGTCCA
GGACCACTGTGTTCATGGTGGTGGTACATTAGGCCCTGTGATCCACCACTTCGCCACAGATGTTAAACCCGACGAGATGG
AAGTTGCTGCAGCAGTGAAGGTTGATCCTGTTTCGATGCAGTCGGAGCCTCCATTGCCGGAGGGCAGGGTGCATGGCGGC
GGGCTGCTGGCGCTGCTTTCTCGCGGCGGAAACCACACAGGCCCTGTTGGTAACTCGGAGAACGGCGCTTCTGTCATGAT
GGCGTGGATGTGAGTGGGCGGACATTCTCATCAAGAATTGGTTGCTTCAAGTTTTGATCTGTTTCCAGAGCTAATGCTGT
GA-----------TCCACATTTCACCAATTGTTGTCCTAGTCGTTTGGAAGTGATAGGGGACATATATCCTCCGTGTAGA
ATAAATAAGGGAGAGCGTTGTGGGATTCTCTGTTATTGTAATTAATTAATTATTAATGTCGTCAAACTGCCCTTGCTTTG
TGTTTATTACAATATATATGTAGTCTGATACTGCTTCACATTTCCTACTTGGATGTCATCTCTCCGCAGTTTGCTTTCCT
TCGTGTTTCTGGTAATAGTGCAGCAGGTAGTATAAT-TTTTTGG--------CGGGTAGAAGTACGTCGTCTATTGATCG
GATGAGGGTTATTTGGTTATCGATTATTCATCAGATAATTCTCTTTTTTTTTGCGAGTCATCGGATAATTCTCTGTCGCC
------------------------------------------------------------------------ATGAACGT
TGATGCACATGTCATTGCTAGAAACTCT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>SNPs
--------------------------------------S-----------------------------------------
---------------S----------------------S-----------------------------------------
-----------------------------------S--------------------------------------------
--------S-----------------------------------------S-------------S---------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-----------------------------------------------S--------------------------------
-----------------------------------------S--------------------------------------
-----------------------------------------------------------------SS-------------
-S------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S----------------------------S------------------------------------S--
--------------------------------------------------------------------S-----------
--------------S---------------------------SS-----SS-----------------------------
--------------------------------S------------------------------S---S-----S------
------S--------------------------------S--S---S----------------------S----------
------S---------S-----------------------SSSSSSS-----------------SS-S------------
--------------------------------------------------------------------------------
---------------S-----------S---------S-------------------------------------SSS-S
---------------------------S-------------------------------------------------S--
-----------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
-S--------------------------S-------------S-------------------------------S-----
--S-------------------
>forward_602
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CTGCTCCTGGTTGTGGTCTT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_2074
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ATGTCAG
CAGGAGAAGTGCA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_1250
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------CGTTCACCAAGTTCATCTGACG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_2488
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ACAGGGGAGCACTGATTTCTG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_2074
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AGGCATGGAGGTGGAAAAAGA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_3480
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TTGGAACTTGTGGCACACTCA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
