>input_sequence_41564
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AAGGTTTCTCAGCTGATTTCGTTGTTTGATTCTTGCCATCTCCTCTGT----TTGCTTCGGCATGCAGCGTGCACTCTGC
GGTGAAGTGAATCG-----CCGGTCGATGCTTGTGATGATCTGAGCCATGAGCCAATTCGTGCCAGATTGGGGAAACATG
GGCGACATCTCCAGGCCACTCGGGTTTGCTCTTGAATCTTGATCGCTTGATGCAATGGAGTTTGTGGTGTCA-----TAT
CTGCGTTACAGGCTAGTACTGGTTACTGACCTTTTTGTGCTTAATTTC-------GTGGCTGCAGGGAAGACGATGACCT
CATGGAGCTGCTGTGGTGCAACGGCAATGTCGTCATGCAGAGCCAGGGTCATCGGAAGCTGCCGCCGAGGCCTGAGAAGG
TTCCGGCGCCGCCGGTGGTGCAAGAAGACGAGGCCGGCCTGTGGTTCCCGTTCGCCCTCGCTGACTCGCTCGACAAGGAC
ATCTTCCAGGACCTCTTCTGCGAAGAACCACCGGGGGCGGCCGGCGTCGACG----------------------------
--------------------------------------------------------------------------------
------------------GCTCCAGCAGGCAGCAATCGATGAGCCTGGCCGACTGCGGCGACAACGCCGGCGGCTTCCAG
TCAGACCTCGTCCAGGCTCGCGCCGGGAAGGCAGCGATGGAGGAGGGCGCGTCGTCGACGCTGAGCGCGATGGGGGCGAG
CTTCTGCGGGAGCAACCAGGTGCAGGTGCAGGGCGCGGTGAGCGACCACGGGCGCGCCGGCCACGCCACTGCCTATGGCG
ACGGCGGAGCGGGCAGCGCTCTGCCCTCGGCGGTGGGGAGCGTAAATGCAAACGCCAGAGGCAGGGGCCACGAGGCCACC
GTGGCCTCCTCGTCGGGGCGGTCCAACTACAGCTTCGGCGTCACCGCCACTACCACCACCACCACCGGCACCGAGCCGAC
GAGCACGAGCAACCGGAGCAGCAAGAGCAAGCGGGGGCTCGACACGGAGGACTCGGAGAGCCCCAGCGAGGACGCCGAGT
CAGAGTCCTTGGTGCTGGAGCGCAAGCCGCCCCAGAAGCTCACGACGGCGCGGAGGAGCCGCGCCGCCGAGGTGCACAAC
CTCTCCGAGAGGGTGCGTTGCGTCATTAATTTCTTCTTGTGCGATCAATGGTCAATTGTTCATTCCGATCAAAAAAAAAA
TGGTCAATTGTTCATTACAACATCTCTGGCGCTGACTCTGG-------------CGGTTGCAGAGGAGACGAGACAGGAT
CAACGAGAAGATGCGAGCCCTGCAAGAGCTCATACCCCACTGCAACAAGGTGACCAA---ATTTCTTTGCTCGATCAGCC
AACGTACGTACC-----AGTTTAGTTTTACTGATTAATCTGCTCGATTTGTGGG-----------TTTTGTGATGGGCGG
CA-----TGCAGACTGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTGAAGACGCTGCAGATGCAGGTGCAGAT
GATGTGGATGGGCAGCGGCATGGCGCCGCCGGCGGTGATGTTCCCGGGCATGCAGATGCACCAGTACCTGCCGCAGATGG
GC---CCGTCCATGGCGCGGATGCCCTTCATGGCGCCGCCGCAGCAGGGCCACGGCGTGAGCCTGCCGGAGCAGTACGCG
CACTTCCTCGGCGTCAACCCCCACCACCACCTGCAGCCGCCGG---------CCCACCACCAC------CAGGTTCCGTC
CGTCCG-CCCGGCAACCGCCAAAACCGTATCCATTTCCAACGCCCCCGCCGTCTTTTCCACCCT-----CCCTAACACGT
AAGATGGACGTTTCTTCCGGCAGCATTTCGCGCAGGGGCTGGGCTACTACCCGCTAGGGGCGAAGGCCCTGCAGCAAAGT
CCGGCGCTCCACCACGTGTCCAATGGCAACGCCGGCGGTGGCACGCCTGCCGCTACCGCCAACGCCACGCCGGGGAACGC
GATACACCCAAACAAAAGATGA----------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr5B_1_TraesCS5B01G380200
CTTCAGCCCACAGCCACAATGTTGCGCGGCTGCTTAAAAGCCACTGCGGGTGCCAAGCACAGGTTCCCCCGCTACCCGCC
CGCTCTTCTCCTTCCTCCCCCTCACTAGCCTCTCCTCCCT------------CCAAGCCAAGAAGAGAGCCGCGGCCCGC
TGACTGAGCATCCTCCCGGAGAAGCTTCCTTAGCCGGTGCTGGATCTTGCAGCCAGACTGGTTAGTTCTTGTTCTTCCAT
GGCTGCTGG---CTCAGTTCCCCCCTCTGCTTTCTCATTACGGTTCTCCAAAATCCGCGTCCCTAATGCGTGTTTTCCAG
TCTCTTCTGAAACCTGATGTGGATTTCACCATATCCACTGGTCTTAACGGCATAATCCTAGTTTTTATACTGCTTGTAAA
GCTTCCAGGTCTTTGTAAATCACTTTTCTGAACCTCTTCGCTTTTCCTATAAAA---------TACTACCTCTTCTCAGC
ATCTTAACAGAAAAATAAAATATATTTTAAAATGATACTCTA---TTGCTAGTGCTCTGTAGACTTGATTGATGAGTGGA
TTAAAAGAACGAATAAACAAATCCCTTTTGTGAAGCCTTTTCACTGTGTTAGCTGGTTGCTAGCTGCTCCTCTGCATGTG
CTGCAGGCAGGTTTACATGACCGGTAGGTTTCCTGCAGGCAGGCTCCCCGTACTGCATCTACCTTTCCTTTTTTTTCCCA
TCATTGGCCTCCCTGTTCCTCACACTGCATAGCCCAGCTGCTTTTTTTATACATATTTTTGGCAATTTTATA----TCTG
AGATTTCCTTT---GCTACCAGAAGTTCTTTTTTTTTTTTAGAACT--ATCGGAGGTTCAAAACATTATTATTTCC--AT
AGTTGGTTCTGTCTGGCATCGCACATGCCCTGCTTGCTTCATATGTAGCCAAATCAGGCTATGCTGCAGGATCCTTGGCA
AGAGGCACATTTTTCTATC--GAGCAGTCTCTTCTCGTTGCCAATCAAATTTAAAATACCATGCCGCATGCACATGAAGC
AAGGTTTCTCAGCTGATTTCGTTGTTTGATTCTTGCCATCTCCTCTGT----TTGCTTCGGCATGCAGCGTGCACTCTGC
GGTGAAGTGAATCG-----CCGGTCGATGCTTGTGATGATCTGAGCCATGAGCCAATTCGTGCCAGATTGGGGAAACATG
GGCGACATCTCCAGGCCACTCGGGTTTGCTCTTGAATCTTGATCGCTTGATGCAATGGAGTTTGTGGTGTCA-----TAT
CTGCGTTACAGGCTAGTACTGGTTACTGACCTTTTTGTGCTTAATTTC-------GTGGCTGCAGGGAAGACGATGACCT
CATGGAGCTGCTGTGGTGCAACGGCAATGTCGTCATGCAGAGCCAGGGTCATCGGAAGCTGCCGCCGAGGCCTGAGAAGG
TTCCGGCGCCGCCGGTGGTGCAAGAAGACGAGGCCGGCCTGTGGTTCCCGTTCGCCCTCGCTGACTCGCTCGACAAGGAC
ATCTTCCAGGACCTCTTCTGCGAAGAACCACCGGGGGCGGCCGGCGTCGACG----------------------------
--------------------------------------------------------------------------------
------------------GCTCCAGCAGGCAGCAATCGATGAGCCTGGCCGACTGCGGCGACAACGCCGGCGGCTTCCAG
TCAGACCTCGTCCAGGCTCGCGCCGGGAAGGCAGCGATGGAGGAGGGCGCGTCGTCGACGCTGAGCGCGATGGGGGCGAG
CTTCTGCGGGAGCAACCAGGTGCAGGTGCAGGGCGCGGTGAGCGACCACGGGCGCGCCGGCCACGCCACTGCCTATGGCG
ACGGCGGAGCGGGCAGCGCTCTGCCCTCGGCGGTGGGGAGCGTAAATGCAAACGCCAGAGGCAGGGGCCACGAGGCCACC
GTGGCCTCCTCGTCGGGGCGGTCCAACTACAGCTTCGGCGTCACCGCCACTACCACCACCACCACCGGCACCGAGCCGAC
GAGCACGAGCAACCGGAGCAGCAAGAGCAAGCGGGGGCTCGACACGGAGGACTCGGAGAGCCCCAGCGAGGACGCCGAGT
CAGAGTCCTTGGTGCTGGAGCGCAAGCCGCCCCAGAAGCTCACGACGGCGCGGAGGAGCCGCGCCGCCGAGGTGCACAAC
CTCTCCGAGAGGGTGCGTTGCGTCATTAATTTCTTCTTGTGCGATCAATGGTCAATTGTTCATTCCGATCAAAAAAAAAA
TGGTCAATTGTTCATTACAACATCTCTGGCGCTGACTCTGG-------------CGGTTGCAGAGGAGACGAGACAGGAT
CAACGAGAAGATGCGAGCCCTGCAAGAGCTCATACCCCACTGCAACAAGGTGACCAA---ATTTCTTTGCTCGATCAGCC
AACGTACGTACC-----AGTTTAGTTTTACTGATTAATCTGCTCGATTTGTGGG-----------TTTTGTGATGGGCGG
CA-----TGCAGACTGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTGAAGACGCTGCAGATGCAGGTGCAGAT
GATGTGGATGGGCAGCGGCATGGCGCCGCCGGCGGTGATGTTCCCGGGCATGCAGATGCACCAGTACCTGCCGCAGATGG
GC---CCGTCCATGGCGCGGATGCCCTTCATGGCGCCGCCGCAGCAGGGCCACGGCGTGAGCCTGCCGGAGCAGTACGCG
CACTTCCTCGGCGTCAACCCCCACCACCACCTGCAGCCGCCGG---------CCCACCACCAC------CAGGTTCCGTC
CGTCCG-CCCGGCAACCGCCAAAACCGTATCCATTTCCAACGCCCCCGCCGTCTTTTCCACCCT-----CCCTAACACGT
AAGATGGACGTTTCTTCCGGCAGCATTTCGCGCAGGGGCTGGGCTACTACCCGCTAGGGGCGAAGGCCCTGCAGCAAAGT
CCGGCGCTCCACCACGTGTCCAATGGCAACGCCGGCGGTGGCACGCCTGCCGCTACCGCCAACGCCACGCCGGGGAACGC
GATACACCCAAACAAAAGATGAGGTATGCTTGT----------TTCTCTTCCCTTCTC----CAGGCAAGGTGCTCGACA
GCTGGAAACTACTTTTTTTCTTTTTTTTTTCTTTTTCG------GGCAAGAGAAGCTTCGGAAGCCCTTGGGAAGCTTGG
ACTAGGAAGCCTGTTTGGTTCACTTCTTTTGTCAAGTTTCGTTGCTTAGTCAGTTGTTAATATATATAGTACGC----AC
ATGGGATCAAAAATCACGTGTTCACTAACATCAAATAATTTCAGCACCCACAAACTTATAAGCTT-------GCAATTAA
TCA---TTTTTTTCCTACTATACGAAATGAAAGGTCG----------------------------CAGCTACACGCGGCC
CCACCGCATCTCCCGTCGACCACCGCCGACCGTCTCTCCTCTCTCACCAATTTTCTTCCTCTCCGCCCGGCGCTCACTGC
TACTGCCATTGCGACCAGATCCGCCGCTAGATCATGGAAGCATTAATCTCATCGTCCTCGTCTTCCAC--------TTCA
CGCCGCTCATCACAACATATCGACGCAATTGGAATTT------CACGCCTTAAGAGTATCTCTGGCCCTGCCCCTAAATT
TTAACTCAAAGAAGTCCTCAAAATTAAATTCCTCAATTGTAGAAAGTATGAAAGTGCTCATCTAACCCTTTT--------
------------------CCTCCGTGGAAGCCTTTCTTCTTCTTTCCTTAATTCCCCCTTCCTTTGT-GAGGGGTTAATT
CCCCTTCTTTCTTTCTCACATCAAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CAC------------------------
--------GGATATGGCAATGTCTATTCTTGGGAGGCATCCACCACGCTGCGGAGCGATCTCGCCTCAAAGAGCACCACC
CGCACCACGCCGGAGTGAGCCGGTGCCGCATTTGGTTCGGGGCTACGGCATGCAGTCTAAGGCATGGTCTTGGGTTTACA
CGGCCAACCACAACTTCTGCCGGTAGAT-AATGTAAAAACTCACCAAGAAAAACAATGGGGTCTCCTATGTGCCCCCGTG
ACTGCACAACATGGAATTCGAATAAGTTGGCAAAACATGGTCTCCATCATCTTAACAGACTTCTTT
>chr5D_1
CTTCAGCCCACAGCCACAATGTTGCGCGGCTGCTTAAAAGCCACTGCGGGTGCCAAGCACAGGTTCCCCCGCTACCCGCC
CGCTCTTCTCCTTCCTCCCCCTCACTAGCCTCCCCTCCCTCTCCTCCAATCTCCAACACAAGAAGAGTACA---------
-GAGTGAGCATCCTCCCGAAGAAGCCTCCTTGGCCGGTGCTGGATCTTGCAACCAGACTGGTTAGTTCTTGC---TCCAT
GGCTGCTGGTTCTTCTGTTTCCCCCTCCGCTTTCTCATTACGTTTCTCCAAAAGCTGCGTCCCTAATGCGTGTTTTCCAA
TCTCTTCTGAAACCTGATGTGGATTTCGCCCTATCCACCGATCTTAACGGGATAATCCTAG-TTTTATGCTGCTTCTAAA
GCTTCTGAGTCTTTGTAAAGCACTTCTCTGAAGCTCTTCGCTTTTCCTATAAAA---------TACT---TCTTCTCAGC
ATCTTAACAGAAAAA---AATATATTTTAAAATGATACTACTCCTTTGCTAGTGCTCTGTAGACTTGATTGATGAGTAGA
TTAAAAAG--GAATAAACAAATCCCTTATGTGAAGCCTTTTCACTGTGTC-GCTGGTTGCTAGCTGCTCCTCTGCATGTG
CTGCAGGCAGGTTTACATGACCGGTAGGTTTCCTGCAGGCAGGCTCCCCGTACTGCATCTACCTTTCCTTTTTTTTCCCA
TCATTGGCCTCCCTGTTCCC--CCCTGCATACTCCACCTGCTTTCCTATA-CATACTTTTGGCAATTTTTTAGTACTCTG
AGATTTCCTTT---GCTATCAGAAGTTCTTTTTTTAAGAATTA-------------TTCAACGCATTATTATTTCCATAT
AGTTGGCCCTGTCTGGCATCGCACATGCCCTGCTTGCTTCATCTGAAGCCAAATCAGGCTATGCTGCAGGA---------
---GGCACATTTTTTTTTCTGGAGCAGTATGTTCTCGTTGCCAATCAAATTTAAAAAACCATGCCGCATGCACATGAAGC
ACAGTTTCTCAGCTGATTTTGTTGTTTGATTCTTGCCATCTCCTCTGT----TTGCTTCGGCATGCAGCGTGCCCTCTGC
GGTGAAGTGAATCG-----CCGGTCGATGCTTGTGATGATTTGAGCCATGAGCCAATTCGTGCCAGATTGGGGAAACATG
GGGGACATCTCCAGGCCACTCGGGTTCGCTCTTGA-------TCGCTTCATGCATTGGAATTTGTGGTCTAA-----TGG
TA--------------------TTGCTAACCTTTTTGTTTTCGTGCATGGTGTGTGTTGCTGCAGCGAGGACGATGACCT
CATGGAGCTGCTGTGGTGCAACGGCAATGTCGTCATGCAGAGCCAGGGTCATCGGAAGCTGCCGCCGAGGCCTGAGAAGG
TTCCGGCGCCGCCGGTGGTGCAAGAAGACGAGGCCGGCCTGTGGTTCCCGTTCGCGCTCGCCGACTCGCTCGACAAGGAC
ATCTTCACGGACCTCTTCTGCGAGGAACCACCGGGGGTCGA------------CGCCGGCAAGGCCGGCAGGGACGGTGC
CCCAGTGTTAGGGGACGCCGACAGGCGCAGCAGCCAGTCGTCCGCGGTGTCGGCGGCGAGCGACCTGATGCCGCCTCCCA
AGTCCACGCACGTGTCCTGCTCCAGCAGGCAGCAATCGATGAGCCTGGCCGACTGCGGCGACAACGCCGGCGGCGTCCTG
TCGGACCTCGTCCAGGCTCGGGCCGGGAAGGCGGCGATGGAGGAGGGCGCGTCGTCGACGCTGAGCGCGATGGGGGCGAG
CTTCTGCGGGAGCAACCAGGTGCAGGTGCAGGGCGCGGTGAGCGAGCAGGGGCGCGCCGGCCACACCACTGCCTATGGCG
GCAGCGGCGCAGGCAGCGCTCTGCCCTCGGCGGTGGGGAGCGGAAATGCAAACGCCAGAGGCAGGGGCTACGAGGCCACG
GTCGCCTCCTCGTCCGGGCGGTCCAACTACAGCTTCGGCGTGACCGCCACCACGG---CCACCACCGGCACCGAGCCGAC
GAGCACGAGCAACCGGAGCAGCAAGCGCAAGCGGGGACTGGACACGGAGGACTCGGAGAGCCCCAGCGAGGACGCCGAGT
CGGAATCATTGGCGCTTGAGCGCAAGCCGCCGCAGAAGCTCACGACGGCGCGGAGGAGCCGCGCCGCCGAGGTGCACAAC
CTCTCCGAGAGGGTGCGTTCCGTGATTCATTTCTTCTTGTGCGATCAATGGTAATTTGGTCATT----------------
-------------------ACATCTCTGAAACTGACGGCTGTTGTTTGTGACGACGGTTGCAGAGGAGACGAGACAGGAT
CAACGAGAAGATGCGAGCGCTGCAAGAGCTCATACCCCACTGCAACAAGGTGCCGGGAGCATTTATTTTCTTGATCGGCG
AACCTGAATGAAACTCTAGTTTGGTTTTACTAATGAATCTGCTCGAT---TGGG-----------TTTTGTGCTGGGCGG
CATGCATTGCAGACTGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTGAAGACGCTGCAGATGCAGGTGCAGAT
GATGTGGATGGGCAGCGGCATGGCGCCGCCGGCGGTGATGTTCCCGGGCATGCAGATGCACCAGTACCTGCCGCAGATGG
GGCCGCCGTCCATGGCGCGGATGCCCTTCATGGCGCCGCCGCAGCAGGGCCACGGCGTGAGCCTGCCGGAGCAGTACGCG
CACTTCCTCGGCGTCAACCC---CCACCACCTGCAGCCGCCGG---------CCCACCACCATCACCATCAGGTTCCGTC
CGTCCGTCCCGGCAACCGCCAAAACCATATCCATTTCCAACGCTCCCGCCGTCTTTTCCACTCT-----CCCTAACACGT
AAGATGGACGTTTCTCCCGGCAGCATTTCGCGCAGGGGGTGGGCTACTACCCGCTAGGGGCGAAGGCCCTGCAGCAGAGT
CCGGCGCTCCACCACGTGTCCAATGGCAACACCGGCGGTGGCACGCCTGCCGCTACCGCCAACGCCACGCCGGGGAACGC
GATACACCCAAACAAAAGATGAGGTATGCTTGT----------TTCTCTTCCCTTCTC----CAGGCAAGGTGCTGGAAG
CT------------------TTTATTTTTTCTTTTTCG------GGCAAGAGAAGCTTCGGAAGCCCTTGGGAAGCTTGG
ACTAGGAAGCCTGTTTGGTTCACTTCTTTTGTCAAGTTTGGTTGCTTAGTCAGTTGTTAATATATTTTTCTATATAGTAC
ATGGGATCAAAAATCACGTCTTCACTAACATCAAATAATTTCAGCACCCACAAACTTATAAGCTTTACATCTGCAATTAA
TCAGTTTTTTTTTCCTACTACACGAAATGAAAGGAAG----------------------------CAGCTACACGCGGTC
CCATCGCATCTCCCGTCGATCACCGCCGACCATCTCTCCTCTCTCACCAATTTTCTTCCTCTCCGCTCGGCGCTCACTGT
TACTGCCATTGCGACCAGATCCGCCGCCAGATCATGGAAGCGCTAATCTCATTGTCCTCTTCTTCCTCGC--------CA
CGCCGCTCATCACGCCATATCGACGCAATTAGAATTT------CATGCCTTAAGAGTATCTCTGCCCCTGCCCCTAAATT
TTAACACAAACAAGTCCTCAAAATTTAACTCCTCAAATGTAAAAAGTATGAAAGTGCTCATCTAGCCCTTTTATAAACTT
AACTCCCAATAGAACTGGCCTACGTGGAAGCATTTCTTCCCCTTCCCTTAATTTCCCCCTTCCTTCGCGAGGGGTTAATT
CCCCTTCTTTCTTTCTCACATCAAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CATGGATATTTTTTTTTTCAAAAAGCA
TCAAGCATGGATATGGCAATGTCTATTCCTGGGAGCCATCCACCATGCTGCGGGGCGATCTCGCCTCAAAGAGCACCAAC
CGCACCATGCCGGAGTGAGCCGGTGCCGCATTTGGTTCGGGGCTACGGCATGCAGTCCAAGGCATGGTCTTGGGTTTACA
CGGCCAACCACAACTTCTGCTGGTAGAT-AATGTAAAAACTC-CCAAGCAAAACAATGGGGTTTCCTATGTGCCCC-GTG
ACTTCACAACATGGAATTTGAATAAGTTGGCAAAACATGGTCTCCATCATCTTAACAGACTTCTTT
>chr5A_153
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TGAGCATCCTCCCGAAGAAGCTTCCATAGCCGGTGCTGGATCTTGCAACCAGACTGGTTAGTTCTTGC---TCCAT
GGCTGCTGG---TTCTCTTCCCCCCTCTGTTTCCTCATTACGTTTCTCCAAAATCTGCGTCCCTAATGCGTGTTTTCCAA
TCTCCTCCGGAACCTGATGTGGATTTCGCCCTATCCGCTGATCCTAACGGGATAATCATAGTTTTACTGCTCCCAAGGCC
TCCTCCTAGTCTTTCTAAATCACTTCTCTGAAGCTCTTCGCTTTTCCTGTAGTAAAATACTCCTACT---TCTTCTCAGC
ATCTTAACAGAAAAA---AATATTTTAAAA---------------TTGCTAGTGCTCTGTAGACTTGATTGATGAGTGGA
TTAAAAGAAC-AATAAACAAAA-CCTCTTCTGAAGCCTTTTCACTGTGTT-GCTGGTTGCTAGCTGCTCCTCTGCATGTG
CTGCAGGTAGGCTTACATGACCGGTAGGTTTCCTGCAGGCAGGCTCCCCGCACTGCATCTACCTTTCC-TTTTTTTCCCA
TCATTGGCCTCCCTGTTCCTTGCACTTCATAGCCCAGCTGCTTTTCTTAT-CCTACATAT-----TTTTATA----TCTG
AGATTTCCTTTGCTGCTATCAGAAGTTCTTTTTTTAAAGAATAATTACATCAGAGGTTCAAAGCATTATTATTTCC--AT
AGTTGGCCCTGTCTGGCATCGCACATGCCCTGCTTGCCTCATCTGAAGCCGAATCAGGCTGTGCTGCACTATCCTTGGCA
GGAGGCACATTTGTTTAC--GGAGCAGTCTCTTCTCGTTGCCAATCAAATTTAAAATACCATGCCGCATGCAGATGAAGC
ACAGTTCCTCAGCTGATTTTGTTGTTTGATTCTTGCCATCTCCTCTGTTTGCTTGCTTCGGCATGCAGCGTGCCCTCTGC
GGTGAAGTGAAGCGAATCGCCAGTCGACACTTGTGATGATCTGAGCCATGAGCCAGTTCGTGCCAGATTGGGGGAACATG
GGGGACATCTCCAGGCCACTCGGGTTCGCTCTTGAATCTTGATCGCTTGATGCATTCGAATTTGTGGGCTGATATGGTAT
CTGCGTTACAGGCTAGT---GGTTGCTGACTTTTTTGTGCTTGATTTG-------GTGCCTGCAGCGAAGACGATGACCT
CATGGAGCTGCTGTGGTGCAACGGCAATGTCGTCATGCAGAGCCAGGGTCATCGGAAGCTGCCGCCGAGGCCTGAGAAGG
TCCCGGCGCCGCCGGTGGTGCAAGAAGACGATGCCGGCCTCTGGTTCCCGTTCGCGCTCGCCGACTCGCTCGACAAGGAC
ATCTTCCAGGACCTTTTCTGCGAGGAACCACCGGGGGCGGCCGGCGTCGACGGCGCCGGCAAGATCGGCAGGGACGGTGT
ACCAGTATTAGGGGAT---GACAGGCGCAGCAGCCAGTCGTCCGCGGTGTCGGCGGCGAGCGACCTGATGCCCCCTCCCA
AGTCCACGCACGTCTCCTGCTCCAGCAGGCAGCAATCGATGAGCCTGGCCGACTGCGGCGACAACGCCGGCGGCGTCCTG
TCGGACCTCGTCCAGGCTCGCGCCGGGAAGGCGGCGATGGAGGAGGGCGCGTCGTCGACGCTGAGCGCGATGGGGGCGAG
CTTCTGCGGGAGCAACCAGGTGCAGGTGCAGGGCGCGGTGAGCGAGCAGGGGCGCGCCGGCCACACCACTGCCTATGGCG
GCGGCGGAGCGGGCAGCGCTCTGCCTTCGGCGGTAGGGAGCGGAAATGCAAACGCCAGAGGCAGGGGCCACGAGGCCACC
GTGGCCTCCTCGTCGGGCCGGTCCAACTACAGCTTCGGCGTGACCACCACCACT------------GGCACCGAGCCGAC
GAGCACGAGCCACCGGAGCAGCAAGCGCAAGCGGGGGCTGGACACGGAGGACTCGGAGAGCCCCAGCGAGGACGCCGAGT
CGGAGTCGTTGGCGCTTGAGCGCAAGCCGCCGCAGAAGCTCACGACGGCGAGGAGGAGCCGCGCCGCCGAGGTGCACAAC
CTCTCCGAGAGGGTGCGTTCCGTCATTCATTTCTTCTTGTGCCATCAATGGTGAATTGTTCATT----------------
----------------ACAACATCTCTGACGCTGACTCTGG-------------CGGTTGCAGAGGAGACGAGACAGGAT
CAACGAGAAGATGCGAGCGCTGCAAGAGCTCATACCCCACTGCAACAAGGTACCGATAGCGCGCGCCATAGCATGTTTCT
TGTC-----------------------------TTGATCGGCTCGATTGGGTTTTTTCATTTCATTTTTGTGATGGGCGG
CA-----TGCAGACTGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTGAAGACGCTGCAGATGCAGGTGCAGAT
GATGTGGATGGGCGGCGGTATGGCGCCGCCGGCGGTGATGTTCCCGGGCATGCAGATGCACCAGTACCTGCCGCAGATGG
GGCCGCCGTCCATGGCGCGGATGCCCTTCATGGCGCCGCCGCAGCAGGGCCACGGCGTGAGCCTGCCGGAGCAGTACGCG
CACTTCCTCGGCGTCAACCC---CCACCACCTGCAGCCGCCCTCCCACCACCCCCACCACCAC------CAGGTTCCGTC
-------------AACCGCCAAAACCATATCCATTTCCAACGCCCCCGCCGTCTTTTTTCCTCTCCCTACCCTAACACGC
AAGATGGATGTTTCTTCCGGCAGCATTTCGCGCAGGGGGTGGGCTACTACCCGCTAGGGGCGAAGGCCCTGCAGCAGAGT
CCGGCGCTCCACCACGTGCCCAATGGCAACACTGGCGCCGGCGCGCCTGCCGCTACCGCCAACACCGCGCCGGGGAACGC
GATACACCCAAACAAAAGATGAGGTATGCTCGCTTCTCATCTCTTCTCTTCTCTTCTCTTCTCAGGGAAGGTGCTAGAAG
TT------------------TTTCCTTTTTATCTTTTTTTTTGCGGCAAGAGAAGCTTCGGAAGCCCTTGGGAGGTTTGG
ACTAG----------------ACTTCTTTTGTGCCCACACGCAC------------------------------------
-------------------------------------ATTTCAGTGCCCACAAACT---AAGCTTTACACCTATGATTAA
TCAG--TTTTTTTCCTACTATACGAAACGAAACATTTGATGTTTGTAGCTTCTGATGAAATGACACATCTACGCACGGTC
CCATCTCATCTCCCGCCGATCACCGCCGACCATCTCTCCTCTCTCACCAATTTTCTTCATGTCCGCTCGGCGCTCACTGT
TACCGCCATTGCGACCAGATC------------ATGGAAGCGTCAATCTCATTGTACTCTTCTTCCTCGTCTCCTATTCA
TGCCGCTCATCACGCCATATCGACACGATTAGAATTTGAATTTCACGCCCTAAGAGTATCTCTGACCCTGCCCCTAAATT
TTAACTCAAACAAGTCCTCAAAATTTAACTCCTCAAATTTTAAAAGTATGAAAGTGCTCAACTAGCCCTATT--------
------------------CATAAACTTAACTCCCACCAGGACTGGCCATACCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAC------------------------
--------AGATATGGCAACGTCTATTCCTGGGTGGCGT-CACCACACCGTAGAGCGATCTTGCCTAGAAGAGCACCGGC
CGTGCCACGCCGGAGTAAGCCGGTGCCGCATTTGGTTCGCTGGCACGGCATGCAGTCTAAGGCATGGTCTTGGATTTACG
CGGCCAACCACAACTTCTACTGGTAGATTAATGTAAAAACTC-CCAAGCAAAACAATGGGGTCTCCTATG----------
ACTGCACAACACGGAATTCGAATAAAAA-GCAAAACATGGTCTCCATCATCTTAACAGACTTCTTT
>SNPs
--------------------------------------------------------------------------------
--------------------------------S-----------------------SS---------SS-SSSSSSSSSS
S--S--------------S--------------------------------S-------------------SSSS-----
------------S--S--------------------------S------------S-----------------------S
---------------------------S--S---------S---------S-----------------S------S----
------SS-----------------S------S----------------------------------SSS----------
---------------SSS---------------------SSS--------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------SS-----------------------S----S----S------------------------
------------------S----------------SSSSS-S--S------S----------S-----------------
------SS----------------------------------S--S----------------------------------
S-------------S-----------------------------------------------------------------
-SS----------------S-----------------------------------------------------S------
--------------------------------------------------------------------------------
--S-----------------------S---------------------------S----S--------S-S---------
-----------------SSS----S-----------------S----S-----------------S--------------
--------------------------------------------------------------------------------
-------------------------------------------------------S-----S------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S---S-
--S-----------------------------S-----------------------------------------------
---------------------------------------------S--S---------------S---------------
S-----------------------------------------S-------------------------------------
-----------------------------------------S--------S--SSSSS----------------------
-------------------------S-------------S----------------------------------------
-S-----S----S---S--------------S------------------------------------------------
-------------------S-------S------------------------S-----------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS------------S---------------------------------------------------
------------------S---------------------------------S-S-S-------S---S-------S--S
---S-SSS-SSS----------S--------S----------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------SSS---------------------------------------------------------
--------------------------S----------------------------------S------------------
--------------------------------------S-------------------------------------S---
------------------------------S-------------------------------------------------
---------------------------------------------------------------------------S--SS
SSSSSSSSSSSSSSSSSSSS---S--------------------------------------------------------
-----------------------------------------------------------------S-SSSSSSS------
-------------------S------------------------------------------------------------
-----------------------------------S------------------------------------------S-
---S---------------S-----------S----------------------------------S------------S
---------------------------S-------------S----------S------S------S-------------
-------------SS---------------S---------------------------------S---------------
----------S--------------S--S-------S----S----------------------S---------------
---------------------S-----------------SS---S--------S----S-S-S--SS-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------S---------------------S-----S---------------------------S---
------------------------------------------------------------------
>forward_137
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-------------------------------------TAGCCTCTCCTCCCTCCAAG-----------------------
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>reverse_1755
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--------------------------------------------------------------------------TTCCAG
TCAGACCTCGTCCA------------------------------------------------------------------
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------------------------------------------------------------------
>forward_151
--------------------------------------------------------------------------------
---------------------------------------------------TCCAAGCCAAGAAGAGAGCC---------
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>reverse_1963
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------------------------------------------TAAATGCAAACGCCAGAGGC------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_741
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CATTGGCCTCCCTGTTCCTC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_2419
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CCTGCAAGAGCTCATACCCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_766
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCATAGCCCAGCTGCTTTTT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_2477
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------AGCC
AACGTACGTACCAGTT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_2419
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
CAACGAGAAGATGCGAGCC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_3600
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
TACTGCCATTGCGACCAGA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
