>input_sequence_41524
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-------------------------------------------------------------ATGGACCCCCGCCGCTTCC
TCTGCTGCCTCTTGCTCGCCCTCGCCCTCGCCTTCCGCCGCTGCGGCGCGCAGGGCGCCGCCAACGGCACCGGGCGCTTC
GCGTGCCTCGTGCCGGCCCCGTGCGACACGTTCGTCCTGTACCGCACGCAGGCCCCGGGGTCCCTCGACCTCGGCGCCAT
CTCGGACCTCTTCGGCGTGAGCCGGGCCATGATCGCCAGCGCCAACGGCCTCAGCCTCGACGCCGAGGGCGCGGCGCTGC
TGCCCGACCAGCCGCTGCTCGTGCCCGTCCGCTGCGGCTGCACCGGCAACCGCTCCTTCGTCAACGTCACCTACCCCATC
CGCTCCGGCGACACCTTCTACGCGCTCGCGCTCACCGGCTTCGAGAACCTCACCACCCCCGACGTCATCCAGGAGCTCAA
CCCGCAGGCGGTCTTCAACAAGCTCAATGTCTCGCAGCTGGTCACCGTGCCGCTCTTCTGCCGGTGCCCCACGCCGGCGG
AGCGGAGCGGCGGGGCGCAGCTGCTCGTCACCTACATGTGGCGACCTGTCGACACCATGTCCGAGGTGAGCAAGCTGATG
AACTCTAGCGCGAGCGCGATCGCTGCGGTGAACAACGTCAGCGCCGACTTCACCTCCACGACGATGCTGCCGATGCTGAT
CCCGGTGGCGCGGCCGCCGGTGCTTCCTCCGCTGCAATATGGCGCGAGCGCGAGCACCGGCGATCCCGGAGTTAGCAAGC
GCTTCTCGGGTGCCACCGTCGCGGCGAGCATCGCCGGGTCTCTCATCGCGGTCGCCGCCTTGTGCGCGGCGATCTTCGCG
TACCGGAGGTACCGCGAGAAGAAGGCCACGGTGCACTCGGCGTCCAGGTTCGCGAGCCCGAGGTTTTGTTTCAACCAGAA
CGCCTACGGGATTCAGAGCAGCAGTTCCATCGCGCGCATGATCAACGGAGGGGACAAGCTGCTCACCAGCGTGTCGCAGT
TCATCGACAAGCCTGTCATCTTCGGCACAGCGGAGATCATGGAAGCGACGATGAACTTGGACGAACGGTGCAGGATCGGC
AGCTCCTACTACCGGGCCAAGCTAGAAGGCGAGGTGTTCGCGGTGAAGCCGGCGAAAGGCGACGTGTCGGCGGAGCTGAG
GATGATGCAGATGGTCAACCACGCCAACCTCATCAGGCTGGCCGGCATATCCATCGGCGCCGATGGGGACTACACCTTCC
TCGTGTACGAGTTCGCCGAGAAGGGCTCGCTCGACAAGTGGCTGTACCAGAAGCCTCCGTCCTCGCTGCCGTCGTCGAGC
TCATCAGCGGACACGCTCTCGTGGAACCAGAGGCTGGGCATCGCGTTCGACGTCGCCAACGGCCTACTATACATGCACGA
GCACACTCAGCCGAGCATGGTGCACGGTGACGTCCGCGCACGGAACATCCTCCTCACCGCGGACTTCAGGGCCAGGATAT
CCAACTTCTCCGTGGCCACGCCGGCGATGGCCGACGCCGCGGCGACGAGCAGCGACGTGTTCGCCTTCGGCCTACTTGTC
CTCGAGCTTCTCTCCGGCAGGACGGCCATGGAGGCGCGCGTCGGCGCGGAGATCGGCATGCTATGGAGGGACATCCGGGC
GGTGCTGGAGGCCGGGGACAAGAGGGACGCCAAGCTGAGGAAGTGGATGGACCCCGCCCTTGGGGACGAGTACTACTTGG
ATGCGGCACTCAGCCTGGCCGGCATGGCGAGGGCTTGCACGGAGGAGGACGCGGCGCGGCGGCCGAAGATGGCCGACGTG
GTGTTCAGCCTCTCGATGCTGGTGCAGCCGTTGCCGGTGGGCGACGCGTTCGAGAAGCTATGGCAGCCCAGCTCGGAGGA
GAACATTAGGATTGTCAATGAAGTGGCAGCCAGATGA-------------------------------------------
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>chr4D_1_TraesCS4D01G238300
CGTCTAGTTGGAGAATAGATAAAGAAGATAGAGCCATTTCTTCTCTTTGTGAAAGGGCTGGTTTCTTTCCGGTTTAATAG
ATGTTTGTAGACTCGAGTGAAAACAAGGGTAACCTGAATCACTTGCGGCGTTCCTCGTTTATGCTGGATTCTTTCCCGTT
TAATAGATGTTTGTAGACTCCAGTGAAAACAAGGGTAACACCTGAATCACTTGCGGCGTTCCTCGTTTATTATGCTTTGG
ACATAGCCCAATGGGATCGTACGGTCTTCCTGCGGCGATACCAGGACCAATCTATCAACTCGGCT---------------
-------------------GGCACACAGATATCTAC----ACGCTGTATCTGTACTGTATATGATTAGTGGGTATTACAG
TTTGCTGCTAAAAGATCGCACAGGGCGCATGAATAACTTGTTGGTTAGCGTGTAC-------------------------
--------AGTAGCTTATTGTATAATCCTGAA-TTTTCCTCTGAAAACGATACCGGTAGTACTCCCTTTAAACTGAGAGA
GAGGGAGTATTATCATCTGGCATACACTTTCTCCAATCAAGGAGACGGCGGACCCGTTCCGCTGTTCCCACTGCAAGTGC
AATCAATCACACACGAAAGCTACCTCCTCCAGTTAACAGAGTATACTACTAATACAGAGTAATCAAACATGGCTGCCTGC
AGAATATAGCAGCCCGCCTCATAGATTACCTGAAGACGCTACCTGCAGAGCGGTGTT-----------------------
-------------------------------TACTCAGCATCAAATCATGCCTGCTTGCAAAA-CTAATCGGGTCTAATG
CAGG----------------------------------------------------------------------------
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--------------------------------------------------CAGGGGAAGGGACGGCATCTGAGTCGCTCA
GCGGGAATTGGAGTGCGGAATCAAAAACTCCAGAGCCGCGACAAAAGCCCACCGCGGTTTATTGACCCGAACAACCACCG
GAGCCAGCCGCCGCCCTGCACGCCACTAGCTACGTATACTAAA-CCGAGCCCACA-CCCCTTGGCCACTTCCACCACCGC
ATTCCCATTCCGCG--GCACACGACACGA----ACCCTGGCCGCGGCACGGAGCGCGCCAAATGGACCCCCGCCGCTTCC
TCTGCTGCCTCTTGCTCGCCCTCGCCCTCGCCTTCCGCCGCTGCGGCGCGCAGGGCGCCGCCAACGGCACCGGGCGCTTC
GCGTGCCTCGTGCCGGCCCCGTGCGACACGTTCGTCCTGTACCGCACGCAGGCCCCGGGGTCCCTCGACCTCGGCGCCAT
CTCGGACCTCTTCGGCGTGAGCCGGGCCATGATCGCCAGCGCCAACGGCCTCAGCCTCGACGCCGAGGGCGCGGCGCTGC
TGCCCGACCAGCCGCTGCTCGTGCCCGTCCGCTGCGGCTGCACCGGCAACCGCTCCTTCGTCAACGTCACCTACCCCATC
CGCTCCGGCGACACCTTCTACGCGCTCGCGCTCACCGGCTTCGAGAACCTCACCACCCCCGACGTCATCCAGGAGCTCAA
CCCGCAGGCGGTCTTCAACAAGCTCAATGTCTCGCAGCTGGTCACCGTGCCGCTCTTCTGCCGGTGCCCCACGCCGGCGG
AGCGGAGCGGCGGGGCGCAGCTGCTCGTCACCTACATGTGGCGACCTGTCGACACCATGTCCGAGGTGAGCAAGCTGATG
AACTCTAGCGCGAGCGCGATCGCTGCGGTGAACAACGTCAGCGCCGACTTCACCTCCACGACGATGCTGCCGATGCTGAT
CCCGGTGGCGCGGCCGCCGGTGCTTCCTCCGCTGCAATATGGCGCGAGCGCGAGCACCGGCGATCCCGGAGTTAGCAAGC
GCTTCTCGGGTGCCACCGTCGCGGCGAGCATCGCCGGGTCTCTCATCGCGGTCGCCGCCTTGTGCGCGGCGATCTTCGCG
TACCGGAGGTACCGCGAGAAGAAGGCCACGGTGCACTCGGCGTCCAGGTTCGCGAGCCCGAGGTTTTGTTTCAACCAGAA
CGCCTACGGGATTCAGAGCAGCAGTTCCATCGCGCGCATGATCAACGGAGGGGACAAGCTGCTCACCAGCGTGTCGCAGT
TCATCGACAAGCCTGTCATCTTCGGCACAGCGGAGATCATGGAAGCGACGATGAACTTGGACGAACGGTGCAGGATCGGC
AGCTCCTACTACCGGGCCAAGCTAGAAGGCGAGGTGTTCGCGGTGAAGCCGGCGAAAGGCGACGTGTCGGCGGAGCTGAG
GATGATGCAGATGGTCAACCACGCCAACCTCATCAGGCTGGCCGGCATATCCATCGGCGCCGATGGGGACTACACCTTCC
TCGTGTACGAGTTCGCCGAGAAGGGCTCGCTCGACAAGTGGCTGTACCAGAAGCCTCCGTCCTCGCTGCCGTCGTCGAGC
TCATCAGCGGACACGCTCTCGTGGAACCAGAGGCTGGGCATCGCGTTCGACGTCGCCAACGGCCTACTATACATGCACGA
GCACACTCAGCCGAGCATGGTGCACGGTGACGTCCGCGCACGGAACATCCTCCTCACCGCGGACTTCAGGGCCAGGATAT
CCAACTTCTCCGTGGCCACGCCGGCGATGGCCGACGCCGCGGCGACGAGCAGCGACGTGTTCGCCTTCGGCCTACTTGTC
CTCGAGCTTCTCTCCGGCAGGACGGCCATGGAGGCGCGCGTCGGCGCGGAGATCGGCATGCTATGGAGGGACATCCGGGC
GGTGCTGGAGGCCGGGGACAAGAGGGACGCCAAGCTGAGGAAGTGGATGGACCCCGCCCTTGGGGACGAGTACTACTTGG
ATGCGGCACTCAGCCTGGCCGGCATGGCGAGGGCTTGCACGGAGGAGGACGCGGCGCGGCGGCCGAAGATGGCCGACGTG
GTGTTCAGCCTCTCGATGCTGGTGCAGCCGTTGCCGGTGGGCGACGCGTTCGAGAAGCTATGGCAGCCCAGCTCGGAGGA
GAACATTAGGATTGTCAATGAAGTGGCAGCCAGATGATATCGGAGCATAACTGAATTTAGCGACTGATCTAGAAAGTTCT
TAGTTTGGGTGTTGCGTGCAGTGATTT-----------------------------------------------------
------------------------------GGTTCGTTTTGTGAATGTGTGTCACTGTAATTTACTGCAATGCTTTGCTT
TACTCTGAAGACCAAAGATCAGGTTTTGTTGCAGTTTCCAGCTGCTCTTATAT---------------------------
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---------------------------------------------------------------TTCTTTTACAGAGGGAG
TACTAGCATTGAGACGCGACAGTCCTTTGTGTTATCTTTTCGCTCTACTTTTATATACCGGGCTT-----AAGCCTAAAA
CTCAATAGACTGAAATTTAATCAAGTTCAGTCGACTGTTCAGCTGTTGATTTTTGCACGAAGATTTGTGCTGGATTAAGC
ATCATCCAATGGACCTCGCGGCATTTTGTCGCACTGTTCGCAACACGTATTTCTATCGGTGGCAGCATCCGTCATTGCTG
ATTGCAGCATGTCATCTCACCGGTCACAACATCTGCTCTCATCGTTCGTAGCACTTCGTCTCGCCGGTCGCAACATCCGT
CATTGATGGTTGTATCATTTAGTTGCACAGCTTGCAGCGTCACTTGTCATTGACTGGAAAACTGTCGCAACAGTTTTCGT
CACCGATTGCAGCATCTAGCCGTGCCGCTCGTAGCAAAACAACTACGCTGATGTCACTCGACTGAGACTTCATTAAGTCT
CAGTCGACTGAGTTCTAGACACACCCTTGATGTATCAGCATGCTAGATTGC----------CCTAGGTGGATTCCAAAGG
ATTGCACCACTTGTCTGGCACTGCTTGTTTGTACAAGTTGTTGTGTTGCACCATGTTTTGTTCTTTTTTATTTTGTACTC
TTAGCCATCGGCTTTTGAGCTTTCTTGTTATTTTTTCAACAGAAAAGAGGCTAGATTGGTTCAAAGGGCATCTATAATTG
GACCTCAAAAGTTAACTATGACTATTTACTAATTATATCAAACAACTAAAAATATAATAATAAAATACCAGCATCCTATC
CATCGAATTAATCACCTGCTCTTTG
>chr4A_1
CGTCTAGCTGGGGAATAGATAAAGAAGATAGAGCTATTTCTTCTCTTTGTGAAAGGGCTGGTTTCTTTCC----------
----------------------------------------------------------------------------CGTT
TAATAGACGTTTGTAGACTCCAGTGAAAACAAGGGTA--ACCTGAATCACTTGCGGC----------------GCTTTGG
ACAGAGCCCA-TGGGATCATACGGTCTTCCGGCGGCGATACCAGGACTAATTTATCAG-----CGCAGCAGCAGTGGTGC
CGGACAAGTTGATCAACTCGGCAGGCACC---CTAC----ACGCTGTATCTGTACTGTATATGATTAGTGGGTATTACAG
TTTGCTGCTAAAAGATGGCACAGGGCGTATGAATAACGTGTTGGTTAGCGTGTATACTCCCTCTAATGTCAAAAACAAAG
ACAGAGGGAGTAGCTTATTGTATAATCCTGGTTTTTTCCTCTGAAAACGATACCGTGGGC--------------------
--------ATTATCATCTGGCATGCACTTTCTCCAATCAAGGAGACGGCGGACCCGTTCCGCCGCTCCCACTGCAAATGC
AATCAATCACACACGAAAGCTACCGCCTCCAGTTAACAAAA------------------TAATCAAACATGGCTGCCTGC
AGAATATAGCAGCCCGCCACATACATTAGCTGAAGACGCTACCTGCAGTCTATAGCTGCCTCATCAGTCGTCATCGTTCG
CCATCGTAAATCAAACAGGCCGGTGTTTTAATACGCAGGATCAAATCATCCCTGCCTGCAAAA-CTAATCGGATATAATC
TCTACTCCTAATGAAACAGTTGGTAGTCTCGCTTTCAGGTTTTTTTTTCGTCCCACCTACCATGGTTTTTTTGGTACCTC
CTCCCACCTTCGCTGGTTTTTTTCATAGATTTTTTTTCGTTCCCTCCCCCACTTCATCGGTTTATTTTCGCTTCACCCTC
TCACACACCGAAAAAAACTGAACGGATCAGAACTTTCCATACTGACACAAATTATTTAGTAATGTCTTTATATAAAAGAA
TCAATCACAATCAATTTCTAAAGATCAAATCTAAATTAATTAATCTTCATAACGTTTGTTTCCTTCCGAATCAGGTCCAT
AACTTTCCTTCCTTGTTTGGGGAGAAACTGTTTGGTAGCAGAGATTAGGAAGCTTCCTATGAGCGTAGTAATAGGAAGTA
TTTTTTTTATGATTCGTTTCCATGCATGATGATAGTAAATTAGGCCAACATTCACCACTATTTATCAACGTCATCAATCG
TGTCCATTCCTACCAGTTTTAAGGAAATCCACTCGCTACGTCTTTTTTATGGGGATCCGCTCGCTACATCGTTGTGGCAC
GTTATTTTCACAAGCAATTCCCCTAAAAAACGCAGCACCCTACCTCGACTTCCCTACCTGGACGCCGCCGCCGCCGCCCA
CCGATCTCGCCGCCTCCCGGCGATCCCCTCCTCCCTCCCGCAGCTCGAACGACCCACTATTTTGGCCACGAGTACCGCCT
GCCTCTTCGCCCATGCGTCGCCCCTCCTCTTCACCATAGCCACGAGCACCATCCGAGGTGGAGCCGCGGCGCCTCCACAG
ATGCGGCGGAGACACCATATCCAGTGGAGACGGCGGTGTAAATCTTCTCCCACTCTGCTTCTTCCCCTGGTTACCGGCCT
GCTCCACCTCCCCTCTGCTTCGTGTGGATCTGCTCATGTGCAGCAGTAAACTTTATTTAGGTAGAACTATTCTTCTAGGC
TTTTTTTGTTACTTACAAATTAACTTTTTGAGCCAATGCATACGGCATGAAGTATTACCTAGAGTTCCTTAATCAATCTG
CTTGTCCATCGTTTCATTTGGTTCAATTACTATCAGCAAGAACGCATTGTGAAACAGTTAGCTTATGAATGTGTGCTCTT
CCTGCATGAAGTATGGGAGGTTTTTTTCGTCCCACCTCCCATGGTTTTTTGGTACCTCCTCCCACCTTCGCTGGGTTTTT
TCGTAGATTTTTTCCGTCCCCTCCCCCCACTTCATCGGTTTATTTTCGCGTCACCCTCTCACACAACAAAAGAAATCTGA
ACAAATCAGAACTTTCCATACTGGCGCAAGTTATTTAGTAATGTAGAATCAATCACGAACAATCTCTAAAGATCAAATCT
AAATTAATTAACCTTACCTTAAATCGCTCAATCACATTAATTAGAAAACAAATAATTGATTTTCAGAAAAAATCGCTCAA
TCACATTAACCTTACCTTAACTCATGGATGGTAATCAATCTCCAAACAAGGGAAACAATACATCGAGGGAGCGGTAAATA
AACTCCCTTTCTTATGACATGTATATGATCTTCCCTTCCCTCTCCGTTGTCGAGCGTTCTTGATTCTCAAGCCCCATGCT
TGGGCTACGTCACTGGGTCGTGACGGTGCCGGAGGACGAGAACGGCGAGGCCGGGTGCCGCGGCACCGCCTTGGCCGCGG
TCAGTGAAGGGGGCGAAGAAGGGCGGCTTCCCTGGCCCTGGGAGTTGGTGCGGTGGAAGCGGCACTTGAAGGACCCGGCG
TGGGTGGCCGGCGCGCAGACGCACTTGGAAGCGAGCCACATCCTTCGCGTATTCTTGGAGCTGTGGCTAGCCGATTTACA
TGAAATTAATTTCCTCAGTTGTGGTGGCAAATATAATACACATAATCCATATTGTTATGCACTAGCGTGTGTGTGAAATA
GATTGATTATGGTCCGTACCCAATAATATGAATATGTGTGTGTTAGAGAGAGGGGGGAGAGAGAGTGAGGAAAAGGAAAG
CAGAGTGTGTGTGTGAAGATTTGATGGTAAAAAAGATGTCAATGTCACTTATATGTATGAGAATATTAGTATTGAACTCT
TAAAGTTAATGTGGCCCCGTTGCAACGCACGGGCGTTGTTCGAGTGGACACAGGAGAGGGGACGGCATCTGAGTCGCTCA
GCGGGAATTGGCGAGCCGAATCAAAAACCCCAGAGCCGCGACAAAAGCCCACCGCGGTTTTTTGACCCGAACAACCC---
GAGCCAGCCGCCGCCCTGCACGCCGCTAGCTACGCATACTAAAACCGAGCCCACACCCCCTTGGCCACTTCCACCACCGC
ATTCCCACTCCGCGCGGCTCACGACACGAACCAACCCTGGCCGCGACACGGAGCGCGCCAAATGGACCCCCGCCGCTTCC
TCTGCTGCCTCCTGCTCGCCCTCGCCCTCGCCTCCCGCCGCTGCGCCGCGCAGGGCGGCGC---------CGGGCGCTTC
GCGTGCCTCGTGCCGGCCCCGTGCGACACGTTCGTCCTGTACCGCACGCAGGCCCCGGGGTCCCTCGACCTCGGCGCCGT
CTCGGACCTCTTCGGCGTGAGCCGGGCCATCATCGCCAGCGCCAACGGCTTCGGCCTCGACGCCGAGGGCGCGGCGCTGC
TGCCCGACCAGCCGCTGCTCGTGCCCGTCCGCTGCGGCTGCACCGGCGGCCGCTCCTTCGTCAACGTCACCTACCCCATC
CGCTCCGGCGACACCTTCTACGCGCTCGCGCTCACCGGCTTCGAGAACCTCACCACCCCCGACGTCATCCAGGAGCTCAA
CCCGCAGGCGGTCTTCAACAAGCTCAATGTCTCGCAGCTCGTCACCGTGCCGCTCTTCTGCCGCTGCCCCACGCCGGCCG
AGCGGGCCGCCGGGGCGCAGCTGCTCGTCACCTACATGTGGCGCCCTGTCGACACCATGCCCGAGGTGAGCAACCTGATG
GGCTCCGACGTCGGCGCCATCGCTGCGGTGAACAACGTCAGCGCCGACTTCACCTCCACGACGATGCTGCCGATGCTGGT
CCCGGTGGCGCGGCCGCCGGTGCTTCCTCCGCTGCAATATGGCGCGAGCCCGAGCACCGGCGATCCCGGAGCCAGCAAGG
GCTTCTCGGGCGCCACCGTCGCGGCGAGCATCGCGGGGTCTCTCGTCGCCGTCGCTGCCCTGTGCACGGCGATCTTCGCG
TACCGGAGGTACCGCGAGAAGAAGGCCACGGTGCACTCGGCGTCCAGGTTCGCGAGCCCGAGGTTTTGCTTCAACCAGAA
CGCTTACGGGATTCAGAACAGCAGTTCCATCGCTCGCATGATCAACGGAGGGGACAAGCTGCTCACCAGCGTGTCGCAGT
TCATCAACAAGCCTATCATCTTCGGTACAGAGGAGATCATGGAGGCGACGATGAACTTGGACGAACGGTGCAGGATCGGC
AGCTCCTACTACCGGGCCAAGCTGGAAGGCGAGGTGTTCGCGGTGAAGCCGGCGAAAGGCGACGTGTCGGCGGAGCTGAG
GATGATGCAGATGGTCAACCACGCCAACCTCATCAGGCTGGCCGGCATATCCATCGGCGCAGACGGGGACTACACCTTCC
TCGTGTACGAGTTCGCCGAGAAGGGCTCGCTCGACAAGTGGCTGTACCAGAAGCCTCCGTCCTCGCTGCCGTCGTCGAGC
TCATCGGCGGACACGCTCTCGTGGAACCAGAGGCTGGGCATCGCGTTCGACGTCGCCAACGGCCTGCTCTACATGCACGA
GCACACTCAGCCGAGCATGGTGCACGGCGACGTCCGCGCACGGAACATCCTCCTCACCGCGGACTTCAGGGTCAGGATAT
CTAACTTCTCCGTGGCCACGCCGGCGATGGCCGACGCCGCGGCGACGAGCAGCGACGTGTTCGCCTTCGGCCTGCTGGTC
CTCGAGCTTCTCTCCGGCAGGACGGCCATGGAGGCGCGCGTCGGCGCGGAGATCGGCATGCTGTGGAGGGACATCCGGGC
GGTGCTGGAGGCCGGGGACAAGAGGGACGCCAAGCTGAGGAAGTGGATGGACCCCGCCCTTGGGGACGAGTACTACTTGG
ATGCGGCACTCAGCCTGGCCGGCATGGCGAGGGCCTGCACGGAGGAGGACGCGGCGCGGCGGCCGAAGATGGCCGACGTC
GTGTTCAGCCTTTCAATGCTGGTGCAGCCGTCACCGGTGGGCGACGCGTTCGAGAAGCTATGGCAGCCCAGCTCGGAGGA
GAACATTAGGATTGTCAATGAAGTGGCAGCCAGATGATATGGAAACAGAACAGAATTTAGAGACTGATCTAGGAAGTTCT
TAGTTTGGGTATTGCGTGCAGTGATTTATTTGGTTCGTTTTGTGAATGTGTGTC--------------------------
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>chr4B_78
-----------------------------------------------------------------------------TAG
ATGTTTGTAGACTCGAGTGAAAACAAGGGTAA------------------------------------------------
---------------------------------------ACCTGAATCACTTGCCGCGGTCCTGGTTT--TATGCTTTGG
ATGGAGCCCA-TGGGATCATACG-TCTTTCGGCGACGATACCGGGACTAGTTGGTCTTATCAACGCAGCAGCAGTGGTAC
CGGACAAGTCGATCAACTCGGCACCCAGATATCTACACGGACGCTGTATCTGTACTGCATATGATCAGTGCACTATACTT
TGCTAATATAAAAGATCGCACAGGGCGCATCAATAACTTGTTGGTTAGCGTGTAGCCTACTGTTTTCCTTACTGCTTAGC
ACA---------------TGTATAATCCTGATTTTTTCCTCTGAAAACGATACCGTGGT---------------------
-----AGTATTATCATCTGGCATACACTTTCTCCAATCAAGGAGACGGCGGACCCGTTCCGCTGCTCCCACTGCAAGTGC
AATCAATCACACACGAAAGCTACCTT---CAGTTAACAAAGTATACTACTAGTACAGAGTAATCAAACATGGCTGCCTGC
AGAATATAGCAGCCCGCCACATAGAGTACCTGAGGAAGCCACCTGCAGTCTATAGCTGCCTCAT----------CGTTCG
TCATCGTTAATCAAACAGGCCGGTGTTTTAATACTCAGGATCAAATCATGCCTGCTTGCAAAAACTAATCGGGTCTAATG
CAGG----------------------------------------------------------------------------
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--------------------------------------------------CAGGAGAAGGGACGGCATCTGAGTCGCTCA
GCGGGAATTGGCGAGCCGAATCAAAAACCCCAGAGCCGCGACAAAAGCCCACCGCGGTTTATTGACCCGAACAACCG---
GACGCAGCCGCCGCCCTGCACGCCACTAGCTACGCATACTAAA-CCGAGCCCACA-CCCCTTGGCCACTTCCACCACCGC
ATTCCCATTCCGCG--GCACACGACACGA----ACCCTGGCCGCGACACGGAGCGCGCCAAATGGACCCCCGCCGCTTCC
TCTGCCACCTCTTGCTCGCCCTCGCCCTCGCCTTCCGCCGCTGCGACGCGCAGGGCGCCGGCAACGGCACCGGGCGCTTC
GCCTGCCTCGTGCCGGCCCCGTGCGACACGTTCGTCCTGTACCGCACGCAGTCCCCGGGGTCCCTCGACCTCGGCGCCAT
CTCGGACCTCTTCGGCGTGAGCCGGGCCATGATCGCCAGCGCCAACGGCCTCAGCCTCGCCGCCGAGGACGCGGCGCTGC
TGCCCGACCAGCCGCTGCTCGTGCCCGTCCGGTGCGGCTGCACCGGCAACCGCTCCTTCGTCAACGTCACCTACCCCATC
CACTCCGGCGACACCTTCTACGCGCTCGCGCTCACCGGCTTCGAGAACCTCACCACCCCCGACGTCATCCAGGAGCTCAA
CCCGCAGGCGGTTTTCAACAAGCTCAATGTCTCGCAGCTGGTCACCGTGCCGCTCTTCTGCCGGTGCCCCACGCCGGCGG
AGCGGAGCGCCGGGGTGCAGCTGCACGTCACCTACATGTGGCGACCTGTCGACACCATGTCCGAGGTGAGCAAGCTGATG
AACTCCAGTGCGAGCGCCATCGCTGCGGCCAACAACGTCACTGCCGACTTCACCTCCACGACGATGCTGCCGATGCTGAT
CCCGGTGGCGCGGCCGCCGGTGCTTCCTCCGCTGCGCTATGGTGCGAGCCCGAGCACCGGCGATCTCGGAGCTAGCAAGG
GCTTCTCGGGTGCCACCGTAGCGGCCAGCATCGCGGGGTCTCTCGTCGCGGTCGCCGCCTTGTGCGCGGCGATCTTCGCG
TACCGGAGGTACCGCAAGAAGAAGGCCACGGTGCACTCGGCGTCCAGGTTCGCGAGCCCGAGGTTTTGCTTCAACCAGAA
CGCCTACGGGATTCAGAGCAGCAGTTCCATCGCTCGCATGATCAACGGAGGGGACAAGCTGCTCACCAGTGTGTCACAGT
TCATCAACAAGCCTATCATCTTCGGCACAGCGGAGATCATGGAGGCGACGATGAACTTGGACGAACGGTGCAGGATCGGC
ACCTCCTACTACCGGGCCAAGCTAGAAGGCGAGGTGTTCGCGGTGAAGCCGGCGAAAGGCGACGTGTCGGCGGAGCTGAG
GATGATGCAGATGGTCAACCACGCCAACCTCATCAGGCTGGCCGGCATATCCATCGGCGCGGATGGGGACTACACCTTCC
TCGTGTACGAATTCGCCGAGAAGGGCTCGCTCGACAAGTGGCTGTACCAGAAGCCTCCGTCCTCGCTGCCGTCGTCGAGC
TCAGT---GGATACGCTCTCGTGGAACCAGAGGCTGGGCATCGCGTTCGACGTCGCCAACGGCCTGCTGTACATGCACGA
GCACACTCAGCCGAGCATGGTGCACGGCGACGTCCGCGCACGGAACATCCTCCTCACCGCAGACTTCAGGGCCAGGATAT
CCAACTTCTCCGTGGCCACGCCGGCGATGGCCGACGCCGCGGCGACGAGCAGCGACGTGTTCGCCTTCGGCCTACTGGTC
CTCGAGCTTCTCTCCGGCAGGATGGCCATGGAGGCGCGCGTCGGCGCGGAGATCGGCATGCTGTGGAGGGACATCCGGGC
GGTGCTGGAGGCCGGGGACAAGAGGGACGCCAAGCTGAGGAAGTGGATGGACCCCGCCCTTGGGGACGAGTACTACTTGG
ATGCGGCACTCAGCCTGGCCGGCATGGCCAGGGCTTGCACGGAGGAGGACGCGGCGCGGCGGCCGAAGATGGCCGACGTC
GTGTTCAGCCTGTCAATGCTGGTGCAGCCGTTACCGGTGGGCGACGGGTTCGAGAAGCTATGGCAACCCAGCTCGGAGGA
GAACATTAGGATTGTCAATGAAGTGGCAGCCAGATGATATGGGAACA-AACTGAATTTAGCGACTAATCTAGGAAGTTCT
TAGTTTGGGTGTTGCGTGCAGTGATTTATTTGGTTCGTTTTGTGAATGTGTGTCACTGTAATTTACTGCAATGCAAACCC
TAAACCCTAAACCCGTGCAGTGATTTATTTGGTTCGTTTTGTGAATGTGTGTCACTGTAATTTACTGCAATGCTTTGCTT
TACTCTGTAGACCAAAGATCACGTTTTGTTGCGGTTTCCGGCTGTAATGGATACTAACTAATTTAGTGATCTAAACGCTC
TTAGACTAGCCACATGGGAGTAACTTCGGTAGTAACATCGAGTCCAACTCAGCTAGTTACTGTAACATCAAATGTCCCAA
TGCAATATGAGTCTATAACCTAATAAATGAAGCTTTGCATGTTATCACACTTATGTTACTACCCACTATTGAGGTAGTAA
CATAGTCTAAGGATATGTGTATGTTACTAGTGTATGTTACTCTCCACTGTGGCTAGTCTTATATTTTTTTACGGAGGGAG
TGCTAACAT-GAGACGCGACAGTCCTTTGTGTTATCTTTTCGCTCTACTTTTATATACCAGGCTTGCTAAAAGCCTAAAA
CTCAATAGACTGAGATTTAATCAAGTTCAGTCGACTATTCAGCTGTTGATTTTTGCACGAAGATTTGTGCTGGACTAAGC
ATCATCCAATGGACCTCGCGGCATTTTGTCACACTGTTTGCAACATGTTTTTCTATCGGTTGCAGCATCCGTCATTGCTG
ATTGCAGCATGTCGTCTCACCGGTCACAACATCTGCTCTCGTCGTTCGTAGCACGTTGTCTCACCGGTTGCAACATCCGC
CATTGGCGGTTGTATCATTTAGTTGCACAACTTGCAACGTCACTTGTCATTGACTGGAAAACTGTTGCAACATTTTTCGT
CACCGATTGCAGCATCTAGCCTTGCTGCTCGTAGCAAAATAACTACGCTGATGTCACTCGACTGAGACTTCATTAAGTCT
CAGTTGACTGAGTTCTAGACACAACCTTGATGTATCAGCATGCTAGATTGCTTATAGTATTCCTAGGTGGATTCCAAAGG
ATTGCACCACTTGTCTAGCACCGCTTGTTTGTACAAGTTGTTGTGTTGCACCATGTTTTGTTCTTTTGTATTTTGTACGC
TTAGCCATCGGCTTTTGAGCTTTCTTGTTATTTTTTCAACAAAAAAGAGGCTAGATTGGTTCAAAGGGCATCTGTAATTG
GACCTCAAAAGTTAACTATGACCGTTTACTGATTATACCAAACAACTAAAAATATAATAATAAAATACCACCATCCTATC
CATTGAATT-ATCACCTGCTCTTTG
>chr4A_2986
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-------------------------------------------------TGTCACTGTAATTTACTGCAATGCTTTGCAT
TACTATGTAGACCAAAGATGACGTTTTGTTGCAGTTTCCAGCTGCGATGGATAA--------------------------
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TACTAGCAT-GAGACGCTACAGTCCTTTGTGTTATCTTTTCGCTCTACTTCTATATACCGGGCTTGCCAAAAGCCTAGAA
TTCAGTAGACTGAGATTTAATCAAGTGAGCATGGAGCGTTGACTCGTTGGCTGGGCAGCTGGGGTAGCTGCCAAGCCCAC
CTGGGTTCGAGCCTTGGCTCTAACACAAGGTGCACACGGAGTTTCTCCTATAAATAAAAGCCAACGAGGGTTGT------
---------------------------ATCATCGGTCCTCGCCGTTCGTGGCATGTCGTCTCACCGGTCGCAACATCCCT
CATTGACGGTTGTATCATTTAGTCACATAGATTGCAGTGTCACTTGTCATTGACTGGAAAACTATCGCAACACTTTTCGT
CACCGATTGCACCATCTAGCCGTGCCGCTTGTAGCAAAACAACTACGCCGTTGTCACTC---------------------
--------------------------TTGATATATCAGTAGCCTATATTGCTTATAGTATGCCTAGGTGAATTCCAAAGG
ATTGCACCACTTGTCTAGCACTGCTTGTTTGTACAAGCTGTTGT-TTGTAGCGTCTTTTGTTCTTTTTATTTTCTACTCC
-TAGCCATTGGCTTCTGAGCTTTCTTGTTATTTTTTCAAC-AAAAAGAGGCTAGATTGGTTCAAAGGGCATCTATAATTG
GGCCTCATAAGTTAACTATGATTGTTTACTAATTATATTAAACAAGTAAAAATATAATAATAAAATCCA-----------
-------------------------
>SNPs
-------S---S----------------------S-----------------------------------SSSSSSS---
--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
-------S-----------------------------SS-------------------S----S----SS----------
---S------S-------S-----------S----------------S---S-----SS--SS-S---------------
------------------------S-------------------------------------------------------
------------------------------------------------------S-------------------------
-------------------------------S-----------------------SSS-SSSSSSSSSSSSSSSSSSSSS
SSSSS-----------------------------------------------------------S---------------
--------------------------------------S------------S----------------------------
------------------S-----------------------------SSSSSS-S------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
-----------S-S--S-----------S-----------------------------------------------SSSS
----------------------------------S---------------------------------------------
---------------------------------------------S----------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-----S-----------S--------------------------------------------------------------
-------------------------------------------------S---------------------S-------S
----------------------------------S---------S-----------------------------------
--------------------------------------------------------------------S-----------
---------------------------------S----------------------------------------------
-----S--------S----------------------------S------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
-----S-----------------------------------------------------------S--S-----------
---------------------------S----------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-----------S--S-----------------S-----------------------------------------------
----------------------------------------S---S--S------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-------------S-----------------------SS-SSSSS---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S------S-------
---------S----------------------------------------------------------------------
-------------S----------------------S-------------------------------------S-----
------------------------------S-------S------S--S-----------S-------------------
-------------S--------------------------S-------------S-------S-----------------
------S-----------------------------------------------------------------S-------
--------------------------------------------------------------------------------
----S------------------S--------------------------------------------------------
----------------S-------------------------------------------------------------S-
-----------------------------------------S--------------------------------------
-----------------------S----------------------------------------------S---------
---S-----S---------------
>forward_271
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TGGGATCGTACGGTCTTCCT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------
>reverse_4461
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CGATGGGGACTACACCTTCC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_345
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CTATCAACTCGGCTGGCACA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------
>reverse_4797
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TGTC
CTCGAGCTTCTCTCCG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_739
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
AGAATATAGCAGCCCGCCT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_5040
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GTGTTCAGCCTCTCGATGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_4255
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCAGT
TCATCGACAAGCCTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_5690
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TGAGACGCGACAGTCCTTTG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
