>input_sequence_41544
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------------------------CTCTG---CTACCTCTCACTTTCTCTCGAACCTGGCCGTCTGTCTGCCTGCCTGCC
ACCCATCCTTGCACTGCTTACAGTGAGGA-----------GAGTGAGCTCGATCGGTCGGCCATGGTTGAGGCGGCAGCT
GCAGTGGCGGAGGAGGAGCATGACGCGGCGGTGCGGGAGTACGACGACGTCCGCGACCGCGGCGGCGTGGAGGAGGTGGA
GCGGGAGTGCGAGGTGGGGTCCAGCGGCGGCGGCGGCGGCGGCCAGATGTGCCTCTTCACGGACCTCCTCGGCGACCCGC
TCTGCCGCATTCGCAACTCGCCGGACTTCCTCATGCTGGTACGTATTATTTTTCTTTTTGAGGAAGTATTCGTACGTGCC
TACAGAACAA------------------------TGGCTGCGTTCTCCGTTCGT--ACTGTATATCCGTTTTGCCTTTTT
CCTCCGCTCGTTTAATTTCCTGTCGCTTCGGCGTTGGCCCACTCCCGCCTCTCTCGAAAACTAATTAACTCGAAACGCAT
GTTTGAACCGCCCTGATATGGAAAGGTCGCGGAGACAGCAACCGGCAGCGCCGGCGGCGGCGGCGGCGGCGCCGAGATAA
TCGGCCTCGTCCGCGGCTGCGTCAAGTCCGTCGTCTGCGGCGGCTCCCACTC------CAAGGACCCCATCTACACCAAG
GTCGCCTACATCCTCGGCCTCCGCGTCTCACCCAACCATCGGTACGTGCATAATATACCATCATCATCATCATCATCATC
ATCGACATGCAGCTATTTTCACTGGATTCCAATATTCGTACGTATACCAGCCTTCTGTAACTTTGGAATGCT----ATGT
GCGCAGGAGGAAAGGGGTGGGGAGGAAGCTCGTGGAGAGGATGGAGCAATGGTTCCGGCAGAAGGGCGCGGAGTACTCGT
ACATGGCGACGGAGCAGGACAACGAGGCGTCCGTGCGCCTCTTCACCTCCCGCTGCGGCTACTCCAAGTTCCGCACGCCG
TCCTTGCTCGTGCACCCGGTGTTCCGCCACGCCCTCAAGCCCTCGCGCCGCGCCTCCATCGTGCGCCTCGAGCCTCGCGA
CGCCGAGCGCCTCTACCGCTGGCACTTTGCCGCCGTCGAGTTCTTCCCCGCAGACATCGACGCCGTGCTGTCCAACGCCC
TGTCACTCGGCACGTTCCTGGCACTGCCGGCGGGCACGAGTTGGGACGGGGACGTCGAGGCGTTCCTCGCCGCGCCGCCG
GCATCGTGGGCGGTGCTGAGCGTGTGGAACTGCATGGACGCCTTCCGCCTCGAGGTGCGTGGCGCACCCCGCCTGATGCG
CGCCGCGGCCGGCGCAACGCGGCTGGTGGACCGGGCGGCGCCGTGGCTCCGGATACCCTCCATCCCGAACCTCTTCGCGC
CGTTCGGGCTCTACTTCCTCTACGGCCTGGGCGGCGCCGGACCGGGGGCGCCGCGGCTGGTGCGCGCGCTGTGCCGGCAC
GCGCACAACATGGCCCGACGAGGCGGCTGCGGCGTGGTGGCCACCGAGGTGGCCGCCCTCGAGCCCGTGCGCGCGGGGGT
GCCGCACTGGCCGCGGCTCGGCGCCGAGGACCTCTGGTGCATCAAGCGGCTCGCCGACGGCTACAACCACGGCCTGCTCG
GCGACTGGACCAAGGCGCCGCCCGGGCGCTCCATCTTCGTCGACC-----------------------------------
------------------------------------------GGCCTGCTCCTTCCAGAGCACTCTGCCGTGCCAGTGTT
CCCTCCCGAACCTTCTGAGTTCCAAGGACGCGGTGCATCACATTTTGCCGTACGTACGTA-GAGTGCTCTCTGTTTCAAC
TTGGTCAAGTTCAGATAGATGTGCGGTTACAGCTCTCTG---GTCGAG---AGAACATGAGCTG----------------
---------ACTTTGTCGACAGAGCTTTTTTTTTTTGAGAAACTTGTCGACAGAGCTGAGTAGCAGACCAGAGTGAAA--
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---------------------------------------
>chr5D_1_TraesCS5D01G411300
ATCTCTGTTATAAGTAGCAGCCCTGTCAGAGCGGCAACTTGGCCGCTTGCTCGCCTCCTTGGAGGCAGCTTGTCCTGGGT
CTGGCAAGGCGATTGGCTGCTTCCTAGCGGAAGAGGTTTCTACGGGCACAATAAAGAAAAGGAAGATGGCTCTCAGGACC
ATAG-CACGAAGAGTGACGCCATTGATAAGGCGTCAGTGGCTGCTTAATGGAGGGTACTCAGTCCCATCGTCCTCCATGT
GTGTCTGGCTCATCTCCATGGATTTGGTGGCGTCCTATGTATTCAACCTTAATTTTGTTGAGGGTTTCTTTGAGACATTG
AAGTGCGAGGGTTCGTGGTTGTTACATATTATGTATGTTTGTCGGGTTAACCGTGAGGTCATGGAGTTTGTTTCTTAGCA
AGTACTAATTAAAATACAAAAGATAATTGTTTTAGAGAGTAGTCCACGTGTGTTCTATATGTATCGTTTTTTGTCTGGTT
TTCTGTTAATTAAGTGGGTAATTCTCTTCTTCTTAATTACTAATTGATGC-----TTTTGCGTCCTTTTCCAATAAAAAC
AAACAACCAGTAGGCAGCATCGGAGCACT--GAAGCAGTGTGGCCACCCAGCCACACTCCCGCTCGTCCTTTT-------
------TGCGCTTCCTGTGGCCAGATCGCTACTCTGATCCAT-CTAGTCGTAGCTGCCCTTCCTCCTCGTCGCCAATTAA
AAGGCCTACGGCCCCGGAGGGCCTCGCTCCGAGCTCCACAGCCTTTATTCCCCAATTAAA--CCCTTCGCTTCCCAAGCT
TTTAAGATGCGACTAGTGGCCACTCCTCTCCGAATCGGCCGTACCGATTCCTAA--TAACCATTT-------------CA
GTGTATGCGTCGTGGTAACTGAGACGGC----GGCAGGCAGGCACGCAAAAGAGCGCCTCCGCCTTCCCCCGCTCTCACG
TGGTTCACACCCGCGCCCTCCCCTC--------------------CTCGCTTGCCCCGCCGCCTAGC-TATATATCCAGT
CTCGCCAAGCCAAGCCCTCAGCTCCTCTG---CTACCTCTCACTTTCTCTCGAACCTGGCCGTCTGTCTGCCTGCCTGCC
ACCCATCCTTGCACTGCTTACAGTGAGGA-----------GAGTGAGCTCGATCGGTCGGCCATGGTTGAGGCGGCAGCT
GCAGTGGCGGAGGAGGAGCATGACGCGGCGGTGCGGGAGTACGACGACGTCCGCGACCGCGGCGGCGTGGAGGAGGTGGA
GCGGGAGTGCGAGGTGGGGTCCAGCGGCGGCGGCGGCGGCGGCCAGATGTGCCTCTTCACGGACCTCCTCGGCGACCCGC
TCTGCCGCATTCGCAACTCGCCGGACTTCCTCATGCTGGTACGTATTATTTTTCTTTTTGAGGAAGTATTCGTACGTGCC
TACAGAACAA------------------------TGGCTGCGTTCTCCGTTCGT--ACTGTATATCCGTTTTGCCTTTTT
CCTCCGCTCGTTTAATTTCCTGTCGCTTCGGCGTTGGCCCACTCCCGCCTCTCTCGAAAACTAATTAACTCGAAACGCAT
GTTTGAACCGCCCTGATATGGAAAGGTCGCGGAGACAGCAACCGGCAGCGCCGGCGGCGGCGGCGGCGGCGCCGAGATAA
TCGGCCTCGTCCGCGGCTGCGTCAAGTCCGTCGTCTGCGGCGGCTCCCACTC------CAAGGACCCCATCTACACCAAG
GTCGCCTACATCCTCGGCCTCCGCGTCTCACCCAACCATCGGTACGTGCATAATATACCATCATCATCATCATCATCATC
ATCGACATGCAGCTATTTTCACTGGATTCCAATATTCGTACGTATACCAGCCTTCTGTAACTTTGGAATGCT----ATGT
GCGCAGGAGGAAAGGGGTGGGGAGGAAGCTCGTGGAGAGGATGGAGCAATGGTTCCGGCAGAAGGGCGCGGAGTACTCGT
ACATGGCGACGGAGCAGGACAACGAGGCGTCCGTGCGCCTCTTCACCTCCCGCTGCGGCTACTCCAAGTTCCGCACGCCG
TCCTTGCTCGTGCACCCGGTGTTCCGCCACGCCCTCAAGCCCTCGCGCCGCGCCTCCATCGTGCGCCTCGAGCCTCGCGA
CGCCGAGCGCCTCTACCGCTGGCACTTTGCCGCCGTCGAGTTCTTCCCCGCAGACATCGACGCCGTGCTGTCCAACGCCC
TGTCACTCGGCACGTTCCTGGCACTGCCGGCGGGCACGAGTTGGGACGGGGACGTCGAGGCGTTCCTCGCCGCGCCGCCG
GCATCGTGGGCGGTGCTGAGCGTGTGGAACTGCATGGACGCCTTCCGCCTCGAGGTGCGTGGCGCACCCCGCCTGATGCG
CGCCGCGGCCGGCGCAACGCGGCTGGTGGACCGGGCGGCGCCGTGGCTCCGGATACCCTCCATCCCGAACCTCTTCGCGC
CGTTCGGGCTCTACTTCCTCTACGGCCTGGGCGGCGCCGGACCGGGGGCGCCGCGGCTGGTGCGCGCGCTGTGCCGGCAC
GCGCACAACATGGCCCGACGAGGCGGCTGCGGCGTGGTGGCCACCGAGGTGGCCGCCCTCGAGCCCGTGCGCGCGGGGGT
GCCGCACTGGCCGCGGCTCGGCGCCGAGGACCTCTGGTGCATCAAGCGGCTCGCCGACGGCTACAACCACGGCCTGCTCG
GCGACTGGACCAAGGCGCCGCCCGGGCGCTCCATCTTCGTCGACC-----------------------------------
------------------------------------------GGCCTGCTCCTTCCAGAGCACTCTGCCGTGCCAGTGTT
CCCTCCCGAACCTTCTGAGTTCCAAGGACGCGGTGCATCACATTTTGCCGTACGTACGTA-GAGTGCTCTCTGTTTCAAC
TTGGTCAAGTTCAGATAGATGTGCGGTTACAGCTCTCTG---GTCGAG---AGAACATGAGCTG----------------
---------ACTTTGTCGACAGAGCTTTTTTTTTTTGAGAAACTTGTCGACAGAGCTGAGTAGCAGACCAGAGTGAAAAC
CTGGCGACCTTTTTGGTGCCTTTGGGCCGCTTTTTCG-GCTTTCCGTGGCAATTACTGGCTGAAACTTAGGCCCGCTTCG
TAGATTTGCTGCTTTTCTGCGCTCTGCGTC------GACGCATCCCCTTCCCCGTCTATGTCA---GATCCTGCTTTTGT
TGGTTCGATGATGAGCCCGGGACAGGGCTCCGGACTCCGGACTTGTTCTGGATTCCGCTGCGTGGTTTACGTGTGACCCG
CAGGCTTGGCTTCACCGGCCGGCCCCCCCCCCC-----------------------------------------------
-------------------------------------------------------------------GTTGGAGGTCGAC
CGCGGGGATTCACGACACATATCAGCCGACAACAGAGCAGGATAA-G-AGCCCGGGACATTTGCTAGTGGGGTGAAATTC
GATAATGATTCCACTTTATGTCTTTTAGTACTCCGTACATAG----TACCGGTCCCTTTTTTTCA-----------CCGC
ATATGTCGAGTTTTTCACACATGTTATCAGTGTGTCTGGCTCGGTTTGGTTCAGAAAACCACTGCTGCTAGAATCAGCAA
CGTCCAGGCTGCTCT---------GGTCGTAAGCCCAAACCGGACGTACCAGAG-TAATGATTGGCCCCGTACCGTGCAA
TGGACAC-ACAGAGAGCGATGCATGCTGGTAGTAGTACGATCCGGCGGCTGATACTGTTCCCGCGCTACAGATTTGCAGG
TGTCATTGCTAGCAGTAGTACTGCAACAGACTGAACTCCCTGGCAGTATGT----CCAAGACTTTCCCCGGCGGGGGGTC
ACGGCGAATTGACTCCACAGAGCAGCCAGCAGACGTGAGCGCACGGACTCCACACGGCGGCGAGCGCGAAAGGGACGCCG
GATTTATCAGGAGGTGGCT-----GCCGTGCGCCACATACGTAAAGATCGACCGCGATCGCTTGCTCATCGGGTCGCCGT
CGTGTGTCTCCCAAGTGGATCCGGGTTAAATGAAGCGCGGATGTTGACGACGAGGAGAAGGCCCCGGGCCCCTGGCCGGT
GCGTGCACTGTGGGTGTGCCCTGGTCGACCGACTGCCGT
>chr5B_1
ATCTCTGATATATGTAGTAGCCCCGTCACAGCGGCAACTTGGCCACTTGCTCGCCTCCTTGGAGGCAGCTTGTCCTGGGT
CTGGCAAGGCGATTGCTTGC-TCCTAGCATAGGAGGTTTCTACATGCACAATACAGAAGGTGAAGAAGGCTGTCAGGACC
ATAGGCAAGAAAAGTGGCGTCATTGGTAAGGCATCACTGACTGCTTAATGAAATATACTCAGTTCCGTCATCCTCCATCT
CCATCTGGCTCATCTCCGTGGATTTGGTGGCATCCGATGTATTCAATCTTGATTTCGTTGAGGGTTTCTTCGAGACATTG
ATGTGCGAGGGTTCGTGGTTGTTACATGTTATGTATGTTTGTCGGGTTGATCGTGGGGTCATGGAGTTTGTTTCTTAGCA
AATAATTTGCAC-------------------------------------GTGTTCTGTATGAT--GTTTTTTCGTCCGTT
TTTTGTTAATTAACT------TTCTCTTCTTCTTAATTAATTGATGACCCAATTTTTTTGCCACCGTTTCAAAAAAAAAA
AACAGTAACCAGTACAGCATCGTAGCACTGAGAAGCAGTGTGGCCACCCAGCCACACTCCCGCTCTCCTCTCCCCCTCTC
CTTCCCTGCTCTTCCTGTGGCCAGATCGCTACTCTGATCCATCCTAGTCGTAGCCGCCCTTCCTCCTCGTCGCCAATTAA
AAAGCCTACGGCCCCGGAGCAACTCGCTCCGAGCTCCACAGCCTTTATTCCCCAATTAAA--CC-TTCGATTCCAAAGCT
TTTAAGATGCGGCTAGTGG-CACTCCTCTCCGAATCGGCCGTACCGATTCCATTCCTAACCATTT-------------GA
GTGTGTGCGTCGTGGTAACTGAGACGGCGGCAGGCAGGCAGGCACGCAAAAGAGCGCCTCCGTCTTCCCCCGCTCTCACG
TGATTCACACCCGCGCCCTCCCC------------------CCTCCTCGCCTGCCCCGCCGTCTAGCCTATATATCCAGT
CTGGCCAAGCCAAGCCCTCAGCTTCTCTGCTACTACCTCTCACTTTCTCTCGAACCTGTCC------------GCCTGCC
ACCGGTCCTTACACTGCTTACAGTCAGGA-----------GAGTGAGCTCGATCGCTCGGCCATGGTTGAGGCGGCAGCT
GTAGTGGCAGAGGAGGAGCATGACGCGGCGGTGCGGGAGTACGACGACGTCCGCGACCGCAGCGGCGTGGAGGAGGTGGA
GCGGGAGTGCGAGGTGGGGTCCAGTGGCGGCGGCGGCGGCG---AGATGTGCCTCTTCACGGACCTCCTCGGCGACCCGC
TCTGCCGCATTCGCAACTCGCCGGACTTCCTCATGCTGGTACGT-----------------------AAGTGCGTATACC
GGTATACGCACGAACGCACGCTCGGAACACCGACTGGCTGCGTTTTCCGTTCATACACTGTATATCCGTTTTGCTTTTTT
CCTCCTCTCGTTTAATTTCCTGTCGCTTCGGCGTTGGCCCACTCCCGCCTCTCTCGAAAACTAATTAACTCGAAACGCAT
GTTTGAACCGCCCTGATATGGAAAGGTCGCGGAGACAGCAACCGGCA------GCGGCGGCGGCGGCGGCGCGGAGATAA
TCGGCCTCGTCCGCGGCTGCGTCAAGTCCGTCGTCTCCGGCGGCTCCCACTC------CAAGGACCCCATCTACACCAAG
GTCGCCTACATCCTCGGCCTCCGCGTCTCACCCAATCATCGGTACGTATAATCTCGTT-ACCATCGTCATCAAGAAAGAA
ACATGCAACTTATTTGAA-CGAACCAGA--------------------------CTGTAACTTGGAACGCTATGGAATGT
GCGCAGGAGGAAAGGGGTGGGGAGGAAGCTCGTGGAGAGGATGGAGCAATGGTTCCGGCAGAAGGGCGCGGAGTACTCGT
ACATGGCGACGGAGCAGGACAACGAGGCCTCCGTGCGCCTCTTCACCTCCCGCTGCGGCTACTCCAAGTTCCGCACGCCG
TCGTTGCTCGTGCACCCGGTGTTCCGCCACGCCCTCAAGCCCTCGCGCCGCGCGTCCATCGTGCGCCTCGAGCCCCGCGA
CGCCGAGCGCCTCTATCGCTGGCACTTTGCCGCCGTCGAGTTCTTCCCCGCCGACATAGACGCCGTGCTGTCCAACGCCC
TGTCGCTCGGCACGTTCCTGGCACTGCCGGCGGGCACGAGTTGGGACGGGGACGTCGAGGCGTTCCTGGCCGCGCCGCCG
GCTTCGTGGGCGGTGCTGAGCGTGTGGAACTGCATGGACGCCTTCCGCCTCGAGGTACGTGGCGCACCCCGCCTGATGCG
CGCCGCGGCCGGCGCAACGCGGCTGGTGGACCGAGCGGCGCCGTGGCTCAGGATACCCTCCATCCCGAACCTCTTCGCGC
CGTTCGGGCTCTACTTCCTCTACGGCCTGGGCGGCGCCGGGCCGGAGGCGCCGCGGCTGGTGCGCGCGCTGTGCCGGCAC
GCGCACAACATGGCCCGACGCGGCGGGTGCGGCGTGGTGGCCACCGAGGTCGCCGCCCTCGAGCCCGTCCGCGCCGGGGT
GCCGCACTGGGCGCGCCTCGGCGCCGAGGACCTCTGGTGCATCAAGCGGCTCGCCGACGGCTACAACCACGGGCTGCTCG
GCGACTGGACGAAGGCGCCGCCCGGGAGCTCCATCTTCGTCGACCCCAGAGAGTTTTAGCTTCATTTTCAGTTTTCCTTA
ATTAGACCATGTAGTTTTTTTTTTTGCTCCTCCGTCTGATCCGGCCTGCTCCTTCCAGAGCACTGTGCCGTGCCAGTGTT
CCCTCCCGAACCTTCTGAGTTCCAAGGACGCAGTACATCACATTTTGCCGTACGTACGTA-GAGTGCTCTCTGTTTCAAC
TTGTTTACGTTCAGATAGATGTGCGGTTACAGCTCTCTGCAGGTCGAGCAGAGAACATGAGCTGCTGCTTTTTTGTGCGG
TTAACAGCAACTTTGTCGACAGAGCTGTGTAGT--------------------------GTAACAGACCAGAGTGAAAGC
CTGGCGGCCTTTTTGGTGCCTTTGGGCCGCTTTTTTT-GCTTTCCGTGGC-ATTACTGACTGAAACTTCGGCCCGCTTCG
TAGATTTGCT---------------------------------CCCCTTCCCCGTCTATGTCATCAGATCCTGCTTTTGT
TGGTTCGATGATGAGGCCGGGACAGTGCTCTCGACTCCGGACTTGTTCTGGATTCCGCTGCGTGGTATACGTGTAGCCCG
CAGGCTTGGCTTCACCGACCGGCCCCCCTAGGCCTTGTTCGTTTAATCCTCCTCCCAAGGGGATTGGAGTGGATTGGAGA
GGAATTTGGCTTGTAGGGGATCTAATCCCCCTCACAAACCACCTCAACCGAACAAGGCCCCACTGGAGTTGGAGGTCGAC
CGTGGGGATTCACAGAG-----CAGCCGACAACAGAGCAGGATAATG-AGCCCGGGACATTTGCTAGTGGGATGAAATTC
GATAATGATTCCCCTTTATGTCTTTTAGTACTCCGTACATAG----TACTGCTACTCTGCTAGTATCTTTTCCCCCCGGC
ATATGTCGAGTTTTTCACACATGTTATCAGGGTGTCTGGCTCGGTTTGGTTTAGAAAACCATTGCTGCTAGAATCAGCAA
CGTCCAAACTGGTCT---------GGTCGTAAACCGAAACCGGACGCACCTAAG-TAATGATTGGCCCCGTACCGTGCAA
TCGACAC-ACAGAGAGTGATGCATGCTGGTAGTAGTACGATCGGGCGGCTGATACTGTTCCTGCGCTACAGATTTGCAGG
TGTCATTGC---CAGTAGTACTGCAACAAACTGAACTCCCTGGCAGTATGT----CCAAGACTTTCCCCGGCGGCGGGTC
ACGGCGAATTGACTCCACAGAGCAACCAGCAGACGTGAGCGCACGGACTCCACACGACGGCGAGCGCGAAAGGGACGCCG
GATTTATCAGGAGGTGGCC-----GCCGTGCGCCACATACGTGAAGATCGACCGCGATCGCTTGCTCATCGGGTCGCCGT
CGTGTGTCTCCCAAGTGGATCCAGGTTAAATGGAGCACGGATGTTGACGAGGAGGAGAAGGCCCCGGGCCCCCGGCCAGT
GCGTGCACTGTGAGTGTGCCCTGGTCGACCGACTGCCGT
>chr5A_672
CTGCCTTCCACCTCG-----------------------------------------------------------------
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-------------------------------------------------------------------CGTCGCCAATTGA
AAAGCCTACGGCCCCGGAGCGAGTCGCTCCGAGCTCCGCAGCCTTTACTGCCCAATTAAAACCC-TTGGCTTCCAAAACT
TTTAAGATGCG-CTAGTGGCTACTCCTCCCCGAATCGGCCGTACCGATTCCTAAGCATTTCATTCCAGTGCGTGGGCGCA
CTGGGTGGGTCGTAGTAACTGAGACGGCGGCAGGCA--------CGCGAAAGAGCGCCTCCTCCTTCCCG-GCTCTCACG
TGATTCATACCCGCGCCCTCCCCTCGTCCGGGCCGGGCCCCCCTCCCCGCCTGCCCCGCCGTCTAGC-TATATATCCAAA
TCGCCGAGCCTCCAC--------------CCCCTCCATCTCCCTTTCTCGCGAGCTCGTCCGTT--------TGCCTGCT
ACCCATCTTTGCACTGCTTACAGTCAGAGAGTGAGTGAGTGAGCGAGCTCGATCGGTCGGTCATGGTTGAGGC-------
--AGTGGCGGAGGAGGAGC------CGGTGGTGCGGGAGTACGACGACGTCCGCGACCGCGCCGGCGTGGAGGAGGTGGA
GCGGGAGTGCGAGGTGGGGTCCA---GCGGCGGCGGCGGCG---AGATGTGCCTCTTCACGGACCTCCTCGGCGACCCGC
TCTGCCGCATTCGCAACTCGCCGGACTTCCTCATGCTGGTACGT-----------------------ATTCGTACGTGCC
TACAGAACAA------------------------TGGCTGCGTTCTCCGTTCGTAG--TGTATATCCGTTTTGCC-TTTT
CCTCCTCCCGTTTAATTCCCTGTCGCTTCGGCGTTGGCCCACTCCCGCCTCC----AAAACTAATTAACTCGAAACGCAT
GTTTGAACCGCCCTGATATGGAAAGGTCGCGGAGACAGCAACCGGCA------GCGCCGCCGGCGGCGGCGCGGAGATAA
TCGGCCTCGTCCGCGGCTGCGTGAAGTCCGTCGTCTCCGGCGGCTCCCACGCCAAGGACAAGGACCCCATCTACACCAAG
GTCGCCTACATCCTCGGCCTCCGCGTCTCACCCAACCATCGGTACGTGTATAATATAACACCATCATCGTCAAGAAAGAA
ACATGCAACTTCCGACTATCGAACCAGT--------------------------TTCTAACTTGGAATGCGATGGTGCGC
ATGCAGGAGGAAAGGGGTGGGGAGGAAGCTCGTGGAGAGGATGGAGCAATGGTTCCGGCAGAAGGGCGCGGAGTACTCGT
ACATGGCGACGGAGCAGGACAACGAGGCGTCCGTGCGCCTCTTCACCTCCCGCTGCGGCTACTCCAAGTTCCGCACGCCG
TCGTTGCTCGTCCACCCGGTGTTCCGCCACGCCCTCAAGCCCTCGCGCCGCGCCTCCATCGTGCGCCTCGAGCCCCGCGA
CGCCGAGCGCCTCTACCGCTGGCACTTTGCCGCCGTCGAGTTCTTCCCCGCCGACATCGACGCCGTGCTGTCCAACGCCC
TGTCGCTCGGCACGTTCCTGGCGCTCCCGGCGGGCACAAGTTGGCACGGGGACGTTGAGGCATTTCTCGCCGCGCCGCCG
GCTTCGTGGGCGGTGCTGAGCGTGTGGAACTGCATGGACGCCTTCCGTCTCGAGGTGCGCGGCGCACCCCGTCTGATGCG
CGCCGCGGCCGGCGCAACGCGGCTGGTGGACCGAGCGGCGCCGTGGCTCCGGATACCCTCCATCCCGAACCTCTTCGCGC
CGTTCGGGCTCTACTTCCTCTACGGCCTGGGCGGCGCCGGGCCGGGAGCGCCGCGGCTGGTGCGCGCGCTGTGCCGGCAC
GCGCACAACATGGCCCGACGCGGCGGATGCGGCGTGGTGGCCACCGAGGTCGCCGCCCTCGAGCCCGTGCGCGCCGGGGT
GCCGCACTGGGCGCGTCTCGGCGCCGAGGACCTCTGGTGCATCAAGCGGCTCGCCGACGGCTACAACCACGGGCTGCTCG
GCGACTGGACCAAGGCGGCGCCCGGGCGCTCCATCTTCGTCGACCCCAGAGAGTTTTAGCTTCATTTTCAGATTTTCTGA
ATTAGATCATGTAGGCTTTTTTTTT-CTCCTCCGTCTGATCCGGCCTGCTCCTTCCAGAGCACTGTGCCATGCCAGTGCT
CCCTCCCGAACCTTCTGAGTTCCAAGGACGCGGTACATCACATTTTTCCGTACGTACGTAGGAGTGCTCTCTGTTTCAAC
TTGT------------------GCGGTTACAGCTCTCTGCAGGTCGAG---AGAACTTGAGCTGCTGCTTT---------
--AACAGCAAATTTTTTTT------------------------TTGTCGACAGAGCTGAGTAGCAGACCAGAGTGAAAAC
CTGGCGGCCTTTTTGGTGCCTTTGGGCCGCTTTTTTTTGCTTTCCGTGGC----------------TTCGGCCCGCTTCG
TAGATTTGCTGCTTTTTTGCGCTCTGCCTCTGCGTTGACGCATCCCCTTCCCCGTCTATGTCA---GATCCTGCTTTTGT
TGGCTCGACGATGAGCCCGGACTTGTAAATGGATG-------------------CCGCTGCGTGGTTTACGTGTAACCCG
CAGGCTTGGCTTCACCGGCGG-----CCCCCCC-----------------------------------------------
-------------------------------------------------------------------GTTGGAGGTCGAC
CGTGGGGATTCACACCACAGATCAGCCGACAACAGAGCAGGATAATGGAGCCCAGGACATTTGCCAGTGGGGTGAAATTC
GATAATGCTTCCACTTTATGTCTTTTAGTACTCCGTAGATAGATAGTACCGGTGCCTTTT------------CCCCCCGC
ATATGTCGAGTTTTTCACACATGTTATCAGTGTGTCTGGCTCGGTTTGGCTCAGAAAACCATTGCTGCTAGAATCAGCAA
CGTCCAGTCCAGACTGGTCTGTTCGTTCGTAAAACCAAACGGCACGGACCTTCCATAATGATTGGCCCCGTACCCTGCAA
TCGACAAAACGGAGAGTGATGCATGCTGGCAG-AGTACGATCGGGCGGCTGATACTGTTGCTGCGCTACAGATTTGCAGG
TGTCATTGCTC------GTACTGCAACAAACTCAACTCCCTGGCGGTATGTATGTCCAGGACTTTCCCCGGCGGCGGGTC
ACGGCGAATTGACTCCACAGAGCGGCCAGCAGACGTGAGCGCACGGACTCCACACGACGGCGAGCGCGAAAGGGACGCCG
GATTTATCGGGAGGTGGCCCTGCCGCCGTGCGCCACATACGTAGAGATCGACCGCGATCGCTTGCTCGTCGGGTCGCCGT
CGTGTGTCGCCCAAGTGGATCCGGGTTAAATGAAGCGCGGATGTTGACGAGGAGG-------------------------
---------------------------------------
>SNPs
-------S----S----S-----S----S---------------S-----------------------------------
---------------SS---S-------SS-S-----------SS--------S----SSS-----S----S--------
-------S---S----S--S-----S------S---S--S----------S-SSS--------S--S--S--------S-
SSS--------------S-------------S---S----------S---S----S--------------S---------
-S-------------------------S--------------------S-S----S------------------------
-S--S-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S----SSSS-------SSSSS---
--S----------S-SSSSSS------------------S-SSS---SS------------SS--S----S--S-----S
--SSSSSSSSSSSS--------S------------------------------------------SS-SS-SS-------
---------S--------------------------------------------S-------------------------
--S----------------S-S------------------------------------------S---------S-----
-----------S--------------------------------------------------------------------
----S---------------------------------------------------------------------------
--S-----------------------------------------------S----------S------------------
--S--------------------S----------------------------------S----SSSSSSSSS--------
------------------------S-------------------------------------------------------
-S------------------------------------------------------------------------------
------------------------S----------------SSS------------------------------------
--------------------------------------------SSSSSSSSSSSSSSSSSSSSSSS-------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-----------------------------------------------SSSSSS-------------------S-------
------------------------------------S-------------------------------------------
------------------------------------------------S--------S--S-----------SS-SSSSS
-SSSS--SSSSS---S-S--SSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSS---------S-S-SSSSS--------
--------------------------------------------------------------------------------
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--S-----------------------------------------------------------------------S-----
---------------------------------------------------S----------------------------
----S---------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
---------------------------------S----------------------------------------------
----------------------------------------S---------------------------------------
--------------------S-----S-----------------------S-----------------------S-----
----------S----S--------------------------------------------------------S-------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
----------------------------------S---------------------------------------------
---S-S-S------------------------------------------------------------------------
--------------------------S-S-SS-SSSSSSSSSS-------------------------------------
------S----------------------------SS-------------S-------S---------S-----------
----------------S----------S----------------------------------------------------
-------------------------S----S-------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S----------SS----S------------------------------------------------------------
-----------------------------------------------------S-------SSS----------------
-------------------------------------------------------------S------------------
-------S---S--------------------S-------------S---SS----------------------------
-S--------------S-------------------------S------------------S------------------
----------SS----------------S---------------------------------------------S-----
--------------------------------------------------------S-----------------------
------------------S-------------------------------------------------------------
--------------------------------------------------S---------------------S----S--
------------S--------------------------
>forward_239
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-----------------------------------------------------------CAGTCCCATCGTCCTCCATG-
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>reverse_1912
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-----------------------------------------------------------------------TATGTGCGC
AGGAGGAAAGG---------------------------------------------------------------------
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>forward_241
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-------------------------------------------------------------GTCCCATCGTCCTCCATGT
G-------------------------------------------------------------------------------
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>reverse_2212
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---------------------------------------------------AGACATCGACGCCGTGCT-----------
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>forward_272
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------------TCTCCATGGATTTGGTGGCG------------------------------------------------
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>reverse_2323
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ATCGTGGGCGGTGCTGAG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>forward_276
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CATGGATTTGGTGGCGTCCT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>reverse_2713
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CCTGCTCG
GCGACTGGAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>forward_633
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CACTCCCGCTCGTCCTTTT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>reverse_3157
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GGCTTTCCGTGGCAATTACTG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
