>input_sequence_41244
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--ATGAGCTTGGTGGTCTATCCACTCCTGCGGCTCCCGTGCCGCTGCGCCCTCGCGGCGGCGCCGCGGGCCGCCGCGGCG
TCGGTGGTGTCGCTGTGGGC------CTCGGCCTCGGCGGCGGACGGTGGGGACG------GGGAGCTGACGGCGCGGGA
GAGGCGGGAGAGGCGGAGGGAGGCGCGGGAGCTGAAGGCGCGGGACTGGAAGGAGGAGGTGGAGGAGCGGCTCATCCACG
AGCCGGCGCGGCGGCGGAAGAAGCCGCCGAAGCGGACGTGGCGGGAGGAGCTCAACCTCGACTTCCTCGCCGAGCACGGC
CCGCAGTGGTGGCTCGTGCGCGTCTCCATGGCGCCCGGCACCGACTACGTCGACCTCATCACCAAGGCCGTCGCCCGCCG
CTTCTCCGAGGTCTCCTTCAAGGTAGTATCGCCCCTAAATCTCTCCTCTCGA-CCCCGAATGGAGCAATGGATCGCTCGT
TTGGATCACTGGTCTGCTCTCTCACAAGCATTTTGCCGAACACCTGATGCGTAATGTGCCATGGCCCCATGGGGGTATGT
GGATTGTGTTAT----GAGCAATGCCGCCGTGCAAAAAACTGATCACCACTACTTAAATTTCACATGCACAGAGCATTTA
TGCATAACAAAACCGGTGAGAATGCATTTGGCTATTGGTTGTGAATTCTCATGGCGACACTTGCCGTCGTGAA-------
--------------------------------------------------------------------------------
-GTGAACCCAACGAAAGACAGCCTTCAACTCCCCCTCTTATATTTGCATAACATATA-----------------------
------TCTGCAGATTTACAATCCAGCAATCCAAGTGAAGAAGAGGCTGAAAAGTGGTTTGATCAGTACCAAGTCAAAGC
CTCTGCATCCTGGGCTGGTCTTTCTGTATTGCACCTTAAACAAGGAGCTTCATGATTTTATCAGAGACACTGAAGGTTGT
TATGGTTTTATTGGAGCCACAAGAGGTTCTATGTGGGTACTTCTCAACTCATTCATCAAACCTCTGTCTGAAATTTTATT
TGCACTTTGCTTCGATGTTCTTGTTCGAATTATCCATGCTCTTGC--------------TTAGATAGCTTGCCACCCTGG
ATTTTTCAAGTGTTTGCGATCTAGAATATTGATATTGTACAA-CCGTATGCCGTCCATAGTTT-AGAATCATCCTTTAAC
TCACAAAGTGACAAACACACATTACTCAGTACCCAATTTACCCA-AAACAACTAGCGTACCAATTTAATGATCCGGACTT
CTTTCTGGAGCACAATGGTGCTATGTGCACTTCACATGAAGGTCTTGTTCGAAACAATAACTTGTTTGCTGTAATTGTAG
CAGTGTATGAGTGATAGTAGATGTTCGATATATACAGCT---GCTGATTGTATCTCATATATGTTGTATGATCAGTTTT-
CCCTTCTTGTGGCTGCCATTATACTGATACTTCCACCATGCAGTAAAAGGCAGATTAAGAAGCCTAAACCTATTCCAGTT
GAAGAAGTCGAGTCGATTATTAAAAAGGAAAAGGAGGAACAAGAGAAAGCTGACAAAGAATTTGAAGACTTGGAAAACTG
GGATAAGGGGTCTTTTGGTAAACCCGTTGAAGACTCTGAACTTATGTTAATTAATAAGATCAAGAAACAGGTCAAAAAAT
CAACTTCAAAAGATGCCTCCAGCAACGACACTTTTACGCTCGGTGCCAGCGTTCATGTTCTCTCCGGGCCTTTTGCAGGC
TTCACTGGCTCTCTTCTGGAAGTAAATCGCAAAAATAAGAAGGTTAGGCT--------GATGACAGCTTCATAGTGAGCT
AATTGCCTTGCTGTTCTCGGTTACCTTTTCTTCTCGTATTATCTGGTTAT---CTAAGAAGTATTTTACCTCCCACAGGT
TACTGTCCAGATGACACTTTTTGGCAAGGAGAGCTTTGTAGATCTAGATTTTGATCAAATTGAGGCACTCAATACTTAA-
--------------------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G500900
ACTGCCGTCAATTAACCTCATCACAAACTCGAAATCGAAGAGGATGGCGCACACACACAAAAAAAACTTGAAAAATCCGG
TAGCAAAGATGGGCGCGTGTACCATCTCCTTCTCCAGCTCGCTCCGCACGTCCTTGGGGCCAGCCATTGTCGCGACGCCT
CAGCCTGCACAGACAGAATCGCCGAGCGCACCGATCTAAGCAAGGGAATCGTCCGGGGAAGGCACGGGGGGAGAGAGACG
GGGAGCGAGAT--GCGTCTCTTACCGGGAAGGAAGACCGGAGGAGGCCGGAGACCTCGCGAGCTCGGCGGCGGCGGCGGC
GGTGGTCGAGATGCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCG
GCGAGAAAAGCTCTAGGGTTTTGCCCTCCTTCTTTCTTGGAGGAGGAGGAGGGGGGAGCACCTGCGCGTCCTCATATGGG
CTTCGTTCTGATGCCACTAATGGGCCTACGGGCCCG----------------------------------------AGGT
GATAAGCGGCTCTGTTTTTGTTTTTGAAAAAAAAACAAATTAAATCGCTTCGTTCCCGAGCGGCTTGAGAGAGCTGGGAG
CAATGAGCTTGGTGGTCTATCCACTCCTGCGGCTCCCGTGCCGCTGCGCCCTCGCGGCGGCGCCGCGGGCCGCCGCGGCG
TCGGTGGTGTCGCTGTGGGC------CTCGGCCTCGGCGGCGGACGGTGGGGACG------GGGAGCTGACGGCGCGGGA
GAGGCGGGAGAGGCGGAGGGAGGCGCGGGAGCTGAAGGCGCGGGACTGGAAGGAGGAGGTGGAGGAGCGGCTCATCCACG
AGCCGGCGCGGCGGCGGAAGAAGCCGCCGAAGCGGACGTGGCGGGAGGAGCTCAACCTCGACTTCCTCGCCGAGCACGGC
CCGCAGTGGTGGCTCGTGCGCGTCTCCATGGCGCCCGGCACCGACTACGTCGACCTCATCACCAAGGCCGTCGCCCGCCG
CTTCTCCGAGGTCTCCTTCAAGGTAGTATCGCCCCTAAATCTCTCCTCTCGA-CCCCGAATGGAGCAATGGATCGCTCGT
TTGGATCACTGGTCTGCTCTCTCACAAGCATTTTGCCGAACACCTGATGCGTAATGTGCCATGGCCCCATGGGGGTATGT
GGATTGTGTTAT----GAGCAATGCCGCCGTGCAAAAAACTGATCACCACTACTTAAATTTCACATGCACAGAGCATTTA
TGCATAACAAAACCGGTGAGAATGCATTTGGCTATTGGTTGTGAATTCTCATGGCGACACTTGCCGTCGTGAA-------
--------------------------------------------------------------------------------
-GTGAACCCAACGAAAGACAGCCTTCAACTCCCCCTCTTATATTTGCATAACATATA-----------------------
------TCTGCAGATTTACAATCCAGCAATCCAAGTGAAGAAGAGGCTGAAAAGTGGTTTGATCAGTACCAAGTCAAAGC
CTCTGCATCCTGGGCTGGTCTTTCTGTATTGCACCTTAAACAAGGAGCTTCATGATTTTATCAGAGACACTGAAGGTTGT
TATGGTTTTATTGGAGCCACAAGAGGTTCTATGTGGGTACTTCTCAACTCATTCATCAAACCTCTGTCTGAAATTTTATT
TGCACTTTGCTTCGATGTTCTTGTTCGAATTATCCATGCTCTTGC--------------TTAGATAGCTTGCCACCCTGG
ATTTTTCAAGTGTTTGCGATCTAGAATATTGATATTGTACAA-CCGTATGCCGTCCATAGTTT-AGAATCATCCTTTAAC
TCACAAAGTGACAAACACACATTACTCAGTACCCAATTTACCCA-AAACAACTAGCGTACCAATTTAATGATCCGGACTT
CTTTCTGGAGCACAATGGTGCTATGTGCACTTCACATGAAGGTCTTGTTCGAAACAATAACTTGTTTGCTGTAATTGTAG
CAGTGTATGAGTGATAGTAGATGTTCGATATATACAGCT---GCTGATTGTATCTCATATATGTTGTATGATCAGTTTT-
CCCTTCTTGTGGCTGCCATTATACTGATACTTCCACCATGCAGTAAAAGGCAGATTAAGAAGCCTAAACCTATTCCAGTT
GAAGAAGTCGAGTCGATTATTAAAAAGGAAAAGGAGGAACAAGAGAAAGCTGACAAAGAATTTGAAGACTTGGAAAACTG
GGATAAGGGGTCTTTTGGTAAACCCGTTGAAGACTCTGAACTTATGTTAATTAATAAGATCAAGAAACAGGTCAAAAAAT
CAACTTCAAAAGATGCCTCCAGCAACGACACTTTTACGCTCGGTGCCAGCGTTCATGTTCTCTCCGGGCCTTTTGCAGGC
TTCACTGGCTCTCTTCTGGAAGTAAATCGCAAAAATAAGAAGGTTAGGCT--------GATGACAGCTTCATAGTGAGCT
AATTGCCTTGCTGTTCTCGGTTACCTTTTCTTCTCGTATTATCTGGTTAT---CTAAGAAGTATTTTACCTCCCACAGGT
TACTGTCCAGATGACACTTTTTGGCAAGGAGAGCTTTGTAGATCTAGATTTTGATCAAATTGAGGCACTCAATACTTAAT
GGTACTGAGATTTGTCTGTAATACCTCAGCACTTCTGAATTCTGTTTTCACTTACCTATGACTAAGCACTGGAAAATACT
CCCTCCGTCCCAAAATGTAAGACGTTTTCTCACACTAGTGTAGTGTCAAAAAACGTCTTACATTATGGGACGAAGGCAGT
AGCATTTAACCAGCAGTTTCCAAGAATCAACATCTGGTACTCAACTTGCATCAGGTGGTCATAAAGTAAAAAGAGTACCC
AGGCAGTAATGTATTAAAATCATTAGGGGTTTACTAGTACAAGTGGGGAGTCTCTTTCCCCTGGTTATGGCCTGAAAAGA
ATCATATGGGTAGAAGACTTGCATATTTTTCATACACAAAATAAATTGTGTATCTGGAGTATGTGACCTCACATGTGGGC
C-------TTTGGGTATAGGATAGGACAA-----TCATTCGTTATCATTGCTGCTCCCCCCAAGTGAAGTAAATCAAGTA
TATTTAAGGTTCTGCAGTAAGGAAATTTTATCATTGTTCCATGATATGTCAAAAAAGTTAGGGTGTCCATCAAATCGACT
TTTTCCCCCACAGG-ACTTTCATATATTTGAGATCCTC-TAAGCTTCGTGGGCATTTTTTCCATTCTGGTTTCTCATA--
-TATTTTCGG---------------------TTCTCACATTTGTTTTTCATGTCTGAACAGCTAGGCACAGACCAACTGT
ATCAGTAGTTTTGTTCATTGAAATAGAAGCAAAAGTTTTGTCAGTTGGGCCTTGGAGATATTGGTAAAGCACTT-GGGTA
TGTGTATCTGTTGAAGACGCACCCGATTGGGCAACAAACAGAACAGAATAATTAGCCTGTCATCTACAGTAAACATTAAG
CCGTAAGTACTCTCCATCACCATGTGTTTGAACAACTAAACGATCTCTGTGAACTGATCCTGAACCAAATTACTAGGTGG
G-GGCAGTAAACAGTTATATCGAATATATTTTTGCAGCCTTAT-TCATGTTGAAGTAACTAAATAATCTCTTCTTTCAGC
>chr5D_5
----CCGTCAGTTAACCTCATCACAAACTCTCCAAATCGAA--ATCGCGCAACCACACATAATAAAACATCAAAATTCGG
AAGCTAAAATCGGCGCGCGTACCATCTCCTTCTCCAGCTCGCTCCGCACGTCCTTGGGAGCAGCCATTGTCGCGACGCCT
TAGCCTGCACAGACAGAATCGCCGAGCGCACCGATCTAAGCAAGGGATTCATCCGGGGAAGGGACGGGGAGC--------
-------AAGACGGCGTTTCTTACGGGGAAGGGG----------GGCCGGAGATCTCGCGAGCTGGGCGGCGGCGGCGGC
GGTGGTCGAGATGCCGCGGTCGCGAAGGGGAACGCTGGAGCAG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CG
GCGAGAAAAGCTCTAGGGTTTTGCCCTCCTTCTTTCTTGGAGGAGG--------GGGGCACCTGCGCG-CCTCATATGGG
CTTCGCACTAACTCC---AATGGGCCTACAGGCCCGAGTATGTTCGCCGGCCCAAGGCCCACGTTTCTGGGCCGGCAGGT
GATAAGCGGCTCTATTTTTTTAAAGTAAG----------TTAAATCGCTTCGTTCCCGAGCGGCTTGAGAGAGCTGGGAG
CAATGAGCTTGGTGGTCTATCCACTCCTGCGGCTCCCGTGCCGCTGCGCCCTCGCGGCGGCGCCGCGGGCCGCCGCGGCG
TCGGTGGTGTCGCTGTCGGCATCGGCCTCGGCCTCGGCGGCGGACGGCGGGGACG------GGGAGCTGACGGCGCGGGA
GAGGCGGGAGAGGCGGAGGGAGGCGAGGGAGCTCAAGGCGCGGGACTGGAAGGAGGAGGTGGAGGAGCGGCTCATCCACG
AGCCGGCGCGGCGTCGGAAGAAGCCGCCGAAGCGGACGTGGCGGGAGGAGCTCAACCTCGACTTCCTCGCCGAGCACGGC
CCGCAGTGGTGGCTCGTGCGCGTCTCCATGGCCCCCGGCACCGACTACGTCGACCTCATCACCAAGGCCGTCGCCCGCCG
CTTCTCCGAGGTGTCCTTCAAGGTAGTATCGCCCCTAG-TCTCTCCTCTCGCCCCCCGAATGGAGCTATGGGTCGCTCGT
TTAGATCACTGGCCTCTCTCATG---AGCATTTTGCCGAACACCTGAAGCGTAATGTGCCATGG---------GGTGTCT
GGATTGTGCTAT----GAGCAATGCCGCCGTGCAAAACTCTGATCACCACTACTTAAATTTCACATGTGCAGAGAAGTTA
TGCATAACGAAACCTGTGAGAATGCATTTGGCTATTGGTTGTGAATTCTCATGGCGACGCTTGCCGTCGTGTTTCAGTTT
TCAGTAACTAAAAAGTTTCTAGTTCTTATTCCTTTAATCATACAATCAATCATGGTAAAATTTGGGTTAGTGAGATGTGA
GGTGAACCCAACGAAAGACAGCCTTCAACTCCCCCTCTTAT--TTGCATAACATATA-----------------------
------TCTGCAGATTTACAACCCAGCAATCCAAGTGAAGAAGAGGCTGAAAAGTGGTTTGATCAGTACCAAGTCAAAGC
CTCTGCATCCTGGGCTGGTCTTTCTGTATTGCACATTAAACAAGGAGCTTCATGATTTTATCAGAGACACTGAAGGTTGT
TATGGTTTTATTGGAGCCACAAGAGGATCTATGTGGGTACTTCTTAGCACATTCATCAAACCTCTGTCTGAAACTTTATT
TGCTCTTTGCTTCGATGTTCTTGTTCGAATTATCCATGCTCTTGCTTATACAGCTC-TGTTAGATAGCTTGCCACCCTGG
ATTTTTCAAGTGTTTGCAATCTAGAGTATTGATATTGTACAAACCGTATGCCGTCCATAGTTT-AGAATCATCCTTTAAC
TCACAAAGTGACAAACACGCATTACTCAGTACCCAATTTACCCAAAAACAGCTAGCGCACCAATTTAATGATCCGGATTT
CTTTTTGGAGCACAATGGTGCTATGTGCACTTCACATGAAGATCTTGTTCGAAGCAATAACTTGTTTGCTGTAATTGTAG
CAGTGTATGAGTGATAGTAGATGTTCGATATATACAGC---AGCTGATTGTATCTCATATATGTTGTATGATCAGTTTT-
CCCTTCTTGTGGCTGCCATTATACTAATACTTCCACCGTGCAGTAAAAGGCAGATTAAGAAGCCTAAACCTATTCCAGTT
GAAGAAGTCGAGTCGATTATTAAAAAGGAAAAGGAGGAACAAGAGAAAGCTGACAAAGAATTTGAAGACTTGGAAAACTG
GGATAAGGGGTCTTTTGGTAAACCCGTTGAAGACTCTGAACTTATGTTAATTAATAAGATCAAGAAACAGGTCAAGAAAT
CAACTACAAAAGGTGCCTCCAGCAACGACACTTTTACGCTCGGTGCCAGTGTTCATGTTCTCTCCGGGCCTTTTGCAGGC
TTCACTGGCTCTCTTCTGGAAGTAAATCGCAAAAATAAGAAGGTTAGGCTGAGTGGCTTATGATAGCTTCATAGTGAGCT
AATTGCCTTGCTGTTCTCCGTTACCTTTTCTTCTCGTCTTATCTGGTTATTATCTAAGAAGTGTTTTACCTCCCACAGGT
TACTGTCCAGATGACACTTTTTGGCAAGGAGAGCTTTGTAGATCTAGATTTTGATCAAATTGAGGCACTGAATACTTAAT
GGTAATGAGAGTTGTCTCTAATACCTGAGCACTTCTGAATTCTGTTTTCGCTTACCTATGACTGAGCACTGGA-------
----------------------------------------------------------------------------CAAT
GGCATTTAACCGACAGTTTCCAAGAATCAACATCTGCTACTCAACTTGCATCAGGTGGTCATAAAGTAAAAAGAGTACCC
AGGCAGTAATGTATTCAAATCATTAGGAGGTTACTAGTACAAGTGGGGAGTCTCTTTCCCCTGGTTATGGCCTGAAAAGA
ATCATATAGGTAGAAGACTTGCATATTTTTCGTACACAAAATAAATTGTGTATCTGGAGTATGTGACCTCACATGTGGGC
CTTTGCCCTTTGGGTATAGGATAGGACAA-----TCATTCGTTATCATTGCTGCT-CCCCCAAGTGAAGTAAATCAAGTA
TATTTAAGGTTCTGCAGTAAGGAAATTTTATCATTGTTCCATGATATGTCAAAAAAG-TAGGGTGTCAATCAAATCGACA
TTTTTTCCCCAGAGTACTTTCATATATTTGAGATCCTC-TAAGCTTCGTGGGCC-TTTTCTCATTCTGGTTTCTCATA--
-TATTTTGGATTCTACAAAAAAGAC----GTTTCTCACATTTGTTTGTCATGTCTGAACAGCTAGGCACACACCCACTGT
ATCAGTAGTTTTGTTTTTCGAAATAGAATCAGAAGTTTTATCAGTTGGGCCCTGGAGATATGAATAAAGCACTTGGGGTA
TATGGATCTGTTGAAGAC-CACCGGATTGGGTGACAAACACAAGAGAAGAGTTAGCCTGTGAGC--CAGTAAACATTAAG
CCGTAAGTACTCTCCACCACCATGTGTTTGAACAACTAAACGAGCTCTGTGATTGGATCCGGAACTAAATAACTAGGTGG
CCGGCAGTAAGCAGGGATAGGGAACATATTTTTGCAGCCTTATCTCATGTTGAAATAACTAAATAACCTCTTCTTCAGC-
>chr5A_5
----CCGTCAGTTAACCTCATCACAAACTCGAAATCGAAGAGGAGGG--------CACAAAAAAAACATGGAAAATCCGG
AAGCAAAGACGGGCGCGCGTACCATCTCCTTCTCCAGCTCGCTCCGCACGTCCTTGGCGGCAGCCATTGTCGCGACGCCT
TCGCCTGCACAGACAGAATCGCTGAGCGCACCGATCTAAGCGAGGGAATCGTCCGAGGAAGGCACGGGGGGA-AGAGACG
GGGAGCAAAGACGGCGGTGCTTACGGGGAAGGATGACCGGAGTAGGCCGGAGATCTCGCGAGCTCGGCGGCGGCGGCGG-
--TGGTCGAGATGCCGCGGAGGCGAAGAGGAACGCTAGAGCAGCCGCGCCTC----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------AATCTCTAGGGTTTTGCTCTTCTTCTTTCTTGGAGGAGGAGGA-GGAGGAGGACCTGCGCGTCCTCATATGGG
CTTCGTGCTGACACCG----TGGGCCTCCGGGCCCGCGTACGTTCGCCGG-CCAAGGCCCACGTTTCTGGGCCGGTAGGT
GATAAGCGGCTATATTTTGTTTTTGAAAAAAAAAACTC----AATCGCTTCGTTCCCGAGCGGCTC----------GGAG
CTATGAGCT---TGGTCTATCCACTCCTGCGGCTCCCGTGCCGCTGCGCCCTCGCGTCGGCGCCGCGGGCCGCCGCGGCG
TCGGTGGTGTCG------GCCTCGGCCTCGGCCTCGGCGGTGGACGGCGGGGGCGGGGACTGGGAGCTGACGGCGCGGGA
GAGGAGGGAGAGGCGGAGGGAGGCGAGGGAGCTCAAGGCGCGGGACTGGAAGGAGGAGGTGGAGGAGCGGCTCATCCACG
AGCCGGCGCGGCGGCGGAAGAAGCCGCCGAAGCGGACGTGGCGGGAGGAGCTCAACCTCGACTTCCTCGCCGAGCACGGC
CCCCAGTGGTGGCTCGTGCGCGTCTCCATGGCGCCCGGCACCGACTACGTCGACCTCATCACCAAGGCCGTCGCCCGCCG
CTTCTCCGAGGTCTCCTTCAAGGTAGTATCGCTCCTAG-TCTCTCCTCTAGCCT-CCGAATGGAGCAATGGGTCGTTCGT
TTAGATCGCTGGCCTCTCTCATG---AGCATTTTGCCGAACACCTGAAGCGTAATGTGCCATGG---------GGTATCT
TGATTGTGCTATATATGACCAATGCCGCCGTGCAGAACTCTCATCGCCACA---TAAATTTCACACCTACGGAACAATTG
TGCATAACAGAACCTGTGAGGATGCATTTGGCTATTGGTTGTGAATTCTCGCGGCGACACTTGCCGTTTCA------TTT
TCAGTAACTAATTTTTTTGTAGTCCTTGTTACTTGAATCATG----CAATCATGTTAAACTTTGGGCTAGTGAGATGTGA
GGTGAATCCAACTACGATAGCCTG------------CTTAT--TTGCAAGCCATGCTGCCTTGAGCTGTCCTTCTCACAA
ATATTCTCTGCAGATTTACAATCCTGCAATCCAAGTGAAGAAGAGGCTGAAAAGTGGTTTGATCAGTACCAAGTCAAAAC
CTCTGCATCCTGGGCTGGTCTTTCTGTACTGCACCTTAAACAAGGAGCTTCATGATTTCATCAGAGACACCGAAGGTTGT
TATGGTTTCATTGGAGCTACAAGAGGTTCCATGTGGGTACTTCTCAACCCATTCACT-AACCTCTGTCTGAAACTTTATT
TGCTCTTCGCTTCGATTTTCTTGTTCGAATTGTCCATATTATTGCTTATACAGCTGATGTTAGATAGCTTGCCACCCTGG
ACTTTTGAAGTGTTTCTGATGAGTATTGT--ATATTGTACAA-TCATGTGCCGTCCGTAGTTGCAGAATAATCCTTTAAC
CCACAAAGTGACCAACACGCATTACTCAGTACCCAATTTCCCCAAAA-CAGCTAGTGTACCAATTTGATGATCTGGACTT
CTTTTTGGAGCAAAATGGTGCTCTGTGCACTTGACATGAAGAACTTTTTGGAAGCGATAACTTGTTTGCTGTAATTGTAG
CAGTGTATGAGTTATACTAGGTTTTTGATATGTAGTAACATAGCAGATCGGATCTCATATCTGTTGTATGATCAGTTGTG
CCCTTCTTGTGCGTGCCATCGTAACAATACTTTCACCGTGCAGTAAAAGGCAGATTAAGAAGCCTAAACCTATTCCAGTT
GAAGAGGTCGAATCAATTATTAAAAAGGAGAAGGAGGAACAAGAGAAAGCTGACAAAGAATTTGAAGACCTGGAAAACTG
GGATAAGGGGTCTTTTGGTAAACCCGTTGAAGACTCTGAACTTATGTTAATTAATAAGATCAAGAAACAAGTCAAGAAAT
CAACTTCAAAAGGTGCCTCCAGCAACGACACTTTTACGCTTGGTGCCAGTGTTCATGTTCTCTCCGGGCCGTTTGCAGGC
TTCACTGGCTCTCTTCTGGAAGTAAATCGCAAAAATAAGAAGGTTAGGCTGAATGGCTGATGACAGCTTCATAGTGAGCT
AATTGCCTTGCTGTTCTCCGTTACCTTTTCTTCTCGTATTATCTGGTTAT---CTAAGAAGTGTTTTACCTCCCACAGGT
TACTGTCCAGATGACACTTTTTGGCAAGGAGAGCTTTGTAGATCTAGATTTTGATCAAATTGAGGCACTGAATACTTAAT
GGTAATGAGAGTTGTGTCTAATACCTGAGCACTTCTGAATTCTGTTTTCGCTTACCTATGACTGAGCACTGGA-------
----------------------------------------------------------------------------CAAT
AGCATTTAACCATCAGTTTCCAAGAATCAACATCTGCTACTCAACTTGCATCAGGTGGCCATAAAGTAAAAACAGTACCC
AGGCAGTAATGTATTATAATCATTAGGGGGTTACTAGTACAAGTGGGGAGTCTCTTTCCCCTGGTTATGGCCTGAAAAGA
ATCATATAGGTAGAAGGCTTGCATATTTTTCATACACAAAATAAATTGTGTATCTGGAGTATGTGACCTCACATGTGGGC
C-------TTTGGGTATAGGATAGGACGATCATTTCATTCGTTATCATTGCTGCT-CTCCCAAGTGAAGTAAATCAAGTA
TATTTAAGGTTCTGCTGTAAGGAAATTTTATCATTGTTCCATGATATGTCA-----G-TAGGGTGTCCATCAAATTGACT
TTTCCCCCACAGTACT-TTCCATACATTTCAGACCCTCTTAAGCTTCGTGGGCC-TC---CCATTCTGGTTTCTCATACT
ATATTGTGCGTTCTTATAAAAAGAAAAATGTTTCTCACATTTTTTTTTCATGTCTGAACAGGTAGGCACAGA-CCACTGT
ATCAGTAGTTTTGTTTTTCAAAATAGAATCAGAAG-TTTGTCAGTTGGGCCCTGGAGATATGAATAAAGCACTTGGGGTA
TATGGATCTGTTGAAGAC-CACTGGATTGGGTGACAAACACAAGAGAAGAGTTAGCCCGTGGGC--CAGTAAACGTTAAG
CCGTAAGTACTCTCCACCACCATGTGTTTGAACAACTAAACGAACTCTGTGAATGGATCCTGAACTAAATTACTAGGTAG
G-GAGGAGTAAACAGGGAATGGCT----TTTTTGCAGCCTTAT-TCATGTTGAAACAACTAAATAATCTCTTCTTTCAGC
>SNPs
SSSS------S----------------------------------------SS--------------S--S---------
S----------------S-----------------------------------------S--------------------
S-----------------------------------------------------------------------S-------
------S-SSS------S------S--------S--------S----------S--------------------------
-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
--------------------------------------------------S--S--------------------------
------S----SS--SSS--------------------------------------------------------------
-------------S-----S----SS----------SSS-----------------------------------------
--------------------------------------------------------------------------------
----------------S------------------------------S--------------------------------
-------------------------S-------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------SS------------S-------------------S--------
--S---------S--SSSSSS-SSSS---------------------S----------------SSSSSSSSS-----S-
--------S----------------------------SS----------------------------S--------S---
--------------S--------------------------------------------------------SS-------
--------------------------------------------------------------------------------
-----------------------------------------SS-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S------------------------S------
---S----------------------------------------------------------------------------
-------------------------S------------------------------------------------------
------------------S-------------------------------S-----------------------------
----S------------------------------------S-----------S--------------------------
--------------------------------------S-----------------------------------------
-------------------------S-----------S------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
------------S------------------------------------S------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------S-----------------
---------------------------------------------------------------------S----------
----S-----S------S--------S----------------------S-------------S---------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-
------------S-----------------------S-------------------------------------------
-----------------------------S--------------------------------------------------
-------S------------------------------------------------------------------------
-------------------------------------------------------S------------------------
---------------------------------------------------------S----------------------
---------SSSS----------------------------------------SS----S--------------------
-------S------------------------------------------------------------------S-----
---------------SS-S---------S--S-------------------S---------SSS----------------
-S--S-------------S----S-------SS-------S--S----S-S---------S-S-SS--------------
----------------S--------------------------S---------SS----------S--------------
--------------SS----S---S-----------------------------S-------------------------
>forward_974
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------CGAGGT
GATAAGCGGCTCTG------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2850
--------------------------------------------------------------------------------
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-------------------------------------------------CGTTCATGTTCTCTCCGGGC-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>forward_1585
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------GATGCGTAATGTGCCATGGC---------------
--------------------------------------------------------------------------------
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>reverse_3267
--------------------------------------------------------------------------------
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------------------------------------------------------------------GGGACGAAGGCAGT
AGCATT--------------------------------------------------------------------------
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