>input_sequence_41157
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-----------------------------------------ATGGAGTATGCTAATTTACGACGCCAAGCAGCATCCTTG
AAAAGGAGCCTCTTTGATCAGGCTTGTGCTCTGTTCATCTCATACATTAAGCATCAGAGTTCATGCAGTAAACACTTGTC
ATGTTTTCTTTACAGAGCCAAGACAAGAATTGTCACTTTGCACCTCTGTTTCAAACTTTGACACACCTTAGAAAAATCTG
AATGAAGCACA-AATATTGAATAAGTTTGCTACCATGCAGTGCTTAAATTCCACTTTTTCTTTATTTTCAGCAATGCTTT
AAGAATACTT----TTTAA-CCATTTTGGAACTCTCCTTTTCTGCTACTTATCTTATTCTAATGTGCGTTGATATGGATA
TGTGCTGATTTAGCTAATCATATTTGGTAACAGGGGTATTTGGATGAGCAATTTTGCCAGGTTGAGGACTTGCAGGATGA
AGCAAGCCCCAATTTTGCAGAAGAAGTGGTCTCCTTGTTCTTCAAGGACTCAGCGAGGCTAGTGACAAACATTGAGCAAG
CTATGTAAGCAATGGCACTTCCATAAACTTGGTCAATTGTTGTTAAGCAGTATCTAACAACAACACTGCAGGGAGAAGTA
TCCCAAAGATTTCAATAGATGGGATGCACACATGCAGCAGCTTAGAGGCAGCTGTTTTAGGTATGTCCAGACAGTCAAGT
TTGAATATCTTTAGGCAATAGATGATTACATGTTGCATGCCTATGTGAAAGAAATTCGTGGTGGACTCTTAGAGGCTGTT
GAATTTGTTGCCCTTTTAGGCAAATTCTTGACTGGTCTTGATTACCTATTGGGCGGGACCCCTGCTTTTGCCAACAAACT
GGTCAGCTTGGATTAGAAAGCCATCACCTGTTGAAGGATAGACGTGCATGGCTAAACTCAGTTTCGTGGGTGAAAAGTGA
TAATTGTTTGGTTTTGTAAAAAAAAA-----AAGTTTGCAGAAGTTAATCTGAACCTTTGACTACTACCAGAAAATAATG
GATAGGAAAATTGCCAAACGAGCTGTTGACTATTTGTTTCATGAGCCACCAGAAAGCTCCTGTAGCACAGTGCTTCTAGA
TATCAGATGTGTCTCAACACTGCATGTTTGTGTCCTCAATTCTCGAAACCATGTTTTTTTGCCGTCCTCAATTCTTGAAA
CAGTGCCTTGTTTACTTCTTTTTTTTGCTTGGTGGTGCTTCTACGTTTTTGTTTTACTTTAAGTGCCTCAGCGAATGTGT
ACACCAGAGTTTTTCTTTTTCTTGACAGAGATCTCCTAACGCAGAGATTTATATTGCTTTCACCATGCAGTACTAATCAT
GTGCGTCCATTTTACAACTAGATGTTGGATGCATGTGGAGTAGCAAACATTGGCCTTTTACAAATGATGATATGTATCAT
GAGATGACATGCTTGCAGCTCCTTTGCCATGATATAAAGAGCTGACATTTTGCATTTCTTATA-TACTACTCTGCTGTAA
AGTTTTGGGCTTAAGCTTAACATA-TACAACTTGCCACAGCATCGGCGCTTCTAAGATGAACAATGAGTGCACATCTTTC
AGGAACAGCTGTGGAGAAGAAAATGCTGAAGGGTATCTCTCTCTCTCTCTC------------------T----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CCTGCTTAATTAGTTGG
TTAGCATGTCGACATGTGGTTTAATATCCAAAGCATACAGGTTAATCGCTACCGACGCGTCTTCTTTCATCCATATTAAT
ATATTATTATGCAGTTGCAGGAGAACTTTCCAGAAAGTGAAGAGGGAGCATGCTATTCTGAGGCAGAAGCTGGAGTCCTA
CTTCCAGGTAATCTTCATGAATCAAT----------------------CATCACTCTGTGTATCCGATCTCGCCATGTGT
TCTAACAACATGACATGGCCACACACAGCTGCTGCGACAAGCCGGTCCTGCCAGGACCGCGACCAGGCCTGGAAGCATGT
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr1D_1_TraesCS1D01G343900
TTCTCTACCTTTCTTTGGGCTGAGCACAAAGTAGGCATATCTTAGACCTATTCGAATTCTCTATCGTTCTCGATGATTTT
ATCACCACATTATGCTTGAACTTTGAGATGAACAAACACTTGTTTTGTTATACCATTCCCCTTATGTCCGTGTATTAGTT
CCTGCAACGTGTCACTCTAGAAAATTTCCTCTATCAGGACAGTTCATATATCCAGACATGACAAATGTTCATTTCCTGTA
AGAATGAGCCACCACATGAAACATTTTATGTGATCAAGTAATATTCTTTCTATTCATTGTCTTGATTCTCGGACTCCAGT
ATGCTCAGACCGAGGCATGTATACATGAACCCATGTAAATGTTCCTCACCGGAAAAAGAGAATGCTGTTTTGTTTCGCCC
TTGATGAATGACCATTGA-TTCCTTCTTCCCAATTTAGTCTGATAATGTCAAGCCTTGAGAAAGTTGTTAGAATTTAGAA
CTTGTCAGAAGCTATCACATGCAGATGCTGACCTGTATCTGATTATGTGATAAGTATTGTTTTTTTATTTACCTTTTTAC
CTTCTTCTGGAGTTTGTTCTTCAGGTTTGCAGATGTCAAATTTGTATGCTCGATGATGTGCGATGTAGAAAAAATGGACT
GAAGGTAGTAACCCATCTGCATAGACCAAAGAAGAAAGGTTTGGGTTTCTACACGCCAATATAAAGGAGGAGCATCACAG
TCTGTTGATGTTCAAGTCATTCTCCAAAATGTGAATAGATGCTGCACACGCTGCAACAAAACCATTGGCATATGTAAGAT
GATAAGGCTTTGCCATCGGAACTTCAAAATATCTTCACTTCCACTTATGTTGGTGGAGGAACAGTGAAGCCTCCGAAGCT
ATATAAACAACCTGATGTTCAACTTTCTACAAGCAGAGAGATGGACCAGTTGGATATGCATTTTGTGCTTGCCTCCCACA
GCCCCTGCTTAGCCTCTTTTCCCATCATTCAACACTTGTAAATGGAGTATGCTAATTTACGACGCCAAGCAGCATCCTTG
AAAAGGAGCCTCTTTGATCAGGCTTGTGCTCTGTTCATCTCATACATTAAGCATCAGAGTTCATGCAGTAAACACTTGTC
ATGTTTTCTTTACAGAGCCAAGACAAGAATTGTCACTTTGCACCTCTGTTTCAAACTTTGACACACCTTAGAAAAATCTG
AATGAAGCACA-AATATTGAATAAGTTTGCTACCATGCAGTGCTTAAATTCCACTTTTTCTTTATTTTCAGCAATGCTTT
AAGAATACTT----TTTAA-CCATTTTGGAACTCTCCTTTTCTGCTACTTATCTTATTCTAATGTGCGTTGATATGGATA
TGTGCTGATTTAGCTAATCATATTTGGTAACAGGGGTATTTGGATGAGCAATTTTGCCAGGTTGAGGACTTGCAGGATGA
AGCAAGCCCCAATTTTGCAGAAGAAGTGGTCTCCTTGTTCTTCAAGGACTCAGCGAGGCTAGTGACAAACATTGAGCAAG
CTATGTAAGCAATGGCACTTCCATAAACTTGGTCAATTGTTGTTAAGCAGTATCTAACAACAACACTGCAGGGAGAAGTA
TCCCAAAGATTTCAATAGATGGGATGCACACATGCAGCAGCTTAGAGGCAGCTGTTTTAGGTATGTCCAGACAGTCAAGT
TTGAATATCTTTAGGCAATAGATGATTACATGTTGCATGCCTATGTGAAAGAAATTCGTGGTGGACTCTTAGAGGCTGTT
GAATTTGTTGCCCTTTTAGGCAAATTCTTGACTGGTCTTGATTACCTATTGGGCGGGACCCCTGCTTTTGCCAACAAACT
GGTCAGCTTGGATTAGAAAGCCATCACCTGTTGAAGGATAGACGTGCATGGCTAAACTCAGTTTCGTGGGTGAAAAGTGA
TAATTGTTTGGTTTTGTAAAAAAAAA-----AAGTTTGCAGAAGTTAATCTGAACCTTTGACTACTACCAGAAAATAATG
GATAGGAAAATTGCCAAACGAGCTGTTGACTATTTGTTTCATGAGCCACCAGAAAGCTCCTGTAGCACAGTGCTTCTAGA
TATCAGATGTGTCTCAACACTGCATGTTTGTGTCCTCAATTCTCGAAACCATGTTTTTTTGCCGTCCTCAATTCTTGAAA
CAGTGCCTTGTTTACTTCTTTTTTTTGCTTGGTGGTGCTTCTACGTTTTTGTTTTACTTTAAGTGCCTCAGCGAATGTGT
ACACCAGAGTTTTTCTTTTTCTTGACAGAGATCTCCTAACGCAGAGATTTATATTGCTTTCACCATGCAGTACTAATCAT
GTGCGTCCATTTTACAACTAGATGTTGGATGCATGTGGAGTAGCAAACATTGGCCTTTTACAAATGATGATATGTATCAT
GAGATGACATGCTTGCAGCTCCTTTGCCATGATATAAAGAGCTGACATTTTGCATTTCTTATA-TACTACTCTGCTGTAA
AGTTTTGGGCTTAAGCTTAACATA-TACAACTTGCCACAGCATCGGCGCTTCTAAGATGAACAATGAGTGCACATCTTTC
AGGAACAGCTGTGGAGAAGAAAATGCTGAAGGGTATCTCTCTCTCTCTCTC------------------T----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CCTGCTTAATTAGTTGG
TTAGCATGTCGACATGTGGTTTAATATCCAAAGCATACAGGTTAATCGCTACCGACGCGTCTTCTTTCATCCATATTAAT
ATATTATTATGCAGTTGCAGGAGAACTTTCCAGAAAGTGAAGAGGGAGCATGCTATTCTGAGGCAGAAGCTGGAGTCCTA
CTTCCAGGTAATCTTCATGAATCAAT----------------------CATCACTCTGTGTATCCGATCTCGCCATGTGT
TCTAACAACATGACATGGCCACACACAGCTGCTGCGACAAGCCGGTCCTGCCAGGACCGCGACCAGGCCTGGAAGCATGT
AAGG-------CGCTGGCCGCTGGCGCTTTACAGGGAGGTGAACCACTATATCTCT--ATACGGGATCGTTGCAGAGAAA
GAAGACCCAGGAGCAGGAGACATGCCTGGTACTGCCATGGGTGCTAGCTAGTTTATTAATGCCTGAAAGAT----TATAA
TGATCATAAAAAAGTATCATACTG--TACTATAATCATAAGGGCGCCATGTTGGTGTCCTGTTGGATAATAGTCTGATAT
AGTCGTGTCATGTCATGTCCGCGCTTATGTACGATAAATAACACGAACCGAGCTTGCAAGTGTCTGTTATTAATTAA---
---------TTATTTTATACAACAAGCTTTG---TGAATGTTTGCACAACAGCTAACTGGAAAGCAATGGTCATAGTATT
TCTTATATCCTCTCAAGATGCCATCTAATAAAGTCGACTACAGATTTGATCCCCTCACTTGACCAAAACTGTGAAAAAAA
AACAATACACTATGAACCCATTGATTCTTCTCTTTAATTGAAACCTATCACTCGCCGCTCTTTTTATTTGATTTAGTCTT
CATTTTTTATCTGGGATATTTGTAGAGGTT-AGTAAATCTTTTTCGCTTTGCCTTTATCCGCCCTTATTTTGTGTGAGAC
GTCGTCCAGACTGCGAGGGGTCGC--------TGTGCGGAGCTGAAA--TTTAATCTCATGTGCGTCGGTGACCACTGAT
GTGG-------TAGGCTGAACTTGGAGTGTTAGGACCGCCTGAGAGGTTGCGATGGCTCTAATCAACGTCTGATGGACAT
TACTGAGCTAACGGGGGAATAGTTGTGAAATCTCCCGTGATGGGTATGACTGAGCTACCATGGATACA--TCTCACTATG
CCAAACTTGTTGCAGGGGGTATTGATTGATTGATTTGTTTACATGCGCCC----GCTTTGTGGCCTGACTGTGAAGTCGC
AACCACTTTGGGGACGACGCAGGCAGAGATGATAAAAGGGAAACCAAGATGAACTCCCAGTTGCCGAAGAACAGAGGGGG
AAAAAACTTCGCGCCG
>chr1A_1
TTCTCTAGCTTTCTTTGGGCTGTGCACAAAGTAGGCATATCTTAGACCTATTCGAATTCTCTATCGTTCTCGATGATTTT
ATCACCACATTATGCTTGAACTTTGAGATACACAAACACTAGTTTTGTTATACCATTCCCCTTATGTCCGTGTATTAGTT
CCTGCAACGTGTCGCTCTAGAAAATTTCCTCTATCAGGACAGTTCATATATCCAGACTTGACACATGTTCATTTCCTGTA
AGAATGAGCCACCACATGAAACATCTTATGTGATCAAGTAATACTCTTTATGTTCATTGTCTTGATTCTTGGACTCCAGT
ATGCTCAGACCGAGGCATGTATAGATGAACCCATGTAAATGTTCCTCACCGGGAAAAGAGAATGCTGTTTTGTTTCGCCC
TCGATGAATGACCATTGAATTCCTTCTTTCCAATTTAGTCTGATAATGTCAAGCCTTGAGAAAGTTGTTAGAATTTAGAA
CTTGTCAGAAGCTATCACATGCAGATGCTGACCTATATCTGATTATGTTATAAGTATTGTTTTTTTTA--ACCTTTTTAC
CTTCTTCTGGAGTTTGTTCTTCAGGTTTGCAGATGTCAAATTTGTATGCTCGATGATGTGCGATGTAGAAAAAATGGACT
GAGGGTAGTAACCCATCTGCATAGACCAAAGAAGAAAGGCTTGGGTTTCTACACGCCAATATAAAGGAGGAGCATCACAG
TCTGTTGATGTTCAAGTCATTCTCCAAAATGTGAATAGATGCTGCACACGCTGCAACAAAACCATTTGCATATGTAAGAT
GATAAGGCTTTGCCATCAGAACTTCAAAATATCTTCACTTCCACTTATGTTGGTGGAGGAACAGTGAAGCCTCCAGAGCT
ATATAAACAACCTGATGTTCAACTTTCTACAACCAGAGAGATCGACCAGTTGGATATGCATTTTGTGCTTGCCTCCCACA
GCCCCTGCTTAGCCTCTTTTCCCATCGTTCAACACTTATAAATGGAGTATGCTAATTTACGACGCCAAGCAGCATCCTTG
AAAAGGAGCCTCTTTGATCAGGCTTGTGCTCTGTTCATCTCATGCATTAAGCATCAAAGTTCATGCAGTAAACACTTGTC
ATGTTTTCTTTACAGAGCCAAGACAAGAATTGTCACTTTGCACCTCTGTTCCAAACTTTGACACACCTTAGAAAAATCTG
AATGAAGCACA-AATATTGAATAAGTTTGCTACCATTTAGTGCTTAAATTCCGCTTTTTCTTTATGTGCGGCAACACTTT
AAGAATTAAGATTTTTTTAGCCATTTTGGAACTCTCCTTTTCTGCTACTTATCTTATTTTAATGTGCGTTGATATTGATA
TGTGCTGATTTAGCTAATCATATTTGGTAACAGGGGTATTTGGATGAGCAATTTTGCCAGGTTGAGGACTTGCAGGATGA
AGCAAGCCCCAATTTTGCAGAAGAAGTGGTCTCCTTGTTCTTCAAGGACTCAGCGAGGCTAGTGACAAACATTGAGCAAG
CTATGTAAGCAATGGCACTTCCATAAACTTAGTCAATTGTTGTTAAGCAGTATCTAACAACAACACTGCAGGGAGAAGTA
TCCAAAAGATTTCAATAGATGGGATGCACACATGCAGCAGCTTAGAGGCAGCTGTTTTAGGTATGTCAAGACAGTCAAGT
TTGAATATCTTTAGGCGATAGATGATTAGATGTTGCATGCCTATGTGAAAGAAATTGGTGGTGGACTCTTAGAGGCTGTT
GAATTTGTTGCCCTTTTAGGCAAATTCTTGACTAGTCTTGATTACCTATTGGGCAGGACCCCTGCTTTTGCCAACAAACT
GGTCAGCTTGGATTAGAAAGCCATCACCTGTTGAAGGAGAGACGCACATGGCTAAACTCAGTTTCGTGGGTGAAAAGCGA
TAATTGTTTGGTTTTGTAAAAAAAAAGTCACAAGTTTGCAGAACTTAATCTGAACCTTTGACTACTACCAGAAAATAATG
GATAGGAAAATTACCAAACAAGCTGTTGACTATTTGTTCCATGAGCCACCAGAAAGCTCCTGCAGCACACTGCTTCTAGA
TATCGGATGTGTCTCAACACTGCATGTTTGTGTCCTCAATTCTCGAAACCATTTTTTTTGT-CGTCCTCAATTCTTGAAA
CAGTGCCTTGTTTACTTCTTTTTTTTGCTTGGTGGTGCTTCTACGTTTTTGTTTTACTTTAAGTGCCTCAGTGAATGTGT
GCACCAAAGTTTTTCTTTTTCTTGACAGAGATCCCCTAACGCAGAGATTTATATTGCTTTCATCACGCAGTACTAATCAT
GTGCGTCCATTTTACAACTAAATGTTGGATGCATGTGGAGTAGCGAACATTGGCCTTTTACA---GATGATATGTATCAT
GAGATAACATGCTTGCAGCTCCTTTGCCATGACATAAAGAGCTGACAATTTGCATTTGTTATA-TACTACTCTGCTGTAA
AGTTTTGGGCTTAAGCTTAACATA-TACAACTTGCCACAGCATCGGCGCTTCTAAGATGAACAATGAGTGCACATCTTTC
AGGAACAGCTGTGGAGAAGAAAATGCTGAAGGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CCTGCTTAATTAGTTGG
TTAGCATGTCGACATGTGGTTTTCTATCCAAAGCATACAGGTTAATCACTACCGACACGTCTTCTTTCATCCATATTAAG
ATATTATTATGCAGCTGCAGGAGAACTTTCCAGAAAGTGAAGAGGGAGCATGCTATTCTGAGGCAGAAGCTGGAGTCCTA
CTTCCAGGTAATCTTCATGAATCAGT----------------------CATCACCATGTGTATCCGATCTCGCCATGTGC
TCTAATAACATGACATGGCCACACGCAGCTGCTGCGACAAGCTGGTCCTGCCAGGGCCGCGACCAGGCCTGGAAGCATGT
AAGG-------CGCTGGC-------GCTTTACAGGGAGGTGAACCAGTATATCTCT--ATACGGGATTGTTGCAGAGGAA
GAAGACCCAGGAACAGGAGACATGCCTGGCGT----------------TAGTTCATTAATGCCTGAAAGATACCGTATAA
TGATCATAAAAAAGGTATCATAG---TAATATAATCATAAGGGCACCATGTTGGTGTCCTGTTGGATAATAGTCTGATAT
AGTCGTATCATGTCATGTCCGCGCTTATGTACGGTAAATAAAACCAACCGAGCTTGCAAGTGTCTGTTACGGAGTATTAA
TTAATTAATTTATTG---ACAAGGAGCCTGTGAATGAATGTTTGCACAACAGCCAACTGGAAAGCAATAGTCATATTTCT
TAT-----------------------------------------------------------------------------
-----------------CCATTGATTCTTCTG-TTAATTGAAATCTATTACTGGCCGTTCTTTTTATTCGATTTAGTCTT
CATTTTTTATGTGAGATGTTTGTAGAGGTT-AGTAAATCTTTGTCGCTTCGCCTTTATCTGCCCCTATTT----------
---GTCCAGACAGCGAGGGGTCATTCCGTTGTTGTGCCGAGTTGAAATTTTTAATCTCATGTGCGTCGGTGACCACTGAT
GTGGATTGTGGTAGGCTGAAGCTGGAGTGTTAGGACCGCCTGAGAGGTTGCGATGGCTCTAATCAACGTCTGATGGACAG
TACTGAGCTAACGGGGGAATAGTTGAGAAATCTCT-GTGATGGGCATGACTGAGCTACCAAGGATATCTCTCTCACTATG
CCAAACTTGTTGCAGGGTGTACTGATTGG----TTTGTTTACATGCGCCCTCACGCTTTGTGGCCTGACCGTGAAGTCGC
AACCACTCTGGGGACGACGCAGGCAGAGATGATAAAAGGGAAACCAAGATGAACTCCC----------------------
----------------
>chr1B_1
TTCTCTAGCTTTCTTTGGGCTGTGCACAAAGTAGGCATATCTTAGACCTATTCGAATTCTCTATCGTTCTCGATGATTTT
ATCACCACATCATGCTTGAACTTTGAGATGCACAAACAGTAGTTTTGTTATACCATTCCCCTTATGTCCGTGTATTAGTT
CCTGCAACGTGTCGCTCTAGAAAATTTCCTCTATCAGGACAGTTCATATATCCAGACTTGACACATGTTCATTTCCTGTA
AGAATGAGCCACCACATGAAACATTTTATGTGATCAAGTAATATTCTTTCTGTTCATTGTCTTGATTCTCGGTCTCCAAT
ATGCTCAGACCGAGGCATGTATACATGAACCCATGTAAATGTTCCTCACCGGGAAAAGAGAATGCTGTTTTGTTTCGCCC
TCGATGAATGACCATTGA-TTCCTTCTTTCCAATTTAGTCTGATAATGTCAAGCCTTGAGAAAGTTGTTAGAATTTAGAA
CTTGTCAGAAGCTATCACATGCAGATGCTGACCTGTATCTGATTATGTGATAAGTTT--TTTTTTTTA--ACCTTTTTAC
CTTCTTCTGGAGTTTGTTCTTCAGGTTTGCAGATGTCAAATTTGTACGCTCGATGATGTGCGATGTAGAAAAAATGGACT
GTAGGTAGTAACCCATCTGCATAGACCAAAGAAGAAAGGCTTGGGTTTCTACACCCCAATATAAAGGAGGAGCATCACAG
TCTGTTGATGTTCAAGTCCTTCTCCAAAATGTGAATAGATGCTGCACACGCTGCAACAAAACCATTTGCATATGTAAGAT
GATAAGGCTTTGCCATCGGAACTTCAAAATATCTTCACTTCCACTTATGTTGGTGGAGGAACAGTGAAGCCTCCGGAGCT
ATATAAACAACCTGACGTTCAACTTTCTACAACCAGAGAGATCGACCAGTTGGATATGCATTTTGTGCTTGCCTCCCACA
GCCCCTGCTTAGCCTCTTTTCCCATCGTTCAACACTTATAAATGGAGTATGCTAATTTACGACGCCAAGCAGCATCCTTG
AAAAGGAGCCTCTTTGATCAGGCTTGTGCTCTGTTCATCTCATACATTAAGCATCAGAGTTCATGCAGTAAACACTTGTC
ATGTTTTCTTTACAGAGCCAAGACAAGAATTGTCACTTTGCACCTCTGTTTCAAACTTTGACACACCTTAGAAAAATCTG
AATGAAGCACAAAATATTGAATAAGTTTGCTACCATGTAGTGCTTAAATTCCGCTTTTTCTTTATGTGCAGCAATGCTTT
AAGAATTAAAAAAATTTAA-CCATTTTGGAACTCTCCTTTTCTGCTACTTGTCTTATTTTAATGTGCGTTGATATGGATA
TGTGCTGATTTAGCTAATCATATTTGGTAACAGGGGTATTTGGATGAGCAATTTTGCCAGGTTGAGGACTTGCAGGATGA
AGCAAGCCCCAATTTTGCAGAAGAAGTGGTCTCCTTGTTCTTCAAGGACTCAGCGAGGCTAGTGACAAACATTGAGCAAG
CTATGTAAGCAATGGCACTTCCATAAACTTGGTCAATTGTTGTTAAGCAGTATCTAACAAGAACACTGCAGGGAGAAGTA
TCCAAAAGATTTCAATAGATGGGATGCACACATGCAGCAGCTTAGAGGCAGCTGTTTTAGGTATGTCTAGACAGTCAAGT
TTGAATATCTTTAGGCGATAGATGATTAGATGCTGCATGCCTATGTGAAAGAAATTGGTGGTAGAATCTTAGAGGCTGTT
GAATTTGTTGCCCTTTTAGGCAAATTCTTGACTAGTCTTGATTACCTATTGGGCAGGACCCCTGCTTTTTCCAACAAACT
GGTCAGCTTGGATTAGAAAGCCATCACCTGTTGAAGGAGAGACGCACATGGCTAAACTCAGTTTCATGGGTGAAAAGTGA
TAATTGTTTGGTTTTGTAAAAGG-AAATCATAAGTTTGCAGAACTTAATCTGAACCTTTG-CTACTACCAGAAAATAATG
GATAGGAAAATTGTCAAACGAGCTGTTGACTATTTGTTTCATGAGCCACCAGAAAGCTCCTGTAGCACACTGCTTCTAGA
TATCGGATGTATCTGAACACTGCATGTTTGTGTCCTCAATTCTCGAAACCATATTTTTTTGCCGCCCTCAATTCTTGAAA
CAGTGCCTTGTTTACTTCTTTTTTTTGGTTGGTGGTGCTTCTATGTTTTTGTTTTACTTTAAGTGCCTCAGGGAATGTGT
AAACCAGAGTTTTTCTTTTTCTTGACGGAGATCTCCTAACGCAGAGATTTATATTGCTTTCATCACGCAGTACTAATCAT
GTGCATCCATTTTACAACTAGATGTTGGATGCATGTGGAGTAGCAAACATTGGCCTTTTACAAATGATGATATGTATCAT
GAGATGACATGCTTGCAGCTCCTTTGCCATGACATAAAGAGCTGACATTTTGCATTTGTTATATTACTACTCTGCTGTAA
AGTTTTGGGCTTAAGCTTAACATAATACAACTTGCCACAGCATCGGCGCTTCTAAGATGAACAATGAGTGCACATCTTTC
AGGAACAGCTGTGGAGAAGAAAATGCTGAAGGGTATCTCTCCCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTTTTTGAGGGTCCCTGCTTAATTAGTTGG
TTAGCATGTCGACATGTGGTTTTCTATCCAAAGTATACAGATTAATCACTACCGACGCGTCTTCTTTCATCCATATTAAT
ATATTATTATGCAGTTGCAGGAGAACTTTCCAGAAAGTGAAGAGGGAGCACGCTATCCTTAGGCAGAAGCTGGAGTCCTA
TTTCCAGGTAATCTTTGTCATCCCCAGCTTCATCTCTTGGGAGCTGCCCATCATGGTGCTCATCTGATCTCGCCGCGTGT
TCTAATAACATGACATGGCCACACGCAGCTGCTGCGACAGGCCGGTCCTGCCAGGACCGCGACCAGGCCTGGAAGCATGT
AAAGCGCTGGCCGCTGGC-------GCTTTACAGGGAGATGAACCAGTATATATCTCTATATGGGATCGTTGCAGAGAAA
GAAGACCCAGGAACAGGAGACATGCCTGGTACTGCCATGGGTGCTAGCTAGTTCATTGATGCCTGAAAGATACCATATAA
TGATCATAAAAAAAAGTACTCTATCATACTATAATCATAAGGACGCCATGTTGGTGTCCTGT---------GTCTGATAT
AGTCGTATCATGTCATGTCCGCGCTTATGTACGATAAATAAAACCAACCGAGCTTGCAAGTGTCTGTTGTTAATTAA---
---------TTATTT---ACAACAAGCTTGTGAATGAATGTTTGCGCAACAGCTAGCTGGAAAGCAATAGTCATATTTTT
CTT--TATCCTCTCAAGGCGCCATTGAATAAAGTTGACTACACATTTAATCCCCTCACTTGACCAAAACTGTGAAAAAAA
T----TACACTATGAACACATTGATTCTTCCCTTTAATTGAAATCTATTACTCGTTGTTCTTTTTATTTGATTTAGTTGT
CATTTTTTATGTGCGATCTTTGTAGAGAACCAGTAAATCTTTTTTGCTTCGCCTTTATCTGCCCTTATT-----------
---GTCCAGACTGCAACGG--------GTTGTTGTGCGGAGTTGAAA---TTAATCTCATGTGCGTCGGTGACCACTGAT
GTGG-------TAGGCTGAAGTT-GAGTGTTAGGACCGCCTGAGAGGTTGCGATGGCTCTAATCAACGTCTGATGGACAT
TACTGAGCTAACGGGGGAACAGTTGAGAAATCTCT-GTGATGGGCATGACTGAGCTACCAAGGATATG--TCTCACTATG
CCAAACTTGTTGCAGGGGGTATTGATTGATTGATTTGTTTACATGCGCCC----GCTTTGTGGCCTGACTGTTAAGTCGC
AACCACTCTGGGGGCGAGGCAGGCAGAGATGATAAAAGGGAAACCAAGATGAACTCCAAAGTGCGGAAGAAGGGA-GGGG
GAAAAACTTCGCGCCG
>SNPs
-------S--------------S---------------------------------------------------------
------------------------------S---------S---------------------------------------
-------------S-------------------------------------------S-----S----------------
---------------------------------------------------S----------------------------
----------------------------------------------------S---------------------------
-S--------------------------S---------------------------------------------------
------------------------------------------------------------------SSSS----------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
------------------------------------------------------------------S-------------
---------------------------------------------------------------------------S----
--------------------------------S---------S-------------------------------------
--------------------------S----------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S--------------S------------S-S------------
------SSSS------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S---------------------------------------------------------------S------------
----------------S-----------S---------------------------S-----------------------
---------------------------------S--------------------S-------------------------
--------------------------------------S-----SS----------------------------------
-------------------------------------------S------------------------------------
---------------------------------------------------------------------S----------
----S-----------------------------------------------S---------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------S--S--------------
--------------------------------------------------------------------------------
--------------------------------S------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------SS-----------------------S--------------------------------
--------------------------------------------------------------------------------
------------------------S-----------------------------SS------------------------
-----S------------------S-------------------------------------------------------
------------------SSSSSSS---------------------S---------------------------------
------------S----------------------------------------S--------------------------
--------------SS-SS-SSSS--------------------------------------------------------
------S----------------------------------S--S-----------------------------------
---------------SSS-----------SS-------------------------------------S------S-S--
-S-SS------------SS-----SS--------S-------S----S--------------------------------
SSSSS--------------------------------------S----S--------S----------------------
----------S--S---S-------------------------------S---------S----------SSSSSSSSSS
SSS-------------------SS-----------------S--------------------------------------
--------------------S-----------------------------------------------------------
-------------------------S--------SS--------S---------------S-----SS------------
--------------------------------------------------------------------------------
-------S---------------------------------------------------SS---S------SS--S----
S---------------
>forward_402
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TGCTGTTTTGTTTCGCCC
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>reverse_1737
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CGTGGTGGACTCTTAGAGGC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>forward_876
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AGGAACAGTGAAGCCTCCGA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------
>reverse_3176
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------CTGTGTATCCGATCTCGCCA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>forward_2433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------TGCAGCTCCTTTGCCATGAT-----------------------------------------------
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----------------
>reverse_3804
--------------------------------------------------------------------------------
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-------------------------------------------CCTATCACTCGCCGCTCTTT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
