>input_sequence_41398
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----------------------------------------TCTCCTCCGTCT------CGCGCCACTCCACGGCACCATG
CACTCGCCGGCGCGCTGCCCCGCCGCCACCGCCACCGCGTCCCCGCCTCTGCGCGCGCCGTTCGTCGCCATGGCCCAGCG
CGGCCGCAGGCTGCCCTCGTCCGCGCCCCCCGAGGCCGAGCAGCCGGACGAGGCGCTCGCACGCATCCTCCGCACGGAGG
CCGCCGTCTCCGGCGTCCCCCGCAAGGCCGCGGCGGGCTCCAGCCAGCACTCCACCCGCCTCTGGCCCCGCGCCGTCCTC
GAGGCCCTCGACTCCGCCGTCGCCTCCTCCCGCTGGGAGTCCGCCCTCGAGGTCCGCTCCCCCCTCAACCCCCTTTCTCT
CCG--------ATGGTCCTGCCGTTGCACGCTACCTGTTCGACTGATGCTCATCACGTGAGGATTGCTGTTTCTCAGATC
TTCGAGCTGCTGCGGAAGCAGCGGTGGTACGAGCCGAGGACGCAGACCTACGCCAGGCTGCTGATGATGCTCGGCAGGTG
CCGGCAGCCCGGCCCAGCCACCGCCCTCTTCAAGGTAATGCTCTCGGAGGAGCGGCTCGCGCCGACGGTGGACGTGTACA
CGGCTCTTGTCGGCGCCTACGGCTACAGTGGCCTGCTGGACGAGGCATTGGCCACGGTCGATCTGATGAAAGGCGCTGAC
GCAGACTGCAAGCCGGACGAGTACACCTTCTCCGTCCTCATCAACTGCTGCTGTAAGTCGCGCCGCTTCGACCTGATCCC
CACCGTCCTCGACGAGATGTCATATCTGGGGGTTGGATGCAACG-TTGTCATCCACAATGGGATAATTGATGGGTACGGC
AAGGCCGGCATGCTAGAGGAGATGGAGGATGCGCTGTCCAACATGCTTCAAGACG-----GGGACAATGTGCCGGACATA
TACACGATGAACTCCATCATATGGGCCTACGGCAACCGTGGCA--GG-GTGGATGACATGGAGAGGTGGTACGGTGAGTT
TCAGTTGATGGGCGTTGAGCCAGATACGTGGACATTCAATATCATGATGAAGTCTTACGGCAAGGCTAACATGCCTGACA
AAATGCTGTCCATCCTGAAATACATGAAGCGGCGTTTCTTCTCACCCTCTGCTGCTACGTTC------AACATAATCATA
GATTGTTTTGGAAGGGCTGGCAACATTGAGAAGATGGAGTACTATTTCAGGCTGATGAAAATTCAGGGTGTCAAACCCAA
CCCCATCACATACTGCTCGCTGGTTAATGGATACAGTAAAGCTGGGCTCCTTGATATGATTCCTGCAATTATTCGACAGA
CGGAGAACACCGATGTCGTATTAGATACTCCATTTTTCAACTGCGTTATCAGTGCATACTTCAAGTCTGGAGATACCAAA
ATAATGGAGGAAATGCTAGTGCTA--ATGAATGAAAAGAAATGTAAGCCAGACAAGGTAATTTATACCACCATGATTCAG
GCATATATTGCGCATGGGATGGATGAAGCCGCTAAGTTGTTAGAAACAGAAATGGAAAGATTTGACAAGAAATTACTGGT
AAGTGCTTTGCTATACCTTAGGGAGTTTTTTTTGTTGTTGTTATTGTTGATTTATGCCTGCATTAAGCTACCAATTATCC
AAGGTATTCACTGGTTATCTTTGTTTTTTGAATCAGGGACCAGTTCCTGAGGTTGATTACAAGTAAACTGCGGCCATCAT
TTTTTAGGGGACAGAGCAGTAAGATTTGTGTAATACGAGATTGGGGAAAGAGAGCATGTATGAGGGGGCCTTCAGAGAAT
ATGGTTATAAATCCACAGAGCTTGGCCATAATGACCATTAGTTCCATCAACACCAGACTAAGCGTTCCCAGTTCGATGCC
AATGACAGGGTAACTAGAAAGTTCAGGTTTTTCTATTAAATTGTATCTTCGGCT--------------------------
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-------------------------------------------------------------------------------
>chr4D_1_TraesCS4D01G353200
TGAAACGAATATAGTTAGTTCTTCATCCATGGATCGAACCGACACAGATGTCTCGCGAGGTTACGCCTCTTAGCGAACTA
TGACGCTGAATCCATATATTTCCCACCTGACAAACGTGTGACTTTAGAGATGGAGTTTCTTTGTTGTGATGATCCGTATA
TGCCAGTTGATAATACAATGTTAGTTATACACAAAATATGGTTAAGTGATTATGGTTTTTGTTTGCTAGTACAAGTTATG
TCGGTGGTCTGCCACGAAAAGCTTTTAGCTCCGTGGGGGCGTGGTCAGTCCAAATTACAGATTTATATAATTTGGTTTTG
CTATTTCTCAGGTACGTGAAAATTTCACTAACGCCAGTCACCTTCTTCTTCCTTCCTTCCTTTTGGCACGTCGGACCTTG
CCGGAGAAGAGAGCCTCGCTATCTATCTTAGGATGAATTCATTGCCCCATTATCAATCTTAGGGGTGGGGAGTCATGGGA
TCGCCGGAAGTGTCCCCTGGTGTGGCGGGGCATAGAGGGATGGTCGGGGCGGCGGCCAGCAACGGCGTTGGGGGAAGATG
GGGCGAGAAGGCAGTGGGCGGTAGCGTCCGCCGTCCACGGGTGGTGGAGGCCGGCGGTTTGGGCGGGGTAGGCTGGGGCT
GCGGGAGGAAGAAGAGAGGAGGGAGGTTGAAGATGAACAATGGATACGTTTTGGATCATTGGACTAAGATCAAGTGGTTG
TGACTGATGGATAAAAAAAATTCAGGTACCTGACATATAGTCGGTCCATGTAATATTGCTGGAAATTTCAGGGAAAAGTT
GAGTTTCTATCTACATAAAAATCTGGGGACCAAAATCGGGTTCCAAACGCTGGAAATTTCAGGGAAAAGTCGAGTTTCTA
TCTACATAAAAATCTGGGGACCAAAATCGGGTTCCAAACAGTTGAAGCCATCCAACGGTAATGGGATGGGACGGGAGCAG
TTTCGCTCAGTTGCTCTGCCGCCTGCCGCTCGGCACCTTATCTCCTCCGTCT------CGCGCCACTCCACGGCACCATG
CACTCGCCGGCGCGCTGCCCCGCCGCCACCGCCACCGCGTCCCCGCCTCTGCGCGCGCCGTTCGTCGCCATGGCCCAGCG
CGGCCGCAGGCTGCCCTCGTCCGCGCCCCCCGAGGCCGAGCAGCCGGACGAGGCGCTCGCACGCATCCTCCGCACGGAGG
CCGCCGTCTCCGGCGTCCCCCGCAAGGCCGCGGCGGGCTCCAGCCAGCACTCCACCCGCCTCTGGCCCCGCGCCGTCCTC
GAGGCCCTCGACTCCGCCGTCGCCTCCTCCCGCTGGGAGTCCGCCCTCGAGGTCCGCTCCCCCCTCAACCCCCTTTCTCT
CCG--------ATGGTCCTGCCGTTGCACGCTACCTGTTCGACTGATGCTCATCACGTGAGGATTGCTGTTTCTCAGATC
TTCGAGCTGCTGCGGAAGCAGCGGTGGTACGAGCCGAGGACGCAGACCTACGCCAGGCTGCTGATGATGCTCGGCAGGTG
CCGGCAGCCCGGCCCAGCCACCGCCCTCTTCAAGGTAATGCTCTCGGAGGAGCGGCTCGCGCCGACGGTGGACGTGTACA
CGGCTCTTGTCGGCGCCTACGGCTACAGTGGCCTGCTGGACGAGGCATTGGCCACGGTCGATCTGATGAAAGGCGCTGAC
GCAGACTGCAAGCCGGACGAGTACACCTTCTCCGTCCTCATCAACTGCTGCTGTAAGTCGCGCCGCTTCGACCTGATCCC
CACCGTCCTCGACGAGATGTCATATCTGGGGGTTGGATGCAACG-TTGTCATCCACAATGGGATAATTGATGGGTACGGC
AAGGCCGGCATGCTAGAGGAGATGGAGGATGCGCTGTCCAACATGCTTCAAGACG-----GGGACAATGTGCCGGACATA
TACACGATGAACTCCATCATATGGGCCTACGGCAACCGTGGCA--GG-GTGGATGACATGGAGAGGTGGTACGGTGAGTT
TCAGTTGATGGGCGTTGAGCCAGATACGTGGACATTCAATATCATGATGAAGTCTTACGGCAAGGCTAACATGCCTGACA
AAATGCTGTCCATCCTGAAATACATGAAGCGGCGTTTCTTCTCACCCTCTGCTGCTACGTTC------AACATAATCATA
GATTGTTTTGGAAGGGCTGGCAACATTGAGAAGATGGAGTACTATTTCAGGCTGATGAAAATTCAGGGTGTCAAACCCAA
CCCCATCACATACTGCTCGCTGGTTAATGGATACAGTAAAGCTGGGCTCCTTGATATGATTCCTGCAATTATTCGACAGA
CGGAGAACACCGATGTCGTATTAGATACTCCATTTTTCAACTGCGTTATCAGTGCATACTTCAAGTCTGGAGATACCAAA
ATAATGGAGGAAATGCTAGTGCTA--ATGAATGAAAAGAAATGTAAGCCAGACAAGGTAATTTATACCACCATGATTCAG
GCATATATTGCGCATGGGATGGATGAAGCCGCTAAGTTGTTAGAAACAGAAATGGAAAGATTTGACAAGAAATTACTGGT
AAGTGCTTTGCTATACCTTAGGGAGTTTTTTTTGTTGTTGTTATTGTTGATTTATGCCTGCATTAAGCTACCAATTATCC
AAGGTATTCACTGGTTATCTTTGTTTTTTGAATCAGGGACCAGTTCCTGAGGTTGATTACAAGTAAACTGCGGCCATCAT
TTTTTAGGGGACAGAGCAGTAAGATTTGTGTAATACGAGATTGGGGAAAGAGAGCATGTATGAGGGGGCCTTCAGAGAAT
ATGGTTATAAATCCACAGAGCTTGGCCATAATGACCATTAGTTCCATCAACACCAGACTAAGCGTTCCCAGTTCGATGCC
AATGACAGGGTAACTAGAAAGTTCAGGTTTTTCTATTAAATTGTATCTTCGGCTGTACCATATTTAGCTGAGCTGAAGTA
GATG-ATCTAACTTTTGTTCTTTCCATCCCAGCAATAATGAACAATGTGGAATGGAAAACCAGCTGTGGCCTGTTGTGTC
CGAAACAGGAGTCCGACACGGCCTCATTGTGCAAAGCCATTTAGACGTTCATCTGATCTGACTGAATGCACAAGTACAAA
CCCAGACAGAGCTTAACTTGGGATATCTAGAAGTGGAAGGGACTGTGGTACAGCAGATAAGGTCGGGTTCAGAGCTCCAG
CCCATTATATATCC-ATATCAGTGTGTAAATCTAGTCCCC--TTTGGTTCTGCATGAAAATTCACTACCAAAATAA-GGG
ATATAGAGAACAAATC----GAAAAGAAAGAAACAACCATTTGAATTTCCCTAGAATTTTTAGCACCACTTTC-AGAGCA
CAAAGTACACATTCTCGAAGAAGTTCAGCTT-------------------TACACATGATGC--TAATCG----ATACAG
TACAGCTTGACCTCCAAACTTCAAAC-AAAAACCCAGAGCCAGACTGC---TCATCATACTGCTGGCAGTGGCGCGACCT
TCTCTAAAATGTCCATCAT---AATCCATGGGCAGCTTGCTGTGAGGTGCTTAAATCCATCAGTCTCCTTGACAGCTCGA
AGCACCTCCTGTGAGGAAAGGTATCCGAGACAAGCATTCTTCCGTTGCGCCGCATGGTGCTGCTCCGCTAAAGCATTCTT
CAGTT---------------------------------------------------------------------------
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----------------------------GCGGCTAACACGCATCGATTTTGCACTGAACTGTTGGCCGGCAACACTGAAC
GTCACATCCATGCCTTCTCCATCCTTCAGCATGTTCATAAAGTGTGTGTGCAGGTCTGACTGTGGGACTGAGACTATGTC
TGTGCTTAAATTTTCAGTGCGAGGCTATTTCATCACGGTCAAAACGCACCTGATCGTGATGCGGTCGTCATTGAGGGGTA
GCAGTTCCTTCAGCTTGGACTTGTGAATGAACTTGTCCCAGCCACAGACCCACAGTATTTACCTACCGACTGGAAGGTA
>chr4B_768
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-----------------------------------------------ATGTAATTTTGCTGGAAATTTCAGGGAAAAGTT
GAGTTTC----TACGTAAAAATCTGGGGAGCAAAATC-------------------------------------------
-----------------------------GGTTCCAAACAGTTGAAGCCATCCAACGGTAATGGAATGGGACGGGAGCAG
TTTCGCTCAGTTGCTTTGCCGCCTGCCGCTGGGCACCTTATCTCCTCCGTCTCGCTCTCGCGCCACTCCACGGCACCATG
CACTCGCCGGCGCGCTGCCCC---GCCGCCACCACCGCGTCCTCGCCTCTGCGCGCGCCGTTCGTCGCCATGGCCCAGCG
CGGCCGCAGGCCGCCCTCGTCCGCGGCCCCCGAGGCCGAGCAGCCGGAGGAGGCGCTCGCCCGCATCCTCCGCACCGAGG
CCGCCGTCTCCGGCGTCTCCCGCAAGGCGTCCGCGGGCTCCAGCCAGCACTCCACCCGCCTCTGGCCCCGCGCCGTCCTC
CAGGCCCTCGATTCCGCCGTCGCCTCCTCCCGCTGGGAGTCCGCCCTCGAGGTCCGCTCCCTCCTCAACCCC-TCTCTCT
CTCTCTCTCGTATGGTCCAGCCGGTGCGCGCTACCTGTTCGACTGATGCTCACCACGTAAGGATTGCTGTTTCTCAGATC
TTCGAGCTGCTGCGGAAGCAGCGGTGGTACGAGCCGAGGACGCAGATCTACGCCAGGCTGCTGATGATGCTGGGCAGGTG
CCGGCAGCCCGGCCCGGCCACCGCCCTCTTCAAGGTGATGCTCTCGGAGAAGCGGCTCGCGCCGACGGTGGACGTGTACA
CGGCGCTCGTTGGCGCCTACGGCTACAGCGGCCTGCTGGACGAGGCGATGGCCACGGTCGATCGGATGAAAGGTGCTGAC
GCAGACTGCAAGCCGGACGAGTACACCTTCTCTGTCCTCATCAATTGCTGCTGTAAGTCGCGCCGCTTCGACCTGATCCC
CACCGTCCTCGACGAGATGTCATATCTGGGGGTTGGATGCAACG-TTGTCATCCACAATGGGATAATTGATGGGTACGGC
AAGGCCGGCATGCTAGAGGAGATGGAGGATGCGCTGTCCAACATGCTTCAAGATG-----GGGACAATGTGCCGGACATA
TACACGATGAACTCCATCATCTGGGCCTATGGCAACCGTGGCA--GG-GTGGATGACATGGAGAGGTGGTATGGTGAGTT
TCAGTTGATGGGCGTTGAGCCAGATACGCGGACTTTCAATATCATGATGAAGTCTTACGGCAAGGCTAACATGCCTGACA
AAATGTTGTCGGTGCTGAAATATATAAAGCGGCGCTTCTTCTCACCCTCTGCCGCTACGTTC------AACATAATCATA
GAGTGTTTTGGAAGGGCTGGCAACATTGAGAAGATGGAGTACTATTTCAGGCTGATGAAAATTAAGGGTGTCAAACCCAA
CCCCATCACGTACTGCTCGCTGGTTAATGGATACAGCAAATCTGGGCTCCTTGATAGGGTTCCTGCAATTATTCGGCAGA
CGGAGAACACTGATGTTGCCTTAGATACTCCATTTTTCAACTGTGTTATCAGTGCATACGCCAAGTCTGGCGATATCAAA
ATAATGGAGGAAATGCTACAGCTA--ATGAAGGAAAAGAAATGTAAGCCTGGCAAGGTAATTTATAGCACCATGATTCAG
GCATATATTGCCCATGGAATGGAGGAAGACGCTAAGTTATTAGAAAAAGAACTGGAAAGAGTTGACGAGAAGTTGCT-GT
AAGTGCTTTGCTATA-----------------------------------------------------------------
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>chr5A_849
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------------------------------------------------GCTGGAAATTTCAGAGAAAAGTCGAGTTTCTA
CATAAA-AAAATTCTGGGGGAAAATTG-GGGTTCCAAACAGTTGAAGCCATCCAACGGTAATGGGATGGGATGGGAGCAG
TTTCGCTCAGTTGCTTTGCCGCCTGCCGCTCGGCACCTTATCTCCTCCGTCT------CGCGCCACTCCACGGCACCATG
CACTCGCCGGCGCGCTGCGCCGCCACCACCGCCACCGCGTCCCCGCCTCTGCGCGCGCCGTTCGTCGCCATGGCCCAGCG
CGGCCGCAGGCCGCCCTCGTCCGCGCCCCCCGAGGCCGAGCAGCCGGACGAGGCGCTCGCCCGCATCCTCCGCAGGGAGG
CCGCCGTCTCCGGCGTCCCCCGCAAGGCCGCCGCGGGCACCAGCCAGCACTCCACCCGCCTCTGGCCCCGCGCCGTCCTC
GAGGCCCTCGACTCCGCCGTCGCCTCCTCCCGCTGGGAGTCCGCCCTCGAGGTCCGCTCCCCCCTCAACCCC-TTTCTCT
CCG--------ATGGTCCTGCCGCTGCACGCTACCTGTTCGACTGTTGCTCATCACGTAAGGATTGCTGTTTCTCAGATC
TTCGAGCTGCTGCGGAAGCAGCGGTGGTACGAGCCGAGGACGCAGACCTACGCCAGGCTGCTGATGATGCTCGGCAGGTG
CCGGCAGCCCGGCCCAGCCACGGCCCTCTTCAAGGTGATGCTCTCGGAGAAGCAGCTCGCGCCGACGGTGGACGTGTACA
CGGCGCTCGTTGGCGCCTACGGCTACAGCGGCCTGCTGGACGAGGCGATGGCCACGGTCGGTCTGATGAAAGGCGCTGAT
ACAGACTGCAAGCCGGACGAGTACACCTTCTCCGTCCTCATCAACTGCTGTTGTAAGTCACGCCGCTTCGACCTGATCCC
CACCGTCCTCGACGAGATGTCTTATCTGGGGATTGGATGCAACG-TTGTCATCCACAATGGGATAATTGATGGATACGGC
AAGGCCGGCATGCTAGAGGAGATGGACGATGCGCTGTCCAACATGCTTCAAGACG-----GGGACAATGTGCCGGACATA
TACACGATGAACTCCATCATCTGGGCTTATGGCAACCGTGGCA--GG-GTGGATGACATGGAGAAGTGGTACGATGAGTT
TCAGTTGATGGGCGTTGAGCCAGATACGCGGACGTTCAATATCATGATGAAGTCTTATGGCAAGGCTAACATGCCTGACA
AAATGTTGTCGATCCTGAAATACATGAAGCGGCGTTTCTTCTCACCCTCTGCTGCTACATTC------AACATAATCATA
GATTGTTTTGGAAGGGCTGGCAACATTGAGAAGATGGAGTACTATTTCAGGCTGATGAAAATTCAGGGCGTCAAACCCAA
CCCCATCACATACTGCTCCCTGGTTAATGGATACAGTAAAGCTGGGCTCCTTGATATGGTTCCTGCAATTATTCGACAGA
CGGAGAACACCGATGTCGTCTTAGATACTCCTTTTTTCAACTGTGTTATCAGTGCATACGCCAAGTCTGGAGATATCGAA
ATAATGGAGGAAATGCTAGTGCTA--ATGAAGGAAAAGAAATGTAAGCCAGACAAGGTAATTTATACCACCATGATTCAG
GCATATATGGCGCATGGGATGGATGAAGCCGCTAAGTTGTTAGAAACAGAAATGGAAAGATTTAACAACAAATTACTGGT
AAGTGCTTTGCTATACCTTAGGGAGCTTTTTTCTTTG------TTTTTGATTTATGCCTGCAATAAGCTACCAATTATCC
ATGGTATTCACTGGTTATCTTTGTTTTTTGAACCAGGGACCAGTTCCTGTGGTTGATTACAAGTAAACTGCGGCCATCGT
TTTTTAGGGGACAGAGCAGTAAGATTTGTGTGATACGAGATTGGGGAAAGAGAGCATGTATGAGAGGGCCTTCGGAGAAT
ATGGTTATAAATCCACAGAGCATGGCCATAATGACCAGTAGTTCCGTCAACACCAGACTAAGCGTTCCCAGTTCAATGCC
AATGACAGGGTAACTAGAA-GTTCAAGGTTTTCTGTTAAATTGTATCTTGAGCTGTACTATATTTAGCTGAGCTGAAGTA
GATGAATCTAACTTTTGCTCTTTCCATCCCAGCAATAATGAACAATGTGGAATGGAAAAGCAGCTGTGGCCTGTTGTGTC
CAAAACAGGAGTCCCACACGGCCTAAATGTGCAAAGCCATTTAAACGTTCATCTGATCTGACTGAGTGCACAAGTACAAC
CCCAGACAGAGG-TAACTTGGGATATCCAGAAGTGGAAGGCACTGTGGTACAGCAGATAAGGTCGGGTTCAGAGCTCCAG
CCCATTATATATCC-ATATCAGCATGTAAACCTAGTGCCC--TTTGGTTCTGCATGAAAGTTCACTGCCAAAATAA-GGG
ATATAGAGAACAAGTCA----AAAAGAAACAAACAACCATGTGAATTTACTTAAAACTTTTAGCGCTATTGTC-AGAGCA
CAAACTACACATTTTCGAAGAGAAGTTCAGTTTTGCAATGGACACGCCAGTACACATGACAA--TAATTG----ATACAG
TACAACTTGAACTCCAAACTTCAAAC-AAAAAGCCAGAGCCTGACTGC---TCAT---ACTCCTGACGGTGGCGCAACCT
TCTCTAAAATGTC---CAT---AATCCACGGGCAGCTTGCTGTGAGGTGCTTGAATCCATCAGTCTCCTTGACAGCTCGA
AGCACCTCCTGTGAAGAAAGGTATCTGAGACAAGCATTCTTGAGTTGCGCGGCGTGGTGCTGCTCCGCTAAAGCA-----
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>chr5A_1672
CTG-----------------------------------------------------------------------------
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---------AAGCCGGATGAGTACACCTTCTCCGTCCTCATCAACCGCTGTTGCAAGTCACGCCGCTTCCATCTCATCCC
CACGGCCCTCGACGAGATGTCGTACCTAGGGCTCAGATGCAATCATTGTCATCCACAATGGGATAATCGGTGCATAATGC
AAGGCCGGAATGCTAGAGGAGATGGAGGAAGCGCTGTCTAACATGCTCGGGGGTGGGA------CAATATGCCAGA----
--------------CATCATTTGGGCTTATGGCAACCGTGGCA--GGGGTGGATGACATGGACAGGTGGTACGGTGAGTT
TCAGTTGATGGGCATTGAGCCAGATACGTGGACGTTCAATACCATGATG-------------------------------
-----------------------------CGGTGTTTCTTCTCGCCCTCTGCTGCTACAGTC------AACATAATCGTA
GAATGTTTTGAAAGGGCTGGCAACATTGAGAAGATGGAGTACTATTTCAGGCTGACATAAATTCAGGGCATCAAACCCAA
CCCCATCACTTACTGCTCGCTGGTTAATGGATACAGTAAAGCTGGGCTCCTTGATACGGTTCCTGTAATTATTCGACAGA
CGTAGAACACCTATGTTGTCTTAGAAACTCCATTTTTCAACTGTCCTGTCAGTGCATGTGCCAAGTCTGGAGATATCAAA
ATAATGGAGGAAATGCTGCAGTTTATATGAAAGAAACGAAATGTAAGCCTGGCAAGGTAATTTACACCACCATGATTCAA
GCATATATTGCACATGGGATGGATGAAACCGCTAAGTTGTTGGAAAAAGAAGTGGAAAGAGTCGGCAAGAATTTGCT-GC
AAGTACTTTGCTATATTTTAGTGAGCTTC--------------TTGTTGATTTATGCCTGCATTAAACTACTGAATATCC
ATG------ACAGGTTATCTTTGTTTTTGGA-TCAGTGATCAGTTCTGAGATTGA-------------------------
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-------------------------------------------------------------------------------
>chrUn_1672
CTG-----------------------------------------------------------------------------
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---------AAGCCGGATGAGTACACCTTCTCCGTCCTCATCAACTGCTGCTGCAAGTCACGCCGCTTCCATCTCTTCCC
CACGGCCCTCGACA---------ACCTGGGGCTCAGATGCAATCATTGTCATCCACAATGGGATAATCGGTGCGTACCGC
AAGGCCGGAATGCTAGAGGAGATGGAGGAAGCGCTGTCTAACACGCTCGGGGGTGGGAGTGGGACAATATGCCAGA----
--------------CATCATTTGGGCTCATGGCAACCGTGGCAGGGGGGTGGATGACATGGACAGGTGGTACGCTGAGTT
TCAGTTGATGGGCATTGAGCCAGATACGTGGACGTTCAATACCATGATG-------------------------------
-----------------------------CGGTGTTTCTTCTCGCCCTCTGCTGCTACCGTCAACATTAACATAATCGTA
GAATGTTTTGAAAGGGCTGGCAACATTGAGAAGATGGAGTACTATTTCAGGCTGACATGAATTCAGGGCATCAAACCCAA
CCCCATCACTTACTGCTCGCTGGTTAATGGATACAGTAAAGCTGGGCTCCTTGATACGGTTCCTGTAATTATTCGACAGA
CGGAGAACACCTATGTTGTCTTAGAAACTCCATTTTTCAACTGTCCTGTCAGTGCATATGCCAAGTCTGGAGATATCAAA
ATAATGGAGGAAATGCTACAGTTTATATGAAAGAAACGAAATGTAAGCCTGGCAAGGTAATTTACACCACCATGATTCAA
GCATATATTGCACATGGGATGGATGAAACAGCTAAGTTGTTGGAAAAAGAAGTGGAAAGAGTCGACAAGAATTTGCT-GC
GAGTGC-TTGCTATATTTTAGTGAGCTTC--------------TTGTTTTTTTTTT------------------------
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-------------------------------------------------------------------------------
>chr4B_3064
ATCTGAT-------------------------------------------------------------------------
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-------------------------------------------------------------CTGATTGCACAAGTACAAA
ACCAGACAGAGG-AAACTTGGAATGTCTGAAAATGGAAGGGACTCTGGTACAGCAAATAAGGTCGGGTTCAGAAATTCAA
TCCAGTACATATCC-ATGTCAGAGCGTGTATACCTTATGTTGTTTGGTTCTACAGGAAATTTCATTACCAAAACAAAGAG
AGAAACAAAACAACTCAGCAGAAATGAAAAAAAGAACCATGTTGATTTTCTCAGAACTTTTACCTCAAATGTCAAGAGCA
CCAAGTACACATTCTCGAAGAGAATTTCAGTTCTGCAACCGACAAACCAG-ACAGATGATAAAAGAAAATCAATATAGAG
CATGACTAGGGATCCAAACTTAAAACAAAAAATCTAGAGCCAGACTGCTCATCAT---ACTCCTGACGGTGGCGCAACCT
TCTCTAAGATGTC---CATCATAATCCATGGGCAGCTTGCTATGATGTGCTTGAATCCATCAGTCTCCTTGACAGCTCGA
AGCACGTCCTGTGAAGAAAGGTATCTGAGACAAGCATTCTTGAGCTGCGCGGCGTGGTGCTGCTCCGCTAAAGCA-----
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>chr5A_3084
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---------------------------------------------------------------------------ACAAA
ACCAGGCAGATG-AAACTTCGAATAGCTGGAAGTGCAAGGGACTCTGGTACAGCAAATAAGTTCAGGTTCAGAACTTCAG
TCCAGTATCCATTTTATGTCAGAGCATGCAAACCTTCTACA-TTTGGTTCTACAGGAAAGTTCACTACCAAAACTAAGGG
AGAAAGAAAACAACGCAACAGAAATGAAAGAAATAACCATGCGAAATCTCTCAGAACTTTTAGTTCAAATGTCAAGAGCA
CAGGGTACACATTCTGGAAGACAAGTTCAGTTCTGCAACCGACACACAAG-ACACATGATAA--GAAAATCAAAATGGGA
CACTACTGCAGATCCAAACTTTAAGC-AAAAATCCAGAGCCAGACTGC---TCATG---CTCCTGACGGTGGCGCGACCT
TCTCTAAAATGTC---CATCATGATCCATGGGCAGCTTGCTGTGAGGTGCTTGAATCCATCAGTCTCTTTGACAGCTCGA
AGCACCTCCTGTGAAGAAAGGTGTCTGAGACAAGCATCCTTGAGTTGCGCGGCGTGGTGCTGCTCTGCTAAAGCAAGGGT
GGTTGCCACTGTTTGCACATCGATTTTCTGGCATAGCTTCCCTTCACACATAGCCTTCAGCTGGTCCAGTCCGTACCGAT
CTGCGGCAACCAACAAGTGCTGCAATTCCACATTCCGATCCAGATCCGAGTCGCTTGGCAGAGAATCAGTGTATATGAAG
TGCAGAAGTGCCTCGAATACAGAAGGATCCATGTCATCGATCTTGATGTGTTTCATGGCGGTCTCCTTCATCTGACCAAA
GAGCTCGGCCTTGAACACCAAGGATCGCGCGGCTAACACGCATCTATG-TGCACTGAACTGTTGGCCGCCGACACTGAAC
GTCACATCCATGCCTTCTCCGTCCTTGAGCATGTTCACAAAGTGTGTGTGCAGGTTTGACTGCGGCACTTGGACTATGAC
TGTGCTTACATCTTCAGTGCGAGGCTCTTTCATCACGGTCAAAACGCACCTGAGCGTGAAGCAGTCGTCATTGCGGGATA
GCAGTTCCTTCAGCTTGGACTTCTCAATAAACTTG--------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-------------------------
-------SSSS---S--------------S-------SSSSSSSSSSS--------------S-----------------
SS--S-S----S-------SSS--SSSS----------------------------------------------------
---------------S----------------------------------------------------------------
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-----------S------------------------------------------------S-------------------
-------------------------------S------------------------------------------------
------------------------------------------------------------------------S-------
-----------------------S----------------------------------S---------------------
--------------------------------------------------------------------------------
------------------------------------S------------S------------------------------
----S--S--S-----------------S-----------------SS--------------------------------
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--------------------S--------S--------------------------------------------------
---------------------------------S----------------------------------------------
-----S----S---------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-------------------S-----------------------S---------------SS--------------S----
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------SS---SSSSSS-------------------------------------
-S-----------------------------------------------S----------------------------S-
-------------------------------S--------------------------------S--------S------
---------------------S---------------S-------S----------------------------S-----
-------------------S-----S-S------S--------------SS-------S---------------------
-----------------S-----------------------------------------S--------------------
-S------------S---------S-S----------------S---------------------S--------------
-----------SS-------------------------------------------------------------------
----------------------S------------------------------------S--------------------
-------------S--------------------------S-------S-S-----S-------S-S-S-S---------
---------------------SSS-SSSSS------------------------------SS------S-----------
----S-----S---------------------S----------------------SSS---S---S-S------------
-------------SSS------------------------------------S---------------------------
--------------S----------S---------------SS-------S--S---------------------SSSS-
SSS-S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S--SS-------------------S-S---------
--------------------S-----S----------S-----------------S------S--S---SS-------S-
--------S--S--------------S--------------------------S-----S--S----------S---S--
----------------------S-S---S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_254
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GTTATG
TCGGTGGTCTGCCA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_1384
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TTGCACGCTACCTGTTCGAC-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_976
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GCAG
TTTCGCTCAGTTGCTC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_2785
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GGGGCCTTCAGAGAAT
ATGGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_1419
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CGACTGATGCTCATCACGTG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_3055
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GACACGGCCTCATTGTGCAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
