>input_sequence_41394
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------ATGCTCCGTATCTCACCAAAGCTGTCCCACACT
GCCGCACGCCTCAGAACACCCCGCACACCTGCCGCCGCCGCCGCCGCCGCGGAAAGATGAAAGCCATCGGAAGCGGCGGC
GAGTGGTGGTGGAACCTCCCGTCTCTCCGCCGCAAGAACGATTCGCGCCGCCGCGGCCGCCGCAACCAGGACGCTCGCGG
CCGCCGCCGCGGCCCCCCGCGGGAGCCGCTCTCGTCGTCGTC---GTCGGACTCCGTCGGCCAAAGCCGGGGCTGGCCCC
TCGACTTCCCGTTCCAGCAGGCCGTGACCGCCGCCTGCCTCACCCTCACCGGCGACACAATGGCGCAGGTCCACCGCCGC
ATCGTCGACCGCCGGAAACGCGGCCCCGAACCCGACAGCAAGGTCCTTTTTCCTGCATCTGATCCCC-CTTTTGAAAGCG
TATGAAAATGGAAGTTCTAATAATAGGATAAAACTGGGTTATGATTAAGTTGGGCAAACATTCCTGCAGCCGAAACACCT
TCAACTTCAGTCTTCAGTGTAGATCAAACTGCAAAATCCAATTCAGTAGTGTGC-TATAGTAAGAAAAAACCGTGCATCA
CCATGCCAC-AGTTAGCTAATCTCACAATGCAGTGCCATCTTGGATACTTTGACGAGTGTAAA-------CCTAACACTT
TACGATTGCACTGAATTCTCACACGCGCGGGTGTCCTCCTTTCAGGCTCTTGTACCGGATCTATTGCTCAACCATGATTG
GCTTCGTGGGCTCCGTATAGCATCTTACGGGTTTCTTCTCTATGGTCCTGGCTCATATGCATGGTATCAGTTTCTTGACA
AAAGCATGCCCAAGCAAACACTCGCGACTCTGTCCGCTAAGGTATGGTATGCACCCTCCCATGTAACCGGATGATTCGGG
GATTTCGATCTTAATACATTCTATATTTTTGTGTCTGTTGTCGTTCCAGGTCCTACTGAACCAGATTGTTCTTGGTCCAT
GTGTTATCTCTGTAATTTTTGCCTGGAATAACTTGTGGTTAGGAAAATTGTCAGAATTGCCATCTAAGTATCAGAATGAC
GCCCTTCCCACTCTTCTCGATGGTACTGTTTCTGCCTGAGCGTGTTCTTAACGTTGTGCTTGAACGAAAACAACTCATGT
TATGTTATGTCTCAC--TTTATTCTGGTATTGCAGGGTTCAAATTTTGGATTCCAGTATCGATTGTTAACTTTGGGTACA
GTCTCTTAACTTCTAGCTCTACTTTC-AATATTTAGCTAAGCATTTTTCTAATCCCACTCTAGTGTAGTATTAAATTTTC
TAGTTTAGTCAGTAGTTCACTTTATCTAAACAGCCGTTTATTATGCTAATTTTCATTGTGCATACCAGGATGATTCCTTT
GCCTGCTCGTGTTGCCTTCATGTCCTCTTGTTCCATCTTCTGGAACTTCTA-TTTGTCGACCACAATGAACAAATGAACT
TCTAGTTCTCAACTTCAGGTTAGTTCTTGCTGCCACTCAAAATCTCTGATGATTACCGTAAGCGC-GGGGAGCATTTTAA
CAAAAGATCGGCTCGTCTTATTGTTCAGATCCATTCAACTGCAGCAGAGGAGGATCTGAAGGGGCTTCTTTCCTATTATA
CATAGTATGGCGGTGGTGCCTCGGGCAATTCTGGTGGTGGTCTCTTGAGTTGACAGACATTATTGCAGATGATCCATAAG
TATGTGGATACGGTCGATGGAGAAATTACAGTTCTTTCTAAACATCTATGAGCATGTTGCTCTAGTTTGACAGTGAAAGT
GTTGTAACCTGTATCATTTGTTCAGTGACCTTGAA-CTTTTATATGACAAAGACATTAGTGCAGGCCTCTGAATACAGTT
TTGTAAGTGCCATTCTCCAGGAATCTGAATTCCGTTTTTGAAAATTAAA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr3A_1_TraesCS3A01G281800
ACGCAAAATGGATCAAGCCAAATCTGCTCACCACCGGAGCTGTTCGGCTCGTCATTGTCCTCCTCCTCTTTGAGGAGCAG
TCCGGCCATGGCACGAACCCCTTCATTTTGCTTCCGGGCGAGGGCACGTGTGTTCCTCCTCTGCTGCTACTGTATGATGC
GGGCACGTACAACTTCCTCCTCCACGGCAATGTGCGCCGCCGCATCCACTGCCTTCGCCTCCGCCATGTCGGCAGCGAGG
CGCGCCTCGACCTCCTGCGCCCTCTACTTCTTACCACGATCACACACATCCTTGTAGCACTAATAGTCCTTCACACCGGA
GATGGTCGGCAGACGGACCTCGAGCTTCCAGCTCCGGCGGATCCAAGCGCCAATTGCACCGAGGCAATAAATTCCCGTGA
GACCGAATCCGAACCCGGTTGGGCGCATACGCCCGAGTCGACGGATCAGGACTGATCAGAATCGGATCCGCTGCCTGCCA
TGCCGGAGATCGTCGGAATAGAGCTTGAGGCGGAGTGGGGTGAGTAAAGTGGCTAGGGTTTGGTCCAAGATACGGATGTG
AAGGAATATATGTGGGGTCGAGATAGGCTAGCGTAGGCCGGGTCCGACGTGACGGACGCGCCCAGGTCTTCCTATATTCA
TCCTTAATTTAGGCTGGATATGAAAGGCGCGAGTCAATCCAGGCGTATGAGGCCGGTATGTGAAGTTGTCTAGATTGGGT
TTT-TTGACGGTCAATCACCGGACGAGCCCGGCTGTAAAAAAAAAAAGTTGGTCGAGCTTCCACATGTCTAGTCGAGCAG
AACAGGTGATGCTCGACACCAGCAGGTATTGCGCTCCCAGTGCGTTGAGCTTGGACAGATAAAA-----CAGTTTGAGAC
AGCTCATCTTCCTTTGCCCTCAGAAACATCTCTCTTTGTTTACGCTGCCCCGGTCCCATTTGCAGCGACACCAGGCCAGA
GGACTCGGAGCCACAAAACCTTATTGGTGGG-GTGAATACCCTCCTCATGCTCCGTATCTCACCAAAGCTGTCCCACACT
GCCGCACGCCTCAGAACACCCCGCACACCTGCCGCCGCCGCCGCCGCCGCGGAAAGATGAAAGCCATCGGAAGCGGCGGC
GAGTGGTGGTGGAACCTCCCGTCTCTCCGCCGCAAGAACGATTCGCGCCGCCGCGGCCGCCGCAACCAGGACGCTCGCGG
CCGCCGCCGCGGCCCCCCGCGGGAGCCGCTCTCGTCGTCGTC---GTCGGACTCCGTCGGCCAAAGCCGGGGCTGGCCCC
TCGACTTCCCGTTCCAGCAGGCCGTGACCGCCGCCTGCCTCACCCTCACCGGCGACACAATGGCGCAGGTCCACCGCCGC
ATCGTCGACCGCCGGAAACGCGGCCCCGAACCCGACAGCAAGGTCCTTTTTCCTGCATCTGATCCCC-CTTTTGAAAGCG
TATGAAAATGGAAGTTCTAATAATAGGATAAAACTGGGTTATGATTAAGTTGGGCAAACATTCCTGCAGCCGAAACACCT
TCAACTTCAGTCTTCAGTGTAGATCAAACTGCAAAATCCAATTCAGTAGTGTGC-TATAGTAAGAAAAAACCGTGCATCA
CCATGCCAC-AGTTAGCTAATCTCACAATGCAGTGCCATCTTGGATACTTTGACGAGTGTAAA-------CCTAACACTT
TACGATTGCACTGAATTCTCACACGCGCGGGTGTCCTCCTTTCAGGCTCTTGTACCGGATCTATTGCTCAACCATGATTG
GCTTCGTGGGCTCCGTATAGCATCTTACGGGTTTCTTCTCTATGGTCCTGGCTCATATGCATGGTATCAGTTTCTTGACA
AAAGCATGCCCAAGCAAACACTCGCGACTCTGTCCGCTAAGGTATGGTATGCACCCTCCCATGTAACCGGATGATTCGGG
GATTTCGATCTTAATACATTCTATATTTTTGTGTCTGTTGTCGTTCCAGGTCCTACTGAACCAGATTGTTCTTGGTCCAT
GTGTTATCTCTGTAATTTTTGCCTGGAATAACTTGTGGTTAGGAAAATTGTCAGAATTGCCATCTAAGTATCAGAATGAC
GCCCTTCCCACTCTTCTCGATGGTACTGTTTCTGCCTGAGCGTGTTCTTAACGTTGTGCTTGAACGAAAACAACTCATGT
TATGTTATGTCTCAC--TTTATTCTGGTATTGCAGGGTTCAAATTTTGGATTCCAGTATCGATTGTTAACTTTGGGTACA
GTCTCTTAACTTCTAGCTCTACTTTC-AATATTTAGCTAAGCATTTTTCTAATCCCACTCTAGTGTAGTATTAAATTTTC
TAGTTTAGTCAGTAGTTCACTTTATCTAAACAGCCGTTTATTATGCTAATTTTCATTGTGCATACCAGGATGATTCCTTT
GCCTGCTCGTGTTGCCTTCATGTCCTCTTGTTCCATCTTCTGGAACTTCTA-TTTGTCGACCACAATGAACAAATGAACT
TCTAGTTCTCAACTTCAGGTTAGTTCTTGCTGCCACTCAAAATCTCTGATGATTACCGTAAGCGC-GGGGAGCATTTTAA
CAAAAGATCGGCTCGTCTTATTGTTCAGATCCATTCAACTGCAGCAGAGGAGGATCTGAAGGGGCTTCTTTCCTATTATA
CATAGTATGGCGGTGGTGCCTCGGGCAATTCTGGTGGTGGTCTCTTGAGTTGACAGACATTATTGCAGATGATCCATAAG
TATGTGGATACGGTCGATGGAGAAATTACAGTTCTTTCTAAACATCTATGAGCATGTTGCTCTAGTTTGACAGTGAAAGT
GTTGTAACCTGTATCATTTGTTCAGTGACCTTGAA-CTTTTATATGACAAAGACATTAGTGCAGGCCTCTGAATACAGTT
TTGTAAGTGCCATTCTCCAGGAATCTGAATTCCGTTTTTGAAAATTAAACTTCAATGTGTGAGTTTCTATGGACAGTCCA
AGAAAGAATAAAATGAAGATCGAAGCAGGTTCCAGCATCTTTAATAGCATTGCT-TTTTCCCTTTTCGTGGTCAATATTA
TCTTTTCCTGAAATAGTTCACTAATCACAAACTGTTCCTTAAGCAAAGATACTTGTTTCACAGTATAATA---CTCCCTC
TGTCCCAAAATTCTTGTCTTAGATTTGTCTAAATACGGATGTATCAAGTCATGTTTTAGTACTACATACATTCGTATCTA
GACAAATCTAAGACAAGAATTTTGGGACGGCAGGAGTACTGAGCTATGCTGAGTAGAAAACCATTTATTAGTGAAGCCTC
AGGTCCAGACTCTGTTGGCTTTCAAAAAGAATTACAAAGCATATTTGACAGAAAAGAATTTGCTACGCCATTTCTATCTT
CCTTTTACATGACAAACAATTTACAGATTAGAGAAAGCCTAAAAATTGACACAGCTACAGTCTACAAGGTACAGGGTGAA
TAAATTATGGATGCTAA-ATTGAACGCTTGTAAAACTACCACTTCTAGTGTTCTTTTA----------------------
----------------------TCTTGGGGATTTTGTGGAAATGCATCTTCCACACAGGATAAGCCGCGATATAGCTCGT
GACCTTCCACTTCCAGTCCTGACCCTAAACGACGAGAGCTGTGGAAAAATGATTGGATTAGCATTGACAGAAACATATAT
ATGATAAACATAAGAACAAAAACTGTAATTTAAGCAGGGTTCAAAAACTCCGGAGCTAATTTTTCATGCACATTACCAGT
GCGCAAACACCATAGCTGTGCTGTGTTCAAATACCATATCACTACACAGTTGCTAATTCACTTAAAAATCTACAGCCGTT
CCAAAC-TATTCAAAATTTGTCAAGAATGTATCAGGAAAAATCAACCTAACAAGGTAGTTCCTCTTTTTGGCACTGCGTT
AATGTTACCGTTTCCTTTTTCAAATACTTTTGGTTTCCTCATAGAAATTGTCATATTCA
>chr3D_1
ACGCAAAATGGATCAAGCCAAATCTGCTCACCACCGGAGTTGTTCGACCCGTTACTATCCTCCTCCTCTTTGGGGAGCAG
TCCGACCATGGCACGAACCCCTTCATTTTGCTTCCGGGCGAGGGCACG----------------------TGTATGATGC
GGGCACGAACGACTTCCTCCTCCAGGGCAGTGTGCGCCACCGCATCCACTCCCTTCGCCTCCGCCATGTCGGTAGCGAGG
CGCGCCTCGACCTCCCGCGCCCTCTACTTCTTACCACGGTCACACACGTCCTTGTAGCACTAATACTCCTTCGCACCGGA
GATGGTCGGTAGACGGACCTCGAGCTTCCAGCTCCGGCGGATCCGACCGCCCATTGCACCGAGGCAATAAATTCCCGTGA
GACCGAATCCGAACTCGATCGGGCGCATACGCCCGAGTCGACGGATCAGGACTGATCGGAGTCGGATCCGCTGCCTGCCA
AGCCGGAGATCGTCGGAAGAGAGCTTGAGGCGGAGTGGAGTGAGTAAAGTGGCTAGGGTTTGGGCCGGGATACAAATGTG
AAGGAATATATGTGGGGTCGAGATAGGCTAGCGTAGGCCGGGTCCGGCGTGACGGACGCGCCCAGGTCTTTCTATATTCA
TCCTAAATTTAGGCTGGATATGAGAGGTGCGAGTCAATCCAGGCATATGAGGCCGGTACGTGAAGTTGTCTAGATTGGGT
TTTTTTGACGGTCAATCACCGGACGAGCCCGGCTGTAAAAAAAAT-----------------------------------
--------------------------------------AGTTGGTCGAGCTTCCACAGGTCTAGTCGAGCAGCTTCAGAC
AGCTCATCTTCCTTTGCCCCAA-AAACATCTCTCTGTGTTTACGCTGCTCCGGTCCCATTTGCAGCGACACCAGGCCAGA
GGACTCGGAGCCACAAAACCT-ATTGGTGGGAGTGAATACCCTCCTCATGCTCCGTATCTCACCAAAGCTGTCCCACACC
GCCGCACGCCTCGGAACACCCCGCACACCCGCCGCCGCCGCCGCCGCCGCGGAAAGATGAAAGCCATCGGAAGCGGCGGC
GAGTGGTGGTGGAACCTCCCGTCTCTCCGCCGCAAGAACGAGTCGCGCCGCCGCGGCCGCCGCAACCAAGACGCTCGCGG
CCGCCGCCGCGGGCCCCCGCGGGAGCCGCTCTCGTCGTCGTC---GTCGGACTCCGTCGGCCAAAGCCGTGGCTGGCCCC
TCGAATTCCCGTTCCAGCAGGCGGTGACTGCCGCCTGCCTCACCCTCACCGGCGACACAATGGCGCAGGTCCACCGCCGC
ATCGTCGACCGCCGGAAACGCGGCCCCGAACCCGACAGCAAGGTCCTTTTTCCTGCATCTCATTTCC-CTTTGGAAACCG
TAATCAAAATGGAGGCCC--TAATAGGATAAAACTGGGTTATGATTCAGTTGTGTAAACATTCCGGCAACTGAAACACCT
TCAACTTCAGTCAT---TGTAGATCAAACTGTGAAATCCAAATCAGTAGTGTGCGTATACTAAATCATAGCCGTGCATCA
CCATGCCACAAGTTAGCTAATCTCACAATGCACTGTGATG----------------------A-------CCTGACACTT
TACGATTGTACTAAGTTCTCGCACGCGCCGGTGTCCTTCTTTCAGGCTCTTGTGCCGGATCTATTGCTCAACCACGATTG
GCTTCGTGGGCTTCGTATAGCATCTTACGGATTTCTTCTCTATGGTCCTGGCTCATATGCATGGTATCAGTTTCTCGACA
AAAGCATGCCCAAGCAAACACTCGCGACTCTGTCCGCTAAGGTATGGTATGCACCCTCCCATGTAACCGGATGATTCGGG
GATTTCGATCATGATACATTCTATATTTTA-TGTCTGTTGTCGTTCCAGGTCCTACTGAACCAGATTGTTCTTGGTCCAT
GTGTTATCTCTGTAATTTTTGCCTGGAATAACTTGTGGTTAGGAAAATTGTCAGAATTGCCATCTAAGTATCAGAATGAC
GCCCTTCCCACTCTTCTCGATGGTACTGTTTCTGCCTAAGCGTATTCTTAACATTGTGCTTGAACGAAAACAACTCATGT
TACGTTATGTCTCAC--T--ATTCTGGTATTGCAGGGTTCAAATTTTGGATTCCAGTATCGATTGTTAACTTTGGGTACA
GTCCCTTAACTTCTGGATCTACTTTTAAAAATTTAGCTCAGCATTTTTCTAATCCCAGCCTAGGGTAGTA-TAAAGTTTC
TAGTTTAGTCAGTATTTCACTTCATCTAAACAGCCGTTTATTATGCTTTATG---TTGTGCATACCAGGTTGATTCCTTT
GCCTGCTCGTGTTGCCTTCATGTCCTCTTGTTCCATCTTCTGGAACTTCTA-TTTGTCGACCACAATGAACAAATGAACT
TCTAGTTCTCAACTTCAGGTTAGTTCTTGCTGCAACTCAAAATCTCCGATGATTACTGTAAGTGCGGGGT-GCATTTTAA
CAAAAGATCGGCTCGTCTTATTGTTCAGATCCATTCAACTGCAGCAGAGGAGGATCTGAAGGGGCTTCTTTCCTATTATA
CGTAGTATGGCGGTGGTGCCTTGGGCAATTCTGGTGGTGGTCTCTTGAGTCGACAGACATGATTGCAGATGATCCATAAG
TATGTGGATACGGTCGATGGAGAAATTACAGTTTTTTCTAAACATCTATGAGCATGTTGCTCTAGTTTGACGGTGAAAGT
GTTGTAATCTGTATCATTTGTTCAGTAACCTTGA------------ACAAAGACATTAGTGCAGGCCTCTGAATACAGTT
TTGTAAGTGCCATTCTCCAGGAATCTGAATTCCGTTTTCGAAAATGAAGAT---------------------------CG
AGAAAGAATAAAATGAAGATCGAAGCAGGTTCCAGCATCTTTAATAGCAT---TGTTTTCCCTTCTCGTGGTCAATATTA
TATTTTCCTGACATGGTTCACTAATCACAAACTG----TTAAGCAAAGACACTTCTTTCACAGTATAATA---CT-----
--------------------------------------------------------------------------------
----------------------------------------GAGCTATGCCGACTAGAAAACCATTTATTAGTGAAGCCTC
TGGTACAGACTCTGTTGGCTTTCAAAAAGAATTACAAAGCATATTTGACAGAAAAGAATTCGCTACGCCATTTCTATTTT
TCTTTTACATGACAAACAATTTACAGATTAGAGAAAGCCTAAAAATTGACACAGCTACAGTCTACAAGGTACAAAGTGAA
TGAATTATGGATGCTAA-ATTAAACGCTTGTAAAACTACCACTTCTAGTGTTCTTTTA----------------------
----------------------TCTTGGGGATTTTGTGGAAATGCATCTTCCACACAGGATAAGCCGCGATATAGCTCGT
GACCTTCCACTTCCAGTCCTGACCCTAAACGACGAGAGCTGTGGAAAAATGATTGGATTAGCATTGACAGAAACATATAT
ATGATAAACATAAGAACAAAAACTGTAATTTAAGCAGGGTTCAAAAACTCTGACGCTAATTTTTCATGCACATTACCAGT
GCGCAAACACCATAGCTGTGCTGTGTTCAAATACCTTATCACTACACAGTTGCTAATTCACTTAAAAATCTACAGCCGTT
CCAAACATATTCAAAATTCCTCAAGAATGTATCATTAAAAATCAACCTAACAAGGTTGTTCCTCTTTTTGGCACTGCGTT
GATGTTACCATTTCCTTTTTCAAATTTGTTTGGTTTCCTCATAGAAATTGTTATATTCA
>chr3B_836
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------CCAGTGCGTTGAGCTTGGACAGATAAAA-----CAGTTTCGGAC
AGCTCATCTTCCTTTGCCCCCA-AAACATCTCTCTCTGTTTACGCTGCCCCGGTCCCATTTGCAGCGACACCAGGCCAGA
GGACTCGGAGCCACAAAACCT-ATTGGTGGG-GTGAATACCCTCCTCATGCTCCGTATCTCACCAAAGCTGTCCCACACT
GCCGCACGCCTCAGAACACCCCACACACCCGC---------CGCCGCCGCGGAAAGATGAAAGCCATCGGAAGCGGCGGC
GAGTGGTGGTGGAACCTCCCGTCCCTCCGCCGCAAGAACGACTCGCGCCGCCGCGGCCGCCGCAACCAAGACGCTCGCGG
CCGCCGCCGCGGGCCCCCGCGGGAGCCGCTCTCGTCGTCGTCGTCGTCGGACTCCGTCGGCCAAAGCCGTGGCTGGCCCC
TCGACTTCCCGTTCCAGCAGGCCGTGACCGCCGCCTGCCTCACCCTCACCGGCGACACAATGGCGCAGGTCCACCGCCGC
ATCGTCGACCGCCGGAAACGCGGCCCCGAACCCGACAGCAAGGTCATTTTTCCTGCATCTCATCTCCACTTTTGAAACCG
TTATAAAAATGGAGTCCC--TAATAGGATAAAACTGGATTATGATTCAGTTGTGTAAGCATTCCTGCAGCCGAAACACCT
TCAACTTCAGTCTTCAGTGTAGATCAAACTGTGAAGTCCAAATCAGTAGTGTGCGTATACTAAATCATAGCCGTGCATCA
CCATGCCACAAGTTAGCTAATCTCACAATGCACTGTGATG----------------------AGTGTAAACCTGACACTT
TACGATTGTACTAAGTTCTCGCACGCGCCGGTGT-CTTCTTTCAGGCTCTTGTGCCGGATCTGTTGCTCAACCACGATTG
GCTTCGTGGGCTTCGTATAGCATCTTACGGATTTCTTCTCTATGGTCCTGGCTCATATGCATGGTATCAGTTTCTCGACA
AAAGCATGCCCAAGCAAACACTCGCGACTCTGTCCGCTAAGGTATGGTATGCACCCTCCCATGTAACCGGATGATTCGGG
GATTTCGATCTTAATACATTCTGTATTTTA-TGTCTGTTGTCGTTCCAGGTCCTACTGAACCAGATTGTTCTTGGTCCAT
GTGTCATCTCTGTAATTTTTGCCTGGAATAACTTGTGGTTAGGAAAATTGTCAGAATTGCCATCGAAGTATCAGAATGAC
GCCCTTCCCACTCTTCTCGATGGTAATGTTTCTGCCTGAGTGTATTCTCAACATTGTGCTTGAACGAAAACAACTCATTT
TATGTTATGTCTCACTTT--ATTCTGCTACTGCAGGGTTTAAATTTTGGATTCCAGTATCGATTGTTAACTTTGGGTACA
GTCTCTTAACTTCTACCTCTACTTTTAAATATTTAGCTCAGCATTTTTCTAATCCTAGTCTAAGGTAGTATTAAGTTGTC
TAGTTTAGACAATACTTCATG-----TAAACAATCATTTCTTATGCTAATTTTCAATATGCATTCCAGGGTGATTCCTTT
GCCAGCTCGTGTTGCCTTCATGTCCTCTTGTTCCATCTTTTGGAACTTCTA-TTTGTCGACCACAATGAACAAATGAACT
TCTAGTTCTCATCTTCAGGTTAGTTCTTGCTGCAACTCAAAATCTCCGATGATTACTCTATGCGT-GGGT-ACATTTTAA
CAAAAGATCGGC-CGTCTTATTGTTCAGATCCATTCAACTGCAACAGAGGAGGATCTGAAGGGGCTTCTTTCCTATTATA
CGTAGTACGGCGATGGTGCCTTTGGCAGTTCTGGTGGTGGTCTCTTGAGTTGACAGACATTATTGCAGATGATCCATAAG
TATGTGGATACTGTCGATGGAGAAATTACAGTTTTGTGTAAACATCTATGAGCATGTTGCTCTAGTTTGACAGTGGAAGT
GTTGTAATTTGTATCGTTTGTTCAGTGACCTT-AA-CTTTTATATGACAAAGACATTAGTGCAGGCCTCTGAATACAGTT
TTGTAAGTGCAATTCTCCAGGAATCTGAATTCCATTTTTGAAAATTGAACTTCAATGTGCGAATTTCTAGGAACAGTCCA
AGGAAGAATAAAATGAAGATCGAAGCAGGTTCCAGAAG---TACTAGCAT---TGTTTCCCCTTTTTGTGGTTAATATTA
TCTTTCCCTGACATGGTTCAC-AATCACAAACTGTTCCTTAAGCAAAGACACTTGTTTCACAGTATAATAGTACT-----
--------------------------------------------------------------------------------
----------------------------------------GAGCTATGCCGACTAGAAAACCATTTATTAGTGAAGCCTC
TGGTACAGACTCCGTTGGCTTTTAAAAAGAATTACACAGCATATTTGACAGAAAAGAATTTGCTACGCCATTTCTATCTT
CCTTTTACATGACAAACAATTTACAGATTAGAGAAAGCCTAAAAATTGACACAGCTACAGTCTACAAGGTACAGAGTGAA
TAAATTATGGATGTTAAAATTAAACGCTTGTAAAACTACCACTTCTAGTGTTCTTTTATCTTGGGGATTTTGTGGAAAAC
TACCACTTCTAGTGTTCTTTTATCTTGGGGATTTTGTGGAAATGCATCTTCCACACAGGATAAGCCGAGATATAGCTCGT
GACCTTCCACTTCCAGTCCTGAACCTAAACGACGAGAGCTGTGGAAAA-TGATTGGATTAGCATTGACAGAAACATATAT
ATGATAAACATAAGAACAAAAACTGTAATTTAAGCAGGGTTCAAAAACTCTGACGCTAATATTTCATGCACACTACCAGT
GCGCAAACACCATAGCTGTGCTGTGTTCAAGTACCGTATCACTATACAGTTGCTAATTCACTTAAAA-TCTACAGTCATT
CCAAACATATTCAAAATTTCTCAACGATGTATCAGGAAAAATCAACCTAACAAGGTAGTTCCTCTTTTTGGCACTGCGTT
GATGTTACCATTTCCTTTTTCAAATTTGTTTGGCTTCCTCATAGAAATTATTATATTCA
>chr6A_2367
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---------------------------------------------------------------------ATGATTCCTTT
GCCTGCTCGTGTTGCCTTCATGTCCTCTTGTTCCATCTTCTGGAACTTCTATTTTGTCGACCACAATGAACAAATGAACT
TCTAGTTCTCAACTTCAGGCCAGTTCTTGCTGCAACTCAAAATCTCCGATGATTACTCTAAGCGC-GGGT-GCATTCTAA
CAAAAGACCGGCTCGTCTTATTGTTCAGATCCATTCAACTGCAGCAGAGGAGGATCTGGAGGGGCTTCTTTCCTATTATA
CGTAGTATGGCGGTGGTGCCTTGGGCAATTCTGGTGGTGATCTCTTGAGTCGACAGACATTATCGCAGATGATCCATAAG
TATGTGGATACGGTCGATGGAGAAATTACAGTTTTGTCTAAACATCTATGAGCATGTTGCTCTAATTTGACAATGAAAGT
GTTGTAATCTGTATCATTTATTCAGTGACCTT-AAACTTTTATATGACAAAGACGTTAGTGCAGGCATCTGAATACAATT
TTGTAAGTGCCATTCTCCAGGAATCTGAATTCCATTTTTTAAAATTAAACTTTAATGTGCGAGTTTCTATGGACAGTCCG
AGAAAGAATAAAATGAAGATCAAAGCAGGTTCCAGCATCTTTAATAGCAT---T-TTTTCCCTTTTCGTGGTCAATATTA
TCTTTTCCTAACATGGTTCACTAATCACAAACTGTTCCTTAAGCAAAGACACTTGTTTCACAGTATAATA---CT-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>SNPs
---------------------------------------S------S-S---S-S-S---------------S-------
----S-------------------------------------------SSSSSSSSSSSSSSSSSSSSSS----------
-------S--S-------------S----S--------S-----------S---------------------S-------
---------------S----------------------S--------S-----------------S------S-------
---------S----------------------------------S-S----S----------------------------
--------------S--S-S-------------------------------------S--S-------------------
S-----------------S-------------------S------------------------S--SS-----SS-----
----------------------------------------------S-----------------------S---------
----S------------------S---S----------------S-------------S---------------------
--------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------S----
-------------------S--S------------S--------------------------------------------
---------------------S----------------------------------------------------------
-----------------------------S--------------------------------------------------
-----------------------------------------S--------------------------S-----------
------------S--------------------------------------------------------S----------
--------------------------------------------------------------------------------
------------------------------------------------------------S---S------------S--
--SS----SS-S---S-SSS--------------------------S-----S-S-------------------------
-------------------------------SS--------S-----------------S---SSS-S-S----------
--------------------------------S--SS--SSSSSSSSSSSSSSSSSSSSSSS-----------S------
--------S---S-S-----S-------S--------S---------------S--------------------S-----
------------S-----------------S--------------------------------------------S----
--------------------------------------------------------------------------------
-----------------------------SS-------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------S---------------------------
------------------SS------------------------------------------------------------
-------------------------S------------S------------------S-----S----------------
--------------S-------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S------------S---------S------------SS---------
--------------------------------------------------------------------------------
-S-------------------S----------------------------------------------------------
---------------------------------S----------------------------------------------
-------S------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------SSS---------------------------
-----------S--S----------------------------------S-------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S--S---------------------------
S---S---------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-SS--------------------------
-----------------------------------S--------------------------------------------
-------------------S------------------------------------------------------------
S--------S---------------SSS-----------------------S-------
>forward_789
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TGGTCGAGCTTCCACATGTC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>reverse_1836
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------TGACA
AAAGCATGCCCAAGC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>forward_982
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ACTCGGAGCCACAAAACCTT----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_1951
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------GTGTCTGTTGTCGTTCCAGG------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_1773
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ATGATTG
GCTTCGTGGGCTC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_3227
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------ACGGCAGGAGTACTGAGCTA----------------------------------
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