>input_sequence_41174
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-------------------ATGTGTTCGACCAAATGCCGCCTCCTGCTCAGGCGGCTCCACGACCGCCATTTCTCCACCG
CCACGCCACCTAACCACCGGAAGAGCAACCCGCAAGTCACCATCCGGTGGCCGGAGCGATCCAAGCCCTCTCCTGATGCC
GGAGACACGGCGAGGGCCCATGAGGCCACCGTCAGGAGGCTCGCGGCGGCGGGCGACGTGGACGGCGTCCAGTACGCGCT
GCAGGAGATGCGGCTGCGCGGGGTGGCGTGCCCCGAGGGTGCCCTCGTCGCCGCCATCTGCGCCTTCGCCCGCGCCGGCG
CGGCCGACCGCGCGCTCAAGACGTTCTACCGCGCGCACGACCTGGGGTGCGCGGCGCCCACCGTGCGGGTGTACAACCAC
CTGCTCGACGCGCTGCTCCGGGAGAACCTGGTCGGGGCGGTGGTGCCGGTGTACGAGAACATGAGGGAGGCCGGCGTCGA
GCCCAACGTGCACACCTACAATCTGCTCATGAAGGCGCTGTGCCAGAACGACCGGGTCGACGCCGCACGCAAGATGCTCG
ACGAAATGGCCAGGAAGGGCTGCCAGCCAGACGTGGTGAGCCACACGACGATCGTTTCTGCGCTTTGCAAGTTGGGAAGG
GTGGACGAGGCCAGGAGGGTCGTGGCAGAGACAGTGCCTGTGTGCTCCTCGTACAATGCCGTTGTTCACGCGCTGTGCAG
GCAGTTCAGGATGCGGGAGGTGCTCTCGGTTATCGACGAGATGATTCACCGGGGACTGCACCCAGAACCTGCTACCTACA
CAAGCATAGTCGATGCACTCTGCAAGGCTGGGGAGATGAAGATGGCTTGCGCCATTTTGGCTAGGATGGTAAGCGAAGGT
TGTGCTCCAAATGTTCAAACATTCACTGTGTTGGTCAAAGGATTCTTCGATGCCGGAAAGGCGCATGACGCGATTGGCAT
GTGGAATTGGATGGTGGCTGAAGGATGGGCACCAACGACAATCTCTTACAATGTTCTCATCCGTGGCCTTTGCCACACTG
GTGATCTTAAGAGGGCATCGTCTGTTTTCAGTGGCATGGAGCAAAACGGTTGTTTTCCTGATGTAAGGACCTATTCTACT
CTCATTGACGGATTCTCCAAAGCTGGGGACCTAGATGGTGCCATGTCAATATGGAATGACGTGACAAATGCTGGTTTCAA
GCCAAACGTTGTTGTTTATACAAATATGGTGGATGTGCTTTGCAAGAAGGCGATGTTTGATCAGGCAGAGAATCTCATTG
ATAAGATGTTGATGGAAAATTGTCCTCCTAACACATTGACATTCAACACGTTGATCAGAAGCCTGTGTCACTGCGGAAGA
GTGGGAAGAGCCTTGAGTGTGTTCCATGGTATGGGAAGATATGGATGCTCTCCAAACGACAGGACTTACAATGAGTTGCT
TCATGGTCTTTTCAGGGAAGGAAACTGCGAAGACGCTCTTCGAATGCTGATCCAGATGCTAAACCATGGGCTTGAGTTGA
CTCCAGTATCTTACAACACTACTATTAGTGGTCTGTGCCAGATGGGAAGGAACAAAGAAGCTATAATTCTTCTCGGGAGG
ATGATAGTCCAACAAATTCAACCAGATGCATTCACTTTCAATGCGATAATTCATGCTTACTGCAAGGAAGGGAATGTCAA
GGCTGCTGCTTGGATGTTAGGTCAAATGGTTGCAGTTAATTGTCCACGCAACATAGTTGCATACACAAGTCTGATGTCAG
GGCTTTGCAGTCAGCACAGGTTGGATGATGCCATGGTCTATCTCTTGAAGATGTTATATGAAGGAATATGTCCAAATGAA
GCAACATGGAATGTGTTGGTCCGTGGGATATTTACACACATGGGCACCATCGGACCAATGCACTTGATTGAGCATATTTA
TGAAGATTTATAA-------------------------------------------------------------------
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-----------------------------------------------------------------------------
>chr1A_1_TraesCS1A01G074900
TTGTCTGCGTCTTATTCATGCTGATGAAGCGAACGTGGCCCGACAGGGCAGACGACTACCCGCGC-TAATGTCGGTTAAT
CGGCCGTCCGCCTACCCGACATTCACATAGTGAACCCGCCCTTAAGCTTTTTGAAGTCGTTTTAGCCGCCCGAGGGTGGA
AACCACCGCTCATTGTTGTCGTTAGGAAAGAAGAATATTCTTCACCTTGCAGAGGAACATGTAA---------GACGACG
ATTCAACTGGTGAAGACCCACCTCCACTTGCTCCTTGTCGACGGTAAACA-ACACAGTGCTAGAAGGGACAAAGCCCAGA
TAACATATTCAACGAAGAGGTCATTGCTGCCATATCAACTCCTTACTCTAATCTTTGCCTCTTAGCCACTTCTCTCACCC
GAAACGAGTTTCTCTTAGGTACTCCTTTTGTCGTATAAATATAAG--------------------------ATGTTATTA
CAATGATTGAGGAGAAGGATCGTTCGCCAGGGGCAGCCTTGGTTGAGGAGATCAAACGTCTATTGAACATGGGCAGGGAG
CACGCCATATCCATGATATGTTGCTCTCGTAATTCGGTCGCTCATAACTTAGCTCGAATGTGGCATAATTCTACTCGCAC
TGCTGTTTGGTTGAGGTCCGTTTCTCAAGAAATTCTTGTGCCGACTCAAAATGATTTGTAATCATCATGATTAAGCAATG
AATTTCTTTCTCCAGTAAAAACACAACTTATATTATAGGACTATAAGAAAGTAGGACGGAAGGCTTCTCGGATGTCTCCC
ACTGCCCATACTTTGAGTTTGTTTTTTC------------------------TTTTGAGAAATCCTGAATTTTTTAGATA
A--------------------TTTTTTCTGTTGATTATTTTTTTGAGAATCGTTTTTTCTTTTGAT--------------
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------GAGAACGAGTTCGTGTCAGTTTGAATTAGGCTGG-----GCTTCAAAACCAGGCCCAAACA-------------
----------------TTAGGCGGCCTGAAG--TACCCGTGGCTTACACAAACGGGGCCACTACTCT--GTTTGACCGTC
GAAGTTTTAGCTGCGCGCCATGTGTTCGACCAAATGCCGCCTCCTGCTCAGGCGGCTCCACGACCGCCATTTCTCCACCG
CCACGCCACCTAACCACCGGAAGAGCAACCCGCAAGTCACCATCCGGTGGCCGGAGCGATCCAAGCCCTCTCCTGATGCC
GGAGACACGGCGAGGGCCCATGAGGCCACCGTCAGGAGGCTCGCGGCGGCGGGCGACGTGGACGGCGTCCAGTACGCGCT
GCAGGAGATGCGGCTGCGCGGGGTGGCGTGCCCCGAGGGTGCCCTCGTCGCCGCCATCTGCGCCTTCGCCCGCGCCGGCG
CGGCCGACCGCGCGCTCAAGACGTTCTACCGCGCGCACGACCTGGGGTGCGCGGCGCCCACCGTGCGGGTGTACAACCAC
CTGCTCGACGCGCTGCTCCGGGAGAACCTGGTCGGGGCGGTGGTGCCGGTGTACGAGAACATGAGGGAGGCCGGCGTCGA
GCCCAACGTGCACACCTACAATCTGCTCATGAAGGCGCTGTGCCAGAACGACCGGGTCGACGCCGCACGCAAGATGCTCG
ACGAAATGGCCAGGAAGGGCTGCCAGCCAGACGTGGTGAGCCACACGACGATCGTTTCTGCGCTTTGCAAGTTGGGAAGG
GTGGACGAGGCCAGGAGGGTCGTGGCAGAGACAGTGCCTGTGTGCTCCTCGTACAATGCCGTTGTTCACGCGCTGTGCAG
GCAGTTCAGGATGCGGGAGGTGCTCTCGGTTATCGACGAGATGATTCACCGGGGACTGCACCCAGAACCTGCTACCTACA
CAAGCATAGTCGATGCACTCTGCAAGGCTGGGGAGATGAAGATGGCTTGCGCCATTTTGGCTAGGATGGTAAGCGAAGGT
TGTGCTCCAAATGTTCAAACATTCACTGTGTTGGTCAAAGGATTCTTCGATGCCGGAAAGGCGCATGACGCGATTGGCAT
GTGGAATTGGATGGTGGCTGAAGGATGGGCACCAACGACAATCTCTTACAATGTTCTCATCCGTGGCCTTTGCCACACTG
GTGATCTTAAGAGGGCATCGTCTGTTTTCAGTGGCATGGAGCAAAACGGTTGTTTTCCTGATGTAAGGACCTATTCTACT
CTCATTGACGGATTCTCCAAAGCTGGGGACCTAGATGGTGCCATGTCAATATGGAATGACGTGACAAATGCTGGTTTCAA
GCCAAACGTTGTTGTTTATACAAATATGGTGGATGTGCTTTGCAAGAAGGCGATGTTTGATCAGGCAGAGAATCTCATTG
ATAAGATGTTGATGGAAAATTGTCCTCCTAACACATTGACATTCAACACGTTGATCAGAAGCCTGTGTCACTGCGGAAGA
GTGGGAAGAGCCTTGAGTGTGTTCCATGGTATGGGAAGATATGGATGCTCTCCAAACGACAGGACTTACAATGAGTTGCT
TCATGGTCTTTTCAGGGAAGGAAACTGCGAAGACGCTCTTCGAATGCTGATCCAGATGCTAAACCATGGGCTTGAGTTGA
CTCCAGTATCTTACAACACTACTATTAGTGGTCTGTGCCAGATGGGAAGGAACAAAGAAGCTATAATTCTTCTCGGGAGG
ATGATAGTCCAACAAATTCAACCAGATGCATTCACTTTCAATGCGATAATTCATGCTTACTGCAAGGAAGGGAATGTCAA
GGCTGCTGCTTGGATGTTAGGTCAAATGGTTGCAGTTAATTGTCCACGCAACATAGTTGCATACACAAGTCTGATGTCAG
GGCTTTGCAGTCAGCACAGGTTGGATGATGCCATGGTCTATCTCTTGAAGATGTTATATGAAGGAATATGTCCAAATGAA
GCAACATGGAATGTGTTGGTCCGTGGGATATTTACACACATGGGCACCATCGGACCAATGCACTTGATTGAGCATATTTA
TGAAGATTTATAAGAG-----CTAGAGAACTTCGACAAACCTCAGGCACCATCAGACCAACGTACTTGATTGAGCATATC
ATTGAAGATTTATAAGCATGTACTT-GACAGTCCAGTGGTGCTATAATCGGACAAGCAGCAAGTTCTCTTTGATAGTTCA
TGAGGTATGCTATTTCTGATAATACTAATGATCTTTTGATGTT-------------------------------------
--------------------------------------------------------------------------------
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------ATAAATATATGTCTCAAGGATTCATCAGAGGCACCATTCAAATTTGCAAGCTGCTATCTTCAGTTTGGTCAGTA
TGTAATATGTGCATGATGAATATATTTTGGGACATAACAAT---ATAGTCTGGGACTGAGTCGATCATGTTCTCCCTTGC
ATATTGGCCCTCGCGTAGTCATTAGAAGGACTTCATTCCTAATTTTTTCCACTGTACCATCCCTTTGTTTCAACAGGGCG
CACACGACATTAATAAAAATTGTCCGTTGGTCAAAATACGCGGCCTAGCACAAAAATCTGTTTTAATTGTTATCTGTGCG
CCATATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATACATACACAA
TGCAC--------------------------------------------------CACACAATATGCATT--ATTGCTTT
TATGTAGTCTTGATTACCAACGTCGTTCAATAGTAGATTTACAATAATATTCCGGCATGTGACCTAACAAAACACATAGC
TTTACTTTGCTTTGTTCGCAGCCCTCTGACCCTCCAATGCTTTGTATAATTTGTCAATCTCAGGCTGCACATGAAGA
>chr1D_4
---TCTGCGTCTTATTCATGCCGATGAAGCGAACGTGGCTAGACAGGGCGGCAAGGCTACTCGCATTAATGTCGGCTAAT
CGGCCGTCGGCCTACCCGACATTCACAGAGTGAACCCGCCCTTAAGGTTTTTGAAGTCGTTTGAGCCGCCCGAGGGTGGA
AACCACCGCTCATTGTTGTCGTTAGGAAAGAAGAACATTCTCCACCTTGCAGAGGAACATGTATAACATGTATGACGAAG
ATTCAACTGGTGAAGACCCACCTCCACTTGCTCCTTGTCGACGGTAAACAAACACAGTGCGGGAAGGGACAAAGCCCAGA
TAACTTATTCAACGAAGAGGTCATTGCTGCCATATCAACTCCTTACTCTAATCATTGCCTCTTAGCCGCTTCTCTCACCC
CAAATGAGTTTCTCTTAGGTACTCCCTTTGTCGTATAAATATAAGATGTTATTACAGCGTATAAATATAAGATGTTATTA
CAATGATTGAGGAGAAGGATCTTTCGCCGGGGGCAGCCTTGGTTGTGGAGATCAAACGCCTACTGAA--------GGGAG
CACACCATATCTGTGATACGTCACTCTCGCAATTCGGTCGTTCATAGCTTAGCTCAAATGGGACATAATTC-ACTCGTAC
TGATGTTTGGTTGAGGTTTGTTCCTCAAGAAATTCATGTGTTGACTCAAAACGTTTTGTAATTATCATGATTAAGCAACA
AAATTCTTTTTCTCAT-AAAAAGCAACTTATATTATAGGACG--GAGGGACTAGAACGGAAGGCTTCTCAGATGTCTCTC
GCTGCCCATACTTTGAGTTCGTTTTTTC------------------------TTTTGA----------ATTTTTTAGATA
GTTTTTTAGGTAAAGATAGTTTTTTTTCTTTTGATTATTTTTAGGGGGGAAAGCTAAGTTTTATTAATCAAAAGCCACTT
GAAGCGGGATACAATAAGGATCGTGGAGGTGAAACCAAACATGGCGCCCCTTGTCAGAGAATTCGGAAACTTAGCTAAAC
TATCTACTTCTTTATTTGCCATTCATTCTTTGAAGGTAAATTTGCAGTTAAGATTGACCGCTCGCTGCTTGCACTCTCTT
GCGACACTCTCATAGTTGCCGCTAGGGTTGCCAACACTTTGATTAACTTGGACATTAAGAGGGATACAAGCTGGGTCATG
CGGAGAGAAAAGCCACAAGTGGCGACCCTGATCAAGCAACAAAGAGTGTTTGGCAAGGTTCTTCGATCAAGTTTTGAATG
ACTTTCTAGTCAGATCGTTCCTGCGTTTCGGATATCCAGTCTCATTCGAAGCTTTAGACAAGGGTGCTATTGAGATATTG
GGCCCTTATGGTATCTCGTACACATTCCGACGATTCGATTCATCTCAATCTTGAAGGAAGAGATCGAGGATTCCAAGTTC
TTTTACCCCACTCAGAAAAAGTTTTCCGCCGGACGACTCGTAGGGGGTGAGAAGGGCCCTGACTCCATCCCAAACAGTGT
ACTACTATCGGCCCTACCAGGCAATATCTACCTACACAAGCTCGATCCATCAATATTCGATGCTCTACTTTTTTATAAAT
AAAGGAGAGAATGAGTTCGTGTCAATTTGAATTAGGCTGG-----GCTTCAAAACCAGGCCCAACATTGGGCCTTTGAGA
GACCG-CCGATCCAATTTAGGCGGCCTGAAGGGTACCCGTGGCTTACACAAACGCGGCCCCTACTCTCTGTTGGACCTTC
GAAGTTTTGGCTGCGCGCCATGTGTTCGACCAAATGCCGCCTCCTGCTCAGGCGGCTCCACGACCGCCATTTCTCCACCG
CCCCGCCACCTAACCACCGGAAGAGCAACCCGCAAGTCACCATCCGGTGGCCGGAGCGATACAGGCCCTCTACCGATGCC
GGAGACACGGCGAGGGCCCATGAGGCCACCGTCAGGAGGCTCGCGGCGGCAGGCGACGTGGACGGCGTCCAGTACGCCCT
GCAGGAGATGCGGCTGCGCGGGGTGGCGTGCCCCGAGGGGGCCCTCGTCGCCGCCATCTGCGCCTTCGCCCGCGCCGGCG
CGGCCGACCGCGCGCTCAAGACGTTCTACCGCGCGCACGACCTGGGGTGCGCGGCGCCCACCGTGCGGGTGTATAACCAC
CTGCTCGACGCGCTGCTCCGGGAGAACCTGGTCGGTGCGGTGGTGCCGGTCTACGACAACATGAGGAAGGCCGGCGTCGA
GCCCAACGTGTACACCTACAACCTGCTCATGAAGGCGCTGTGCCAGAACGACCGGGTCGACGCCGCGCGCAAGATGCTCG
ACGAAATGGCCAGGAAGGGCTGCCAGCCAGACGCGGTGAGCCATACGACGATCGTTTCTGCGCTGTGCAAGCTGGGCAGG
GTGGACGAGGCCAGGAGGGTCGTGGCAGAGACGGTGCCTGTGTGCTCATCGTACAATGCCGTCGTTCACGCGCTCTGCAG
GCAGTTCAGGATGCTGGAGGTGCTCTCGGTTATCGACGAGATGATTCACCGGGGACTGCACCCAGAACCTGCCACGTACA
CAAGCATAGTCGATGCGCTCTGCAAGGCCGGGGAGCTGAGGATGGCTTGCGCCATTTTGGCTAGGATGGTAACCGAAGGT
TGTGCTCCAAATGTTCAAACATTCACTGTGTTGGTCAAAGGGTTCTTCGATGATGGAAAGGCGCATGACGCGATTGGCAT
GTGGAATTGGATGGTGGCTGAAGGATGGGCACCAACGACAATCTCTTACAATGTTCTCATCCGTGGCCTTTGCCACACTG
GTGATCTAAAGAGGGCATCGTCTGTTTTCACTGGCATGGAGCAAAACGGTTGTTTTCCTGATGTAAGGACCTATTCTACT
CTCATTGACGGATTCTCCAAAGCTGGGGACCTAGATGGTGCCATGTCAATATGGAATGACATGACAAATGCTGGTTTCAA
GCCAAACGTTGTTGTTTATACAAATATGGTGGATGTGCTTTGCAAGAAGGCGATGTTTGATCAGGCAGAGAATCTCATTG
ATAAGATGTCGATGGAAAATTGTCCTCCTAACACATTGACATTCAACACCTTGATCAGAAGCCTGTGTGAATGCGGAAGA
GTGGGAAGAGCCTTGAGTGTGTTCCATGGTATGGGAAGATATGGATGCTCTCCAAACGACAGGACTTACAATGAGTTGCT
TCATGGTCTTTTCAGGGAAGGAAACTGCGAAGACGCTCTTCGAATGCTGATCGAGATGCTAAACCATGGGCTTGAGTTGA
CTCTAGTATCTTACAACACTACTATTAGTGGTCTGTGCCAGATGGGAAGGAACAAAGAAGCTATAATTCTTCTCGGGAGG
ATGATAGTCCAACAAATTCAACCAGATGCATTCACTTTCAATGCGATAATTCACGCTTACTGCAAGGAAGGGAATGTCAA
GGCTGCTGCTTGGATGTTAGGTCGAATGAATGCAGTTAATTGTCCACGCAACATAGTTGCATACACAAGTCTGATGTCAG
GGCTGTGCAGTCAGCACAGGTTGGATGATGCCATGGTCTATCTCTTGAAGATGTTATATGAAGGTATATGTCCAAATGAA
GCAACATGGAATGTGTTGGTCCGTGGGATATTTACACACATGGGCACCATCGGACCAATGCACTTGATTGAGCATATTTA
CGAAGATTTATAAGAGTAGCCCTAGAGAACTTCGACAAACCTCAGGCACCACCAGACCAACGTACTTGATTGAGCATATC
ATTGAAGATTTATAAGCATGTACTCGGACAGTCCAGTGGTGCTATCATCGGACAAGCAGCAAGT-CTCTTTGATAGTTCA
CGAGGTATGCTATTTCTGATAATACTAATGATCTTTTGATGTT-------------------------------------
--------------------------------------------------------------------------------
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------ATAAATATATGTCTCAAGGATTCATCAGAGGCACCATTCAGATTTGCAAGCTGCTATCTTCAGTTTGGTCGGTA
TGTAATATGTGCATGATGAATATACTTTGGGACATAACGAT---ATAGTCTGGGACTGAGTCGATCATGTTCTCCCTTGC
ATATTGGCCCTCGCGTAGTCTGGCGT------------------------------------------------------
-ACACGACATTAATAGAAATTGTCCGTTGGTCAAAATACGCGGCCTAGCACAAAAATCTGTTTTAATTGTTATCTGTGCG
CCACACATGTAAATTTCAAAGAGTGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACAATATGCATTTTATTGCTTT
TATGTAGTCTTGATTACCAAC---GTTCAATAGTAGATTTACAATAGTATTCCGGCATGTGACCTAACAAAACACATAGC
TTTACTTTGCTTTGTTCGCAGCCCTCTGACCCTCCAATGCTTTGTATACTTTGTCAATCTCAGGCTGCACATGAAGA
>chr1B_685
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-ATTTCTTTCTCCCGTAAAAGAGCACAAC---TTGTAGGGCG--AAGGAAGTAGGAAGGAAGGCTTCTCGGATGTCTCTC
GCTGCCCATACTTTGAGTTCGTTTTTCCTTTTTTTTAAGATTCTTTTAGGGGTTTTGA----------ATTTTTTAGATA
GTTTTTTA--------------------TTTTGATTTATTTTAGGGGGAGTC--TTTTCTTTGGAT--------------
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------GAGAACGAGTTCGTGTCAGTTTGAATTAGGCTGGGCTGGGCTTCAAAACCAGGCCCAACATTGGGCCTCTGATA
GACCGCCCGATCCAATTTAGGCGGCCTGAAG------CGTGGCTTACACAAACGGGGCCACTGCT---TGTTCGACCTTC
GCAGTTTTGGCTGCGCGCCATGTGTTCGACCAAATGCCGCCTCCCGCTCAGGCGGCTCCACGACCGCCATTTCTCCACCG
CCCCGCCACATAACCACCGGAAGAGCAGCCCGCAAGTCACCATCCGGTGGCCGGAGCGATCCAGGCCCTCTCATGACGCC
GGAGACACGGCGAGGGCCCATGAGGCCACCGTCAGGAGGCTCGCGGCGGCAGGCGACGTGGACGGCGTCCAGTACGCGCT
GCAGGAGATGCGGCTGCGCGGGGTGTCGTGCCCCGAGGGGGCCCTCGTCGCCGCCATCTGCGCCTTCGCCCGCGCCGGCG
CGGCCGACCGCGCGCTCAAGACGTTCTACCGCGCGCACGACCTGGGATGCGCGGCGCCCACCGTGCGGGTGTACAACCAC
CTGCTCGACGCGCTGCTCCGGGAGAACCTGGTCGGCGCGGTGGTGCCGGTGTACGACAACATGAGGAAGGCCGGCGTCGA
GCCCAACGTGTACACCTACAACCTGCTCATGAAGGCGCTGTGCCAGAACGACCGGGTCGACGCCGCGCGCAAGATGCTCG
ACGAAATGGCCAGGAAGGGCTGCCAGCCAGATGAGGTGAGCCAAACGACGATCGTTTCTGCGCTGTGCAAGCTGGGCAGG
GTGGACGAGGCCAGGAGGGTCATGGCAGAGACGGTGCCTGTGTGCTCCTCGTACAATGCCGTCGTTCACGCGCTCTGCAG
GCAGTTCAGGATGCGGGAGGTGCTCTCGGTTATCGACGAGATGATTCACCGGGGACTGCACCCAGAACCTGCCACCTACA
CAAGCATAGTCGATGCGCTCTGCAAGGCCGGGGAGCTGAGGATGGCTTGCGCCGTTTTGGCTAGGATGGTAACCGAAGGT
TGTGCTCCAAATGTTCAAACATTCACTGTGTTGGTCAAAGGGTTCTTTGATGCTGGAAAGGCACACGACGCAATTGGCAT
GTGGAATTGGATGGTGGCTGAAGGATGTGCACCGTCGACAATCTCTTACAATGTTCTCATCCGTGGCCTTTGCCACACTG
GTGATCTAAAGAGGGCATCATCTGTTTTCAGTGGCATGGAGCAAAACGGTTGTTTTCCTGATGTAAGGACCTATTCTACT
CTCATTGACGGATTCTCCAAAGCTGGGGACCTAGATGGTGCCATGACAATATGGAATGACATGGCAAATGCTGGTTTCAA
GCCAAACGTTGTTGTTTATACAAATATGGTGGATGTGCTTTGCAAGAAGGTGATGTTTGATCAGGCAGAGAATCTCATTG
ATAAGATGTCGATGGAAAATTGTCCTCCTAACACATTGACATTCAACACGTTGATCAGAAGCCTGTGTGACTCCGGAAGA
GTGGGAAGAGCCTTGAGTGTGTTCCATGGTATGAGAAGATATGGATGCTCTCCAAACGACAGGACTTACAATGAGTTGCT
TCATGGTCTTTTCAGGGAAGGAAACTGTGAAGACGCTCTTCGAATGCTGATCGAGATGCTAAACCATGGGCTTGAGTTGA
CTCTAGTATCTTACAACACTACTATTAGTGGTCTGTGCCAGATGGGAAGGAACAAAGAAGCTATGATTCTTCTCGGGAGG
ATGATAGTCCAACAAATTCAACCAGATGCATTCACTTTCAATGCGATAATTCATGCTTACTGCAAGGAAGGGAATGTAAA
GGTTGCTGCTTGGATGTTAGGTCGAATGGATGCAGTTAATTGTCCACGCAACATAGTTGCATACACAAGTCTGATGTCAG
GGCTGTGCAGTCAGCACAGGTTGGATGATGCCATGGTCTATCTCTTGAAGATGTTATATGAAGGTATATGTCCAAATGAA
GCAACATGGAATGTGTTGGTCCGTGGGATATTTACACACATCGGCACCATCGGACCAATGCACTTGATTGAGCATATTTA
TGAAGATTTATAAGTGTAGCCCTAGAGAACTTCGACAAACCTTGGGCACCATCAGACCAACGTACTTGATTGAGCATATC
ATCGAAGATTTATAAGCATCTACTCGGACAGTCCAGTGGTGCTATCATTGGACAAGCAGCAAGTTCTCTTTGATAGTTGA
CGAGGTATGCTATTTCTGATAATACTAATGATCTTTTGATGGTACTAGCAAGATGCCCGTGCATTGCACGGAACATCAAG
GTGCATTTTTTTACAAAGCACCTGTTGTGGTTGACCCATACGGGAGTAATCTCATGTGTATAAACTAATGATATCTCGAG
AAAGAGGAGAGATAAGGTGAGGAGGAGTGGGGCGTGGTGGTGATTGGTGGTCGGACTGAGCGGAAGCATGGGGATGGACG
ACGCCAGCAGCGGCCACGCCAGATTGTTTCAGAGGTTTCCTTTTTTAATTGCTCAACAATGATGCTGTGGGAGATAAGGA
TGAACGAAGGAAGGCCTTATCTGTAAATGTGGAGAGAGGTGCGGGTATCTTTTTGTAAAATTGCCATAGTTTGCTTTCTA
TCCGTTAGATATAGATCGGACGATCTATATTGCAAGATGGCAGGCACACCATCATCACCAACTCGTTTTTTTTATAACAA
GTAGAGATAATTATATGTCTCAAGGATTTATCAGAGGCACCATTCAAATTTGCAAGCTGTTATCTTCAGTTTGGTCAGTA
TGTAATATGTGCATGATGAATATATTTTGAGGACATATCGATACATAGTCTGGGACTGAGTCAATCATGTTCTCCCTTGC
ATATTGGCCCTCGCGTAGTCATTAGAAGGACTTCATTTCTAATT-TTTGCACTGTAGCATCCCTTTGTTTCAACGGGGCG
CACCCG------ATAGAAATTGTCCGTTGGTCAAAATACTTGGCCTAGCACAAAAATCTGTTTTAATTGTTGTCTGTGGG
CCACATATGTAAATTTCATAGTGGGGCGGATTTTTTGGGGGGAGGGAGCGGGGCGGGGGGG-------------------
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-------------------------------------------------------------------TATACATACACAA
TGCAC--------------------------------------------------CACACAATATGCATTTTATTGCTTT
-ATGTAGTCTTGATTACCAAC---GTTCAATAGTAGATTTACAATAGAATTCCGGCATGTGACCTAGCAAAACACATAGC
TTTACTTTGCTTTGTTCGCAGCCCTCTGACCCTCCAATGTTTTGTATACTTTGTCAATCTCAGGCTGCACATGAAGA
>SNPs
SSS------------------S-----------------SS--------S-SSSSSSSS-SSSSS----------S----
--------S------------------S------------------S---------------S-----------------
-----------------------------------S-----S---------------------S--------------S-
------------------------------------------------------------SS------------------
----S------------------------------------------------S-------------S------------
S---S--------------------S------------------------------------------------------
---------------------S------S----------------S------------S---S----SSSSSSSS-----
---S-------SS-----S--SS------S----------S-----S--------S----S-S--------S-----S--
--S--------------SS---S------------S----SS---------S-S--------S---------------SS
-------------S-------SS------------------SSS---S------------------------------S-
S------------------S--------------------------------------SSSSSSSSSS------------
S----------------------------S------------SS-S-S-SSSSS--------S-----------------
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----------------------------------------------------------------SSS-------------
------------------------------------------------------------------------S----S--
--------S-----------------------------------------------------------------------
--S------------------------------------------------------------S----------------
--------------------------------------------------S-----------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------S---------S-------------
----------S----------S--------------------------------------------S-------------
---------------------------------S---------S--------------------S------S----S---
--------------------------------S-----------------------------S-----------S-----
------------------------------------------------------------------------S-------
----------------S-----------S------S---S--------------------------------S-------
-----------------------------------------S-----------S--------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------S-----------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
---S----------------------------------------------------------------------------
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-----------------------S-----S--------------------------------------------------
----S-----------------------------------------------------------S---------------
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------------------------S--------------------S----------------------------------
S-------------------------------------------------------------------------------
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--------------------------------------S-----------------------------------------
-------------------------------------S------S---S-------S-----------------S-----
---------------S----------------------------------------------------------------
---S--SSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------------
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------------------------------------------------------------------S-------------
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---------------------SSS----------------------S---------------------------------
------------------------------------------------S----------------------------
>forward_108
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--------CGCCTACCCGACATTCACAT----------------------------------------------------
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>reverse_2633
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------------------------------------------------------------------------GCGAAGGT
TGTGCTCCAAAT--------------------------------------------------------------------
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>forward_127
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---------------------------TAGTGAACCCGCCCTTAAGC---------------------------------
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>reverse_2682
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ATTCTTCGATGCCGGAAAGG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_1665
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GCTTCAAAACCAGGCCCAAA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_3109
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CACTGCGGAAGA
GTGGGAAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_2463
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GCTCCTCGTACAATGCCGTT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_4555
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AGGGCG
CACACGACATTAAT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
