>input_sequence_41343
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----------AAACCCTACCTCCGTGGCCGCCTCCAAACCCTACCGCCACCCCTCGACCTCCCTCAGGCGAAGAAAGGGC
GAAAGCACCATGTACACGGCGAGGAAGAAGATCCAGAAGGACAAGGGCCTCGAGCCCTCCGAGTTCGAGGACTCCGTCGC
GCAGGTAGCCTGGAAGCCCTCTCGTCTCACGTCAGTGCTGTTGCGCGTGGTCTCTGCGCTCCGTGTTTCACCACCGTTGT
TTCGTGTTTGCAGGCATTCTTCGACCTGGAGAATGGCAGCCAGGAGCTCAAGAGCGACGTTAAAGACCTCTACATCAACG
CCGCCTTGTAAGTCATCAGCCAGTCTTAACCTTGGTTTTCGTTTCTGTTGAGTAGCAGTCCAAGTGGTAGCGAGGTGTGA
TGGTTTCTGGCTTGTGCTGCCTCGTATTGCAGCCAGATGGATGTTGCAGGGAACAGGAAGGCCGTGGTCATCCACGTGCC
GTACAGGCTCCGCAAGAACTTCAGGAAGATCCACGTCAGGCTTGTCAGGGAGCTCGAGAAGAAGTTCAGCGGCAAGGTTA
GTGAATTGCCATTAACCTTGTTAGAGTCCTTTCCTTTGAGAATAGTGTGATCT-----AGTAATCAGTATTTCACATAGG
AGTAAGT-GGAGTAAGTTTGCTAGTCAGAATGATTGCTTATGTGTTGTAGATTTCGTAGACAAAGATGGTATTCCCCTAC
AGCTATAGCAGT---------------AGAGCATGCCTGTATGCTCCTCCTGAATCCTGTTATGTTTTGCACTACACTCT
GCTGCTACAAATACAATGCGATACCTCTGTGTGTGGAATGTTCACCAGTATGCTTCCTAGTCTACAACTAGGATGCTGTA
CTCTTATGGGCATGTGTTTTCCGTTTGGAAGAGTTGTATTTACTCAAATGCTGTGGCAGTTATTTCTTATTTCCTTCTTT
-TCAGGTGCCATTTACAATGTTTGTCATC-TTTTATTCAGTGTTACTGGTTTAAAGTCGAATTTGGTTGTTTGTCTAACG
TTATTGCAGAGTAATTATTGTATTCATGTCACTTCCCTCTAATTGCCAAAT-ATACTCTGTTCGAGAAATTTCTTCATAG
TTGTGTCCTTTGCCTAGCAAAATGCCAAAACCCCCCAATTACGCTGAAGCAAATGTTAGCCATTGTCCTGTTTGTTCCGT
GCTTGTTGAAATGTGTGGTTGACTATGACTCGATGTAGGATGTTGTTATTGTTGCAACAAGGCGGATTGTGAGGCCACCC
AAGAAGGGTTCTGCTGTTGTTCGCCCTCGTACCAGGACTTTGACCGCTGTTCATGATGGTCTTTTGGAGGATGTTGTGTA
CCCAGCTGAGATTGTGGGGAAACGTGTCAGATATCGCCTAGATGGCTCGAAGATCATCAAGGTAAGATTTGACGACTGCA
TTGATATAGCTGATTCTTGTCTAGACAATTTTTGATTAGCCTGAACTTT-ACATCTCTATTTCACCCTTGTAATTTCTTC
CGAATTGATCAACATTGACACTTTTGATCCAAACAATTTTTTGTTGGTGCCCTGTTTATTTTACTGGTGTTGTTGCAGAT
CTTCTTGGACCCAAAGGAACGCAACAACACAGAGTACAAATTGGATACCTTCACTGCAGTGTACCGCAGGCTTTGTGGCA
AGGATGTTGTGTACGAGTACCCGGTTGCCGAAACTGCTTGAAGATCCATCTTAATTTGCATATTGGCCCTCTTGTTCATG
TATTGAATTTGCGACGGCTTGCTTGAGCTCGTTGTTGCTCGGATCATGTCTTCGAAAAATCAAAATTATAGCTGTGATGC
CAAACCTAAATATTTGCTAGTTCGAGATGGTAATGAGTGAAAAGCGTTGAATTTTGAGCTTTAAAATAAGTTTCACTTGT
TCTAT-TATGTAACGAGTAAA-----------------------------------------------------------
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>chr1B_1_TraesCS1B01G146100
TTGGA---------------------------------------------------------------------------
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------------------------------------------------GCCGGGGTTGGAGAAGAAGTCACTGAAGGGAT
CCATGGCTATGGCGGCTGATGAGGACAATAGCAGCTAGGGCGTCAGGTGGGGGTGTGGTTCAGGCGTGAGCAGCGGAAAG
AGGTCACGGGAAAGAGAAAACTGATACCATTTAGGTTTGAATAATTGGGAATATGCAGCGCATTGTATTGATCCATAGGG
CAATTACATATATACACAAAAATACTTGACCTCCAAGACTCTATCTCTATGTACAAGGAAAGATATCAAGAGGAGGCAAG
TATGGAAGTAAACATCCTACGTGACCGC-TGTGATACAATGCCTATATTCCTACAAGGATGATCTCCACTTCATGCCACC
CACTGGTGTCAGCATGCCTTCTTCCAAGCTCGTTGTGTCCACTGTGCTCCCTCCATCCTCGACCACGCGTGACGTCGTTG
CCACAACATCAACAACCACCATATGCTTGACCACCGTCCGTAAGGGGTGTGTACTCGATGAAGCGTTAGCTACATCCTCC
CAAGTGGTCATACTGGCTTCCTTTACCACTTGCTCAATGGCAGCAGCTTCCATGATGACATCTAAGGTCATTCACGTGCC
TGCCGCTACTCTTGGCCCGTCCTCATCTGGCGACATTGACATCGTTATTAGCCTGCCCGTGACCCGTCACCCATGAAAAA
TAAATAATTAGCAATTAATCTCTTATCTTTGTTATAATCCAATAAAGCAAATCAATCATGGGCACGTACCTATTTTGC--
---------------------------------------------------------------TTGTTTAATTATATCTG
TTTTGTATCATAATTTATCCCGTAT-GTCCTCCTATATATTGTGTTAAAAATAATAATATTTGGATCATGCGGCAACGCA
TGGGCACATACACAGTCCATTTTTTTTT---ATAAAGATCGAAATTGGGCCAGTGCGACAGGCATTCTGTACCGAGCATG
GCCCAGCCCACAA-----------------ACATTTTGGGATCCCCTTATAGACCTATAAAATCGTATCCCACTACTCGC
GGCCGCCTCCAAACCCTACCTCCGTGGCCGCCTCCAAACCCTACCGCCACCCCTCGACCTCCCTCAGGCGAAGAAAGGGC
GAAAGCACCATGTACACGGCGAGGAAGAAGATCCAGAAGGACAAGGGCCTCGAGCCCTCCGAGTTCGAGGACTCCGTCGC
GCAGGTAGCCTGGAAGCCCTCTCGTCTCACGTCAGTGCTGTTGCGCGTGGTCTCTGCGCTCCGTGTTTCACCACCGTTGT
TTCGTGTTTGCAGGCATTCTTCGACCTGGAGAATGGCAGCCAGGAGCTCAAGAGCGACGTTAAAGACCTCTACATCAACG
CCGCCTTGTAAGTCATCAGCCAGTCTTAACCTTGGTTTTCGTTTCTGTTGAGTAGCAGTCCAAGTGGTAGCGAGGTGTGA
TGGTTTCTGGCTTGTGCTGCCTCGTATTGCAGCCAGATGGATGTTGCAGGGAACAGGAAGGCCGTGGTCATCCACGTGCC
GTACAGGCTCCGCAAGAACTTCAGGAAGATCCACGTCAGGCTTGTCAGGGAGCTCGAGAAGAAGTTCAGCGGCAAGGTTA
GTGAATTGCCATTAACCTTGTTAGAGTCCTTTCCTTTGAGAATAGTGTGATCT-----AGTAATCAGTATTTCACATAGG
AGTAAGT-GGAGTAAGTTTGCTAGTCAGAATGATTGCTTATGTGTTGTAGATTTCGTAGACAAAGATGGTATTCCCCTAC
AGCTATAGCAGT---------------AGAGCATGCCTGTATGCTCCTCCTGAATCCTGTTATGTTTTGCACTACACTCT
GCTGCTACAAATACAATGCGATACCTCTGTGTGTGGAATGTTCACCAGTATGCTTCCTAGTCTACAACTAGGATGCTGTA
CTCTTATGGGCATGTGTTTTCCGTTTGGAAGAGTTGTATTTACTCAAATGCTGTGGCAGTTATTTCTTATTTCCTTCTTT
-TCAGGTGCCATTTACAATGTTTGTCATC-TTTTATTCAGTGTTACTGGTTTAAAGTCGAATTTGGTTGTTTGTCTAACG
TTATTGCAGAGTAATTATTGTATTCATGTCACTTCCCTCTAATTGCCAAAT-ATACTCTGTTCGAGAAATTTCTTCATAG
TTGTGTCCTTTGCCTAGCAAAATGCCAAAACCCCCCAATTACGCTGAAGCAAATGTTAGCCATTGTCCTGTTTGTTCCGT
GCTTGTTGAAATGTGTGGTTGACTATGACTCGATGTAGGATGTTGTTATTGTTGCAACAAGGCGGATTGTGAGGCCACCC
AAGAAGGGTTCTGCTGTTGTTCGCCCTCGTACCAGGACTTTGACCGCTGTTCATGATGGTCTTTTGGAGGATGTTGTGTA
CCCAGCTGAGATTGTGGGGAAACGTGTCAGATATCGCCTAGATGGCTCGAAGATCATCAAGGTAAGATTTGACGACTGCA
TTGATATAGCTGATTCTTGTCTAGACAATTTTTGATTAGCCTGAACTTT-ACATCTCTATTTCACCCTTGTAATTTCTTC
CGAATTGATCAACATTGACACTTTTGATCCAAACAATTTTTTGTTGGTGCCCTGTTTATTTTACTGGTGTTGTTGCAGAT
CTTCTTGGACCCAAAGGAACGCAACAACACAGAGTACAAATTGGATACCTTCACTGCAGTGTACCGCAGGCTTTGTGGCA
AGGATGTTGTGTACGAGTACCCGGTTGCCGAAACTGCTTGAAGATCCATCTTAATTTGCATATTGGCCCTCTTGTTCATG
TATTGAATTTGCGACGGCTTGCTTGAGCTCGTTGTTGCTCGGATCATGTCTTCGAAAAATCAAAATTATAGCTGTGATGC
CAAACCTAAATATTTGCTAGTTCGAGATGGTAATGAGTGAAAAGCGTTGAATTTTGAGCTTTAAAATAAGTTTCACTTGT
TCTAT-TATGTAACGAGTAAACACTGAG----------------------------------------------------
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------------------------TTATTCTCCTTGAAAATTCAGGCCCCTGAAATTGTAGGGGC-----------TGAA
CCCTTGAAATGTCCCAGCCTCAAATCTGGAAAGCTTGTAGGGGAACGGATACGTCTTGCTGTGGTGGTTGCCTCTGACCT
CCATTGTGTCCACCGCTTTCTACCCCGTGCTGCCGCCCCAGCAACCAGTGGTGTTGGGGATGCACGAAAGCAGTAGCAGC
TGCTCCCTGGGCTGTGTCTCCGCCATTGATCCCGGTCGTGACAGAAACAGCAACCGGAGCCAGCCAGCAACACTGAGCGA
GGTGGGCAGCTGCACTGCGGTGGTGTTGGGCAAGGTTTGGACGACGGTGGTAGGCAGCTGCGCTGTGTGGTGCTGGGCGT
CTGGACGACGAGGTAGGCGTTGGGTAGAACACGTGCAGCGCTGGCCGAGATCAGGCGACGACGCTAGGTTAGGACCCCA-
---------------------GCGTTGTGCCGGGTGTGG----TCTCATCAAACGGGTGGTGGATTAAGAGATGGAAGGG
GGAAGGAGAGGAAGAGAGGCTTTTGTGGCCTGGACTGTGTCTCTAGGGATTT--------GAGCATCGACAACCGTGTAA
GTCAAATCTGACTT----------TGCGAACGTGTCTGGTCAAATAACCTATACTATCCCAATCTTGATCGGAGTTTTTC
ACTATCTCCGTGCCCGGCT------ACATGGATGGAAGCCGCAACTCCGGTTCCTGCGACTCCTCCATGCCGGCCTCCGC
ATGCATCTCCGCTTCGACCTCGTGAAAGAGCGCGTCAGTCGCCACTCGTTCCTGCCA------------GTTGGCCTCCA
TACATGCCTCATTCCGGATAGACTCTAGGATGGCCTGCTGCTTCGCCATCTCGGTCGCTTGGGCAACCACGAACTCCGCC
TTGTCCTTCATGCTGAAGCCCGGAGCCGGAGCCGACGCCAACTACTCCTCTGGTTGCTCCGCCTCTGCATTCCCAACCCC
GAGGCTCCTCTGTTTTTTTTGCAAAATACAGTGGCCCGTCCGGTGTTATG
>chr2D_1
TAGGATTGAATAATTGGGAATATGCAGCGCATTGTATTGATCCATAGGGCAATTACATATATACACAAGAATACTTAACC
TCCAAGATTCCAGCAATGCTACGGTAGAAGGTGGCATCAGACACGGGAGCACCGGAGGTGGCTGAGACCTTGGATTTCGT
GTCAACAGGCGTCGAAGCAGGCTTGCAATTAGACATGGAAGCTCGATCAAGAAGCTCCTCGGCATACCGTTCTTGCGAGA
GAAAGAAACCCGAAGCTGTGTGCTGGAGGGCTACACCGAGAAAAAATGGAGCGGTCCAAGATCCTTCATCTTGAACTCGG
CACTGAGAGCGGTGATGATCGACCGAAGGAACATCGGTGAGAAAGCCGTGAGCACAATGTCATCAACATATAGGAGCAAG
TAAGCCATGTCCGAACCGCGACGACAGACAAATAGGGAATTGTCGGATAGTGTCGCGGAGAAACCAAGCCGGCGAAGAAA
ATCTCCAATGCGGGTATACCAGGCACGGGGAGCCTGTTTAAGTCCATAGAGAGACTTAGACAATAAGCACACATGCTCCG
GGTGATCCGTGTCGACAAAACCTGTAGGCTGAGCACAATAAACTCGTTCCTGTAGCTCACCATGAAGAAAAGCATTGGAG
ACATCTAACTGATGGACTGGCCAATGACGAGAGGCGGCAAGATGGAGTAAAGTGCGGACAATAGCAGGCTTCACAACGGG
GCTGAATGTCTCTCCAAAGTCAACACCGACGCACTGAGTGAATCCACGGACAACCCAACGAGCCTTGTAGCGATCGAGAG
AACCATTGGGTTTGAGCTTCTGACGGAAAACCCACTTGCCGGTGACGATGTTGGTACCACGAGGGCGAGGTACAAGGGTC
CAAGTGCGGTTGGCCAGTAGATCGAATTCCTCCTTCATCGCGGTACCCCAGGAAGGATCTCGAAGAGCTGCGCGAGCTGA
CACAGGCAGCGGTGACAATGCAACAGAGGCCACATGGGCCTGCTCATAGTCGTCATAGCGTCATGAGGGCTGAACAATGC
CCTGTCGAGCACGAGTGGCCATGGTGTGCACAGACACGGCAGAGGGTCGCAACCACGGAGCACCATGAGTAACACATGGT
GCGAGCGCCGATGAGGATGTCGAGGCGCTGAGGTCGTCATTAGAGGCGGTCGCATCAACAACCGGCGTCGCCATGGCAGC
TGAAGTAGGCGAAGAAATGCCAGTCGTGGCAGCCGAAACACCAGGCGAAACAGCTGCCGTAGCTGCCGAATTGGCTGCAG
GGGCTACCGAACCAGCGGCCCTGGCAGCCAAACGTGGCGATGCTGGCGAGGGAGCCACGGACATGGCAGCGGACGATGAC
GACATTGGGGGCGCCCAAGGAGGTGAAGTAGAGGGCGCCCGAGGAGTCGACGAAGACGGCGCCTGAGGAGGTGAAGTAGA
GGGCGCCTGAGGAGTCGCCGAAGACGGCGCCCGAGGTGGTGACGGGGTGACCATAGCATGGCAGCCGGCCAGTGAGACCC
GGCCTGGAGTGGCTGGGGCTGGCCGAGGTCCAGGCGGGCCGGCGGCCATGGACGGGAGCACCATGCTCTCAATCGGAAGG
AGCACCTGGTCGGCTGGCGTTGTAGATGATTCCTCCTGTTCCCTGAAAGCAAAAACACGCTCGTCGAAGATGACATGGCG
TGATGTTAGTATGCGATGGGAGGCGGGATCATAACATCGATAGCCGCGATGGTCAGGAGGGTAGCCTAAGAAAACACAAG
CAACAGATCGAGGTGCCAGCTTATGTTGAGCGGTGGCAGAGGTGTTAGGATAACACAGACAACCAAAAACACAAAGGTGT
TGATACTCAGGAGGAAAACCAAAGACACTTTTTATTGGAGATGTCCATACATCGCAATGCATAAGAGCAAAAGGGAAACT
AGCCTACGAATCTGATTGTTTGAAAGGTAACCTAACATGCTTGCCCAACCTACAAGCATGACATGTTGTAAACATAGCTT
TATTACAGGAAAACTCAAAAGACGATAATGTTTTGGAGAGAGCAGCATGTCCCGGATGTCCAAGCCGCTGGTGCCAAAGA
TCGGAGGTCTCAGCAAGGAGAGCTTGAGACCCGGATGCAAGTGGATAAAGTTCATCGGGGCTGTCACATCGCAGAATCAC
TCGTCGTGTGTGAAGGTCCTTGACAGAAAAACCAAACATGTCAAACTCAACAGTAATGGGATTTTCACGAGTAAGGCGAT
GAACGGAAATCAAATTTTTAATGATATTAGGAGTAATGACAACATTACGAAGATGAATAGGAAAAGAAGATGTGGGAAAA
GAAACGTCACCGATGTGGGTGATCGGGAGAGAATCCCCATTACCGATGATGACACGGGTGGAAGTAGAACATGGTTGAGA
GTGAGAAAGGATACTGGGATGGTTCGCCATATGCGAGGTAGCACCGGTGTCAAGGAACCAGTCAGCCCCGCTGCCGCCAC
CATTGATGGAGAGATTGTTGAGGGCGGCGTGTAGTTGCTTTTGGTCCCAAGCCGAAGGTTGATGAAGAGACGGGACCGGC
GCATAGCCAGGGTAAATGGGACCAGAGGGGTAGCAGTGCGGGGCCACCTGCCCTAGCTGGGCCGCATATGCATGCGGCGA
AGAGGCGCCGGGTCGAGGCTCGAGCAGGCCGGCACCGGGCGCACGCCAGTTCGGGGGCCAGGCTGCGAATATCCCCAACA
GGGGGTAGCCCCCGAGAGGCCATGCTGGGGTGTTGCGCGCGTCCGGAAGAGGAGTTGTCGTGCCAGTAGGGCCGGCAGGA
GGAGCGGACTGCTTCTTCTTCTTGCCGCGGTTGCGGCCGCCATTGGGAGAGGGCGCAGCAGGGGCGCCGTGGGCGACTGG
ACGTGGTGGAGTCGGAGCAGCAGTGTCCGGGCGGGACTGACCGACAATGAGAGCCGTCAGCCGGGTGTGGTGACCGCCAC
GGGAGAGGCGGCGCTCCTCCTGAAGAATAACACCACGGGCCCACGCGAAGGTGAGGCCGGTGGGGTTGACGGTGAGCGCC
GCAATGCAATGGCCGAAGTCGTCGTTCAACCCGTTGATAAGAGCCAGCAGCATGTCTTGGTCAGAGACCGGTGAGCCGAC
ATCCCGAAGAGTGTCGAAGAGACACTTGAGATGGCTGCAGAAGGCGGTGACGGAGAGGTCACCCTGAACGATGTTGTGAA
ACTCCCGCTTGGCGAAGATGGCGCGCTGTAGACGGTTGTCGAGGAAGAGCTCGGAGATGACCGTCCATGCGTTGGCGGCG
GTGTCGGAGGGCCTGATGATGATGTGCAGGATGTCAGGAGAGACGGTGGTGTAGAGCCACGAGACGATGCACTGATCAAT
CTGGGTCCACTCAACATCAGCGAACATCATTAGAGCATTGGTCGACCCATCAACATGATTGACGAGACCGAGCTTGCGGA
AGGTGAGGTGGAAAAAAGTTTGCCAGATCGAGAAGTTGGACTCATCCAAGCTAAGGGTGACGGGAACATGGCTGCGGATG
TTGATGAGTTGGACGGCGGTGGCGCTAGGGGCGGCTGGCTGAGTGGAGTCAGCGAAGGGGTTGGAGTTGGAGGTGGAGCC
TGATGGGGTGGAGTGGCTGGAGGAGGGGTTGGAGGCGAAGGGATTGGAGCCGGGGTTGGAGAAGAAGTCACCGAAGGGAT
CCATGGCTATGGCGGCTGATGAGGACAGCAGCAGCTAGGGCGTCAGGTGGGGGTGTGGTTCAGGCGTGAGCAGCGGAAAG
AGGTCACGAGAAAGAGAAAACTGATACCATGTAGGATTGAATAATTGGGAATATGCAGCGCATTGTATTGATCCATAGGG
CAATTACATATATACACAAGAATACTTGACCTCCAAGACTCTATCTCTATGTACAAGGAAAGATATCAAGAGGAGGCAAG
TATGGAAGTAAACATCCTACGTGATCGCATGTGATACAATGCCTATATTCCTACA-------------------------
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>chr1D_330
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-----------------------------------------------------CAAGGATGATCTCCACTTCGTGCCACC
CACTAGTGTCAGCATGCCTTCTTCCAAGCTCGTCGTGTCCACTGTGCTCTCTCCATCCTCGACCAAGCGTGACGTCGTTG
CCACGACATCGACAACCACCATATGCTTGACCACCGTCCATAAGGGGTGTGTACTCGATGAAGCGTTAGCTACATCCTCC
CTGATGGCCATACTGGCTTCCTTGACCACTGGCTCAATGGCAGCAACTTCCACGATGACATCTAAGGTCATTCACGTGCC
TGCCGCTACTCCTTGTCCGTCCTCATCTGGCGACACTAACATCGTCATTAGCCTGCCCGTCACCCGTCACCCATCAAAAA
TAAATAATTAGCAATTAATCTCTTATCTTAGT--TAATCCAATAAAGCAAATCAATCATGGGCACATTGT--------CT
GTTTAAGCAATGACAGAAA-ATCTATGCTTTAAATATAATTTTTTTGCGGGCAAAATATAATTTTGTTTTATTCTATCTG
TTTTGCATCATAATTTATCCCGTATAGTCCTCCTATATATTGTGTTAATAATAATAATATTTGGATCATGCGGCAACGCC
TGGGCACATACATAGTCCAATTTTTTTGTTGATAAAGATCGAAATTGGGCTAGTGCGACAGGCCTTCTGTACCGAGCATG
GCCCAGCCCACAA-----------------A------------------TAGACCTATAAAATCGTATCCCACTACTCGC
GGCCGCCTCCAAACCCTACCTCCGTGGCCGCC----------------ACCCCTCGACA-CCCTCAGGCGAAGAAAGGGC
GAAAGCACCATGTACACGGCGAGGAAGAAGATCCAGAAGGACAAGGGCCTCGAGCCCTCTGAGTTCGAGGACTCCGTCGC
GCAGGTAGCTAGGAAGCCCTCTCGTCTCACGTCACTGCTGTTGCGCGTGGTCTCTGCGCTCCGTGTTTCACCACCGCGGT
TTCGTGTTTGTAGGCATTCTTCGACCTGGAGAATGGCAGCCAGGAGCTCAAGAGCGACGTTAAAGACCTCTACATCAACG
CCGCCTTGTAAGTCATCGGCCAGTCTTAACCTTGGTTTTCGTTTCTGTTGAGTAGCAGTCCAAGTGGTAGCGAGGTGTGA
TGGTTTCTGGTTTGTGCTGCCTCGTGTTGCAGCCAGATGGATGTTGCAGGGAACAGGAAGGCCGTGGTCATCCACGTGCC
GTACAGGCTCCGCAAGAACTTCAGGAAGATCCACGTCAGGCTCGTCAGGGAGCTCGAGAAGAAGTTCAGCGGCAAGGTTA
GTGAATTGCCATTCACCTTGTTAGAATCCTTTCCTTTGAGAACAGTGTGATCTGGAGTAGTAATCAGTATTTTACATAGG
AATAAGTCGGAGTAAGTTCGCTAGTCCGAAGGATTGCTTATGTGTTGTAGATTTCGTAGACAAAGATGGTATTCCCCTAC
GGCTATAGCAGTATACTACTTTACCAGAGAGCATGCCTGTATGCTCCTCCTGAATCCTGTTATGTTTTGCACTACACTCT
GCTGCTACAAATACAATGCGATACCTCTGTGTGTGGAATGTTCACCAGTATGCT---------ACAACCAGGATGCTGTA
CTCTTATGGGCATGTGTTTTCCGTTTGAAAGAGTTGTATTTACTCAAATGCTGTGGCAGTTATTTCTTATTTCCTTCTTT
GTCAGGTGCCATTTACAATGTTTGTCATC-TTTTATTCAATGTTACTGGTTTAAAGTCGAATTTGGTTGTTTGTCTAACG
TTATTGCAGAGTAATTATTGTATTCACGTCACTTCCCTCTAATTGCCAAAT-ATACTCTGTTCGAGAAATTTCTTCATAG
TTGTGTCCTTCGCTTAGCAAAATGCCAAAAGCCCCCAATTACACTGAAGCAAATGTTAGCCATTGTCCCGTTTGTTCCGT
GCTTGTTGAAATGTGTGGTTGACTAGGAATCAATGTAGGATGTTGTTATTGTTGCAACAAGGCGGATTGTGAGGCCACCC
AAGAAGGGTTCTGCTGTTGTTCGCCCTCGTACCAGGACTTTGACCGCTGTTCATGATGGTCTTTTGGAGGATGTTGTGTA
CCCAGCTGAGATTGTGGGGAAACGTGTCAGATATCGCCTAGATGGCTCGAAGATCATTAAGGTAAGATTTGACCACTGCA
TTGATATAGCTGATTATTGTCTAGACAATTTTTGATTAGCCTGAACTTTTACATCTCTATTTCGCCCTTGTAATTCCTTC
CAAATTGATCAACATTGACACTTTTGATCCAAACAATTTTTTGTTGGTGCCCTGTTTATTTTACTGGTGTTGTTGCAGAT
CTTCTTGTACCCAAAGGAACGCAACAACACAGAGTACAAGTTGGATACCTTCACTGCAGTGTACCGCAGGCTTTGTGGCA
AGGATGTTGTGTACGAGTACCTGGTTGCCGAAACTGCTTGAAGATCCATCTTGATTTGCATATTGGCCCTCTTGTTCATG
TATTGAATTTGCGACGGCTTGCTTGAGCTTGTTGTTGCTCGGATCATGTATTCGAAAAATCAAAATTATAGCTGTGATGC
CAAACCTAAATATTTGCTAGTTCGAGATGGTAATGAGTGAAAAGTGTTGAATTTTGAGCTTTAAATTAAGTTGCACTTGT
TCTAT-TATGTGACGAGTAAACACTGAG----------------------------------------------------
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------------------------TTAGTCTCCTTGAAAATTCAGGCCCCTGAAATTGTAGGGGC-----------TGAA
CCCTTGAAATGTCCTAGCCTCTAACCTGGAAACCTTGTAAGGGAATGGATACCTCTTGAAGTGGTGGTTGCCTCTGACCT
CCATTGTGTCCACCGCTTTCTAC------------CCCCAGCAACCAGTGGTGTTGGGGATGCACGAAAGCACTAGCAGC
TGCTCCCTGGGCTGTGTGTCTGCCATTGAT----GTCGTGACAGAAACAGCAACCGGAGCCAGCCGGCAACACTGAGCGA
GGTGGGCAGCTGCACTGCGGTGGTGTTGGGCAAGGTGTGGACGACGGTGGTAGGCAGCTGCGCTGTGTGGTGC-------
------------------------------------AGCGCTGGCCGAGCTCAGGCGACGACGCTAGGTTAGGACCCCAG
CTCTAGGTCGTGATGGAGGCGGCGTTGTGCCGGGTGTG-AGGATCTCACCAAACGGGTGGTGGATTAAGAGATGGAAGGG
GGAAGGAGAGGAAGAGAGGCTTTTCTGGCCGGGACTGTGTCTCTAGGGATTTAATCTGGTCGGAG---------------
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-------CCATGCCCGGCTCCCGCTACATGGGCGGCAGCCACAGCTCCGGCTCCAGTGACTCCTCCACGTCGGCCTACGC
ATCCATCTCTGCTTCGACCTCGTCGAAGAGCGCGGCGGTCGCCACCCGTTCCTGCCCGATGAACCGCC----GGCCTTCA
CATAGGCCTCATTCTGGATAAACTTC-----GGCCTGCTGCTCCGCCATCTCGGTAGCTTGGGCGACCGCGAACTCCGCC
TCGTCCTTCATGCTGAAGCCCGGAGCCGGAGCCGGCGCCAGCTACTCCTCCGGTTGCTCCGCCTC---------------
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>chr1A_330
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-----------------------------------------------------CAAGGATGAACTCCACTTCGTGCCACC
CACTGGTATCAGCATGCCTTCTTCCAAGCTCGTCGTGTCCACTGTGCTCCCTCCATCCTCGACCGCGCGTGACGTCGTTG
CCACAACATCAACAACCACAATATGCTTGACCACCGTCTGTAAGGGGTGTGTACTCGATGAAGCGTTAGCTACATCCTCC
CCAGTGGTCATACTGGCTTCCTTGACCACTCGCTCAATGTCAGCAACTTCCACGATGATATCTAAGGTCATTCACATGCC
TGCCGCTACTCCTGGGCCGTCCTCGTCTGGCGACACTGACATCGTCATTAGCCTTCCCGTCACTTGTCACCCTTCAAAAA
TAAATAATTAGCAATTAATCTCTTATCTTTGT--TATTCCAATAAAGCAAATCAATCATGGGCACATACCTATTTTGCCT
GTTTAAGCAATGACAGAAATATCTATGCTTTATAAACAAAACATATATT-----------------TTTTATTCTACCTG
TTTTGCATCATAATTTATCCCGTATGGTCCTCCTATATATTGTGTTAAAAATAATAATATTTGGATCA-GCGGCAGCGCA
TGAGCACATACACAGTCCATTTTGTTT-TTGATAAAGATCAAAATTGGGCCAGTGCCACAGGCCTTCTGTACCGAGCGTG
GCCCAGCCCACAAACATTTTGGGATTCCTTA------------------TAGACCTATAAAATCGTATCCCACTACTCGC
GGCCGCCTCCAAACCCTACCTCCGTGGCCGCC----------------ACCCCTCGACCTCCCTCACGCGAAGAAAGGGC
GAAAGCACCATGTACACGGCGAGGAAGAAGATCCAGAAGGACAAGGGCCTCGAGCCCTCCGAGTTCGAGGACTCCGTCGC
GCAGGTAGCTAAGAAGCCCTCTAGTCTCACGTCACTGCTGTTGCGCGTGGTCTCTGCGCTCCGTGTTTCACCACCGCGGT
TTCGTGTTTGTAGGCATTCTTCGACCTGGAGAATGGCAGCCAGGAGCTCAAGAGCGACGTTAAAGACCTCTACATCAACG
CCGCCTTGTAAGTCATCAGCCAGTCTTAACCTTGGTTTTCGTTTCTGTTGAGTAGCAGTCCAAGTGGTAGCGAGGTGTGA
TGGTTTCTGGTTTGTGCTGCCTCGTGTTGCAGCCAGATGGATGTTACAGGGAACAGGAAGGCCGTAGTCATCCACGTGCC
GTACAGGCTCCGCAAGAACTTCAGGAAGATCCACGTCAGGCTTGTCAGGGAGCTCGAGAAGAAGTTCAGCGGCAAGGTTA
GTGAATTGCCATTCACCTTGTTAGATTCCTTTCCTTTGAGAACAGTGTGATATAC---AGTAATCAGTATTTCACATAGG
AGTAAGTTGGAGTAAGTTCGCTAGTCCGAAGGATTGCTTATGTGTTGTAGATTTCGTAGACAAAGATGGTATTCCCCTAC
AGCTATAGCAGTATACTGCTTTACCAGAGAGCATGCCTGTATGCTCCTCCTGAATCCTGTTATGTTTTGCACTACACTCT
GCTGCTAAAAGTACAATGCGATACCTCTGTGTGTGGAATGTTCACCATTATGCTTCCTAGACTACAACTAGGATGCTGTA
CTCTTATGGGCATGTGTTTTCCGTTTGGAAGAGTTGTATTTACTCGAATGCTGTGGCAGTTTTTTCTTATTTCCTTCTTT
GTCAGGTGCTATTTACAATGTTTGTCATCTTTTTATTCAATGTTACTGGTTTAAAGTCGAATTTGGTTGTTCGTCTAACG
TTATTGCAGAGTAATTATTGTATTCATGTCACTTCCCTGCAATTGCCAAATAATACTCTGTTCGAGAAATTTCTTCAT--
----GTCTTTCGCCTAGCAAAATGCCAAACCCCCCCAATTACGCTGAAGCAAATGTTAGCCATTGTCCCGTTTGTTCCGT
GCTTGTTGAAATGTGTGGTTGACTATGACTCAATGCAGGATGTTGTTATTGTTGCAACAAGGCGGATTGTGAGGCCACCC
AAGAAGGGTTCTGCTGTTGTTCGCCCTCGTACCAGAACTTTGACCGCTGTTCATGATGGTCTTTTGGAGGATGTTGTGTA
CCCAGCTGAGATTGTGGGGAAACGTGTCAGATATCGCCTAGATGGCTCGAAGATCATTAAGGTAAGATTTGACCACTGCA
TTGATATAGCTGATTATTGTCTAGACAATTTTTGATTAGCTTGAACTTTTACATCTCTATTTCACTCTTGTAATTTCTTC
TGAATTGATCAACATTGACGCTGTTGATCCAAACAATTTTTTGTTGGTGCGCTGTTTATTTTACTGGTGTTGTTGCAGAT
CTTCTTGGACCCGAAGGAACGCAACAACACAGAGTACAAGTTGGATACCTTCACTGCAGTGTACCGCAGGCTTTGTGGCA
AGGATGTTGTGTACGAGTACCCGGTTGCCGAAACTGCTTGAAGATCCATATTTATTTGCATATTGGCCCTCTTGTTCATG
TATTGAATTTGCGACGGCTTGCTTGAGCTCGTTGTTTCTCGGATCATGTATTCGAAAAATCAAAAATATAGCTGTGATGC
CAAACCTAAATATTTGCTAGTTCGAGATGGTAACGAGTGAAAAGTGTTGAATTTTGAGCTTTAAATTAAGTTGCACTTGT
TATATTTACGTGACGAGTGAACACTGAGTTAGGGCCTGTTCTGATCTCCTCCCACTCCATACTTCTAAAAACTTCTGCCT
GAAGGCAGCCCGAACGGATTAGCTTCACGAAGCTAAAATTCAGGAAGCTGCGATGGGCTGTAGTTCATTTTTTCGAAGCG
ATAGATTCCCAGCTTCCTGTTTTCGTGAATCTGAAGCTGTTTTCGTGAATCTGAAGCTGCTTGTTATTTACGGCCGAATT
GCCACCGCCAAGAAAAACGTTTCGCTCAACACCCCCTCGCTCGATCCCGCAGGTCAACCTGGTCGCACACAACTCCCTTC
CCCTCGCTTCTCTGTAGCCCTACCGCCGCCGCCACGCTCAGCAGCCCCCGTCGCCGGCCAAATCGTTGACTCAACTACAG
AACCGGCCGTCCCAGTCTATTTCCCGCCGGATCCCATCGTCTTCGCCGTCCGTCGCGCCTGGTGCAAGGAGCTGCAACCC
CATGGCTCGGAGGAGCCGGCCCCAACGCCATTGACGCCCAAGCGACGCTCCCAAGCCAGGAGTGGCACGAGGACTACCGC
ACCTCCAAGCATAAACTGCAAGGTGAGCTCGTCCCCTTCTCTTCTTCCCTATGGATTGGTGTCCTCGCATGTCCTCTGTT
CTGTACATCTGTGCAGTTTATTTTCAGAGTTGTATTTGTTGTGTGCAAATTCCTACAGTAGAACCTATTCTTTGTTGTGC
AAATCTGGAATATATGTGCAATTCTGGAATCATAAGCTTTAATGCATATTGCTATGAGGGTACTGCCATGAGTGCTAACC
TGTTGCATCATTCAGAAAAGTGAAATACAGTTTTGGGTATGCAGAAAATGTACTACTACTCTGAAGTATATGTGTGCATA
AGTTAATGCATATTTCTATGTGGGTACTGCCATGAGTGGTAATGTGTTACAATTTTCAGAAAAGTGAAATACAATTTTGG
CTATGCAGAAAATGTACTGCTATATGTTTGCAATTTATTATCATGAGTCTAGTGGTGTATGCGTGCAAATGTACTGCTAG
TTCAGATATTACATGCCCTTGGCTGTGTAGAAAAGTATAATTTTTGTATTTATCAAAGTGACATGCATTTTTTTAGAGAA
GTTTCAAGTATGGCTGGGGCTGCTGAATGGAGCGTTGAAAAACTCAGATTATGTGCGAGTTGTTTGCTGAGCAAGTGAAT
GCCGGAAATATAGCAGTACCTCGAGAGTGCGGCGGTGACCATTGGAATCCCTCTTCCGGCATACCTCCCCCCTCTAGTGC
GGCGGTGAAAGCCGCCATCAATGTTGATGAGATCGAAGATCTTGATTTGGATGATACTGAAGAACAAACATCTCAGGCAA
CACCTACTTCATCTAAAGTGAGGCTTGGGATCGTCATTCCGGAGAAGAACAAGAAACCAAAGACCGCACAAGTGATGTGT
GAGCAAGTTACAAGAATTGGTGACATTGCTGAGGCTTCTCACTCATCATTCCAGTCTTTCGTGAAGCAAGATAAGGCAAA
CTGTGTCACCTCGGTCATGGATGAAGTCATTGCTTGTGGTGCAACAATAGGTACCGATGAGTTCTTCATGGCTAGCGAGT
TGTTTATGAAGAGGGCACAAAGGGAGATGTTTCTTTACATTCCTCTTGAGTCTCGAAAGAGTTGGTTGCGTAGGAAGTAT
GACTTGAAGTATGGGAACTAGTTTACATGCCTACCATCTATGTGTGATGGCCATGTTTTATGCTGAACCTAGTGCTTGAT
ACCATTTCATCTTTTATGTTGAACCATCTTTTATGTTGTTGAAACATCTTTTATGTTGTTTAACCTATTGTTTGCTATTT
ACTAATGCATTTTGTGGAACCATTTGCTATTTATGAATGCATTGTGAACCAGCTCTATGTTTATGTTGTTAGACCTAGTG
TTTGCTATTTATGTATGTATTATGTATATGTTCTTGATCCAATTGGTTCTAACTTGTGTTTCATATGTTGACGGTTGTTT
ATTTGCAGATGTCATCGGATAGTGAAAGTGACGATGACACAAATTATGAAAGAAAGAAAGTTATGGTTCTCCAATATCAA
CATGATATGGCCATGCTTTATTCGGCTATGTCATCAATAGTTGGGAAGTATTGCAAAAGTTGGGTCATGAAGGCCGACCC
TAGGACATCTAGGTTGAGTGGTTTTGAATGGTTGCGAGAGACTATTGGCACACCCGAAGAGACGTACACAATGTTGAGAA
TGAATGCAAATGTGTTCTTTGATCTTCATGACAAGTTGGTGGCGGAGTATGGCCTCAAAGAAACATGTTTTGTTACCACT
TATGAGTCTCTTGCTATGTACTTGTGGACCTTGGGCGGTTGTGAATCAAACAGGAGAACCCAAAACCGTTTCAAACATGG
AGCAGATACAGTTCACCGTAAGTTCCATGAGGTTCTACAATGTGTGGTCAAGATGTCATCTCACAACATTAGGCCTCAAG
ACCCAAATTTTCACATCGTCCATGATAGGATTAAGCGTGACAAAAGGGCTTATTCTCATCTCAAAGATTTCATTGGTGCA
ATAGATGGAACACATATTAGGGCTTCTATTCCGGAAGGACCTTCAAAAATAAGGGTACATTGGAAGAACCGGTGCAACAA
CACAGAATGTGATGGCGGTATGTGACTTTGATATGCATTCCACCTATGCTTCAATTGGATAACCAGGTTCTATGCATGAT
ACAAGTGTGCTATTTCATGCAATTGAAAATGACAAGGCCACATTCCCACATCCTCCCAACGGTAAGTATTTCTTGTTGTT
GCAATTTATATAACATGTCCTTCAACTCACAATCATGTTTGTTGTCCATTTCTATAGGCAAGTATTACCTTGTAGACGCC
GGCTATCCTAATAGGGATGGCTATCTAGCACCATACAAAGGTGAACGCTATCACGTCCCCGACTTTCAACGAGGTGCACC
CCCAACTACTCCTGTAGAGAAGTTCAACCGTATCCGCTCCTCCAAGCGCAATACCATAGAGAGAACCTTTGGTGTGTGGA
AGATGAAATGGAAAATCTTGCTCAAGATGCCAAACTATTCGATTCAAACACAAAAGATGATAATTGCGGCTACCATGACA
CTACACAACTATGTCCACCTCCATGACAAAGAGGATATCCACTTTCTTCGGTGTCAGAGGGATCCAGATTATGTCCCAAC
TATTCCAGAGAGATACAAGAAGTATGTTATTGAGATACAAGAAGTATGTTATTCCTCCAAATGCATCGGATTCTTCAACA
CCGGCGGAAAGTGGTCCTAACATGGATTTGTTTAGACATGAACTAGCTACCGCCATTGATCTTAGTTGGTGAAGTAATCA
TGTTCATGTCTTTAGATGTGACACAATTTTGATTTGCAAACTTATATGCAAATGAAACTTCATGCCGGCTGTGTGTAGTT
CTCTGTACACCTCTTAGTTCAAAAAATACATTACAAAATAAGTCATGTACAGTTCAAAAATACATGGCGGCTGCAGGCCC
AGCTCTATGTACACTTCTACCTCTCTGTACACCTCTGGAGAAATCACACAAATTATCTAGTGTGAAAAAAGGCCAGCCAT
TCACCCCAGGAAGCAGGCCCAACTCGTTTATATCCTTTTTATTAGCCTGTGTGCAGTTTAGCCCGAAATGGGCTGCTTCC
AGCCGGCCCAAGGTGGCAAGAAGGTGGGCTTCAACGCCCCAACTAGGCTGCCAACTCACGCAGGCACTAGGAGAAGTTGC
CTCGCCTCCAGAATGGTTTGCGTAGCTCCACCTAAAGCGAGAAGTCGGGGCAGAAGCTGGATACGAGAAGTTTTGCTGAA
GCTAGCGTGTTTCAGAACAGGCCCTTAGTCTCCTTGAAAATTCAGGCCCCTGAAATTGTAGGGGTTGATGAACTGATGAA
CCCTTGAAATGTCCCAACCTCAAACCTGGAAAGCTTGTAGGGGAACGGATACCTCTTGGTGTGGTGGTTGCCTCTGACCT
CCATTGTGTCCACCGCTTTCTACCCCGTGCTGCCGCCCCAGCAACCAGTGGTGTTGGGGATGGACGAAAGCACT-GCAGC
TGCTCCCTGGGCTGTGTCCCCGCCATTGATCCCGGTCGTGTCCGAAACAGCAACTGGAGCCAGCCTGCAACACTGAGCGA
GGTGGGCACCTGTACTGCGGTGCTG-------------------------------------------------------
---GACGACGAGGTAGGCGTTGGGTAGAACACGTGCAACGCTGGCGGAGCTCAGGCGACGACGCTAGGTTAGGACCCCAG
CTCTAGGTCGTGATGGAGGAGGCGTTGTGCCGGGTGTGGAGGATCTCATCAAACAGGTGGTGGATTAAGAGATGGAAGGG
GAAAGGAGAGGAA-AGAGGCTTTTCTGGCCGGGACTGTCTCTAGGGATTTAAGGATTTAAGAGCATCTACAACCGCGTAA
AGCAAATCTGACCCTTCAAATGTCTGTGAACGTGTCCGGTCAAATAATCTATACTATCCTAATCCTGGTCGAAGTTGTTC
AATATCTCCGTGCCCGGCTCCGGCTAGGTGGGCGGTAGCCGCAACTCCGGCTCATGCGACTCCTCCACGTCGGGCTCCGC
ATCCATCTCCGCTTCGACCTCGTCGAAGAACGCGTCGGTCGCCACCTGTTCCTGCCGGATGAACTGCCGGTTGGCCTCCA
CATAGGACTCATTCTGGATAGACTCCAGGATGGCCTGCTGCTCCGCCATCTCGGCCGCTCGGGCGACCGCGAACTCTGCC
TCGTCCTTCATGTTGAAGCCCAGAGCCGGAGCCGGCGCCAACTACTCCTCCGGTTGCTTCGCCTC---------------
--------------------------------------------------
>SNPs
-S------------------------------------------------------------------------------
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-----------------------------------------------------------------------S--------
---------------------------SS---------------------------------------------------
--------S---------------------S----S--------------------------------------------
-------------------S------------------------------------------------------------
------------------------S-----------------------------------------------S-------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
-S---------------------S------S--------------S------S---------------------------
-----------S---S-------------------S---------S--------------S-------------S-----
--------------------------------SS-------------------------------S--------------
---------------------------------------------------------------------S---S------
-----S--------------------------------------------------------------------------
---------------------------S-----------------------------------S----------------
-------------------------------SSSSSSSSSSSSSSSSSS-------------------------------
--------------------------------SSSSSSSSSSSSSSSS--------------------------------
--------------------------------------------------------------------------------
---------SS-----------------------S-----------------------------------------SS--
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--------------S------------------------------------------------------
--------------------------------------------------------------------------------
-------------S-----------S----------------S-------------------------------------
------------------S-------S---S-------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------S-----------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S---------------S------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
----------------------------------------------------S---------------------------
-------------------------------------------------S------------------------------
--------------------------------------------S--------------------S------S-------
-----------S--------------------------------------------------------------------
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---------------------------S----------------------------------------------------
------------------------S---------------------------S-----S---------------------
------------------------------------------------------------------------S-------
-----------------------------------------------------------------S--------------
------------------------------------S------------------------------------SSSSSSS
SSS----------------------------------------------S------------------------------
--------------------------------------------------------------------------------
------------------------S-----S------------------------------------S-------S----
SS----------SS------------S---------S----------S-----------S----S--S---S----S---
-S-----------------------------SS--S--------------S----------------S-S----------
--S--------------------SS-----------S--------S----------S-----------------------
S-S-S---------S----------S----------------S---------------------S---S-----------
-S--------------------------------S---------------S--------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_4677
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-----------------GCCCAGCCCACAAACATTTT-------------------------------------------
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>reverse_5909
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--------------------------------------------------------------------TGTTTGTTCCGT
GCTTGTTGA-----------------------------------------------------------------------
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>forward_4958
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----------------------------------------------------------CTCCGTGTTTCACCACCGTT--
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>reverse_10619
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----------------------------------------------------------CTGTGGTGGTTGCCTCTGAC--
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--------------------------------------------------
