>input_sequence_41231
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ATGCCGTTGGACCAGCCAGCGTCCGCCCGG
CGCGCCCCCACCTTCCACGCGCATCCTGAGGCCGACGCGAGGCAGCTCCTCGGCGCGCTCCTGCCGCGGCGCGCGGCCAC
CGCCCGCCACGTCCAGCAGGCGCACGCCCGCCTCGCCGTCCTCGGCCTCGCCACCGCGCGCGTCCTCCCGCACCTCCTCG
CGGCCCTCCCCCGCCTCCCGCCGCTCCACGACGGCG------CCTCCTCCTCCTCCTACCCGCTCTCCCTGTTCCGCCGC
TCCAACTCCTCCTCCGCCTTCGCGTCCAACCACCTCCTCCGCGTGCTCCCCCACCCGCTCCCGCTCCGTCTCTTCCCCGG
CCCCCGGCGCCGCAACCCCCACTCCTTCACCTTCCTTCTCTCCTCCCTCTCCACCCACCTCGACGCCGACCGCGCCGGCG
GCCCGGCCTCCTCCTCCTCTCTGGGCTCCCACGTGCACGCGCTGGCCGTGAAGGCGGGCGCCGCGGCGGATCTCTACGTG
CGGAACGCGCTGACGCACTTCTACGGCGTCTGCGGCGACGTGGGAGCGATGCGGAGGGTGTTCGACGAGCTGCCGCGCGT
GCGGGACGTCGTGACCTGGAACGCGGTCCTCGCTGGGTACGTCCGAGCGGGCATGGCGAGGGTTGCACGAGAGATGTTTG
ATGAAATGCCGGTGAGAGACGAGGTTTCCTGGAGCACCGTGGTGGGCGGGTATGTGAAGGAAGGGGAGCTGGACGTGGCA
CTGGCGGTGTTTAGGGATATGGTGGAGAAGGGCGTGAGGGTGAATGAGGCTGCGGTGGTGACAGCATTGTCGGCGGCCGC
ACAGCTGGGTTTGCTTGAGCATGGCAGGTTTGTGCACCAGGTTGTCCATCAAGAAGGGATGCCGATCAGTGTCAATGTAG
GGGCTGCCATGGTGGATATGTATGCCAAGTGCGGCTGTGTGGCAGTGGCGAGGGAAGTTTTTGATGGGATGCCGAGGAGG
GATGTTTTTGCATGGAACGCCATGATCTGTGGACTTGCTGCTCATGGGTTGGGACAGGATGCAGTGGAACTCTTTGAACT
GTTTCTCGGCGAGGGTTTGAGTCCAACGAACATTACGTTTGTTGGTGTGCTAAATGCCTGCAGCCGCTTTGGCCTTGTTG
CTGAGGGGCGGCAGTATTTTGAATTGATGGCTGAAAAATATAGTGTTGAGCCAGAAATGGAGCATTACGGCTGCATGGTT
GATCTTCTAGGTCGGGCTGGTCTTGTTCAAGAAGCCATTGAATTGATTGAAGGGATGCCTATTGCACCTGATCCAGTTCT
CTGGGGCACTGTACTCTCGGCTTGCAAGAAACATGGCCTGGTGGACTTGGGGGTCAAGGTTGGTAGCAAGCTAATTGAAC
TGGAACCAGCTCATGATGGCCACTATGTCCTCCTTGCAAGTATATATGCGAAGGCAAAGAAATGGGATGAAGTCAGGGAA
GTCAGGAAACTGATGTCTAGTCGGGGTACCAGCAAGTCAGCTGGCTGGAGCTTGATGGAAGCACAAGGAAACGTGCATAA
GTTTCTAGTAGGAGACATGGATCACAAGGATTCCATTCGGATATATAACATGCTCGACATGATTAACAGAAGGTTGGCAG
ATGCAGGGTACGTACCAGACGTGTCATCTGTATTGCATGACATTGGAGATGAAGAGAAGGTGCATGCAGTCAAGGTGCAC
AGCGAGCGTCTGGCAATTGCTTATGGGTTCATAGTTACGGAAGTTGGCAACCCAATCCGTATTGTTAAGAACCTTCAGGT
GTGTGGGGATTGTCATGAATTCAGTAAGATGGTGACAAAGGTTTTCAATAGGGAGATTATTGTGAGAGATGGCAGTAGAT
TCCATCATATGAAAGAAGGGAAATGTTCTTGCCTTGACTATTGGTAG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr2A_1_TraesCS2A01G496800
CTCTCCCCGCATCGGGATCCTGAAAGTCGCCATCACACCCACCTTGTCGCCCCCGACCCTTGCTGGATACCCCGTCGGAT
GAGGGCCATCATGCGGTCGCTCATCAATGAGGGCATCTATGTCAAGCTCTATCTCGATCGACCCATCTTTCTTGTTGAGT
TTGTTGTGTTGTGTTTTAGCACCGTCCTGGCATCAGTCCGTGACTTTCAAAGGTCGTTGGAATATACAAGTATGACATAT
AGGTTTGATTCCCCCGTTGGAACAAAAGCAATTGTGAAGACTTCACATAGCTGAAAAA-TATAACGCGATGGTCGCCTAT
AGTCTGGTTCTTAACAAATTGCTCAAAGAAGTAAGAATAAAGGATACAAAAGGCAATAATTCATGTGCAAAACAAAAATG
GTTAAAAAGAAATGTCATCAAAGGGTTTGAGTGATTTTTGCAATTGTTGTGTGTTTCTTTTTGTAACCGGGACGAAAGA-
AAGAAAAAATCGTCTTTCCTTTGCTTCACCTCTAAATTAGTTGGACAAACAATGTCATCAAATGTTTGATTTGATTTATT
GGGCTTAATGAAGGACATATTGTTCATAAGATTTGATCGAGTTATCGTAGGACATGCTTCGAGTAGCATACGCAAAGAG-
AAGTGATTTGGTTTAGATTATTCCGAATCAAGGGGGGCGTGTAGAGGGAAAAGGCAATGTAGGGGGTAGAGGGAGGAAAC
CTAGAGGCGAGGAGGTGAAGGTACCAACTTATTTTTAATAGTTGAGATTATTTAGATTATTTAGGTACTCTAGAAATGAA
TCTTATTTCGAAGTGAAGTTTTGTGTGAAATTATTGATTTTCATAAATCAGACCTTAAGAAAAATTATAATACTTGCAAA
AAGTTTGCAATACTCCTGTCCTTTCAAGAAAAACCTTTTGGATCAATGAGCTCTCGCAGTCTGTCG-------TTCTCAA
GTCCAAAACTTGGAGGTACTCGCCGCCCCGTGGTTGGCACCGTCGTCTCCATGCCGTTGGACCAGCCAGCGTCCGCCCGG
CGCGCCCCCACCTTCCACGCGCATCCTGAGGCCGACGCGAGGCAGCTCCTCGGCGCGCTCCTGCCGCGGCGCGCGGCCAC
CGCCCGCCACGTCCAGCAGGCGCACGCCCGCCTCGCCGTCCTCGGCCTCGCCACCGCGCGCGTCCTCCCGCACCTCCTCG
CGGCCCTCCCCCGCCTCCCGCCGCTCCACGACGGCG------CCTCCTCCTCCTCCTACCCGCTCTCCCTGTTCCGCCGC
TCCAACTCCTCCTCCGCCTTCGCGTCCAACCACCTCCTCCGCGTGCTCCCCCACCCGCTCCCGCTCCGTCTCTTCCCCGG
CCCCCGGCGCCGCAACCCCCACTCCTTCACCTTCCTTCTCTCCTCCCTCTCCACCCACCTCGACGCCGACCGCGCCGGCG
GCCCGGCCTCCTCCTCCTCTCTGGGCTCCCACGTGCACGCGCTGGCCGTGAAGGCGGGCGCCGCGGCGGATCTCTACGTG
CGGAACGCGCTGACGCACTTCTACGGCGTCTGCGGCGACGTGGGAGCGATGCGGAGGGTGTTCGACGAGCTGCCGCGCGT
GCGGGACGTCGTGACCTGGAACGCGGTCCTCGCTGGGTACGTCCGAGCGGGCATGGCGAGGGTTGCACGAGAGATGTTTG
ATGAAATGCCGGTGAGAGACGAGGTTTCCTGGAGCACCGTGGTGGGCGGGTATGTGAAGGAAGGGGAGCTGGACGTGGCA
CTGGCGGTGTTTAGGGATATGGTGGAGAAGGGCGTGAGGGTGAATGAGGCTGCGGTGGTGACAGCATTGTCGGCGGCCGC
ACAGCTGGGTTTGCTTGAGCATGGCAGGTTTGTGCACCAGGTTGTCCATCAAGAAGGGATGCCGATCAGTGTCAATGTAG
GGGCTGCCATGGTGGATATGTATGCCAAGTGCGGCTGTGTGGCAGTGGCGAGGGAAGTTTTTGATGGGATGCCGAGGAGG
GATGTTTTTGCATGGAACGCCATGATCTGTGGACTTGCTGCTCATGGGTTGGGACAGGATGCAGTGGAACTCTTTGAACT
GTTTCTCGGCGAGGGTTTGAGTCCAACGAACATTACGTTTGTTGGTGTGCTAAATGCCTGCAGCCGCTTTGGCCTTGTTG
CTGAGGGGCGGCAGTATTTTGAATTGATGGCTGAAAAATATAGTGTTGAGCCAGAAATGGAGCATTACGGCTGCATGGTT
GATCTTCTAGGTCGGGCTGGTCTTGTTCAAGAAGCCATTGAATTGATTGAAGGGATGCCTATTGCACCTGATCCAGTTCT
CTGGGGCACTGTACTCTCGGCTTGCAAGAAACATGGCCTGGTGGACTTGGGGGTCAAGGTTGGTAGCAAGCTAATTGAAC
TGGAACCAGCTCATGATGGCCACTATGTCCTCCTTGCAAGTATATATGCGAAGGCAAAGAAATGGGATGAAGTCAGGGAA
GTCAGGAAACTGATGTCTAGTCGGGGTACCAGCAAGTCAGCTGGCTGGAGCTTGATGGAAGCACAAGGAAACGTGCATAA
GTTTCTAGTAGGAGACATGGATCACAAGGATTCCATTCGGATATATAACATGCTCGACATGATTAACAGAAGGTTGGCAG
ATGCAGGGTACGTACCAGACGTGTCATCTGTATTGCATGACATTGGAGATGAAGAGAAGGTGCATGCAGTCAAGGTGCAC
AGCGAGCGTCTGGCAATTGCTTATGGGTTCATAGTTACGGAAGTTGGCAACCCAATCCGTATTGTTAAGAACCTTCAGGT
GTGTGGGGATTGTCATGAATTCAGTAAGATGGTGACAAAGGTTTTCAATAGGGAGATTATTGTGAGAGATGGCAGTAGAT
TCCATCATATGAAAGAAGGGAAATGTTCTTGCCTTGACTATTGGTAGTTAATCAGCTTATAGTTTTTTATTGTTGTTGAA
TTCAGTCATTTTGCTGGAGTCAAAGAGTTGGTGGCTGACATCAATGTTCTAGTTTGCAGCATATCCCAATTCATTTGACA
TCGGCAGCCTCCTGCTGCTTAAGTTTTCAGCTGTTTTTTTTAACCCAATACTGTAGGGGAGGCTCCGACAGTAAATTCTA
TACAGGAGTTTGAGCAGTTGAGTCAAGCCAGACGCAAATGGGATCAGCAATATCAGACTTCATTCTAAAGTAGATGAGGT
AAAATTCCCGCTTAGAAATAAAAGACCAAGATCCTAAGCTAGAGGAGATGTTGTTGAAGGTTTTCACATTCCTTTGTTTC
TAAATGGACTAGGGAACAATGATGTAAGCTTCCAGGAAGAAGGGATTGTGGAAGTTTAATTTGGCAGAGGCAATCATGCT
GTAGAAATTCCGAGATGAATTCTGGGGCAAACCGATATGATCCAGCATTCCATGCTATGACAGT---GCCAGAAGAGATG
ATCACTGGTCTCAAGAGATTCAGTAGAGCATAGAACACAGTTGTACCCGTCTTCAATGTGCATATTTCTCCGTTGAAGCA
TGTCTCTGGTGTTGAGCATGTCCATGAGAAGCAGCCAGTCAAAAACTTGAGCAGAGAGGGGCACTCGTAAACCTCGGAGA
AAGAAGAGTCCACCACCCCAGGGGTAGAACCATTCATCACCAGCATTAGTTTGAGGTGTGCATCCTGGAGGATGGAGCTG
AGGAGCTGCAGCTTGTCAATAACTTGAGCAGAGAGGGGCAGGTGGAAAGATATGAGATGTCGGGGTGAGCCAGGGCCTGG
GGCTCAGGGATCTGGTTATTGATGGCAAAGGGGTCAAGCCTGGGGAAGCGAAGGTGAAGCTTTGTACCGGGGCCAAGCCA
GCGATCACTCCAAAAACCCAATGGTGCTGCCCCTTCCAGCAGAGCAAGAGGGCACATGGAGGAATTTGCTGTGAAGATTG
AGCAGTCTCG
>chr2D_1
CTCTCCCCGCATCGGGATCCTGAAAGTCGCCATCACACCTACCTTGTCGCCCCCAACCCTTGTTGGATACCCTGTCGGAT
CAGGTCCATCATGCAGTCGCTCATCGACGAGGGCATCTATGTCAAGCTCTATCTCGATCGACCCATCTTTGTTATTGAGT
TTGTTGTGTTGCGTTTTAGCAATGTAATGGCATCAGTCCGTGACTTTGAGAGGTCGTTAGAATATACAAGTATGACATTT
AGTTTTGATTCCCCCGTCGGAACAAAAACAATTGTGAAGACTTCACATAGATGCAAAAATATAACGCGACGGTCGCTTAT
AGTACGGTTCTTAACAAACTGTTCAAAGAAGTAAGAATAAAGGATACAAAAGGCAAGAATTTCACGTGCAAAACAAAATG
GTTGAAAAGAAATGTCATCAAAGGGTTTGCGTGA-TTTTGCAGTTGTTGTGTGTTT--TTTTGTAAGCGGGACAAAATGG
AAAAAAAAATCATCTTTCCTTTGCTTCACTTCTAAATTAGTTGGACAAACAATGTCATCAAATGTTTGATTTGCTTTTTT
T---TTAGTGAAGGACATGTTTTTCGTAAGATTTGATTGAGTTGACGTAGGACATGATTTCCAATAGCACAAGGAAAGAA
AAGTGATTTTGTTTAAATTATTCCGAATCAAGGGGGGCATGGCGAGGGGGAAATAGGGTATGGTATGAGCATTGTCTTAT
TCCAAGGGAAG---------------------------------------------------------------------
--------------------TTGTGTGAAATTATTGATTTTCATAAATCAGACCTTGAGAAAAATAATAATAATTGCAAA
---TTTGCAATACTCCCGTTCCTTCAAGAGAAAACTGTTGGATCAATGAGCTCTCGCTGTCTGTCTCCCGTCTTTCTGAA
GTCAAAATCTTGGAGGCACCCGCCGCCCTGGGGTTGGCGCCGCCGTCTCCATGCCGTTGGAGCAGCCCGCGTCCGCCCGG
CGCGCCCCCACCTTCCACGCGCATCCTGAGGCCGACGCGAGGCAGCTCCTCGGCGCGCTCCTGCCGCGGCGCGCGGCCAC
CGCCCGCCACGTCCAGCAGGCGCACGCCCGCCTCGCCGTCCTCGGCCTCGCCACCGCGCGCGTCCTCCCGCACCTCCTCG
CCGCCCTCCCCCGCATCCCGCCGCTCCACGACGGCGCCTCCTCCTCCTCCTCCTCCTACCCGCTCTCCCTGTTCCGCGTC
TCCAACTCCTCCTCCGCCTTCGCGTCCAACCACCTCCTCCGCGTGCTCCCCCACCCGCTCCCGCTCCGCCTCTTCCCCGG
CCTCCGGCGACGCAACCCCCACTCCTTCACCTTCCTCCTCTCCTCCCTCTCCACCCACCTCGACGCCGACCGCGCCGGCG
GCCCGGCCTCCTCCTC---TCTTGGCTCCCACGTGCACGCGCTGGCCGTGAAGGCGGGCGCGGCGGGTGATCTCTACGTG
CGGAACGCGCTCACGCACTTCTACGGCGTCTGCGGCGACGTGGGAGCGATGCGGAGGGTGTTCGACGAGCTGCCGCGCAT
GCGGGACGTCGTGACCTGGAACGCGGTCCTTGCAGGGTACGTGCGAGCGGGCATGGCGAGGGTTGCACGAGCGTTGTTTG
ATGAAATGCCGGTGAGAGATGAGGTGTCTTGGAGCACCGTGGTGGGCGGGTATGTGAAGGAAGGGGAGCTGGACGTGGCC
CTGGCGGTGTTTAGGGATATGGTGGAGAAGGGGGTCAGGGTGAATGAGGCTGCGGTTGTGACGGCGTTGTCGGCGGCCGC
ACAGCTGGGTTTGCTTGAGCATGGCAGGTTTGTGCACCAGGTTGTCCATCAAGAAGGGATGCCGATCAGTGTGAATGTAG
GGGCTGCCATGGTGGATATGTATGCCAAGTGCGGGTGTGTGGCACTGGCCAGGGAAGTTTTCGATGGGATGCCGAGGAGG
GACGTTTTTGCATGGAACGCCATGATCTGTGGACTTGCTGCTCATGGGTTGGGACAGGATGCAGTGGAACTCTTTGAACT
GTTTCTCGGCGAGGGTTTGAGTCCAACGAACATTACGTTTGTTGGCGTGCTAAATGCCTGCAGCCGCTTTGGCCTTGTTG
CTGAGGGGCGGCGCTATTTTGAATTGATGGCTGAGAAATATTGTGTTGAGCCAGAAATGGAGCATTACGGCTGCATGGTT
GATCTTCTAGGTCGGGCTGGTCTTGTTCAAGAAGCCATTGAATTGATCGAAGGGATGCCTATTGCACCTGATCCGGTTCT
CTGGGGCACTGTACTCTCGGCTTGCAAGAAACATGGCCTGGTGGACTTGGGGGTCAAGGTTGGTAACAAGCTAATTGAAC
TGGAGCCAGCTCATGATGGCAACTATGTCCTCCTTGCAAGTATATATGCGAAGGCAAAGAAATGGGATGAAGTCAGGGAA
GTCAGGAAACTGATGTCTAGTCGGGGTACCAGCAAGTCAGCTGGCTGGAGCTTGATGGAAGCACAAGGAAACGTGCATAA
GTTTCTAGTAGGAGACATGGATCACAAGGATTCCGTTCAGATATATAACATGCTCGACATGATTAACAGAAGGTTGGCAG
ATGCAGGGTACGTACCAGACGTGTCATCTGTATTGCATGACATTGGAGATGAAGAGAAGGTGCATGCAATCAAGGTGCAC
AGCGAGCGTCTGGCAATTGCTTATGGGTTCATAGTTACGGAAGTTGGCAACCCAATCCGTATTGTTAAGAACCTTCAGGT
GTGTGGGGATTGTCATGAATTCAGTAAGATGGTGACAAAGGTTTTCAATAGGGAGATTATTGTGAGAGATGGCAGTAGAT
TCCATCATATGAAAGAAGGGAAATGTTCTTGCCTTGACTATTGGTAGTTAATCAGCTTATAGTTTTTTGTTGTTGTTGAA
TTCAGTCATTTTGCTGGAGTCAAAGAGTTGGTGGCTGACATCAATGTTCTAGTTTGCAGCATATCCCAATTCATTTGACA
TTGGCAGCCTCCTGCTGCTTAAGTTTTCAGCTGTTTTTCTTAACCCAATACTGTAGGGGAGGCACCAACAGTAAATTCTA
TACAGTAGTTTGAGCAGTTGAGTCAAGCCAGACGCAAACGGGATCAGCAATATCAGACTTCCTTCTAAAGTAGATGAGGT
AAAGCTCCCTCTTAGAAATAAAGGACCAAGATCCTAAGCTAGAGGAGATTTTGTCGAAGATTTTCACATTCCTTTGTTTC
TGAATGGACTAGGCAACAATGATGTAAGCTTCCACGAAGAAGGGATTGTGGAAGTTTAATTTGGCAGAGGCAATCATGAT
GTAGAAGTTCCGAGATGAATTCTGGGGCAACCTTATATGATCCAGCATTCCATGTTATGAGGATAGCGCCAGAAGAGATG
ATCACT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr2B_917
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------GGATCAATGAGCTCTCGCAGTCTGTCG-------TTGTGAA
GTCCAAAACTTGGAGGCACTCGCCGCCCTGTGGTTGGCGCCGCCGTCTCCATGCCGTTGGAACAGCCTCCGCCCCCTCGG
CGCGCCCCCACCTTCCACGCGCACCCTGACGCCGACGCGAGGCAGCTCCTCGGCGCGCTCCTGCCACGGCGCGCGGCCAC
CGCCCGCCACGTCCAGCAGGCGCACGCCCGCCTCGCCGTCCTCGGCCTCGCCACCGCGCGCGTCCTCCCGCACCTCCTCG
CCGCCCTCCCCCGCCTCCCGCCGCTCCACGATGAAG------CCTCCTCCTCCTCCTACCCGCTCTC-CTGTTCCGCCGC
TCCAACTCCTCCTCCGCCTTCGCGTCCAACCACCTCCTCCGCGTGCTCCCCCACCCGCTCCCGCTCCGCCTCTTCCCCGG
CCTCCGGCGACGCAACCCCCACTCCTTCACCTTCCTCCTCTCCTCCATCTCCATCCACCTCGACGCCGGCCGCGCCGGCG
GCCCGGCCTCCTCCTC---TCTGGGCTCCCACGTGCACGCGCTGGCCGTGAAGGCGGGCGCGGCCGGCGATCTCTACGTG
CGGAACGCGCTGACGCACTTCTACGGCGTCTGCGGCGACGTGGGAGCGATGCGGAGGGTGTTCGACGAGCTGCCGCGCGT
GCGGGACGTCGTGACCTGGAACGCGGTCCTTGCCGGGTACGTCCGAGCGGGCATGGTGAGGGTTGCGCGAGAGATGTTTG
AGGAAATGCCGGTGAGAGATGAGGTTTCCTGGAGCACCGTGGTGGGCGGGTATGTGAAGGAGGGGGAGCTGGATGTGGCG
CTGGCATTGTTTAGGGATATGGTGGAGAATGGGGTCAGGGTGAATGAGGCTGCGGTGGTGACGGCATTGTCGGCGGCCGC
ACAGCTGGGTTTGCTTGAGCATGGCAGGTTTGTGCACCAGGTTGTCCATCAAGAACGGATGCCGATCAGTGTGAATATAG
GGGCTGCCATGGTGGATATGTATGCCAAGTGTGGGTGTGTAGCAGTGGCCAGGGAAGTTTTCGATGGGATGCCTAGGAGG
GATGTTTTTGCATGGAACGCCATGATCTGCGGACTTGCTGCTCATGGGTTGGGACAGGATGCAGTGGAACTCTTTGAACA
GTTTCTCGCCGAGGGTTTGAGTCCAACGAACATTACATTTGTTGGCGTGCTAAATGCCTGCAGCCGCTTTGGCCTTGTTG
CTGAGGGGCGGCGGTATTTTGAATTGATGGCTGAAAAATATAGTGTTGAGCCGGAAATGGAGCATTATGGCTGCATGGTT
GATCTTCTAGGCCGGGCTGGTCTTATTCAAGAAGCCATTGAATTGATCGAAGGGATGCCTATTGCACCTGACCCGGTTCT
CTGGGGCACTGTACTCTCGGCCTGCAAGAAACATGGCCTGGTGGACTTGGGGATCAAGGTTGGTAACAAGCTAGTTGAAC
TGGAGCCAGCTCATGATGGCCACTATGTCCTCCTTGCAAGTATTTATGCCAAGGCAAAGAAATGGGATGAAGTCAGGGAA
GTCAGGAAACTGATGTCTAGTCGGGGTACCAGTAAGTCAGCTGGCTGGAGCTTGATGGAAGCACAAGGAAACGTGCATAA
GTTTCTAGTAGGAGACAGAGATCACAAGGATTCCGTTCGGATATATAACATGCTCGACATGATTAACAGAAAGTTGGCAG
ATGCAGGGTATGTACCAGAGGTGTCGTCTGTATTGCATGACATTGGAGATGAAGAGAAAGTGCATGCAATCAAGGTGCAT
AGCGAGCGTCTGGCAATTGCTTATGGGTTCATAGTTACGGAAGTTGGCAACCCAATCCGTATTGTTAAGAACCTTCAGGT
GTGTGGGGATTGTCATGAATTCAGTAAGATGGTGACAAAGGTTTTCAATAGGGAGATTATTGTGAGAGATGGTAGTAGAT
TCCATCATATGAAAGAAGGGAAGTGTTCTTGCCTTGACTATTGGTAGTTAATCAGCTTATAGTTT----TTGTTGTTGAA
TTCAGTCATTTCGTTGGAGTCAA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>SNPs
---------------------------------------S--------------S-------S---------S-------
S---S---------S----------S-S------------------------------------------S--S------
-----------S---------SS--SS--------------------S-S--------S-------------------S-
--S--------------S---------S----------------------S--S---------------S------S---
---SS-------------S--S----------------------------------S----SSSSSSSS---SS------
---S-------------------------S----S-------S-------------SS--------S------S---SS-
--S--------S-----------------S-------------------------------------------S---S--
SSSS---S----------S--S---S-----------S-----SS-----------S--SSSSSSSSSSSSSSS--SSS-
---------S-----S----------------------S--SS-----SS--SSSSSSSSS--SSSS--SSSSSSSSS-S
SSSS---SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------------------------S--------S------S-------
SSS-------------S--S-S-------S---S--S----------------------------------------S--
----------------S-----------S---------S---S------------------S-----S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--S------S--------------------------S-------------------------------------------
----------------SSS------------------------------------------S----SS------------
--------------------------------------------------------------------------------
------------------------------S--S----------------------------------------------
-------------------S-----------------------------------------------------------S
--------------------------------S--S--------------------------S-----------------
------------------------------------------------------------------------S-------
----------------------------------S--------------S-----------S------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
------------S-------------------------------------------------------------------
-----------------------------------------------S--------------------------S-----
-----------------------------------------------------------------S--------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-S------------------------------------S------------------------S--S-------------
-----S--------------------------------S----------------------S------------------
---SS----S------------S--------------------------S----S----S--------------------
-S-----------S--------------------S-------------------------------------------S-
------S-----------------------S-SS--------------------S-----SSS-----------------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS
>forward_736
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------AAAC
CTAGAGGCGAGGAGGT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_1793
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CGTGAGGGTGAATGAGGCTG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_739
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
CTAGAGGCGAGGAGGTGAA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_2315
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AGTTCT
CTGGGGCACTGTAC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_1913
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AAGGGATGCCGATCAGTGTC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_3540
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GTCCATGAGAAGCAGCCAGT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
