>input_sequence_41370
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--------------------------------------------ATGGACTACTCAAATTTGCGTCGCCAAATTACCTTC
ATGAAGAAAAGTTTCTTTGATCAGGTTTATTGGCTCCCCCTTTGTTCATTTGAAATCTGGGTTTATAATCAATTACTGTG
TTGCACATGTTAAGCTCTTCTCCCAAGAGCTGCAAGTTTTGACTGGATAACTTGTAAGCCGAATTACTCTCGTAGTGATT
TTCTTCTGATAGAATGATGACCTTTGGACATCTCCACATGACATATCCACTGAGGCTCTGAAAACTTTGATCTACTGCAT
TTTTTTCTTTCAAATATATGGAGTTCCTCTCTGGTGGCGGGACTCAATGGATCCTTCACTCATTCTGTTTCAAAATTTTA
CTTCATTGCAACTGCATAACTCATTCACTTTGTAATCTGGTCTAATGGGACAATATGGGGGCAAATGCCAACTTGGATAT
TATTTTCCCACACAATAGTTATGGCACTTTCTTTTTTTCCACAAACGCATCGCCTGCTGAATGCATCATGATGTTTAAAA
TTAGATATATGGGCAAGGATGTAATAGACCATAAGAATAGAAAATCACTCTCTTTATTTCCTTCGTTCTATTCCTTTGAG
AATATACAAAAGGTTGGGGTGTTCAAACTTTACAGAGTAATCATAGAGGTAGGATCATTTTGATGATACATTAGTATCTT
CTAGGCAAATATTAGGGTGCCCTTTATACCTAAGCCAGGTTGACACCTAAAACCACCTTGATATAGCTGACTCAGTTTGA
TATTTGACAAATATTAAGGTGCTTGTTATACTTAGCTAGGTTGAAGCCTATAACAACTTGCTGGGACTTTGTTTGATATT
TGACTAATTATTTTGATTTACCCATGTAATCGAGAATCTTTTTTTCTGCCGTGGACCACACAAATGGTATTTTATTATAT
GTTGTATTTCAGGCTTCTTTGATTTGCCTAATAATCTACTTTGGGCTATTCCTGCAGGGTTACCTTGATGAACAGTTCAA
TCAGCTGGAAGAACTGCAGGACGAATCAAGCCCCAATTTCGTTGAGGAAGTTGTGGCTTTGTTTCTGAAAGATTCGCCGA
GATTGTTGTCAAACATAGAACAAACAATGTAAGCAATACGTCTGTAAGTCAGGCCATAACTGTC------TTTTTTTTGG
CTGAAACAGTCCATACAAATGGTTTCAAGACATATCATATCTACCAAAAATGGAATCATATTTAGTGCATTCACTTTCCA
GTTCCTTTTGATGCAGTGGGAAGTACCCTCAGGATTTCTACCGGTTAGATTCTCTTGTGCACCAGCTCAAAGGCAGCGGA
TCCAGGTACAGGACCTGTGAATATGCTCAGAAAACACCCGGTGTGAATAATCTTATTGCGGGTCTCATCACCACAGAATC
ACCCATTCAGTATATACATGATTTAAGGGTGCTTAGTGAAGTGAGAGAACGAATATTATTAGCAAATGGAAATGCTATCA
CCGACAACTTTACCTTTTGCCTGCCTTATGTGTTCTGATTCACTGAAGTTGACTTGTGTTTGGCGCAGCATTGGAGCAGT
GAGGATGAAGAACGAGTGCTCGGTGTTTAAGGCACACTGCAATGACAGGAATCTGGAAGGGTATTGCATCACTCGTGCTT
TGTTTTCATCTCTTGTCGCCAGGCGATTTGCTCATCT----------AGTGTGTCCATGGTTGTGCTTCAGATGCCGCAG
GTCACTGCAGAAGATGAAGAGGGAGCATGCCACTCTGAAGCAGAAGCTGGAGTCATATTTTCAGGTACATTAGACACCTT
TCCCTTGAAAATCTTTCATGGTTAAACAACATTTTACTTATCTTGTATTTAATGCATGCCAATGATGATACAGTTACTGC
GGCAAGTCGGGCCTCGCGAGCATGCCGTGAACTCAAGGAAGTAA------------------------------------
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>chr1B_1_TraesCS1B01G141500
TGGGAAGTTCCTGTTTCTATTCTACCTGTACCAATCAATCCA---ATCAATAGCATTCGAGTGTCGTAGCTCTAAGCTCA
TTGATGCTGACAAATTTCGATGCTTCAAGAAAATTCAGCTGTAGTAGGAAATACGTTTTTTCAGGATACAGAA-CTATGC
CCTGGAGATTCATTCTGTGTAACATAGTAAACAGCTTCAATCTTCAACACAGTGTAACGTTTTAGTTTGTCAAGAACCAA
TCTTTAGAAGGTTTGCACAGAGTTTAGTACTCCCAGCTATTTGTTATGTAAGAATAAATGTCCTTTCTGTTTCTTATTCA
CAGGGAGTTTTAGCTGTTGATGTCATTTTATAGTCACTTAAATTCCTCCAAAACTCTTTAGTAGTAAATATCTTGTAAAG
GTAGAATTTTTTGATTTAGTGAATATATTCTCCTTACATTAAACGCTCATCGTTCCCTCATTAACTTTTAATTTAGCCAA
ATTGCTGGATCCCTGCTCTCTGACAAATATCTTGTAAAGGTATTTCGTAAATTTCAGTGGCAGATGTGGTTTCTTTATTT
GTAAAAGGTTAACAGTGTAATCGGATATTTATAATTGTATCCTATCTAGAAATGTTTATTTATCTTATTTCTAGGTTTGC
TTATTTGGGAACATGTTCTAGGGCACTTTACTTCTGCGCATTTCTGCGGTGCAGCGTCATCATATTCTGAAATCCTTTTC
CTGTCTAGGGTGTAAACCACACAAGCCACATGAAAGAGAACTCATAGATCAACTTGCAGAATTTGTAGTTGGGTTTTTAT
TTCAGCAGTTTCATGAAAAAGAAAAGTACTTTGTCTTTTTGTTATGCTTTATTCACAGGAGGGCATTATCAATTAGAATA
AAGATTTTGCATGCATAAATAAAATTCTGTTTCCCTCTATATATACGGCCTCCTTCGGTTTGCATGTCTCATTGCAGCCA
TCTCAGTTCTCTCTGTGTGCTTGTACTGACATATAAGGCCAACTATGGACTACTCAAATTTGCGTCGCCAAATTACCTTC
ATGAAGAAAAGTTTCTTTGATCAGGTTTATTGGCTCCCCCTTTGTTCATTTGAAATCTGGGTTTATAATCAATTACTGTG
TTGCACATGTTAAGCTCTTCTCCCAAGAGCTGCAAGTTTTGACTGGATAACTTGTAAGCCGAATTACTCTCGTAGTGATT
TTCTTCTGATAGAATGATGACCTTTGGACATCTCCACATGACATATCCACTGAGGCTCTGAAAACTTTGATCTACTGCAT
TTTTTTCTTTCAAATATATGGAGTTCCTCTCTGGTGGCGGGACTCAATGGATCCTTCACTCATTCTGTTTCAAAATTTTA
CTTCATTGCAACTGCATAACTCATTCACTTTGTAATCTGGTCTAATGGGACAATATGGGGGCAAATGCCAACTTGGATAT
TATTTTCCCACACAATAGTTATGGCACTTTCTTTTTTTCCACAAACGCATCGCCTGCTGAATGCATCATGATGTTTAAAA
TTAGATATATGGGCAAGGATGTAATAGACCATAAGAATAGAAAATCACTCTCTTTATTTCCTTCGTTCTATTCCTTTGAG
AATATACAAAAGGTTGGGGTGTTCAAACTTTACAGAGTAATCATAGAGGTAGGATCATTTTGATGATACATTAGTATCTT
CTAGGCAAATATTAGGGTGCCCTTTATACCTAAGCCAGGTTGACACCTAAAACCACCTTGATATAGCTGACTCAGTTTGA
TATTTGACAAATATTAAGGTGCTTGTTATACTTAGCTAGGTTGAAGCCTATAACAACTTGCTGGGACTTTGTTTGATATT
TGACTAATTATTTTGATTTACCCATGTAATCGAGAATCTTTTTTTCTGCCGTGGACCACACAAATGGTATTTTATTATAT
GTTGTATTTCAGGCTTCTTTGATTTGCCTAATAATCTACTTTGGGCTATTCCTGCAGGGTTACCTTGATGAACAGTTCAA
TCAGCTGGAAGAACTGCAGGACGAATCAAGCCCCAATTTCGTTGAGGAAGTTGTGGCTTTGTTTCTGAAAGATTCGCCGA
GATTGTTGTCAAACATAGAACAAACAATGTAAGCAATACGTCTGTAAGTCAGGCCATAACTGTC------TTTTTTTTGG
CTGAAACAGTCCATACAAATGGTTTCAAGACATATCATATCTACCAAAAATGGAATCATATTTAGTGCATTCACTTTCCA
GTTCCTTTTGATGCAGTGGGAAGTACCCTCAGGATTTCTACCGGTTAGATTCTCTTGTGCACCAGCTCAAAGGCAGCGGA
TCCAGGTACAGGACCTGTGAATATGCTCAGAAAACACCCGGTGTGAATAATCTTATTGCGGGTCTCATCACCACAGAATC
ACCCATTCAGTATATACATGATTTAAGGGTGCTTAGTGAAGTGAGAGAACGAATATTATTAGCAAATGGAAATGCTATCA
CCGACAACTTTACCTTTTGCCTGCCTTATGTGTTCTGATTCACTGAAGTTGACTTGTGTTTGGCGCAGCATTGGAGCAGT
GAGGATGAAGAACGAGTGCTCGGTGTTTAAGGCACACTGCAATGACAGGAATCTGGAAGGGTATTGCATCACTCGTGCTT
TGTTTTCATCTCTTGTCGCCAGGCGATTTGCTCATCT----------AGTGTGTCCATGGTTGTGCTTCAGATGCCGCAG
GTCACTGCAGAAGATGAAGAGGGAGCATGCCACTCTGAAGCAGAAGCTGGAGTCATATTTTCAGGTACATTAGACACCTT
TCCCTTGAAAATCTTTCATGGTTAAACAACATTTTACTTATCTTGTATTTAATGCATGCCAATGATGATACAGTTACTGC
GGCAAGTCGGGCCTCGCGAGCATGCCGTGAACTCAAGGAAGTAAGAAGATAGCATATGGAATGCAGTTCAAAGGGAACTA
AGGGACCAGCTACCTCTCTCCCTTGGGAGCTTTTATCATCCATAATTTTTGCTTGCTTTTAACCTGGGCCCTTTTGTCGT
TCATGGGTGGCCTAGTTCTTTGTTGTGTGAAGCTTGCTCATGCATACACAGCCCCTGCCTTGCTATGGGGAATGACATGA
TGTAATCTAACTCCTTTCTTTCACGAATACGCAAAGCTTGCTTTTGCGAATCACGTGTTGTACCACCCCTATGTAATCTA
ACTCCGCGTAGCTGTGCCCCGAATATAATGATACTAGTAAAATGCCCGTACGTTGCTACGGGCTACAATGCATATACATT
AACCAAACAAATAAT----TAATGT--TCTCCAAGGTTGACGCTTATTTCTCCTTCATACGCCAAGACATGTTCGGACAT
CAAACGAGCGTCCGTTGGGCTCTTGAAAATCCAACCGTCTAAACAGTTTGGCTAGCCCCAAATCCAACACATATGTGGGG
AGAAATGTAGTTCTCTGGACTACCCAACATGTTATATCCAACACACGGCCCCG-CCCCCCGATG-CACCC-TCCTATTTT
GTCCTCTCTTTAAAACCGGATGACGCCCACCTCACCTTCGCCTTGTCGCCCTCTCCCCTTCACACCGGACTTCCCCACGG
ACCACCAAGGAGGAGTCCCCCGTCAACTGCCTTGA-----TCCCCCCCCT-TGTTCGTGTCGATCCACCACCACCATCAA
GGTGGTCGAGGCATGCGCCTCCCATGACGCCCCT-AAGCTAAGAACGCGGATCCAATGTCTCTTGAGCCATTGTCACGTT
GTAACATATATAGTTGAACGATGTGCATTACCACGAAACAACAATATGATGTTCATTGTTGGGCATGCAATTGATACACC
ACTGTGTTAATTATTAACTCTTCAAGCAACCAACCAATGCATTTACCCTTCTATATTAACCCAAAAATTGTACAACTTGA
CAAAAAAAAA---T----GAATCGCTC
>chr1A_1
TGGGAAGTTCCTGTTTCTATTCTACCTGTACCAATCAATCCAATCATCCATAGCATTCGAGAGTCGTAGCTCTAAGCTCA
TTGACGCTGACAAATTTCTATGCTTCAAGAAAATTCAGCTGTAGTAGGAAATACGTTTTTTCAGGATACAGAAACTACGC
CCTGGAGATTCATTCTGTGTAACATAGTAAACAGCTTCAATCTTCAACACAGTGTAACGTTTTAGTTTGTCAAGAACCAA
TCTTTAGAAGGTTTGCACAGAGTTTAGTACTCCCAGCTATTTGTTATGTAAGAATAAATGTCCTTTCTGTTTCTTATTCG
CAGGGAATTTTAGCTGTTGATGTCATTTTATAGTCACTTAAATTCCTTCAATATTCTTTAGTAGTAAATATCTTGTAAAG
GTAGAATTTTTTTATTTAGTGAATATGTTCTCCTTGCATTAAACGTTCATCGTTCCCTCATTAACTTTTAATTTAGCCAA
ATTGCCGGATCCCTGCTCTCTGACAAATATCTTGTAAAGGTATTTCGTAAATTTCAGTGGCAGACGTGGTTTCTTTATTT
GTAAAAGATTAACAGTGTAATTGGATATTTATAATTGTATCCTATCTAGAAATGTTTATTTATCTTATTTCTAGGTTTGC
TTATTTGGGAACATGTTCTAGGGCACTTTACTTCTGCGCATTTCTGCGGTGCAGCGTCATCATATTCTGAAATCCTTTTC
CTGTCTAGGGTGTAAACCACACAAGCCACATGAAAGAGAACTCATAGATCAACTTGCAGAATTTGTAGTTGGGTTTTTAT
TTGAGCAGTTTCATGAAAAAGAAAAGTACTTTGTCTTTTTGTTATGCTTTATTCACAGGA---CATTATCAATTAGAATA
AAGATTTTGCATGCATAAATAAAATTCTGTTTCCCTCTATATATACGGCCTCCTTCGGTTTGCATGTCTCATTGCAGCCA
TCTCAGTTCTCTCTGTGTGCTTGTACTGACATATAAGGCCAACTATGGACTACTCAAATTTGCGTCGCCAAATTACCTTC
ATGAAGAAAAGTTTCTTTGATCAGGTTTATTTGCTCCCCCTTTGTTCATTTGAAATCTGGGTTTATAATCAATTACAGTG
TTGCACATGTTAAGCTCTTCTCCCAAGAGCTGCAAGTTTTGACTGGATAACTTGTAAGCCGAATTACTCTTGTGGTGATT
TTCTTCTGATAGAATGATGACCTTTGGACATCTCCACATGACATATCCACTGAGGCTCTGAAAACTTTGATCTACTGCAT
TTTTTTCTTTCAAATATATGGAGTTTCTCTCTGGTGGTGGGACTCAATGGATTCTTCACTCATTCTGTTTCAAAATTTTA
CTTCATTGCAACTGCATAACTCATTCACTTTGTAATCTGGTCTAATGGGACAATATGGGGGCAAATGCCAACTTGGATAC
TATTTTCCCACACAATAGTTATGGCACTCTTTTTTTTTCCACAAACGCATCGCCTGCTGAATGCATCATGATGTTTAAAA
TTAGATATATGGGCAAGGATGTAATAGACCATACGAATAGAAAATCACTCTCTTTATTTCCTTCGTTCTATTCCTTTGAG
AATATACAAAAGGTTGGGGTGTTCAAACTTTACAGAGTAATCATAGAGGTAGGATCATTTTGATGATACATTAGTATCTT
CTAGGCAAATATTAGGGTGCCCTTTATACCTAAGCCAGGTTGACACCTAAAACCACCTTGATGTAGCTGACTCAGTTTGA
TTTTTGACAAATATTAAGGTGTTTGTTATACTTAGCTAGGTTGAAGCCTATAACAACTTGCTGGGACTTTGTTTGATATT
TGACTAATTATTTTGATTCACCCATGTAATCGAGAATCTTTTTTTCTGCCATGGACCACACAAATGGTATTTTATTATAT
GTTGTATTTCAGGCTTCTATGATTTGCCTAATAATCTACTTTGGGCTATTCCTGCAGGGTTACCTTGATGAACAGTTCAA
TCAGCTGGAAGAACTGCAGGACGAATCAAGCCCCAATTTCGTTGAGGAAGTTGTGGCTTTGTTTCTGAAAGATTCGCCGA
GATTGTTGTCAAACATAGAACAAACAATGTAAGCAATACGTCTGTAAGTCAGGCCATAACTGTCGGTTTTTTTTTTTTGG
-TGGAACAGTCCATACAAATGGTTTCAAGACATATCATATCTGCCAAAAATGGAATCATATTTAGTGCATTCACTTTCCA
GTTCCTTTTGATGCAGTGGGAAGTACCCTCAGGATTTCTACCGGTTAGATTCTCTTGTGCACCAGCTCAAAGGCAGCGGA
TCCAGGTACAGGACCTGTGAATATGCTCAGAAAACACCCGGTGTGAATAATCTTATTGCGGGTCTCATCACCACAGAATC
ACCCATTCAGTATATACATGATTTAAGAGTGCTTAGT---GTGAGAGAACGAATATTATTAGCAAATGGAAAGGCTATCA
CCGACAACTTTACCTTTTGCCTGCCTTATGTGTTCTAATTCACTGAAGATGACTTGTGTTTGGCGCAGCATTGGAGCAGT
GAGGATGAAGAACGAGTGCTCGGTGTTTAAGGCACACTGCAATGACAGGAATCTGGAAGGGTATTGCATCACTCGTGCTT
TGTTTTCATCTCTTGTCGCCAGGTGATTTGCTCATCTCACCTGTTGTAGTGTGTCCATGGTTGTGCTTCAGATGCCGCAG
GTCACTGCAGAAGATGAAGAGGGAGCATGCCACTCTGAAGCAGAAGCTGGAGTCATATTTTCAGGTACATTAGACACCTT
TCCCTTGAAAATCTTTCGTGGTTAAACAACATTTTACTTATCTTGTATTTAATGCATGCCAATGATGATACAGTTACTGC
GGCAAGTCGGGCCTCGCGAGCATGCCGTGAACTCAAGGAAGTAAGAAGATAGCATATGGAATGCAGTTCCAAGGGAACTA
AGGGACCAGCTACCTCTCTCCCTTGGGAGCTTTTATCATCCATAATTTTTGCTTGCTTTTAACCTGGGCCCTTTTGTCGT
TCATGGGTGGCCTAGTTCTTTGTTGTGTGAAGCTTGCTCATGCATACACAGCCCCTGCCTTGCT--GGGGAATGCCATGA
TGTAATCTAACTCCTTTCTTTTACGAATACGCAAAGCTTGCTTTCGCGAAACACGTGTTGTACCACCCCTATGTAATCTA
ACACCGAGTAGTTGTGCCCCAAATATAATGATACTAATA-----------------------------------------
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>chr1D_3
--GGAAGTTCCTGTTTCTATTCTACCTGTACCAATCAATCCAATCATCCATAGCATTCGAGTGTCGTAGCTCTAAGCTCA
TTGACGCTGACAAATTTCTATGCTTCAAGAAAATTCAGCTGTAGTAGGAAATACGTTTTTTCAGGATACATAAACTATGC
CCTGGAGATTCATTCTGTGTAACATAGTAAACAGCTTCAATCTTCAACACAGTGTAACGTTTTAGTTTGTCAAGAACCAA
TCTTTAGAAGGTTTGCACAGAGTTTAGTACTCCCAGCTATTTGTTATGTAAGAATAAATGTCCTTTCTGTTTCTTATTCG
CAGGGAATTTTAGCTGTTGATGTCATTT-ATAGTCACTTAAATTCCTCCAAAACTCTTTAGTAGTAAATATCTTGTAAAG
GTAGAATTTTTTGATTTAGTGAATATGTTCTCCTTACATTAAACGCTCATCGTTCCCTCATTAACTTTTAATTTAGCCAA
ATTGCTGGATCCCTGCTCTCTGACAAATATCTTGTAAAGGTATTTCGTAAATTTCAGTGGCAGACGTGGTTTCTTTATTT
GTAAAAAATTAACAGTGTAATTGGATATTTATAATTGTATCCTATCTAGAAATGTTTATTTATCTTATTTCTAGGTTTGC
TTATTTGGGAACATGTTCTAGGGCACTTTACTTCTGCGCATTTCTGCGGTGCAGCGTCATCATATTCTGAAATCCTTTTC
CTGTCTAGGGTGTAAACCACACAAGCCACATGAAAGAGAACTCATAGATCAACTTGCAGAATTTGTAGTTGGGATTTTAT
TTCAGCAGTTTCATGAAAAAGAAAAGTACTTTGTCTTTTTGTTATGCTTTATTCACAGGAGGACATTATCAATTGGAATA
AAGATTTTGCATGCATAAATAAAATTCTGTTTCCCTCTATATATACGGCCTCCTTCGGTTTGCATGTCTCATTGCAGCCA
CCTCAGTTCTCTGTGTGTGCTTGTACTGACATATAAGGCCAACTATGGACTACTCAAATTTGCGTCGCCAAATTACCTTC
ATGAAGAAAAGTTTCTTTGATCAGGTTTATTGGCTCCCCCTTTGTTCATTTGAAATCTGGGTTTATAATCAATTACTGTG
TTGCACATGTTAAGCTCTTCTCCCAAGAGCTGCAAGTTTTGACTGGATAACTTGTAAGCCGAATTACTCTCGTAGTGATT
TTCTTCTGATAGAATGATGACCTTTGGACATCTCCACATGACATATCCACTGAGGCTCTGAAAACTTT---CTACTGCAT
TTTTTTCTTCCAAATATATGGAGTTTCTCTCTGGTGGCGGGACTCAATGGATTCTTCACTCATTCTGTTTCAAAATTTTA
CTTAATTGCAACTGCATAACTCATTCACTTTGTAATCTGGTCTAATGGGACAATATGGGGGCAAATGCCAACTTGGATAC
TATTTTCCCACACAATAGTTATGGCACTCTTTTTTTTTCCACAAACGCATCGCCTGCTGAATGCATCATGATGTTTAAAA
TTAGATATATGGGCAATGATGTAATAGACCATAAGAATAGAAAATCACTCTCTTTATTTCCTTCGTTCTATTCCTTTGAG
AATATACAAAAGGTTGGGGTGTTCAAACTTTACAGAGTAATCATAGAGGTAGG-TCATTTTGATGATACATTAGTATCTT
CTAGGCAAATATTAGGGTGCTCTTTATACCTAAGCCAGGTTGACACCTAAAACCACCTTGATGTAGCTGACTCAGTTTGA
TTTTTGACAAATATTAAGGTGCTTGTTATACTTAGCTAGGTTGAAGCCTATAACAACTTGCTGGGACTTTGTTTGATATT
TGAATAATTATTTTGATTTACCCATGTAATCGAGAATCTTTTTTTCTGCCGTGGACCACACTAATGGTATTTTATTATAT
GTTGTATTTCAGGCTTCTTTGATTTGCCTAATAATCTACTTTGGGCTATTCCTGCAGGGTTACCTTGATGAACAGTTCAA
TCAGCTGGAAGAACTGCAGGACGAATCAAGCCCCAATTTCGTTGAGGAAGTTGTGGCTTTGTTTCTGAAAGATTCGCCGA
GATTGTTGTCAAACATAGAACAAACAATGTAAGCAATACGTCTGTAAGTCAGGCCATAACTGTC------TTTTTTTTGG
CTGGAACAGTCCATACAAATGGTTTCAAGACATATCATATCTACCAAAAATGGAATCATATTTAGTGCATTCACTTTCCA
GTTCCTTTTGATGCAGTGGGAAGTACCCTCAGGATTTCTACCGGTTAGATTCTCTTGTGCACCAGCTCAAAGGCAGCGGA
TCCAGGTACAGGACCTGTGAATATGCTCAGAAAACACCCGGTGTGAATAATCTTATTGCGGGTCTCATCACCACAGAATC
ATCCATTCAGTATATACATGATTTAAGAGTGCTTAGTGATGTGAGAGAACGAATATTATTAGCAAATGGAAATGCTATCA
CCGACAGCTTTACCTTTTGCCTGCCTTATGTGTTCTGATTCACTGAAGTTGACTTGTGTTTGGCGCAGCATTGGAGCAGT
GAGGATGAAGAACGAGTGCTCGGTGTTTAAGGCACACTGCAATGACAGGAATCTGGAAGGGTATTGCATCACTCGTGCTT
TGCTTTCATCTCTTGTCGCCAGGCGATTTGCTCATCTCACCTGTTGTAGTGTGTCCATGGTTGTGCATCAGATGCCGCAG
GTCACTGCAGAAGATGAAGAGGGAGCATGCCACTCTGAAGCAGAAGCTGGAGTCATATTTTCAGGTACATTTGACACCTT
TCCCTTGAAAATCTTTCATGGTTAAACAACATTTTACTTATCTTGTATTTAATGCATGCCAATGATGATACAGTTACTGC
GGCAAGTCGGGCCTCGCGAGCATGCCGTGAACTCAAGGAAGTAAGAAGATAGCATATGGAATGCAGTTCCAAGGGAACTA
AGGGACCAGCTACCTCTCTCCCTTGGGAGCTTTTATCATCCATAATTTTTGCTTGCTTTTAACCTGGGCCCTTTTGTTGT
TCATGGGTGGCCTAGTTCTTTGTTGTGTGAAGCTTGCTCATGCATACACAGCCCCTGCCTTGCTATGGGGAATGCCATGA
TGTAATCTAACTCCTTTCTTTTACGAATACGCCAAGCTTGCTTTCACGAATCATGTGTTGTACCACCCCTATGTAATCTA
ACTCCGAGTAGCTGTGCCCCAAATATAATGATACTAATA-----------------------------------------
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>chrUn_3204
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-----------------------TATGAAGAAACTAGTAGAATGCCCGTGCGTTGTTAGGGGCTACAATGCATATACATG
GACCAAACAAATAAT----TAATGT--TCTCCAAGGTTGACGCTTATTTCTCCCTCATACGCCCGGGCGTGTTTGGACAT
CAAACGACCGTCCATTGGGCTCTTGAAAATCCAACCGTCTAAACAGTTTGGCTAGCCCCAAATCCAACACATATGTGGGG
AGAAATGTGGTTGTCTGGACTATCCAACATGTTATATCCAATACACGGCCCCA-CCCCCTGATG-CACCCCTCCTATTTT
GTCCTCTCTTTGAAACCGGACGATGCCCACCTCACCTTCGCCATGTCGCCCTCTCCCCTTCACACCGGACTTTCCCACGG
ACCGCCAAGGAGGAGTCCTCCGTCAACTGCCTTGA-----T--CCCCCCT-TGTTCGTGTCGATCCACCACCGCCATCAA
GGTGGTCGAGGCATGCGCCGCCCATGACGCTCCT-GAGCTAAGAAGGTGGATCCGATGTCTCTTGAGCCATTGTCAGGTT
GTAACATATACAGTTGAACGGTGTGCATTACCATGAAACAACAATATGATGTTCATTGTTGGGAATGCAATTGATACACC
ACTGTGTTAATTATTAACTCTTGAAGCAACCAACCAATGCATTTACCCTTCTATATTAACCCAAAAATTGTACAACTTGA
TGAAAAAAA----T----GAACCGCTC
>chr1D_3212
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-------------------------------TACTAGTAGAATGCCCGTGCATTGCTACGGGCTACAATACATATACATG
AATCAAATAAATGAT----TAACATCGCCTCCAAGGTCGACACTCATTTCTCCCTCGTACGCCTGGGCGTATTCAGGCAT
CAAACCGGCACCCATCATGCTCTTGAAAATCCAATCATCTGAACAGTCAGGGCTCCCCCAAATCCAGCACATATGTGAGG
AGAAATGTGGTTGTCTGGACTATCCAACATGTTATCTCCAATACACGGCCCCATCCCCATGATG-CACCCTTCCTATTTT
GTCCTCTATTTTAAACCGGATGACGCCCACTTCTCCTTCGTCATCTCGCCCTCTCTCCTTCACACCGGACTTCCCCAG--
------------------------AGCCGCCCTGATCCCCT--CCCCCAG-TATTCATGTCGATCCACCACGACCATCAA
GGTGGATGAGGCGTGCGCTGCCCATGACACCCCCTAAGCCAAGAAGGCAGATCTGATGTCTCTTGAGCCATTGTCACGTT
GTAACATATA--GTTGAATGATGTGCATTACAACGAAACAATAATATGATGTTTGTTGTTGGGCATGCGACTGGTACACC
ATCGTGTTCGTCATTAACTCTTGAAGCAACCAACCAATGCATTTACCCTTCTATCGTAACCAAAAAATTATATGACTTGA
TGAAAAAAAA---T-------------
>chr2D_3212
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-------------------------------TACTAGTAGAATGCCCGTGCGTTGCTATGGGCTACAGTGCATATACATG
AATCAAACAAGTGATCGGTTAAGGTCGTCTCCAAGGTCGACGCTCATTTCTCCCTCATAAGCCCGGGCATGTTCGGACAT
CAAACATGCGCCCAACGGGCTCCTGATAATTCAACCACCTGAACAGTTATGGCTCTCCCAAATCCAACACATATGTGGGG
AGAAATGTGGTTGTCCGGACTATCCAACATGTTATCTCCAACACACGGCCCCA-CCTCCACGGCACACCCTTCTTATTTT
ATCATCTCTTTAAAACCGGATGACGCCCACCTCACCTTTGCCATGTTGCCCTCTCCCCTTCACACCTGACTTCCCCATGT
ACTGCTAAGGAGGAGTCCCCTGCCAACCGCCCTGATCCCA------CCTG-TGTTCATATCGATCCACCACTGCCATCAA
GATGGATGAGACATATGCCGCCCGTGACGCCCCCCAAGCCAAGAAGGCAGATCCG-TGTCTCTTAAGCCATTGTCATGTT
GTAACATATACAGATGAATGTTGTGCATTACCACGAAACAAAAAAATGATGTTCATTGTTGGCCATGCAACCCATACACC
ACCGTGTCTGTTAT-AACTGTTGAAGCAACCAGCCAACGCATTTACCATTCTATCTTAACG-AAAAATTATACGACTTGA
TGAAAAAATA---TATGAA--------
>chr2A_3212
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-------------------------------TACTAGTAGAATGCCCGTGCGTTGCTACGGGCTACAATACATATACATG
AATCAAATAAATGAT----TAACGTCACCTCCAAGGTCGACACTCATTTCTCCCTCATACGCCTGGGCGTATTCAGGCAT
CAAATGGGCGCCCATCATGCTCTTGAAAATCCAATCATCTGAACAGTCAAGGCTTCCCCAAATCCAGCACATATGTGGGG
AGAAATATGGTTGTCTGGACTATCCAACATGTTATCTCCAATACACGGCCCCATCCCCACGATG-CACCCTTCCTATTTT
GTCCTCTATTTTAAATCGGATGACGCCCACTTCTCCTTCGTCATCTCGCCCTCTCTCCTTCACACCGGACTTCCCCAG--
------------------------AACCGCCCTGATCCCCT--CCCCCTG-TATTCATGTCGATCCACCACGACCATGAA
GGTGGATGAGGCGTGCGCTGCCCATGACACCCCTTGAGCCAAGAAGGCAGATCTGATGTCTCTTGAGCCATTGTCACGTT
GTAACATATA--GTTGAATGATGTGCATTACAACGAAACAATAATATGATGTTTGTTGTTGGGCATGCAACTGGTACACC
ATCGTGTTCGTCATTAACTCTTGAAGCAACCAACCAATGCATTTACCCTTCTATCGTAACCAAAAAATTATATGACTTGA
TGAAAAAAAAATAT----GAACCGCTC
>chr1A_3213
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--------------------------------ACTAGTAGAATGCCCGTGCGTTGCTACGGACTACAATACATATACATG
AATCAAACAAATGAT----TAACGTCGCCTCTAAGGTCGACACTCATTTCTCCCTCGTACGTCTGGGCGTATTCAGGCAT
CAAATGGGCGCCCATCATGCTTTTGAAAATCCAATCATCTGAACAGTCAGGGCTTCCCCAAATCCAGCACATATGTGAGG
AGAAATGTGGTTATCTGGACTATCCAACATGTTGTCTCCAATACACGGCCCCATCCCCACGATG-CACCCTTCCTATTTT
GTCCTCTATTTTAAACCGGATGACGCCCACTTCTCCTTCGTCATCTCGCCCTCTCTCCTTCACATCGGACTTCCCCAG--
------------------------AACCGCCCTGATCCCCT--CCCCCTG-TATTCATGTCGATCCACCACGACCATCAA
GGTGGATGAGGCGTGCGCTGCCCATGACACCCCCTGAGCCAAGAAGGCAGATCTGATGTCTCTTGAGCCATTGTCACGTT
GTAACATATA--GTTGAATGATGTGCATTACAACGAAACAATAATATGATGTTTGTTGTTGGGCATGCGACTGGTACACC
ATCGTGTTCGTCATTAACTCTTGAAGCAACCAACCAATTCATTTACCCTTCTATCGTAACCAAAAAATTATATGACTTGA
TGAAAAAATA---TATATGAACCGCTC
>chr4A_3220
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---------------------------------------AAATGCCTGTGCGTTGCTACGGGCTACAATGCATATACATG
AACCAAATAAATAAT----TAATGT--TCTCCAAGGTTGACACTTATTTCTCCCTCATACGTCTGGGCGTGTTCGGACAT
CAAACGAGCGTCCATTGGGCTCTTGAAAATCCAACCGTCTAAACAGTTTGGCTAGCCCCAAATCCAACACAT-TGTGGGG
AGAAATGTGGTTGTCCGGACTACCCAACATGTTATATCCAATACACGGCCCCG-CCCCCCGATG-CACCCCTCCTATTTT
GTCCTCTCTTTAAAACCGGATGACGCGCACCTCACCTTCGCCATGTCGCCCTCTCCCCTTCACACCGAACTTCCCCACGG
ACCGCCAAGGAGGAGTCCCCCGTCAACTGCCTTGA-----TCCCCCCCCCCTGTTTGTGTCGATCCACCACCGCCATCAA
GCTGGTCAAGGCATGCGCCGCCCATGACGCCCCT-GAGCTAAGAAGGCGGATCCGATGTCTCTTGAGCCATTGTCACGTT
GTAACATATACAGTTGAACGATGTGCATTACTACGAAACAACAACATGATGTTCATTGCTGGGCATGCAATTGATACACC
ACCGTGTTAATTATTAACTCTTGAAGCAAGCAACCAATGCATTTACCCTTCTATATTAACCCAAAAATTGTACAACTTGA
TGAAAAAAAA---T----GAACCGCT-
>chr7A_3242
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-------------------------------------------------------------GCTACAATACATATACATG
AACCAAACAAATAAT----TAATGT--TCTCCAAGGTTGACTCTTATTTCTCCCTCATACGTCTGGGCGTGTTTGGACAT
CAAACGGGTGTCCATTGGGCTCTTGAAAATCCAACCGTCTAAACAGTTTGGCTAGCCCCAAATCCAACACATATGTGGGG
AGAAATGTGGTTGTCTGGACTACCCAACATGTTATATCCAATACACGGCCCCG-CCCCCTGATG-CACCCCTCCTATTTT
GTCCTCTCTTTAAAATCGGATGACACCCACCTCACCTTCGCCATGTCGCCCTCTCCCCTTCACATTGGACTTCCCCACGG
ACCGCCAAGGAGGAGTCCCCCGTCAACTGCCTTGA-----T--CCCCCCT-TGTTCGTGTCGATCCACCACCGTCATCAA
GGTGGTCGAGGCATGCGCTGCCCATGACGCCCCT-AAGCTAAGAAGGCGGATCCGATGTCTCTTGAGCCATTGTCACGTT
GTAATATATCCAGTTGAACGACGTGCATTACCACGGAACAACAATACGATGTTCATTGCTGGGCATGCAATTGATACACC
ACCGTGTTCGTTATTAACTCTTGAAGCAACCAACCAATGCATTTACCCTTCTATATTAACCCAAAAATTGTACAACTTGA
TGAAAAAAT---------GAACCGCTC
>SNPs
------------------------------------------------S-------------------------------
----S-------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
------S-------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
----------------------------------------------------------------S---------------
-------S-------------S----------------------------------------------------------
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--------------------------------------------------------------S-----------------
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-------------------------S--------------------------S---------------------------
-------------------------------------------------------------------------------S
----------------------------S-S-------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------S-----------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-----------S----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------S----------------------S-----------------------------------
------S-------------S----------------------------S-----------------------------S
-----------------------------------------------------S---------SS-S-------------
-------------S------------------------------------------------------------------
--------S---S-------------------------------------------------------------------
------------------------------------------S-------------------------------------
---S----------------------------------------------------------------------------
-------------------S-------------------------S--------S-------------------------
----------S---------------------------------------------------------------------
----------------------S---------------------------------------------------------
SS-------------------S-----
>forward_99
---------------------------------------------------------------------------GCTCA
TTGATGCTGACAAATTTCG-------------------------------------------------------------
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>reverse_1306
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-------------------------CCTCTCTGGTGGCGGGAC-------------------------------------
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>forward_863
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---------------------------------------TGTTATGCTTTATTCACAGGAGGG-----------------
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>reverse_2428
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---------------------------GGTGCTTAGTGAAGTGAGAGA--------------------------------
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---------------------------
>forward_1333
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---------------------------------GTGGCGGGACTCAATGGATC---------------------------
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>reverse_3207
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------CGTAGCTGTGCCCCGAATAT------------------------------------------------------
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---------------------------
