>input_sequence_41344
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATGGCAGTGAGCCTC
CTGGCCAATGACGTGTCGGACCTCTGCATCGGCAAGCCGGCCGTGAGGTCGCTCCCGCTCTCCGCGGCCGCCGGCGACCT
CGCCGCCACGGTCCGCAAGGGGCCCCGCGCCGCTGCCGCCGCCTGCATCGCCGTCGGCCCGGCGCGCGGCGCCGTGGTGG
GACGCGCCGGCCTCGCCGACGTCCTCTGCCTCCTCTGCTCCTCCCCCGACGCGCTCGGGCGCCCCGCCGCCGCGCTCGAC
CGGCCCGTCTCCGCGCTCCTGCCCAAGGACGGCGCCGGCGAGGTCCGCCGCGTAGATCCCCGCTCCAGGTACTCCCTCGG
CCCTTCCCCTCTTGTTGG--CCCCGCTCGGTTAATTTACTGTGATTCCGTTACTTTTTTCGTTGAAACGTACGCGTCTTT
GGTCTTTGCGGACGCCTGTTCAAGATTGGAGTTTTGCTAAAGGTCTAGGTGGGGGCAAGGCAAAGTTACAGGGCGACGCG
GTTCAAGTCAAGATCTTAATTGAAAAGATTTTGTGAGGGAAAGATCATAATTTTGTTAAAAAAATAGGAA--TAATATTT
TGATGTTGGAGATGTGCGATGTTCCTCTCCCCATTGTTGTA-------AAAAAAA-------GTTTCAGGAGGAAC----
-----CATAATTTGACGATTCTTATCGAATTACGTGGAGAATTTGGCCTGCGATTGGAATATGCGTGGCGATTCGAACGA
GTGGCTAGTA---GTATCTGATAACGAAGAAAGGGGGGCAACTCGTGTCAAATCGTCCGACGCATCTGGGACAATCTTGT
GGTGCCAATCCCCGTGTCTTCCTATGCCGATCGCGACAT-------CCCCCATGTCTCCTTGTGAGA---TAGTCGACAG
GCTCGGTCGCTTCCACGGAGATTTTTCTTGCCCTACATGTGGTTCAGAAATTGCGCTTTTTTGATCGAATCCTGGACAAA
AAAACACAGCAACTTTTTGTTAAGGATCTTTGATGTGCGCGGCATCGGAATATGCCTACCCTTTTGTTTTTGGCGTTAGA
TCTAAGAAATTTTTCTTGCCCTCTACTAATAAACTATGTATATTCGATTTTGTTCAGTTTTGCTGATGCGTGTGACTGAT
CTTTCCTGCAGTGTCTTGGAAGCTCTTGATGAGATCTTGAGCGGCGCACAGGTGCTCGCCGTCCCGCTCCGCTCGGGCGG
CCGCAAGAAGCAGCTGGGCGGCGTCGCTGGCGTGACCGGCGACTTCTGCTGGCTCACGCAGGAGGACCTCGTCCGCTACT
TCCTCAACTCCATTTCCCTCTTCTACCATGTCGCCGCCCGCTCCGTCTCCTCCCTCGGCCTCGTGCGCCCCGACTTCCTG
TCGGCGCGTCCCGACGAGGCAGCCCTGTCCGCCGTCCCCCTCATCCGCCGGGCCATCGCCGCAGAGACCGCGGTCGCCGT
GGTCAGCACCGACGGCCACCTCGTCGGCGAGATCTCCACCGCGCACCTCGCTGCCTGCGACGAGACGGCAGCCGCGGCCA
TCGCCACGCTCTCGGCGGCCGACCTCATGGCATACATCGACTACTTCGGCTCGCCGCCAGAGCACATCCTGCGCGCCATC
AAGACCGGGCTCAAGGCCAAGGGCCTTGACGCCATGCTTGAGCTGATGGAGGACGAGACGATGACGTCGTTCTCCCTCTC
TTCCTCGTCGTCAGATGACGACACCGGCCGGCCGCACCTGAGGCGCCCGTCGTCGGGGAGCTTTGGGCGCCGGTCGACCG
AGGAGCCCGTGGTGTGCAGTCCCGCGAGCTCGCTGGTGGCCGTCATGGTGCAGGCCCTCGCCCACCGCGTGAGCTACCTG
TGGGTTCTCGACGAGGAGGACGACTGCCGTCTCGCCGGGATCGTCACCTTCGCCGACATCCTCAGGGTGTTTCGTGAACA
GCTGCAGTGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1D_1_TraesCS1D01G167600
ATAGCATTGCTCAATACTACTACCTCCATCACAGAATATAAGACGTTTTTACAAGCTAATATAGGTTACAAAAACGTCCT
ATATTATGGGACAGAGGGAGTAGGTGATACTACTCCATCCGTCCCAAAAAAATGTCTTAGATGTGTTATCGAGACATATT
TTAG---TAGGTACATTCGTATCAAGATAAATGTA-GACAAACTTTTTGGAACAGAGATAATATGTTCCAAATTATATGA
CATTTTGGATATTTTGATAAGGATTACATACGGACTGAAATGAGTGAACAAGCGCTCTAAAACACGTCTATGTACACCAG
ATTTGGAAAAAAGTGAAGACATCTTAAAAATAGGAACGGGAAAGTACTAAATACCGTATTGTTTAGAGGAGATCGTTATG
TAGACCGAATCTGAACCAAAGATACTGTAAAAA-GCATCATATGACCCAAAAACAGTCCCAGGAAATCTTGAACTTGTGC
TCCTTTGACTCCGAATG--CCGG-TAGATTCGCCGGCTACGGGAGCACTACTGCACTGCATACGTCCTGGAATCCGGGCA
AGATGCACCACTGCA---CTGCATATCTTCTGGAATCAAGCCCAGGTCTC-----CTCGGCTCGGCTCAAACTCAAGCTA
GGTTCTACTAAATCAGAGCGGAGCC-------GGATACAGCTCATCCACAGCATGACACCACCGCATAAACCACGGCTAC
AGTCAAACCAACCAAGCGTAGCCCCGACCCTTATCACTTCCCCGTGGGCCCGACACACACCCGACCCCACCCGTCATACG
CGCACAGCTGCCGCAAGACGCGTACCGTCGTCCCCGGCTCCGCCAAAGCCTATATATACTCCCTCCCGACCCGCCTGCCG
TGGTTAAAAATCCAGATCCCCCTCTCGCCTCTCGTCCTCCTCCCGGCCTCTCTCTCTCCTCGTCCTCCCGTC-GAAAAAT
TTCCCCTTCC-ACACCGCGTGAGGGTTTCGTCCTCGAAACCGGCCCAGGGTCCGCCCGCGAGTGCATGGCAGTGAGCCTC
CTGGCCAATGACGTGTCGGACCTCTGCATCGGCAAGCCGGCCGTGAGGTCGCTCCCGCTCTCCGCGGCCGCCGGCGACCT
CGCCGCCACGGTCCGCAAGGGGCCCCGCGCCGCTGCCGCCGCCTGCATCGCCGTCGGCCCGGCGCGCGGCGCCGTGGTGG
GACGCGCCGGCCTCGCCGACGTCCTCTGCCTCCTCTGCTCCTCCCCCGACGCGCTCGGGCGCCCCGCCGCCGCGCTCGAC
CGGCCCGTCTCCGCGCTCCTGCCCAAGGACGGCGCCGGCGAGGTCCGCCGCGTAGATCCCCGCTCCAGGTACTCCCTCGG
CCCTTCCCCTCTTGTTGG--CCCCGCTCGGTTAATTTACTGTGATTCCGTTACTTTTTTCGTTGAAACGTACGCGTCTTT
GGTCTTTGCGGACGCCTGTTCAAGATTGGAGTTTTGCTAAAGGTCTAGGTGGGGGCAAGGCAAAGTTACAGGGCGACGCG
GTTCAAGTCAAGATCTTAATTGAAAAGATTTTGTGAGGGAAAGATCATAATTTTGTTAAAAAAATAGGAA--TAATATTT
TGATGTTGGAGATGTGCGATGTTCCTCTCCCCATTGTTGTA-------AAAAAAA-------GTTTCAGGAGGAAC----
-----CATAATTTGACGATTCTTATCGAATTACGTGGAGAATTTGGCCTGCGATTGGAATATGCGTGGCGATTCGAACGA
GTGGCTAGTA---GTATCTGATAACGAAGAAAGGGGGGCAACTCGTGTCAAATCGTCCGACGCATCTGGGACAATCTTGT
GGTGCCAATCCCCGTGTCTTCCTATGCCGATCGCGACAT-------CCCCCATGTCTCCTTGTGAGA---TAGTCGACAG
GCTCGGTCGCTTCCACGGAGATTTTTCTTGCCCTACATGTGGTTCAGAAATTGCGCTTTTTTGATCGAATCCTGGACAAA
AAAACACAGCAACTTTTTGTTAAGGATCTTTGATGTGCGCGGCATCGGAATATGCCTACCCTTTTGTTTTTGGCGTTAGA
TCTAAGAAATTTTTCTTGCCCTCTACTAATAAACTATGTATATTCGATTTTGTTCAGTTTTGCTGATGCGTGTGACTGAT
CTTTCCTGCAGTGTCTTGGAAGCTCTTGATGAGATCTTGAGCGGCGCACAGGTGCTCGCCGTCCCGCTCCGCTCGGGCGG
CCGCAAGAAGCAGCTGGGCGGCGTCGCTGGCGTGACCGGCGACTTCTGCTGGCTCACGCAGGAGGACCTCGTCCGCTACT
TCCTCAACTCCATTTCCCTCTTCTACCATGTCGCCGCCCGCTCCGTCTCCTCCCTCGGCCTCGTGCGCCCCGACTTCCTG
TCGGCGCGTCCCGACGAGGCAGCCCTGTCCGCCGTCCCCCTCATCCGCCGGGCCATCGCCGCAGAGACCGCGGTCGCCGT
GGTCAGCACCGACGGCCACCTCGTCGGCGAGATCTCCACCGCGCACCTCGCTGCCTGCGACGAGACGGCAGCCGCGGCCA
TCGCCACGCTCTCGGCGGCCGACCTCATGGCATACATCGACTACTTCGGCTCGCCGCCAGAGCACATCCTGCGCGCCATC
AAGACCGGGCTCAAGGCCAAGGGCCTTGACGCCATGCTTGAGCTGATGGAGGACGAGACGATGACGTCGTTCTCCCTCTC
TTCCTCGTCGTCAGATGACGACACCGGCCGGCCGCACCTGAGGCGCCCGTCGTCGGGGAGCTTTGGGCGCCGGTCGACCG
AGGAGCCCGTGGTGTGCAGTCCCGCGAGCTCGCTGGTGGCCGTCATGGTGCAGGCCCTCGCCCACCGCGTGAGCTACCTG
TGGGTTCTCGACGAGGAGGACGACTGCCGTCTCGCCGGGATCGTCACCTTCGCCGACATCCTCAGGGTGTTTCGTGAACA
GCTGCAGTGAGGCGGAGATGAAAAGAAAGGCTTGGAGTTTTTGCAGTGGACCTGAACTCCGGAGAGGATTTGCTGTTGGT
AGGGCGCTGAGTTGCGTCTGCCTTGTTCGTTTCCTGTGAAATGTGATGAAGATGAACTGTTTT-TAATTTGTTCTTTGTT
GAAACATGTTCCC-GTTTGCTCTGTTGTCTTTTTTTTTGCTTGGTGGTGCTGAACCTGAAGATTTCCTTATGCTT---TG
ATAATAAAGCAGCATCGT-CATTTGATGCTGTGGTACAATGCTGTTTCTAAGCT------GACGATGTAGAGATTAGCCA
TCCATTTTTATTGGTGCA---TTTTTTGTTTTGTGAGATTCTACATAGGAAAACAAACAGTACTAGCATTTTCTGAATCA
T-AGTAAAACTTAGTATACTCCGATAAACTGAACATCTGAACTGACACACTGGAGTGGCATCTATTTACTGCGA-TACTA
GAATATCCCACAAGTGATGTTCATTGGATTTTTCAACTGTGGCTGGTGTCGGTCGGGTGCCGTGACCTACAGCTGCAGGC
AACAGCCAAGCCTCAGAGATGGAAGTGTTGATAGATGAGGACAGGAGTGGCATGTTTCTAGCCGTGGAGACGAATGAATG
TGCAGTGCCAAACTGTATATGTACAGATGTTAAACCTGGCAGTCTCATTGTGCTTGTGGCTACTGAATCTCTGAAGTTAT
GCTTTGCTGTCCATGCTTGCAACCGCTGACACTCGGTGATCCTTGCTGTCGGATAACTCTGGCGATGACAGCAGTAGACC
GGTGTGTGTGATAGGGGCCTAGAGGGCAAGTGTTCCTCTGATTAATGTCTCAATAACAAGATTA-----TAATCACTAGG
CATAACCTTGAGAGGAGATAAACGAACAAAGAAACTGAGGAGATAACATCGAGGCTCTACCCAGTCCCAGACTCCCAGTG
CTTCACCTGTTCCTTCTGTACTGTATATGTAGCCAAAAGGATTTGGCCTGCACTACCCAGCGGTGGCCCGAC
>chr1B_122
--------------------------------------------------------------------------------
-----------------------------------------TCCCAAAAAACTGTTTTAGATGTGTTATCTAGACATATT
TTAGTGTTAGGTATATTCGTATCAAGATAAATGTAAGACAAGCTTTTTGGCTTTTCGGGACGG-------------ATGA
CATTTTGAATAGTTTAATAAAGACTACATATAAACTAAAATGAGTGAACAAACATTTTAAAACATGTCTATATACACCGA
CTCGAAAAAAAAGCCAGGACATCTCAAAAATAGGAACGGGAAAGTACTAAATACCGTATTGTTTAGAGGAGATCGTTATG
TAGATCGGATCTGAACCAAAGATACTGTAAAAAAGCATCATATGACCCAAAGACAAACCCAGAAAATCTTGAACTTGTGC
TCTTTTGACTCGGAGAAGCCCGG-TAGATTCGCCGGCTACGGGAGCACTACTGCACTGCATATGTTCTGGAATCTGGGCA
AGATGCACCA---CA---CTGCATATCTTCTGGAATCAAGCCCAGGTCTC-----CTCGGCTCGGCTCAAACTCAAGCTA
GGTTCTACTAAATCGGAGCCGAGCC-------GAATACAGCTCATCCACACCATGACACCACCGCATAAACCACGGCTAC
AGTCAAACCAACCACGCGCAGCTCCGACCCTTATCACTTCCCGGTGGGCCCGACACACGCCCGACCCCACACGTCATACG
CGCGCAGCTGCCGCAAGACGCGTACCGTCGTCCCCCGCTCCGCCAAAGCCTATATATACTCCCTCCCCACCCGCCTGCCG
TGGTTGAAAATCCAGATCCCCCTCTCGCCTCTCGTCCTCCCCCCGGCCTCTCTCTC--CTCGTCCTCCCGTCGGAAAAAT
TTCCCCTTCCCACACCGCGTGAGGGTTTCGTCCTCGAAACCGGCCCAGGGTCCGCCCGCGAGTGCATGGCAGTGAGCCTC
CTGGCCAATGACGTGTCGGACCTCTGCATCGGCAAGCCGGCCGTGAGGTCGCTCCCGCTCTCCGCGGCCGCCGGCGACCT
CGCCGCCACGGTCCGCAAGGGGCCCCGCGCCGCCGCCGCCGCCTGCATCGCCGTCGGCCCGGCGCGCGGCGCCGTGGTGG
GACGCGCCGGCCTCGCCGACGTCCTCTGCCTCCTCTGCTCCTCCCCCGACGCGCTCGCGCGCCCCGCCGCCGCGCTCGAC
CGGCCCGTCTCCGCGCTCCTGCCCAAGGACGGCGCCGGCGAGGTCCGCCGCGTAGATCCCCGTTCCAGGTACTCCTTCAG
CCCTTCCCCTCTTGTTGG--CCCCGCTAGGTTAATTTACTGTAATTTCGTTATTTTTTCCGTTGAAACGTACGCTTCTTT
GGTCTTTGCGGACACCTGTTCAAGATTGGAGTTTTGCTAAAGGTCTAGGTGGGGGCAAAGCAAAGATACAAGACGACGCG
TTTCAAGTCAAGATC-TAATTGAAAAGCTTTTGCGAGGGAA-GATCATAATTTTGTT-GGAAAAAATATGAGTAATATTT
TGATGTTGGAGATATGCCATGTTCCTCTCCCCATTGGAGTAGTAAAATAAAAAAA-------GTTTCAGGAGGAACATAT
AGGTGCATAATCTGACGATTCTTATCGAATTACGTGGCGAATTTGGCATAGGATTGGAATATGCGTGGCGATTCGAACGA
GTGGCTAGTACTAGTATCTGATAAAGAAAAAAGGGGGA-AACTCGTGTCAAATCGTCCGACGCATCTGGGACGATCTTGT
GGCGCCGATCCTCGTGTCTTCCTGTGCCGATGGCGACACTCCCCAATCCCCATGTCTCCTTGCG----AGTAGTCGACAG
GCTCGGTCGCTTCCACGGAGATTTTTCTTGCCCTACATGTGGTTCAGAAATTGTGCTTTC-TGATCGAATCCTGAACAAA
AAAACACAGCGTCTTTT--TTAAGGATCTTTGATGTCCGTGGCATCGGAATATGCTTGCCTTTTTCTTTTTTGCGTTAGA
TCTGAGAAGTTTGTCTTGCCCTTCTCTAATAAATCATGA--ATTCGATTTTGTTCAGTTTTGCTGATGCATGTGACTGAT
CCTTCCTGCAGTGTCTTGGAAGCTCTTGATGAGATCTTGAGCGGCGCGCAGGTGCTCGCCGTCCCGCTGCGCTCGGGCGG
CCGCAAGAAGCAGCTGGGCGGCGTCGCTGGCGTGACCGGTGACTTCTGCTGGCTCACGCAGGAGGACCTCGTCCGCTACT
TCCTCAACTCCATTTCTCTCTTCTACCATGTCGCCGCCCGCTCCGTCTCCTCCCTCGGCCTCGTGCGCCCCGACTTCCTG
TCGGTGCGGCCCGACGAGGCAGCCTTGTCCGCCGTCCCCCTCATCCGCCGGGCCATCGCCGCGGAGAACGCGGTCGCCGT
GGTCAGCGCCGACGGCCACCTCGTCGGCGAGATCTCCACGGCGCACCTCGCTGCCTGCGACGAGACGGCAGCCGCGGCCA
TCGCCACGCTCTCGGCGGCCGACCTCATGGCATACATCGACTACTTCGGCTCGCCGCCGGAGCACATCCTGCGCGCCATC
AAGACCGGGCTCAAGGCCAAGGGCCTTGACGCCATGCTTGAGCTGATGGAGGATGAGACGATGACGTCGTTCTCCCTCTC
TTCCTCGTCGTCAGACGACGACACCGGCCGGCCGCACCTGAGGCGCCCGTCGTCGGGGAGCTTTGGGCGCCGGTCGACCG
AGGAGCCCGTGGTGTGCAGCCCCGCGAGCTCGCTGGTGGCCGTCATGGTGCAGGCCCTCGCCCACCGCGTGAGCTACCTG
TGGGTTCTCGACGAGGAGGACGACTGTCGTCTCGCCGGGATCGTCACGTTCGCCGACATCCTGAGGGTGTTCCGTGAGCA
GCTGCAGTGAGGCGGAGATGAAAAAAG-GGCTTGGAGTTTTTGCAGTGGACCTGAACTCCGGAGAGGATTTGCTGTTGGT
AGAGCGCCGAGTTGCGCCTGCCTTGTTCGTTTCCTGTGAAATGTGATGAAGAAGATCTGTTTTCTAATTTGTTCTTTGTT
GAGACATGTTCCCAGTTTGCTGTGTTATTTTTG--TTTGCTTGGTGGTGATGAACCTGAAGACTTGCTTATGCTTCGATG
ATAATAAAGCAGCATCGTGCATTTGATGCTGTGGTACAATGCTGTTTCTCAGCTTATGATGACAACGTAGAGATTAGCCA
TCCATTTTTATTTGGTGCATTTTTTTTGTTTTGTGAGATTCTACGTAGGAAAACAAACAGCACTAGCATTTTCTGAATCA
TGACTAAAACTTAGTATACTCCGATAAAGTGAACATCTGGACTGACACACTGGAGTGGCATCTATTTATTGCGACTGCTA
GAATATCCCATAAGTGATGTTCATTGGATTTTTCAACTGT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GGGCAAGTGTTCCTCTGATTAATGTCTCAATAACAAGATGATACAGTAATCACTAGA
CATAACCTTTAGAGGAGATAAACGAACGAAGAAACTGAGGAGATAGCATCGAGGCTCTACCCAGTCCC--------AGTG
CTTCACCAGTTCCTTCTCTACTG--TATGTAGCCAAAAGGATTTGGCCTGCACT------------------
>chr1A_218
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TATGTTCCAAATTATAAGA
CATTTTAAATATTTTAGTAGGGACCACATACGGACTAAAATGAGTAAACAAGCACTCTAAAACACGTCTATGTACACCAG
ATTTAGAAAAAAGTGAAGACATCTTAAAAATAGGAACAGGAAAGTACTAAATACCGTATTGTTTAGAGGAGATCGCTATG
TAGATCGAATCTGAACCAAAGATACTGTAAAAAAGCATCATATGACCCAAAAACAAACCCAGAAAATCTTGAACTTGTGC
TCTTTTGACTAGGAGAAGGCCGGTTAGATTCGCTGGCTACGGGAGCACTACTGCACTGCATATGTCCTGGAATCTGGGCA
AGATGCACCA---CTGCTCTGCATATCTTCTGGAATCAAGCCCAGTTCGGCTCGGCTCGGCTCGGCTCAAACTCAAGCTA
GGTTCTACTAAATCAGAGCCGCGAGCCGATTGGAATACAGCTCATCCACACCATGACACCACCGCATAAACCACGGCTAC
AGTCAAACCAACCACGCGCAGCTCCGACCCTTATCACTTCCCGGTGGGCCCGACACACGCCCGACCCCACCCGTCATAAG
CGCGCAGCTGCCGCAAGACGCGTACCGTCGTTCCCCGCTCCGCCAAAGCCTATATATACTCCCTCCCGACCCGCCTGCCG
TGGTTGAAAATCCAGATCCCCC-CTCGCCTCTCGTCCTCCTCCCGGCCTCTCTCTCTCCTCGTCCTCCCGTCGGAAAAAT
TTCCCCTTCCCACGCCGCGTGAGGGTTTCGTCCTCGAAACCGGCCCAGGGTCCGCCCGCGAGTGCATGGCAGTGAGCCTC
CTGGCCAATGACGTGTCGGACCTCTGCATCGGCAAGCCGGCCGTGAGGTCGCTCCCGCTCTCCGCGGCCGCCGGCGACCT
CGCCGCCACGGTCCGCAAGGGGCCCCGCGCCGCCGCCGCCGCCTGCATCGCCGTCGGCCCGGCGCGCGGCGCCGTGGTGG
GACGCGCCGGCCTCGCCGACGTCCTCTGCCTCCTCTGCTCCTCCCCCGACGCGCTCGCGCGCCCCGCCGCCGCGCTCGAC
CGGCCCGTCTCCGCGCTCCTGCCCAAGGACGGCGCCGGCGAGGTCCGCCGCGTAGATCCCCGTTCCAGGTACTCCCTCGG
CCCTTCCCCTCTTGTTGGCCCCGCTCTCGGTTAATTTACTGTGATTCCGTTACTTTTTTCGTTGAAACGTACGCGTCTTT
GGCCTTTGCGGACGCCTGTTCAAGATTGGAGTTTTGCTGAAGG-------------------------------------
-TTCAAGTCAAGATC-TAATTGAAAAGCTTTTGTGAGGGAAAGATCATAATTTTGTT-AAAAAATATAAA--TAATATTT
TGATGTTTGAGATATGCCATGTTCCTCTCCCCATTGTAGTA-------AAATAAAAAAAAGCGTTTCAGGAGGAACATAT
AGGTGCATAATCTGACGATTCTTATCGAATTGCGTGGAGAATTTGGCCTAGAATTGGGATATGCGTGGCGATTCGAACGA
GTGGCTAGTA---GTATCTGATAAAGAAGGAAGGGGGGCAACTCGTGTCAAATCGTCCGACGCATCTGGGACAATCTTGT
GGTGCCAATCCCCGTGTCTTCCTATGCCGATCGCGACAT-------TCCCCATGTCTCCTTGTGAGATAGTAGTCGACAG
GCTCGGTCGCTTCCACGGAGATTTTTCTTGCCCTACATGTGGTTCAGAAATTGCGCTTTT-TGAACGAATCCTGGACAAA
AAAACACGGCAACTTTTTATTAAGGATCTTTGATGTCCGTGGCATCAGAATATGCTTACCTTTTTGTTTTTGGCGTTAGA
TCTGAGGAATTTTTCTCGCCCTCTTGTAATAAATCATGA--ATTCGATTTTGTTCAGTTTTGCTGATGCATGTGACTGAT
-CTTCCTGCAGTGTCTTGGAAGCTCTTGATGAGATCTTGAGCGGCGCGCAGGTTCTCGCCGTCCCGCTCCGCTCGGGCGG
CCGCAAGAAGCAGCTGGGCGGTGTCGCTGGCGTGACCGGCGACTTCTGCTGGCTCACGCAGGAGGACCTCGTCCGCTACT
TCCTCAACTCCATTTCCCTCTTCTACCATGTCGCCGCCCGCTCCGTCTCCTCCCTTGGCCTCGTGCGCCCCGACTTCCTG
TCGGTGCGGCCCGACGAGGCAGCCCTGTCCGCCGTCCCCCTCATCCGCCGGGCCATCGCCGCGGAGACCGCGGTCGCCGT
GGTCAGCGCCGACGGCCACCTCGTCGGCGAGATCTCCACCGCGCACCTCGCTGCCTGCGACGAGACGGCAGCCGCGGCCA
TCGCCACGCTCTCGGCGGCCGACCTCATGGCATACATCGACTACTTCGGCTCGCCGCCGGAGCACATCCTGTGTGCCATC
AAGACCGGGCTCAAGGCCAAGGGCCTTGACGCCATGCTTGAGCTGATGGAGGACGAGACGATGACATCGTTCTCCCTCTC
TTCCTCGTCGTCAGACGACGACACCGGCCGGCCGCACCTGAGGCGCCCGTCGTCGGGGAGCTTTGGGCGCCGGTCGACCG
AGGAGCCTGTGGTGTGCAGCCCCGCGAGCTCGCTGGTGGCCGTCATGGTGCAGGCCCTCGCCCACCGCGTGAGCTATCTG
TGGGTTCTCGACGAGGAGGATGACTGCCGTCTCGCCGGGATCGTCACGTTCGCCGACATACTGAGGGTGTTCCGTGAACA
GCTGCAGTGAGGCGGAGATGAGAAGAAAGGCTTGGAGTTTTTGCAGTGGACCTGAACTCCGGAGAGGATTTGCTGTTGGC
AGGGCGCTGAGTTGCGCCTGCCTTGTTCGTTTCCTGTGAAATGTGATGAAGATGAACTGTTTT-TAATTTGTTCTTTGTT
GAGACATGTTCCGAGTTTGCTGTGTTATTTTTG--TTCGCTTGGTGGTGATGAATCTGAAGACTTGCTTATGCTTT--TG
ATAATAAAGCAGCATCGTGCATTTGATGCTGTGGTACAATGCTGTTTCTAAGCT------GACGACGTAGATACTAGCCG
TCCATTTTTATTGGTGCA---TTTTTAGTTTTGTGAGATTTTACATAGGAAAACAAACAGTGCTAGCATTTTCTGAATCA
TGAGTAAAACTTGGTATACTCCGATAAACTGAACATCTGGACCGACACACTGGAGTGGCATCTATTTATTCCGA-TGCTA
GAATATCCCACAAGTGATGTTCATTGGATTTTTCAACTGTGGCTGGTGTCGGTCGGATGCCGTGACCTACAGCTACAGGC
AACAGCCAAGCCTCAGAGATGGAAGTGTGGATAGATCAGGACAGGAGTGGCATGTTTCTAGCCGTGGAGACGAATGAATG
TGCAGTGCCAAACTGTGTATGTACAGATGTTAAACCTGGCAGTCTCATTGTGCTTGTGGCCACTGAATCTCTCAAGTTAT
GCTTTGCTGTCCATGCTTGCAACCGCTGACACTCGGTGATCCTTGCTGTCGGATAACTCTGGCGATAACACCAG------
-------------------TAGAGGGCAAGTGTTCCTCTGACTAATGTCTCAATAACAAGATTA-----TAATCACTAGA
CGTAACCTTGAGAGGAGATAAACGAACAAAGAAACTGAGGAGATAACATCGCGGCTCTACTCAGTCCC--------AGTG
CTTCACCTGTTCTTTCTCTATTG--TAAGTAGCCAAAAGGATTTGGCCTGCACTATCCAGGGGTGGCCCGAC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S---S--------------S---------
-------------S---------------------------S--------SSSSSS-SS-S-------------------
-------S-------S-------S------------S----------------S--------------------------
----S---------------------------------------------------------------------------
----S--------------------------------------------------SS-----S-----------------
--S--------S--SSS---------------------------------------------S-----------S-----
----------SSS-------------------------------------------------------------------
-------------------S-------------S----------------S-----------------------------
--------------S---S---S-------------------S---------------S---------------------
---S-------------------------------S--------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
----------------------------------------------------------S------S----S-S-------
S--------------S-----------S-----------------------------S--------SS------------
-------------S---S-------------------S------------------------------------------
-----------S-------------------------------------SS-----------------------------
------------------------S-------------------------------------------------------
----------------------------------------------S---------------------------------
------------------------------------------------------------S-------------------
------------------S-----------------S--S---------------S----S-------------------
---S--------------------S--------SS---SSS----------------------------S----------
-S---------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---S-----------------------------------------------------S-----------------
-------S------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-------------------S------------------------------------------------------------
-----------------------------------------------S--------------S--------S--------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--S------------------S----S-S---SSS--------------S------------S--S--------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------S-------S---
--------------------------------------------------------S-----------------S-----
----------------------------S-------S-------------------------------------------
----------------S-------------------------------------------S-----------S-------
------------------------------------------------------------------S---S---SSSSSS
SSSSSSSSSSSSSSSSSSS------------------------------------------------------------S
--------------------------------------------------------------------SSSSSSSS----
-----------------S-----SS------------------------------S----S-----------
>forward_106
--------------------------------------------------------------------------------
------TGGGACAGAGGGAGTAGGTG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_1731
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGATTGGAATATGCGTGGCG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_107
--------------------------------------------------------------------------------
-------GGGACAGAGGGAGTAGGTGA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_1887
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CCCCCATGTCTCCTTGTGA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_763
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CCGACCCTTATCACTTCCCC-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_2037
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GCGCGGCATCGGAATATG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_1511
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GGGGCAAGGCAAAGTTACAG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_3400
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------AACTGACACACTGGAGTGGC---------------------
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------------------------------------------------------------------------
