>input_sequence_41486
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----------------------------------------ACACACACACACACACATAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAAACGGGAAAAAAAAGGATAACTCCTTTTGTGTGTGAGATAAACACACACAAAAACGAAAGCATTATCATAG
GAAGAGATGGCGCTAGAAGACTACGTGCCTCGACAATGGCAGGTCCTAGCAACCACCCTCCTCCTTGCGATGCTCCTGCT
CCCTCTTCTCTCCATGT---TACTTGTAGCAGCAGCAAGGGCAAGTCCTAACAGCACCGGCACTAGGAACAAGCTCCCTC
CGCACCCACCGGGGCTGCCCATCCTCGGCAACCTGCACCAGATGGGCGCTCTGCCGCACCGGAGCCTCTGGGAGATGGCT
CAGCGGCACGGGCCTGTGATGATGCTGCGCCTGGGGACGGTGCCCATGTTGGTGGTGTCGTCAGCTGGCGCGGCACGCGA
CGTGCTCAAGACGCACGACGCCGATTGCTGCAGCCGCCCGGACACGCCAGGGACCAGGCGGTTGTCGTACCAGCACAATG
ACGTGGCCTTCAGCCCCTACAGCGAGCAGTGGCGAGAGCGCCGCAAACTCCTGGTCGTCGAGTTCCTCAGCAAGCGCCGC
ATCCAGGCCACTTGGTACGCCAGGGAGACTGAGGTGGGTAAACTGGTGAGCGGACTAGCAGTAGCTAGCATGAATGGACA
GGAACCAGTATGCCTGGAGGATCATGTCTTCGGGTACATGGACGGCATCGTCGGCACGGTGGCGTTCGGTAACATGTACG
GCACAGAGCACTTTGCGCACAAGGAGCACTTTCACCACGTGATTGACGAGGCCATGGTGGTGAGGTCTAGCTTCTCGGCC
GAGGACTACTTCCCCAACACCCTTGGCCGCCTCGTCGACCGCCTCACCGGGGTAGCCTCCCTCCGTGAAATGGTGTTCAA
GGAGTTCGACGCCTTCTTTGAGATGATGCTTGGCCAGGCCAAGCCCGACAATGCTGGCTGTGTCGGCCTCATCGACGTCC
TCATCCGCCTCATGAAGGAGCAGCAGCAAGGATCTTTCACGGTCAGCAGAGACGTCGTCAAGGGGCTACTAACGGTATGA
AACATTAGTATGATATATAAACTAAAACAAT--TACTTGCAAGGAGAGTGAGCCACCACTTTACATGCTCAATTC----G
TAATACAATATGTACTATCTAAAAATCTTAACGACTTCATCTAAAATATATTTTTTCTTGCGGGGGACTTCATCTAAAAT
ATATAATCTTGTAGAACACATTTATCGGTGCCGTGGACACCGGCGCGGTGACCATTATCTGGGCAATGGCGGAGCTGGTT
CGGAACCCACATGTGCTGAACAAGGTGCAAAACGAGATCAGAACTATGGTGG---GCAACAGAGAGAGGGTGCAGCAAGA
CGATGTGGCCAAGCTCAAGTATCTCAAGATGGTGGTCATGGAGACGTTGCGCCTGCACCCGGCATTGCCCCTTCTCGTGC
CGAGGGAAACCATGCGGCACATCACCGTCTCTGGTTACGATGTCCCGGCAAAGACGAGGATCTTGGTGAACGCATGGGCC
ATCGGGAGGGACCCGACAAACTGGGA---AAACCCCGAGGAGTTCATCCCAGAGAGATTCAAAGGCGAGGAGGATGTGAA
CTTCAACCGGGCGCAGTTTGAATTCCTGCCTTTCGGTGCCGGACGTAGGATGTGCCCTGGGATAGACATGGGGTTAGCCA
CCACAGAGTTCACCTTAGCAAACTTGCTCTACTGCTTCGACTGGGAGCTCCCGGAGGGGCTGAGGAGTGAGGACATGAGC
ATGGAAGAGGCAGGAGGACTCACCATCCATAAGAAGACGCGGCTCTTGCTGGTGCCGACAAGATACAAGTGTGGTAGCGC
TAGCTGATCAAGTTGGATGTGCATGCCAATAAA-----------------------------------------------
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------------------------------------------------------------------------------
>chr4A_1_TraesCS4A01G463600
CTAACATACTTTCCAAGTTTCTAACTTTTATTTTCTCCTACTGAGAATAAAGTTCTAGATTCATCAATGACAGATGACCG
TGATTATGTGTGCTTTTCTAAGATCGAGCCAGGGATTTCTTCTTACAAATAAAATAGGCTCAGCTATAGATCTTAATTCT
TGAAACGCCACAAACTTGTAGAACTATTAAAAAAAATTCGAATAAGCAGCAACTATACACACAACTTTTTCTAACAAAAA
CGTTCAAGGAAGATCCAAGATAAAACATGGACTAACCTGTGCAGGATGAGCTTACGGAATACGTCTTCTACGATCAATCA
GTCATCGCCGTCTCTATGCGATTCACAAAGAAGAAAAATGTAGTTCCTTTCTCGTCTGTAGCAGTGCTGCTAAAAGACAA
GATTTCTAAGAAGAGAAGCATAGGGTGGTTGATGAATGGATAGGAAGAGAGAACACACTGAACACATTCGTGATAGGTAT
AACCTTTTATACAGACTTATAACAGGAACTATTTACCGAAATATTTGAACCTTTGATAACGGATCAACATAAACAACAAT
AGTACTTTAGCTTGACGATGTGAATACAGATACATAGGTACTGATATACAAAGGAAAATACAAGAACTACAGAGAGAGAT
GAACGAATCTTGGCGTTGATGGTCCACAATCCGCGTACCACCACACATGTGTACCACAAATCCCCTTCCGCCTGTTTTCA
GTGGGCAATAGTAGAATTTGAGGGACGCATCTTGATGAATGGTCTTTGAGATAGACATTTTCGACCCATAGAAAATTGAT
CGATACCGGCAATAATCAATACAAGCGTCGACATAATATGAGCATGGTCCACTCAGTAGCAATTTACACCATGTATATAT
ATGCACGTGTTTCCAAGATGTAGGGGGGTTTTCAATAAAGAATTGTATACTACAATCCCATAAAACTCACACGGCCTGAG
CCTACATATAGGAGTATAACACACACACACACACACACACACACACACACACACACATAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAAACGGGAAAAAAAAGGATAACTCCTTTTGTGTGTGAGATAAACACACACAAAAACGAAAGCATTATCATAG
GAAGAGATGGCGCTAGAAGACTACGTGCCTCGACAATGGCAGGTCCTAGCAACCACCCTCCTCCTTGCGATGCTCCTGCT
CCCTCTTCTCTCCATGT---TACTTGTAGCAGCAGCAAGGGCAAGTCCTAACAGCACCGGCACTAGGAACAAGCTCCCTC
CGCACCCACCGGGGCTGCCCATCCTCGGCAACCTGCACCAGATGGGCGCTCTGCCGCACCGGAGCCTCTGGGAGATGGCT
CAGCGGCACGGGCCTGTGATGATGCTGCGCCTGGGGACGGTGCCCATGTTGGTGGTGTCGTCAGCTGGCGCGGCACGCGA
CGTGCTCAAGACGCACGACGCCGATTGCTGCAGCCGCCCGGACACGCCAGGGACCAGGCGGTTGTCGTACCAGCACAATG
ACGTGGCCTTCAGCCCCTACAGCGAGCAGTGGCGAGAGCGCCGCAAACTCCTGGTCGTCGAGTTCCTCAGCAAGCGCCGC
ATCCAGGCCACTTGGTACGCCAGGGAGACTGAGGTGGGTAAACTGGTGAGCGGACTAGCAGTAGCTAGCATGAATGGACA
GGAACCAGTATGCCTGGAGGATCATGTCTTCGGGTACATGGACGGCATCGTCGGCACGGTGGCGTTCGGTAACATGTACG
GCACAGAGCACTTTGCGCACAAGGAGCACTTTCACCACGTGATTGACGAGGCCATGGTGGTGAGGTCTAGCTTCTCGGCC
GAGGACTACTTCCCCAACACCCTTGGCCGCCTCGTCGACCGCCTCACCGGGGTAGCCTCCCTCCGTGAAATGGTGTTCAA
GGAGTTCGACGCCTTCTTTGAGATGATGCTTGGCCAGGCCAAGCCCGACAATGCTGGCTGTGTCGGCCTCATCGACGTCC
TCATCCGCCTCATGAAGGAGCAGCAGCAAGGATCTTTCACGGTCAGCAGAGACGTCGTCAAGGGGCTACTAACGGTATGA
AACATTAGTATGATATATAAACTAAAACAAT--TACTTGCAAGGAGAGTGAGCCACCACTTTACATGCTCAATTC----G
TAATACAATATGTACTATCTAAAAATCTTAACGACTTCATCTAAAATATATTTTTTCTTGCGGGGGACTTCATCTAAAAT
ATATAATCTTGTAGAACACATTTATCGGTGCCGTGGACACCGGCGCGGTGACCATTATCTGGGCAATGGCGGAGCTGGTT
CGGAACCCACATGTGCTGAACAAGGTGCAAAACGAGATCAGAACTATGGTGG---GCAACAGAGAGAGGGTGCAGCAAGA
CGATGTGGCCAAGCTCAAGTATCTCAAGATGGTGGTCATGGAGACGTTGCGCCTGCACCCGGCATTGCCCCTTCTCGTGC
CGAGGGAAACCATGCGGCACATCACCGTCTCTGGTTACGATGTCCCGGCAAAGACGAGGATCTTGGTGAACGCATGGGCC
ATCGGGAGGGACCCGACAAACTGGGA---AAACCCCGAGGAGTTCATCCCAGAGAGATTCAAAGGCGAGGAGGATGTGAA
CTTCAACCGGGCGCAGTTTGAATTCCTGCCTTTCGGTGCCGGACGTAGGATGTGCCCTGGGATAGACATGGGGTTAGCCA
CCACAGAGTTCACCTTAGCAAACTTGCTCTACTGCTTCGACTGGGAGCTCCCGGAGGGGCTGAGGAGTGAGGACATGAGC
ATGGAAGAGGCAGGAGGACTCACCATCCATAAGAAGACGCGGCTCTTGCTGGTGCCGACAAGATACAAGTGTGGTAGCGC
TAGCTGATCAAGTTGGATGTGCATGCCAATAAATATGCGTCACGTTATGCATACTATCAAGACGTGCTAGCGTGGGGAAG
GACTTTACCATCAATCGATCTTTTTAGGAATAATTATGTGTTCTGTATTATCTCCTTAAAATTATAGTTATTATTGTAAT
TATATAAAATTACAATTATCTCTACCAGCAAAAGGAATTACAATTATATCTGTATTCTCCTCGCACACTCAATTACTACA
TATACACCAAATTGTCCCATTGGCAAAGCTAATACATATCCTCCAAATGAACACATATAAGATCGATTGATGGTAAAGCT
TGCAGGGAGACCTCAAAGTTGTGGAAGTTAATGATAGATATGCTTATTATTTATCATGAATACGGATGTCCCCTATATAT
ATATTTTTTATTTTATTGTTTGAACAAAGAGGTGGCGCCCGAGGCGCCTACCA-TTAACTTGAAGAACATGTTACAATCA
TAGTTTTACAATGCCTGATATTCAGGTTGCCCAGCTTCAACAGCATGGGACAGTGATCAGCTAAGTGAGACTTGTTGCTA
CACACCATTATAGGGCTAATATTGGATTCTAGTGAGTAAGCTCTAGCTGCATTATTATGAGCCCTGCTATTAAGCTCCCT
GTGAATGTAACAAACGGTTATCTGCGTTTGGCTAGTAAAAGAGAAGAAGTTTGCCAACTGGTTTCTTATCTCCCAATGAC
CAGGACATGTAAGAATATCCCTTGCTTGTGCGGCCTGGGCCAGAACCTGGTTGTCCGTGAAGAAGATGATGTCTCCTGTT
GTGATTTTAGTGACCACTTGAGCAGCTGCCTGAAGTGCCATGGCTTCCGCTTGAAGAGGCGATAATGTTTGCTCCTCGGA
TACTTGTATACTAACATTGACCTCCTG----CTTTTCTTCAAGCATTTGTATGAAGATTCCTATGCCTGTAGTATATTGT
CTTTCCACTTTCCATGTTGCATCTGTGAAAACCCTGCACTTTGTGTTAGTAGCTTGCATTGTACTAGCATGATCCATC
>chr7D_1124
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---GAGATGCTGCTACAAGAGTACTTGCCTCAACAATGGCAGCTCCTCC---------TCCTCCTTGCTA------TGCT
ACCTCTCCTCTCCATTTTCATACTTGTAGGAGCAGGATGGCGAAGGGGCAGCAGCACTAGGT------ACCACCTCCCTC
CGCACCCGCCGGGGCTGCCCATCCTCGGCAACCTGCACCGGATGGGTGCTCTCCCACACCAGAGCCTCCGGGAGATGGCG
CGGCAGCACGGGCCCGTGATGATGCTGCGGCTGGGGACGGTGCCCACGTTGGTGGTGTCGTCGGCTGACGCGGCGCGGGA
CGTGCTCAAGACGCACGACGCCGACTGCTGCAGTCGCCCGGACACGCCAGGGCCCAGGCGGTTGTCATACCAGCACAATG
ACGTGGCCTTCAGCCCCTACAGTGAACAATGGCGAGAGCGGCGCAAGCTCCTGGTCGTCGAGTTCCTCAGCAAGCGCCGC
ATCCAGGCCACCTGGTATGCCAGGGAGGCTGAGGTGGGTAAACTGGTGAGCGGACTAGCAGTAGCTAGCGTTAATGGACA
GGGACCAGTATGTCTGGAGGATCACGTCTTCGGGTACATGGACGGCTTCGTCGGCACGGTGGCGTTCGGTAACATGTACG
GCACAGAGCACTTTGCGCACAAGGAGCACTTCCACCACGTGATTGACGAGGCCATGATGGTGAGGTCTAGCTTCTCCGCC
GAGGACTACTTCCCCAACGCCCTTGGCCGCCTCGTTGACCGCCTCACCGGCGTAGCCTCCCTCCGCGAGAGGGTGTTCAA
GGAGTTCGATGCCTTCTTTGAGATGATGCTTGGCCAGGCCAAGCCCGACAATGACGGCTGTGTCGGCCTCATCGACGTCC
TCATCGGCCTCATGAAGGAGAAGCACCAAGGCCCTTTCAGGGTCAGCAGAGACGTCGTCAAGGCGCTACTAACGGTATGA
AACATTAGTACGATATAAACTAATAAAAATT--TACTTGCAAGG--AGTGAGCCACAACTTTATATGCTCAATTCGATCG
TAATACAATATGTACTACCTAAAAATCTTAACGACTTCATCTAAAATATTTTTTT----GCGGGGGACTCTATCTAAAAT
ATGTAATCTTGTAGAACACATTTATCGGTGCCGTGGACACAGGCGCGGTGACCATTATTTGGGCAATGGCGGAGCTGGTT
CGGAACCCACATGTGCTGAACAAGGTGCAAAACGAGATCAGAACTATGGCGG---GCAACAAAGAGAGGGTGCAGCAAGA
CGATGTGGCCAAGCTGGAGTATCTCAAGATGGTGGTCATGGAGACATTGCGCCTGCACCCGGCGTTGCCCCTTCTTGTGC
CGAGGGAGACCATGCGGCACATCACCGTCTCTGGTTACGATGTTCCCGCAAAGACGAGGATCTTGGTGAACGCATGGGCC
ATTGGGAGGGACCCAACCAACTGGGA---AAACCCCGAGGAGTTCATCCCGGAAAGATTCGAGGGCGAGGAGGATGTGAA
CTTCAACCGGGCACAGTTTGAATTCCTACCCTTCGGTGCTGGACGTAGGATGTGCCCCGGGATAGACATGGGGTTAGCCA
CCACAGAGTTCACCCTGGCAAACTTGCTCTACTGCTTCGACTGGGAGCTCCCGGAGGGGCTGAGAAGTGAGGACATGAGC
ATGGAAGAGGCAGGAGGACTCACCATCCATAAGAAGATGCCGCTCTTGCTGGTGCCGACAAGATACAAGTGTGGTAACGC
TAGCTGATCAAG--------------------------------------------------------------------
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>chrUn_1155
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----------------------------------AATGGCAGCTTGTCCCAACAACCACCCTCCTTGCCACGCTCGTGCT
CCCCCTCCTCTCCATCTTACTACTTGTAGCAGCAGCAAGGGCAAGGCGCACCGGAGAGAACACGCACCACCGGCTCCCGC
CGCGCCCGCCGGGGCTGCCCATCCTCGGCAACCTGCACCAGATGGGTGCCCTGCCGCACCAGAGCCTCCGGGAGCTGGCG
CGGCGGCATGGGCCGGTGATGATGCTGCGGCTGGGGACGGTGCCCACCGTGGTGGTGTCGTCGGCGGACGCGGCGCGGGA
CGTGCTCAAGACGCACGACGCCGACTGCTGCAGCCGCCCGGACACGCCGGGGCCCAGGCGGCTGTCGTACCAGCACAATG
ACGTGGCCTTCAGCCCCTACAGCGAGCAGTGGCGGGCGCGGCGCAAGCTGCTGGTCGTCGAGTTCCTCAGCAAGCGCCGC
ATCCAGGCCACCTGGTACGCCAGGGAGGCCGAGATGGGCAAACTGGTGACCGGACTAGCAACGGCTAGCGTTAACGGGCG
GGAGCCGGTGTCGCTGGAGGATCACGTCTTCGGGTACATGGACGGCATCGTCGGCACGGTGGCGTTCGGTAACCAGTACG
GCACAGAGCACTTTGCGCACAAGGAGCACTTCCACCATGTGATTGACGAGGCCATGGTGGTGAGGTCTAGCTTCTCCGCC
GAGGACTACTTCCCCAACGCCCTCGGCCGCCTCGTCGACCGCCTCACCGGCGTAGCCTCACTCCGCGAGAGGGTCTTCAA
GGAGTTCGACGCCTTCTTTGAGATGATGCTCGACCAGGCCAAGCATGACAA---TGGCTGTGTCGGCCTCATCGACGTCC
TCATCGGACTCATGAAGGAGGAGCACCAAGTATCTTTCAAGGTCAGCAGAGACGTCGTCAAGGGGCTACTAACGGTATGA
AATATTAAGGCGG--TAAACTAATAAAATTCTATACTTGCAAGG--AGTGAGCCACCACTTTATATGCTCAATTC----G
TAGTACATTATATCCTGCCT-AAAAACTTGAAGACTTCATCTAAAATATA------------------------------
---TAATCTTGTAGAACACATTTATCGGCGCCGTCGACACAGGTGCGGTGACCATTATCTGGGCAATGGCGGAGCTGGTC
CGGAATCCACACGTGCTGAACAAGGTGCAAGACGAGATCCGGACTCTGGTGG---GCGATAAAGAGAAGCTGCAGCAAGA
AGATGTGACGAAGCTCAAGTACCTCAAGATGGTGGTCATGGAGACGTTGCGACTGCACCCGGCGTTGCCCCTTCTTGTGC
CGAGGGAGACCATGCGGCACATCACCGTCTCTGGCTATGATGTGCCGGTAAAGACGAGGATCTTGGTGAACGCATGGGCA
ATCGGAAGGGACCCGGCCAACTGGGA---CAACCCCGAGGAGTTCATCCCGGAGAGATTCGAGGGCGAAGAGGATGTGAA
CTTCAATCGGGCACAGTTTGAATTCCTGCCCTTCGGCGCTGGACGTAGGATGTGCCCCGGGATAGACATGGGGTTGGCCA
CCACGGAGTTCACCCTGGCAAACTTGCTCTACTACTTTGACTGGGAGTTCCCAGAGGGGCTGAGAAGTGAGGACATGAGC
ATGGAAGAGGCAGGAGGACTCACTATCCATAAGAAGACACCACTCTTGCTTGTGCCCACCAGATA---------------
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>chr1D_2240
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--------TTGTAGAACACATATATCGGAGCCGTCGACACAGGCGCGGTGACCATTATCTGGGCAATGGCAGAGCTGGTC
AGGAAGACACATGTGCTGAACAAGGTGCAAGACGAGATCAGGACTGTAGTGG---GCAACAAAGAGAGGGTGCAACAAGA
CGACATGCCCAAGCTCAAGTGCCTCAAGATGGTGGTCATGGAGACGTTGCGACTGCACCCGGTGTTGCCCCTTCTTGTGC
CGAGGGAGACCATGAGGCACATCACAGTGTGTGGGTACGACGTGCCGGCAAAGACGAGGATCTTTGTGAACGCATGGGCC
ATCGGGAGGGACCCGGCCAACTGGGGGGTCAACCCTGAGGAGTTCATCCTGGAGAGGTTCAAGGGCAAGGACGACATGTA
CTTTAACGGAGGGCAGTTCGATTTCCTGCCCTTCCACGCCGGACGCAGGATGTGTCCCGGGATAGACGTGGGGGTGGCTA
CCACGGAGTTCACCCTGGCAAACTTGCTCTATTGCTTTGACTGGGACCTCCCGGAAGGGCTGAGGAGTGAGGATATGAAC
ATGGAAGAGGCGGGAGGACTCGCCATCCATAAGAAGACACCTCTCTTGCTTGTGCCGACCAGATACAAGTG--GTAGGGC
TTGCTGATAATC-TGGATCGGTGTGCCAACAGATATGCATAATCGTTA--------------------------------
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>chr7D_2244
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------------AGAACACATTTATTGGTGCCGTCGACACGGGTGCGGTGACCATTATTTGGGCAATGGCTGAGCTGGTC
CGGAACCCACATGTGCTGAACAAGGTGCAAGGCGAGGTCAGGACCATGGTGGGCAGCAACAAAGAGAAGGTACAGCGAGA
CGATGTGGGGAAGCTCAAGTACCTCAAGATGGTGGTCATGGAGACGCTACGACTGCACCAGGTGCTGCCCCTCCTTGTGC
CGAGGGAGACTGCACGGCACATCACCGCCTCTGGCTACGACGTGCCGGAAAGGACAAGGATCTTGGTGAACGTATGGGCC
ATTGGGAGGGACCCTGCCAACTGGGA---CAACCCTGAGGAGTTCATCCCGGAGAGATTCGAGGGCAAG---GATGTGAA
CTTCAACCGGGCACAATTCGAATACCC-CCCTTCGGTGCCGGGCGTAGAATGTGCCCAGGGATCGACGTGGGGGTGGCTA
CCACGGAGTTCACGCTGGCAAACTTGCTCTACTGCTTTGACTGGGAGCTCCCGAAGGGGTTGAGC---GAGGATATGAAC
ATGGAAGAGGCTGGAGGACTCACCGACCATAAGAAGGTGCCGCTCTTGCTGGTGCCGACCAGATACAAG-----------
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>chr2B_3275
ATTTTT--------------------------------------------------------------------------
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------------------TTTTAACAAAGAGGTGGCGCCCGAGGCGCCTTTCA-TTAACTTGAAGAACATGTTACAATCA
TAGTTTTACAATGCCTGATATTCAGGTTGCCTATCTTCAACAGTATGGGACAATGATCAGCTAAGTGAGACTTGTTGCTA
CACACCATTA---GGCTAATATTGGATTCTAGAGAGTAAGCTCTAGCTGCATTATTATGAGCCCTACTATTAAGCTTCCT
GTGAATGTAACAAACGGTTATCTGAGTTTGGCTAGTAAAAGAGAAGAAGTTTGCCAACTGGTTTCTTATCTCCCAATGAC
CAGGACATGTAAGAATATCCCTTGCTTGTGCGGCATGGGCCAAAACCTGGTTGTCCGTGAAGAAGATGATGTCTCCTGTT
GTGATTTCAATGACCACTTGAGCAGCTACCTGAAGTGCCATAGCTTCCGCTTAAAGAGGCGATAAT-TTTGCTCCTCGGA
TACATGTATACTAATATTGACCTCCTGCTTGCTTTTCTTCAAGCATTTGTATGAAGATTCCTATGCTTGTAGTATTTTGT
CTTTCCACTTTCCATGTTGCATTTGTGAAAACCCTGCACTTTGTGTTAGTAGCTTGCATTGTACTAGCATGATCCATC
>chr6B_3277
TTTT-T--------------------------------------------------------------------------
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------------------TTTGAACAAAGAGATGGCGCCCCAGGCGCCTTTCA-TTAACTTGAAGAACAGGTTACAATCA
TAGTTTTACAATGCCTGATATTCAGGTTGCCCAGCTTCAACAGCATGGGACAGTGATCAGCTAAGTGAGACTTGTTGCTA
CACAACATTATAGGGCTAATATTGGATTCTAGAGAGTAAGCTCTAGCTGCATTATTATGAGCCCTGCTATTAAGCTCCCT
ATGAATGTAATAAACGGTTATCTGAGTTTGGCTAGTAAAAGAGAAGAAGTTTGCCAACTGGTTTCTTATCTCCAAATGAC
CTGGACATGTAAGAATATCCCTTGCTTGTGCGGCCTGGGCCAAAACCTGGTTGTCCGTGAAGAAGATGATGTCTCCTGTT
GTGATTTCAGTGACCACTTGAGCAGCTACCTGAAGTGCCATAGCTTCCGCTTGAAGAGGCGATAATGTTTGCTCCTCGGA
TACATGTATACTAATATTGACCTCCTG----CTTTTCTTCAAGCATTTGTATGAAGATTCCTATGCCTATAGTATTTTGT
CTTTCGACTTTCCATGCTGCATCTGTGAAAACCCTGCACTTTGTGTTAGTAGCTTGCATTGTACTAGCATGATCCA--
>chr1A_3284
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------------------TTTGGAGAAAGAGATGGCGCCTTAGGCGCCTATCCGTTAATCTGAAGAACAAGTCACA--CA
TGGTTTTACAATGTCTGATGTTCAGATTGCCTAGCTTTAAAAGCATATGACGGTGATCCATTGAGTGGGACCTGCTATTA
CAAACCATTGTAAGACTAGTACTAGAATACGAAAAGTATGCCCTAGCCACATTGTTTTGAGCCCTGCTATTAAGCTCCGT
GGGAATGTGTCTAACGGTTATCTAAGCCTTACTAGTAGAGCTAAAGAAATTTTCCAATTGGCTTCTAATCTCCAAATAAC
CAGGGCATTTAAGGATATCTCTTGCTTGTGCAACTTGGGTCAAAACCTGATTGTCCGTGAAGAAGATGATGTCTCCTGTT
GTAATTGTAGTGATCAATTGGGCAGCTACCTAAAGTGCCATAGGTTCTACTTGGAGAGGCGACGCGATTTGCTCCTCGGA
TAAACTAATATTTATGTTGATCTCTTG----ATGTTTTCCAGTCATTTCTATGAAAGTTCCTATGTGTGTGGTGTTTTGT
GTATCAAGTTTCCATGTTGCATCTGTAAAGACTTTGCAATTTGGAGTAGTAGCTTGC---------------------
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS------SS----S----S---S------S----------S----SS----S---S----------S-S----S----
------S--------S-----------------------------S-SS-S------SS----SSSSS--S---------
-------S--------------------------------------S-------------S-------S----------S
-S------------S--------------S----------------S---------------S----S------S--S--
------------------------S---------------------------S---------------------------
----------------------------------------S-----S---------------------------------
-----------S---------------S-----------------------------------------S-S--------
------------S-----------S-------------------------------------------------------
-------------------------------S--------------------------------------------S---
------------------S-------------------------------S--------------S--S-S---------
-----------------------------------------------------S--------------------------
-----S--------------S----S-------------S----------------------------------------
----------S------S-SSSSS---S-S--------------SS-----------------S----------------
-----------------S-------------------------------------SSSS----------SS---------
--S-------------------------------------S---------------------------------------
-------------------------------------------------------------S------------------
---------------------------------------------------------------S-----------S----
-------S-----------------------------------S------------------------------------
-----------------S--------------------------------S-----------S-----------------
------------------------------S--------------------------S----------------------
--------------S-S---------------------------------------------------------------
----------------------------------------S---------------------------------------
------------S-----SS-SS------S-S------S-S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS--------------------------------S-----------------------------
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--------------------------------S-----------------------------------------------
------------------------S-------------------------------------------------------
------------------------------------------S-------------------------------------
---------------------------S-------------S--------------------------------------
---S----------S------------------------------------------------------------S----
------------------------------------------------------------------------------
>forward_711
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---------------------------------------------------TACCACAAATCCCCTTCCGC---------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2382
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GAGAGAGGGTGCAGCAAGA
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_1174
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AATGGCAGGTCCTAGCAACC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2949
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------AGCGTGGGGAAG
GACTTTAC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
