>input_sequence_41272
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ATGCAGGAGGCCTCGTCGTCTTCTCTCCCGGCGCTGAGCAGCGCCTACCAGCCTCTCCCGTCGCTCTACCTCG
GCTTCTTGGCGATATGGGCGGCGTCGGGGATCTCCTGGGCCTTCAGCTCATGGAGGAATCGGCACTTCCAGGTCTGTCGA
ATCCTGCCTTTTAATTTCAACAATTTTCTTCTTCTTCCAGAACT--ATATGAACTTTAAACAGAATTTTCAGTATGTAAA
CCCTGCCTTGGGCGTCTGATTAAATTGACAGGGGATATTGCTTTCGTAATTCCGT--TGTTGGTTAGTTTTATAATTTTG
TTTCTTTTTTACAACAGGCGAATAACCTTCAATGGATCCTGGCCTTGGTTCCCCTGATCAAAGCTTTGCAAATGGCACTC
TCGTTTCTGTTCTGGTGAGCAGTCTGATTCTTTTTTGG-ATCTTTTTTCCCTTTCATTTCACTAGG--------TTCAGG
TTGGCAACTTTCAAATCTG-AAAAAA-TGTGAACAAG-CCCCTGAAGCTGCTGCAGAAGGTCTGAATTTGGGTGGCGTGT
CTGCAGGTACTCGTGCGTACACCTTCACACATGCTCGCTGTGGATGTCGTTCGGCGTGTACGTGACGGGGATCCTCTTCC
AGACGGCCTCCTTCGTCTCCTTCATGCTCATCTCCCACGGTTACTGCATCATGTACGAGCGCCTCTCCATCAGGGAGAGA
CGCACGACTGCGGGGCTCGGATGCCTCCTCTACCTTAGCCTCATAGGCTATAAAGCCGCAGTCCCTTATTTCACCGTAAG
CCGTCTGTCTTCTTCTGCGATTTATTTGTTTGGGGATTCTATACAATTAGCTATCTAAGAAGCCAGATGATGAGAAACTG
TGCTCTGATTTTGGAACAGGGTTTTCTTCTGATGAACTACTTCGCGTCATTCTACATCATATTCCGCCGCACGTCGCAGT
GCCTGCTGGTTCTGCGTGAGCAGCTTAATTTCGTGGAGGAGGAAGACATCCATTCACTGCATGGGACACTCAACACCAAG
TACACAATGTTCAAGTAAGCAGTCCTTATTCCTGACCAACACTTACAGTATTTT----AC---TCTTAAAATAATAAC--
---TCATGTGCTTAGCTCCTTGTTTTCTTCTCTTCAGGAGATTTCAGGGTACAATGCAGGTGGCAGCAGTGGCATTCATC
ATGGTAACTATG------GACTGC-CATGCACGGCATTTTCTTATGGTACAAACAGTGACAATGTT---------TACTG
AACTGTGATAATGCCATTTGTGTGTTCAGGTGTACATGAGGGCTGATGATACGCCGGATAACTACTGGTTCCGCGTGTTG
GTACGCGAATGGGTGCAGTTCTGCATCTTCATGTACATTGGGTGAGTATCGATTATCGCCAGACAGGGTCGTTAAAATCA
AGTGAAATACCATCTTGAGCTGAAATGGGATATGAATTCCAAATATTTCAGGTGGAACTTCAGGATCCCTGAAGCATCAC
TCCACCTGCCGGTCATGCCCCTGATGAAGTCAAACTGGGAGATTACCATGCCACCCATTTACAGCGTGGTATGGTCACCT
AACCTCAGTTCATTTCTTTAGCATCTTGTGTTCTTGTGGTCTGAAAAGCTCGACTGAAATGCGCCGTGCTTACTGTAACG
ACACAGGAAATGGACGCAGCCGATTTCAGAGGACTCGTCTCGGACCAATGGCATGTTGGAGTGGTAGGCAACACTGCACA
TATTATTTCAGCTATTTATTCATCTTTTTTGTTCTAGAACGTTATGATCGCAGAGTTATTGCATTTGAATCTAACACCTG
GTGATACTGCAGAGGACTTCTCATGCCGACGCATGCTACTCTTCACAGCCGTTGCTGGTGCTAGTTCAGAATCCTAGCCC
GAAGGTCTCCCGTGCCGCCGTAGCTTCAGGTTTCAGTTGA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr3A_1_TraesCS3A01G269400
CCTGTTCCAGTCAAAGCGGCCTTCTTGAGACGTGGAATCAGTAGGCCGCCACTGCGCCAACTGCCCTGAAATCTGCTTCA
-------------------------------CACCCTTCAATGAATCGCATCGCAAGATAAAGAAAATACAAACCAAGTT
ATTTATGTGTTGACCCAGGATAG---------------------CCCATACATGAGCATGCGCGATATGCGGCCACGATC
CGCCGATACTACAGCGCTAGTTAATTCCGTAGGCAAGGCGTGAACCCAGATCACCAGGCGACTGATGCTGGCACGGTGCG
TGCCTTGCGAGTACTTTACCAAAATATTTCTTCGAGAATGGGTTCTTTAGCGTTTCCGGCCCTACAAATTCGTGACATGA
TCTTTCTTCGTTCCCTGTTATACAGGCCTGCAAGCTTTTTCTTCTCTCATTTCTACTAC---CTACTATTACGATCTCAT
ACCATA--------------------------------------------------------------------------
---------------------------------------------------------------------CTCTGGACCCT
ACATGTCAGTCCAAAGTCAAACCAAAGTGTATCATGATCGTCCTTGGGCCAAAGTCAAATTGCCTTGCCCCCCAAAAAAG
GTGTACTTGACACCCTTGGGCC-AAAGGAATGCACACGTACGCGTACAGATGTTTTTATTCCAGGCACAAGTCAACAACA
ACACCAAAGCGAAGAGAATAATTTTCGGCTCAAAAAGAAAGAAGAGAATAAA-TTTTGTTTAATTTGTGAGACACGAATA
GAGCCGTTGCCTTTAGTAGTATTTTCCCTCCAATAAGTAACCAACCCTAACTACTCCTACACTCCCATAACGCTTCTGGT
GAGAAAAAGAGGGAGCGCACGTACTCCC---CTTCCCCCAGACGCCAAACCCATTACCGCACCGTTGCCATGATAAAATC
AAATCCAAGCCCTGGCTATTTATCTATCTAT--CTACGCACACTGCTGCTCCAATCCATCATCACTAAATCTGTTCAAGC
CTCTGTGATTCGTC--CCTTCCCATCTTCGCCAAGATCTTCTTCGTGTTTCTCTGCATTGCCAGTGGTCGGTTGCCCGTG
CAAGAAGATGCAGGAGGCCTCGTCGTCTTCTCTCCCGGCGCTGAGCAGCGCCTACCAGCCTCTCCCGTCGCTCTACCTCG
GCTTCTTGGCGATATGGGCGGCGTCGGGGATCTCCTGGGCCTTCAGCTCATGGAGGAATCGGCACTTCCAGGTCTGTCGA
ATCCTGCCTTTTAATTTCAACAATTTTCTTCTTCTTCCAGAACT--ATATGAACTTTAAACAGAATTTTCAGTATGTAAA
CCCTGCCTTGGGCGTCTGATTAAATTGACAGGGGATATTGCTTTCGTAATTCCGT--TGTTGGTTAGTTTTATAATTTTG
TTTCTTTTTTACAACAGGCGAATAACCTTCAATGGATCCTGGCCTTGGTTCCCCTGATCAAAGCTTTGCAAATGGCACTC
TCGTTTCTGTTCTGGTGAGCAGTCTGATTCTTTTTTGG-ATCTTTTTTCCCTTTCATTTCACTAGG--------TTCAGG
TTGGCAACTTTCAAATCTG-AAAAAA-TGTGAACAAG-CCCCTGAAGCTGCTGCAGAAGGTCTGAATTTGGGTGGCGTGT
CTGCAGGTACTCGTGCGTACACCTTCACACATGCTCGCTGTGGATGTCGTTCGGCGTGTACGTGACGGGGATCCTCTTCC
AGACGGCCTCCTTCGTCTCCTTCATGCTCATCTCCCACGGTTACTGCATCATGTACGAGCGCCTCTCCATCAGGGAGAGA
CGCACGACTGCGGGGCTCGGATGCCTCCTCTACCTTAGCCTCATAGGCTATAAAGCCGCAGTCCCTTATTTCACCGTAAG
CCGTCTGTCTTCTTCTGCGATTTATTTGTTTGGGGATTCTATACAATTAGCTATCTAAGAAGCCAGATGATGAGAAACTG
TGCTCTGATTTTGGAACAGGGTTTTCTTCTGATGAACTACTTCGCGTCATTCTACATCATATTCCGCCGCACGTCGCAGT
GCCTGCTGGTTCTGCGTGAGCAGCTTAATTTCGTGGAGGAGGAAGACATCCATTCACTGCATGGGACACTCAACACCAAG
TACACAATGTTCAAGTAAGCAGTCCTTATTCCTGACCAACACTTACAGTATTTT----AC---TCTTAAAATAATAAC--
---TCATGTGCTTAGCTCCTTGTTTTCTTCTCTTCAGGAGATTTCAGGGTACAATGCAGGTGGCAGCAGTGGCATTCATC
ATGGTAACTATG------GACTGC-CATGCACGGCATTTTCTTATGGTACAAACAGTGACAATGTT---------TACTG
AACTGTGATAATGCCATTTGTGTGTTCAGGTGTACATGAGGGCTGATGATACGCCGGATAACTACTGGTTCCGCGTGTTG
GTACGCGAATGGGTGCAGTTCTGCATCTTCATGTACATTGGGTGAGTATCGATTATCGCCAGACAGGGTCGTTAAAATCA
AGTGAAATACCATCTTGAGCTGAAATGGGATATGAATTCCAAATATTTCAGGTGGAACTTCAGGATCCCTGAAGCATCAC
TCCACCTGCCGGTCATGCCCCTGATGAAGTCAAACTGGGAGATTACCATGCCACCCATTTACAGCGTGGTATGGTCACCT
AACCTCAGTTCATTTCTTTAGCATCTTGTGTTCTTGTGGTCTGAAAAGCTCGACTGAAATGCGCCGTGCTTACTGTAACG
ACACAGGAAATGGACGCAGCCGATTTCAGAGGACTCGTCTCGGACCAATGGCATGTTGGAGTGGTAGGCAACACTGCACA
TATTATTTCAGCTATTTATTCATCTTTTTTGTTCTAGAACGTTATGATCGCAGAGTTATTGCATTTGAATCTAACACCTG
GTGATACTGCAGAGGACTTCTCATGCCGACGCATGCTACTCTTCACAGCCGTTGCTGGTGCTAGTTCAGAATCCTAGCCC
GAAGGTCTCCCGTGCCGCCGTAGCTTCAGGTTTCAGTTGAAGGAGGACAAGCCAGGTTCATTTGTGAGGACCGGGAGATG
CAGAAGATGACATCGACCAACTGCCTGATCCGGAAACCGGTGATAGGACGGTTGGGTTGCAACAGAGAAATATTGGGCGC
CACGGCGCAGTAGCTCTCTGTTAGCACTAGGAAAGAA---------------------------TCTGCAGTTTTTCTGT
AGACTGACAAACAGAGATGCGTTCGCTTCTTCAGCGGTGAATCCACC-----TTTTTTGCATCCCAAAGTATATTTCGTT
CTTCTCCAAGTACAGCAGGATTTTTCACATGTGAAAGACACGATCCAAAATGAATGCGTAGCAATTCCATTTTTTCATGA
GATGGTGTGCAATACAATTAGAGCATCTACAGCGAGAGCCCCCGTTTCGGCACCAAACATCCGGCGGTTGGGCTCGGCAC
TGTCCGGACAGAAAACTTTGACCCAACAAGACCTGGCAAACTCAGCCCAAAAGTCCAGGCTGACCGGGCACC-CCCCAAT
GCCCAGCTCATATGTGGGTTGGATATAGGGGAGCTCGGATGCGTCCGACATGTCGGATCGGACAGGCAGGAACCATTCCA
AATCCATTAGAGATCAAAATCTTCATATGGCTAGTGCTTCACAATCGCCTTTGGACTGTTGATCGCCAGGCGGCAACTCG
AGCATCCCGAGTGTTGTGTTCTGTGTTGCCAGGAGGAGGAAGATTTAAATCACATGCTCCTCAGTTGCTCCTTCGCTAGA
GATTTGGTACAGCGTTCTCCTGCCTTGGCGTCTCCATAGGTTTACGCCGACCCCGGAGGAAAAAATTCAGGCCTGAGCAA
TGCAATTTTTGGTGGAAGACGTAGGAAGATAAACACTCTGGTTTGCCTTGTGTTACGCTGCATCTGGCTGGAACGAAACA
GCCGTGTTTTTGACAAGGTAGCAACTATGCCTTACATGGTTACACGATGCATAAATGAAGAATTCAAATTGTGGATGCGA
GCTAAGATAGGTGGGATAGCGAGAGATGTAAAG
>chr3B_1
CCTGTTCCAGTCAAAGCGGCCTTCTTGAGACGTGGAATCGGTAGGCCGCCACTGCACCAACTGCCCTGAAATCTGCTTCA
CAGGAGACGCTCTGCGACGTGCCCTGCTTCTCACCCTTCAATGAATCGCATCGCAAGATAAAGAAAAAACAAA-------
--------------CCATGGTGC---------------------CCTATACATGAGGATGCGCGATCTGCGGCCACGATC
CGCCGATATTACAGCGCTAGCTAATTCCGGCGGTAAGGCATG---------------------------------GTCCG
TGCCTTGCGAGTACTTCACCAAAATATTTCTTCGAGAACGGGTTCTTTAGCATTTCCTGCCCTACAAATTCGTGACATGA
TCTTTCTTCGTTCCCTGTTATACAGGCCTGCAAGCTTTTTCTTCTCTCATTTCTACCACCTACTACTATTACGATCGCAT
ACCATATCTTAATTTCTGTGTCGTGGTATACATATATTTTTCCGTAAATAAAG---------------------------
------------------------------------------------------------------TGACTCTTGACCCT
ACATGTCAGTTCAAAGTCAAACGAAAATGCATCATCTTGTGAAAGAAAAAGTGACCCTTGGGACC---------------
-------------------GCC-AAAGGAATGCACACGTACGCGCACATATGTTGTTGTTCCAGGCACAAGTCAACGAGG
ACACCAAAGAGAAGAGAATAATAAGCCCTGGTTTATATTAATTAATTAATTTCTTTTGTTTAATTAGTTGGACACGAATA
GAGCCGTTGCCTT---TAGTATTTTCCCTCCAATAAGCAACCAACCCTAACTACTCCTACACTCCCATAACGCTTCTGGT
GAGAAAAAAAGGGGTCGCACGTACTCCCCTTCTTCCCCGAGACGCCAAACCCATTACCGCACCGTTGCCATGATAAAATC
AAATCCAAGCCCTGTCTATTTATCTATCTATATCTACGCACACTGCTGCTCCAATCCATCGTCATC-AATCCGTTCAAGC
CTCTCGTGATTGAACTCCATCCCATTTTCGCCAAGATCTTCTTCGTGTTTCTCTGCATTGCCAGTGGTCGGTTGCCCGTG
CAAGAAGATGCAAGAGGCCTCGTCGTCTTCTCTCCCGGCGCTGAGCAGCGCCTACCAGCCTCTCCCGTCGCTCTACCTCG
GCTTCCTGGCGATATGGGCGGCGTCGGGGATCTCCTGGGCCTTCAGCTCTTGGAGGAATCGGCACTTCCAGGTCTGTTGA
ATCCTGCCGTTCAATTTCAACAACTTTTTTTTTCTGCCAGAACTATATATGAACTTTAGACAGAATTTTCAGTATGTAAA
CTCTGCTTTGGGCGTCTGATTAAATTGACAGAGACTATTGCATTCGTAATTCCGTTGTGTTGGTTAGTTTTATAATTTTG
CTTCGTTTTACGG-CAGGCGAATAACCTTCAGTGGATCCTGGCCTTGGTTCCCCTGATCAAAGCTTTGCAAATGGCACTC
TCGTTTCTGTTCTGGTGAGCAGTCCGATTCTTTTTGCATCTTTTC--------TCACTTCACAATG--------TTCAGT
TTGGCAACTTTGATCCCTGAAAAAAAATGTGAACAAGCCCCCTGAAGTTGCTGCAGAAGGTCTGAATTTGGGTGGCGTGT
ATGCAGGTACTCGTGCGTACACCTCCACACATGCTCGCTGTGGATGTCGTTCGGCGTGTACGTGACGGGGATCCTCTTCC
AGACGGCCTCCTTCGTCTCCTTCATGCTCATCTCGCACGGCTACTGCATCATGTACGAGCGCCTCTCCATCCGGGAGAGA
CGCACGACTGCGGGGCTCGGATGCCTCCTCTACCTTAGCCTCATCGGCTATAAAGCCGCAGTCCCTTATTTCACCGTAAG
CCATCTGTCTTCTTCTGCGATTTATTTGTTTGGGGATTCTGTACAATTAGCTATCCAAGAAGCCAGATGATCAGAAACTG
TGCTCTGATTTTGGA-CAGGGTTTTCTTCTGATGAACTACTTCGCGTCATTCTACATCATATTCCGCCGCACGTCGCAAT
GCCTGCTGGTTCTGCGCGAGCAGCTTAATTTCGTGGAGGAGGAAGACATCCATTCACTGCATGGGACACTCAACACCAAG
TACACAATGTTTAAGTAAGCGGTCCTTATTCCTGACGAACACTTGCAGTATTTTTTGTAC---TCTTAAAATAATAAC--
---GCATGTGCTTAGCTCCTTGTTTTCTTCTCTTCAGGAGATTTCAGGGTACAATGCAGGTGGCAGCAGTGGCATTCATC
ATGGTAACAATCAGCTTTGGCTGCGCATGCACACAGTTTTCTTATGGTACGATCAGAAATTGGTAAGAAGATGCATACTG
AACTGTGATGGTGCCATTTGTGACTTCAGGTGTACATGAGGGCTGATGATACGCCGGATAACTACTGGTTCCGCGTGTTG
GTACGCGAATGGGTGCAGTTCTGCATCTTCATGTACATTGGGTGAGTATAGATTATCGCCGGACAGGGTCGTTAGAAGCA
ACCGAAACACCATCTTGAGCTGAAATGTGACATGAATTCCAAATG-TCCAGGTGGAACTTCAGGATCCCTGAAGCATCAC
TCCACCTGCCGGTCATGCCCCTGATGAAGTCAAACTGGGAGATTGCAATGCCACCCATTTACAGCGTGGTATGGTCACCT
AACCTCACTTCATTTCTTTAGCATCTTGTGTTCTTATGGTCAGAAACACTCGACTGAAATGCGCCGTGCATACTGTAACG
ACACAGGAAATGGATGCAGCCGATTTCAGAGGGCTCGTCTCGGACCAATGGCATGTCGGAGTGGTAGGCAACACTGCACA
-ATTAATTCAGTTATTTGTTCATCTTTGT-----------GTTATGATCGCAGAGTTGTTGCATTTGAATCTAACACCCG
GTGATACTGCAGAGGACATCTCATGCCGACGCGTGCTACTCTTCACAGCCGTTGCTGGTGCTAGTTCAGAATCCTAGCCC
GAAGGTCTCCCGTGCCGCCGTAGCTTCAGGTTTCAGTTGAAGGAGGACAGACCAGGTTCATCTGTGAGGACCGGGAGATG
CAGAAGATGACATAGGCCAACTGCCTGATCCGGAAACCGGTGATAGGGCGGTTGGGTTGCAACAGAGAAATATTGGACTC
CACGGTGCAGTAGCTTCATGTTAGCACT---------------------------AGGAAAGAGTCTGCAGTTTTTCTGT
AGACTGACAAACAGAGATGCGTTCGCTTCTTCAGCGGTGAATCCACC-----TTTTTTGCATCCCAAAGTATATCTCGTT
CTTCTCCAAGTACAGCAAGATTTTTCACATGTGAAAGACACGATCCAAAATGAACGGCTAGCAATTCCATTTTTCATCCG
------GTGGTGTGCATTTAGAGCATCTATGGCCGGAG-CCCCATTTCCGCACCAAACGTCCGGTGGTCGGGCCCAACCA
CTGCCGGACAAAAAACTTTCACCACCCAAGACCTGACAAACTCAGTCCAAACGTCCAGGCTGACCGGGCACCTCCCCAAT
ACCCAGCTCATATGTGGGTTGGATATAGGGGCGTCTGGATGCGTCCGATATGTCGGGTCGGACAGGCCGGACCTATTTCA
AATCCA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr3D_1
CCTGTTCCAGTCAAAGCGGCCTTCTTGAGACGTGGAATCAGTAGGCCGCCACTGCGCCAACTGCCCTGAAATCTGCTTCA
CA-GAGACGCTCTGCGACGTGTCCTGCTTCACACCCTTCCATGAATCGCATCGCAAGATAAAGAAAAAACAAG-------
--------------CCAAGTTATTTATGTGTTGACCCTGGATGGCCCATACATGAGCATGCGCGATATGCGGCCACGATC
CGCCGATATTACAGCGCTAGTTAATTCCGGCGGTAAGGCATGCACCCAGATCACCAGGCGACTGACGCTGGCACGGTGCG
TGCCTT-CGAGTACTTTACCAAAACATTTCTTCGAGAATGCGTTCTTTAGCGTTTCCGGCCCTACAAATTCGTGACATGA
TCTTTCTCCGTCCCCTGTTATACAGGCCTGCAAGCTTTTTCTTTTCTCATTTCCACCAC---CTACTATTACGATCTCAT
ACCATATCTTAATTTCTGTGTCGTGGTA--CATATACTTTTCTTATACTTGTAGTACCCCTACGCAACAAGAACAATCGA
GCTGACTGCTTATTCGGGCTGTCAAATTTTGATAACGACGCACTTTTGCTACACCTTGATATGAACTGACTCTGGACCCT
ACATGTCAGTCCGAAGTCAAACCAAAGTGTAGCATGATCATCCTTGGGCCAAAGTCAAATTGCC-----CCCCAAAAAAG
GTGTCCCTCACGCCCTTGGGCCAAAAGGAATGCACACGTACGCGTACATATGTTTTTATTCCAGGCACAAGTCAACAACA
CCACCAAAGAGAAGAGAATAATTTTCGGCTATAAAAAAAGG-----TAATGATTTTTATTTAATTTGTGAGACACGAATA
GAGCCGTTGCCTT---TAGTATTTTCCCTCCAATAAGCAACCAACCCTAACTACTCCTACACTCCCATAACGCTTCTGGT
GAGAAAAAGAGGGGGCGCACGTACTCCC---CTTCCCCCAGACGCCAAACCCATTACCGCACCGTTGCCATGATAAAATC
AAATCCAAGCCCTGGCTATTTATCTATC--TATCTACGCACACTGCTGCTCCAATCCATCATCATC-AATCCGTTCAAGC
CTCTCGTGATTCATCTCCGTCCCATCTTCGCCAAGATCTTCTCCGTGTTTCTGTGCATTGCCAGTGGTCGGTTGCCCGTG
CAGGAAGATGCAGGAGGCCTCGTCGTCTTCTCTCCCGGCGCTGAGCAGCGCCTACCAGCCTCTCCCGTCGCTCTACCTCG
GCTTCTTGGCGATATGGGCGGCGTCGGGGATCTCCTGGGCCTTCAGCTCATGGAGGAATCGCCACTTCCAGGTCTGTTGA
ATCCTGCCGTTCAATTTCAACATTTTTTTCC-----CCAGAACT--GTATGAGCTTCAAGCAGAATTTTCAGTATGTACC
ACCTGCTTTGGGTGCCTGATTAAATTGAGAGGGATTTTTTTTTTCGTAATTCCGT--TGTTGGTTAGTTTCCTAATTTTG
TTTCTTTTTTACAACAGGCGAATAACCTTCAGTGGATCCTGGCCTTGGTTCCCCTGATCAAAGCTTTGCAAATGGCACTC
TCGTTTCTGTTCTGGTGAGCAGTCTGATTCTTTTTTTATATTTTGTTTCCCTTTCACTTCACTAGGTTCAGTACTTCAGT
TTGGCACCTTTCATCCCTGAAAAAAA-TGTGAACAAG-CCCCTGATGTTGTTGCCGAAGGTCTGAATTTGGGTGCCGCGC
ATGCAGGTACTCGTGCGTACACCTTCACACATGCTCGCTGTGGATGTCGTTCGGCGTGTACGTGACGGGGATCCTCTTCC
AGACGGCCTCCTTCGTCTCCTTCATGCTCATCTCCCACGGTTACTGCATCATGTACGAGCGCCTCTCCATCAGGGAGAGA
CGCACAACTGCGGGGCTCGGATGCCTCCTCTACCTTAGCCTCATCGGCTATAAAGCCGCAGTCCCTTATTTCACCGTAAG
CCATCTGTCTTCTTCCGAGA-TTATTTGTTTGGGGATTCTATACAATTAGCTATCTAAGAAGCCAGATGATCAGAAACTG
TGCTCTGATTTTGGAACAGGGTTTTCTTCTGATGAACTACTTCGCGTCATTCTACATCATATTCCGCCGCACGTCGCAAT
GCCTGCTGGTTCTGCGCGAGCAGCTTAATTTCGTGGAGGAGGAAGACATCCATTCACTGCATGGGACACTCAACACCAAG
TACACAATGTTTAAGTAAGCAGTCCTTATTCCTGACGAACACTTAAAGTAATTT----ACTCTTCTTAAAATAATAAC--
---TCATGTGCTTAGCTCCTTGTTTTCTTCTCTTCAGGAGATTTCAGGGTACAATGCAGGTGGCAGCAGTGGCATTCATC
ATGGTAACAATCAGCTTTGACTGCGCATGCACACCGTTTTCTTATGGTACATTCAGAGTTTGGTAAGACGATGCATACTG
AACTGTGATGATGCCATTTGTGACTTCAGGTGTACATGAGGGCTGATGATACGCCGGATAACTACTGGTTCCGTGTGTTG
GTACGCGAATGGGTGCAGTTCTGCATCTTCATGTATATTGGGTGAGTATAGATTATCGCCGGACAGGGTCGTTAGAAGGA
ACCGAAACACCATCTTGAGCTGAAATTTGACATGAATTCCAAATG-TTCAGGTGGAACTTCAGGATCCCTGAAGCATCAC
TCCACCTGCCGGTCATGCCCCTGATGAAGTCGAACTGGGAGATTACCATGCCACCCATTTACAGCGTGGTATGGTCACCT
AACCTCAGTTCATTTCTTTAGCATCTTGTGTTCTTGTGGTCTGAAAAACTCGACTGAAATGCGCCGTGCTTACTGTAACA
ACACAGGAAATGGACGCAGCCGATTTCAGAGGCCTCGTCTCGGACCAATGGCATGTTGGAGTGGTAGGCAACACTGCACA
-ATTAATTCAGTTATTTGTTCATCTTTGT-----------GTTATGATCGCAGAGTTGTTGCATTTGAATCTAACACCTG
GTGATACTGCAGAGGACTTCTCATGCCGAACCGTGCTATTCTTCACAGCCGTTGCTGGTGCTAGTTCAGAATCCTAGCCC
GAAGGTCTCCCGTGCCGCCGTAGCTTCAGGTTTCAGTTGAAGGAGGAGAAACCAGGTTCATTTCTGAAGACCGGGAGATG
CAGAAGATGACATCGACCTACTGCCTGATCCGGAAACCGGTGATAGCACGGTTGGGTTGCAACGGAGAAATATTGGACGC
CACGGTGCAGTAGCTTCTTGTTAGCACTAGGAAAGGGTCTGACCCTCAAAAAAAAAGGAAAGGGTCTGCAGTTTTTCTGT
ACACTGACAAACAGAGATGCGTTCGCTTCTTCAGCGGTGAACGAATCCGCCTTTTTTTGCATCCCAAAGTATATTTCGTT
CTTCTCCAAGTACAGCACGATTTTTCACATGTGAAAGACACGATCCAAAATGAATGAGTGGCAATTCCATTT-TTCATGG
GATGGTGTGCGATACAATTAGAGCATCTACAGCCGGAG-CCCCATTTCCGCCCCAAACGTCAGGCGGTCGGGCTCGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr7B_2028
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TCAAGTATGCAGCCCTTATTCCTGACGAACTCTTACAATGTT-----TAC---TCTTAAATAAAAACATT
CATTCATGTGCTTAGCTCCTCCATTTCTTCTCTCCAGGAGATTTGATGGCACTATGCAGGTGGCAGCATTGTCATTCATC
ATGGTAACTATG------GACTGCGCATGCACGGCCTTTTCTTATGGTACAATCAGTTTGT----------TGCATGCTA
AACTGTGATAATGCCATTTGTGACTTCAGGTGTACATGAGGGCTGTTGATACGCCGGATAACTGCTGGTTCTGAGTGTTG
GTACACGCATGGGTGCAGTTCCACATCTTCATGCACATCGGGTAGGTACAGATTATGGACAGACATGGTCGTTATAAGCA
AGCTAAACGCCATCTTGAGCTGAAATGGAATATGAATTCCTAATG-TTCAGGTGGAACTTCAGGATCCCTGAAGCATCAC
TCCACCAGCCGGTCATGCCCCTGAAGAAGTGAAACTGGGAGATTGCCATGCCACCCATTTACAGCATGGTATGGTCACGA
CCTT--AGTTCATTTCTTTAGCATGTTGTATTCTTGTGGTCTGAAATGC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>chr7B_2028
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TCAAGTATGCAGCCCTTATTCCTGACGAACTCTTACAATGTT-----TAC---TCTTAAATAAAAACATT
CATTCATGTGCTTAGCTCCTCCATTTCTTCTCTCCAGGAGATTTGATGGCACTATGCAGGTGGCAGCATTGTCATTCATC
ATGGTAACTATG------GACTGCGCATGCACGGCCTTTTCTTATGGTACAATCAGTTTGT----------TGCATGCTA
AACTGTGATAATGCCATTTGTGACTTCAGGTGTACATGAGGGCTGTTGATACGCCGGATAACTGCTGGTTCTGAGTGTTG
GTACACGCATGGGTGCAGTTCCACATCTTCATGCACATCGGGTAGGTACAGATTATGGACAGACATGGTCGTTATAAGCA
AGCTAAACGCCATCTTGAGCTGAAATGGAATATGAATTCCTAATG-TTCAGGTGGAACTTCAGGATCCCTGAAGCATCAC
TCCACCAGCCGGTCATGCCCCTGAAGAAGTGAAACTGGGAGATTGCCATGCCACCCATTTACAGCATGGTATGGTCACGA
CCTT--AGTTCATTTCTTTAGCATGTTGTATTCTTGTGGTCTGAAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>SNPs
--------------------------------------------------------------------------------
-------------------------------------------------------------------S-----SSSSSSS
SSSSSSSSSSSSSS---S-S--S---------------------------------------------------------
--------S--------------------SS--S-----S--S----------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S------------------------SSSSS-----------
----S-S-S--S------------------------------------S-------------------------------
---------S--------------------SS----S----SSS-SS-SSS-----------------------------
-------------SSS---------------------S------------------------------------------
-------------S------------------------------------------------------------------
----------------------------------------------------------------SSS----S--------
----SSSSS-S-SS----S-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------S--S---------------S-------S--------------------------------------------
------S--------------------------SS---------------------------------------------
-------------------------------S------------------------------------------------
------------------------------------SS---S--S-----------S----------------------S
-------------SSS-------------------------------S--------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--S--------------------------------------------------------------------S--------
------------------------------------------------------------------------------S-
----------------S---------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S----------------S------SSSSSSS--------------
----------------------SS--------------------------------------------------------
-------------------------------------------------S------------------------S--S--
--S----S------------------------------------SS----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
S----S-----S-----S---------S-SSSSSSSSSSS-----------------S----------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------S-----------------------------
----------------------------------------------------------------------------S---
-----S---------SSS-----------------SS-------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------S----------------------S
----------S----------------------SS---S----S----S---------S---------S---------SS
SSS-------S--------S---SSS---------S---------S-----S----------------------------
S------------------------------S-SSS------------S-------S----------S---S-S---S--
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1139
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
GCCTCTGTGATTCGTCCCT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>reverse_2610
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGATTATCGCCAGACAGGGT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>forward_1761
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CTGAATTTGGGTGGCGTGT
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>reverse_3807
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCCTTTGGACTGTTGATCGC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
