>input_sequence_41148
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---------------------------------------------ATGGCTCACAACTTCGTGCCTGATGCATGGGGTTG
GATCACCAGCCTGCCCCCATTCTCCCAGTGGCGCACCAACACCATGTCCCTCTGCATCTGCGCCACGCCTTCAGCGTCGG
CGTCATCACAGCCGACATCAATGACCCTCTCGGTTGCCAAAACACCTCCCACCCAGCCTTCCTACCTCACCTTCTCCATC
TCCGCCAACTACCGCGAGCCGATATTCCTGTGGACGTCGAAACCGGTCCACCTGAAAACCAAGGCGCAGCAATCCCTGGA
CGAGCAAGACATGGTGCAGCTGTTTGTGGACATCGTGAACCAGGTGCTGTGGTACGGGCCGGACAACAGCAGCAAGCCGT
CCTTCCGGTTCCCCGGGGCGCAGCACCTCCATGGCGGCAGCTTCAGCGACGCGTTCAACATAGTCTTCTTGTCACTTGCT
TTCCTGGTCTGCATCTACGAGGCGCCCCGCGACCTCCGCCGTGGGTGCCTGGACTCACTGAGGACCCAGCTGACCAGCCC
AAAGTGCAGAGGCGCTGCAAAGACCCTCGTCAAAATGCTCGGCGCCAACCTCGAGGACCAGTGGATGCAGACGATGAATC
TCGCGGTGACCAACTGGATGGCCGAGATGCGGTCCTCACACCACGCGCCCAGGGCAGCGTCACCGCTCTTCTCGTACGCC
CTCCAGGCAAGCGGGCTCTGGAAGGTCCAGCTGTACTGCCCAGTGATCGCCATGGGCATGGAGGATCCTGCGGCAGCGGC
GGCGCAGGATGAGCGCCTTCTCTTCTCACTCACTTATCAGCAACTTGAAGGCGTGGTCCAGCTAGCCTACAAAACAGTCA
GAAGGGATAACTGGATTGATATCGAGGTAAAGGTGGATAACATAAGGTCAGTGGTATTC---------------------
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-------------------------------ACATATACAGATTTCCATTCTCTTTGTCGCATTAACCATTTCTAAGCAC
CCCCGACCGCTGTCATCAATACCAAAAAATTAATAGAGAGAACAGCCGAGTTTTGTAGTTGACATTTCCTCAAAGGTCTA
ACTAACAACTTAGATCCTTGGAAGAGTAAAACTATTTTGTTGATGCCTACAGCAAGGCAACAACATGTTTTAGAAGTTCA
AATGCTTGTTGATCTTAGCTGTGACTGGGCTAAATGTTTACTCAATCAAAAACACTGAAATCTAACAACTCAATTGTTTC
AGTTAAGATACTGCCAACCGTAGAAAGCAAATTTCGAATTTCCTCATATATGTGAAGAACACTTACTGTGGCATTCCTCG
ATATCAGGTGCGACGTGGACCCTTTGGTCTCCGAGACCCTCATGGCGGAGCGCGGATATGGTTCTGAAGAGAAGCATTTC
CCATCTCGTGTCATGCTGCAGATCACACCTATGCAACAAACAGATGTACTGTCAGTTTCAGTCAGCAAGTCATCCGACAA
CCCCACCCACGAGTTCGGTATTGAAAAAGGCTTCGAGGGCTCGTTCGATCCCCCAAACTCATTTGGTCTCAAGGCCTCTG
TCACTGAAAGCCTCACGCTGGCCATGAAACCCTGGAAATTCGAGCAGTCCGTGCACGGAAACACTGCAACCTTGAACTGG
TTTCTGCACGACGGCATGAACGGGAGGGAGGTTTGTGCTTCAAAGCCTTCCAAGCTTTCGCTGCTTCAGCCGAGGGCTTG
GTTCCGTGACAGGTACTCAAATGCGTACCGCCCATTCACAAAGCAGGGCGGAATCATTTTTGCCCGCGATGAGTATGGAG
ACAGTGTAAACTGGAAGGTCTGTGGTGCAGCATTAGGAAAGACTATGGACTGGGAAATCAGAGGCTGGATTTGGCTAACC
TACTGGCCAAACAAACAAAGGACCTCTCACAGTGAGACAAGGTGGCTTGAATTCAGAGAATGTCTGCAACTTCCCCTTAC
AAAGTTTCCATAG-------------------------------------------------------------------
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----------------------------------
>chr3A_1_TraesCS3A01G099000
CAAAATCGGGCCCGAGCCCAAGAAAGCCCGACACGGCCCGGTCGGCCCGGCCTGACCACGACTAAAAATGTGTTTTGTGC
ATACCCGAGACCGGCCAGACCTGCCCGTCGGGCTCAGTTTCCAGGCCCGAGCCCGGCCTGATGGCACACTCGGGCTCAAC
CTGGCCCGGGATTTTTGGGCTGGATCGGGCCGTCCAGGCCGGGCTGCCTATGGCCAAGTCTATCCCAAACCGAACGTTCC
CGCAATATCAAGGTCCAATTTTTACTATTTCTGATGGTCGTTGTGTTCGAGAGAAGCTAATGTGCGAGGGGAGAAAGGGG
GCAAGGACGATGGCGAGGAGAAGGGGTCGGGAAAGGTGGCATGGAGGAGAAATGAAGGCAGCAAGGGAAAGGGGACGGAA
ATGAGGGTGCAAAAGTGTGATGGAGTTTCCCGCAAAAAAAGTGTGATGTAGTTTTCATAAAAAGGTCCGGTCGCGTCAGT
TATTTCGGTACGGAGGGAGTAGCATTTCTCTGCCAGACGAAGAGAAGATTATAC-TCGCAATAACAAAAAAAAAACAC--
--AAGAGAAGGATAAATGGCGTGTGTCTGGAGTTGATAAATTGCAAAGCTTCACGAAAGTACAATGTGAGATTCCTCGGG
TTCCGATTCCCATTTGACAGCAGCCACGGCACAAGTTTCCTTCCGAACAGTACAATTTGTCATCAGGGTCACCAACTTGA
GTTTGAAACGCGTGCTATATATATCAGCAGTTCACGTTCAGCACTGCACGGCAGCATAAAGAGAGATTCTTCGAGTCTCA
ATTAGTAGCAGATAAATTTTCCAATCAGCATCTAGACCAGATAAATCTCTCCCTCCATCCAAGAATCTACTTTACCCGAG
ACTTTGCCGTGCGCTCATTGGGCTCAATCATATGCGATAAACCGAAGTTCTATCCGCCGCGCCATCGCCTTCTTTCCCTC
TTTATAAAAGGCCAGCAAGGAGATCAGGCTTCTTCCAACACCACAATGGCTCACAACTTCGTGCCTGATGCATGGGGTTG
GATCACCAGCCTGCCCCCATTCTCCCAGTGGCGCACCAACACCATGTCCCTCTGCATCTGCGCCACGCCTTCAGCGTCGG
CGTCATCACAGCCGACATCAATGACCCTCTCGGTTGCCAAAACACCTCCCACCCAGCCTTCCTACCTCACCTTCTCCATC
TCCGCCAACTACCGCGAGCCGATATTCCTGTGGACGTCGAAACCGGTCCACCTGAAAACCAAGGCGCAGCAATCCCTGGA
CGAGCAAGACATGGTGCAGCTGTTTGTGGACATCGTGAACCAGGTGCTGTGGTACGGGCCGGACAACAGCAGCAAGCCGT
CCTTCCGGTTCCCCGGGGCGCAGCACCTCCATGGCGGCAGCTTCAGCGACGCGTTCAACATAGTCTTCTTGTCACTTGCT
TTCCTGGTCTGCATCTACGAGGCGCCCCGCGACCTCCGCCGTGGGTGCCTGGACTCACTGAGGACCCAGCTGACCAGCCC
AAAGTGCAGAGGCGCTGCAAAGACCCTCGTCAAAATGCTCGGCGCCAACCTCGAGGACCAGTGGATGCAGACGATGAATC
TCGCGGTGACCAACTGGATGGCCGAGATGCGGTCCTCACACCACGCGCCCAGGGCAGCGTCACCGCTCTTCTCGTACGCC
CTCCAGGCAAGCGGGCTCTGGAAGGTCCAGCTGTACTGCCCAGTGATCGCCATGGGCATGGAGGATCCTGCGGCAGCGGC
GGCGCAGGATGAGCGCCTTCTCTTCTCACTCACTTATCAGCAACTTGAAGGCGTGGTCCAGCTAGCCTACAAAACAGTCA
GAAGGGATAACTGGATTGATATCGAGGTAAAGGTGGATAACATAAGGTCAGTGGTATTC---------------------
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-------------------------------ACATATACAGATTTCCATTCTCTTTGTCGCATTAACCATTTCTAAGCAC
CCCCGACCGCTGTCATCAATACCAAAAAATTAATAGAGAGAACAGCCGAGTTTTGTAGTTGACATTTCCTCAAAGGTCTA
ACTAACAACTTAGATCCTTGGAAGAGTAAAACTATTTTGTTGATGCCTACAGCAAGGCAACAACATGTTTTAGAAGTTCA
AATGCTTGTTGATCTTAGCTGTGACTGGGCTAAATGTTTACTCAATCAAAAACACTGAAATCTAACAACTCAATTGTTTC
AGTTAAGATACTGCCAACCGTAGAAAGCAAATTTCGAATTTCCTCATATATGTGAAGAACACTTACTGTGGCATTCCTCG
ATATCAGGTGCGACGTGGACCCTTTGGTCTCCGAGACCCTCATGGCGGAGCGCGGATATGGTTCTGAAGAGAAGCATTTC
CCATCTCGTGTCATGCTGCAGATCACACCTATGCAACAAACAGATGTACTGTCAGTTTCAGTCAGCAAGTCATCCGACAA
CCCCACCCACGAGTTCGGTATTGAAAAAGGCTTCGAGGGCTCGTTCGATCCCCCAAACTCATTTGGTCTCAAGGCCTCTG
TCACTGAAAGCCTCACGCTGGCCATGAAACCCTGGAAATTCGAGCAGTCCGTGCACGGAAACACTGCAACCTTGAACTGG
TTTCTGCACGACGGCATGAACGGGAGGGAGGTTTGTGCTTCAAAGCCTTCCAAGCTTTCGCTGCTTCAGCCGAGGGCTTG
GTTCCGTGACAGGTACTCAAATGCGTACCGCCCATTCACAAAGCAGGGCGGAATCATTTTTGCCCGCGATGAGTATGGAG
ACAGTGTAAACTGGAAGGTCTGTGGTGCAGCATTAGGAAAGACTATGGACTGGGAAATCAGAGGCTGGATTTGGCTAACC
TACTGGCCAAACAAACAAAGGACCTCTCACAGTGAGACAAGGTGGCTTGAATTCAGAGAATGTCTGCAACTTCCCCTTAC
AAAGTTTCCATAGTCTATCTGTAGTATTTCAAATGATGTGTATAGCAGTGTTAGTGGTGTGTGTGCATGTAAGACAGTAA
GAGCTATAAATAAATAAATGAAGTTATTATATTGTAGTTTTGCTATACATTTAAGAGATAAGAGAAAGAAATTCCAAACG
TGCCTCTTGGAGCAATATAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGGGG-------------TGCTAATCACATGTGGCACGTGGAACTATAATGCAACAATTAACTCAACATTCT
GTGTATGTACCACTTTATCTCAAGAGATGACTTGAGTTCAACCAAACAAATAAAGCAACATGGCCAGCAAAGCAAGCTCT
TTAAATA--TGGATAGTTTTTAC---------------------------------------------------------
--------------------------------------------------------------------TACACATGAACT
CAACATGTAGGGCAACTTCTTCTACCCGTTGGCTTGTAGTAGTATAACAGTTACGCAGTAAGATGAAAACCATAAATGCC
TACAAAGCTTTATGCTACAGACACTATAGCTCTAATATGAAAAGACT-CTTAAGCCCATCAAATTCCATATATGTACTCT
TCATTTACTTACATTGTTTATCAGCATTCAATTCCATAATTATCATGTTGAGAACTTCAACTTTGGAGTAATCATATGTA
ACTTCAACTTTGGAGTAATCATATGTAACTTCAACTTTCTTTTTTGAGGGACTATGCAACTTTAACTGTGTAAAGCAGTT
TTAAAGCTCTTTTTCTATAAGAAGAAAATAAAAG
>chr3B_508
--------------------------------------------------------------------------------
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---------------------------CTCTGCCAGACCAAGAGAAGATTATTATTCTCAATAACAAAAAGAAAAAAACA
CAAAGAGAAGGATAAATGGCGTGCGTCTGGAGTTGATAAATTGCAAAGCTTCACGAAAGTACAATGTGAGATTCCTCGGG
TTCCGATTCCCAGCTGACAGCAGCCACGGCACAAGTTTCCTCCCGAACAGTACAATTTGTCATCAGGGTCACCAACTTTA
GTTTGAAACGCGTGCTATATATAACAGCAGTTCACGGTCAGCACTGCACGGCAGCATAAAGAGAGATTCTTCGAGTCTCA
ATTAGTAGCAGATAAATTTTCCAATCAGCATCTAGACCAGATAAATCTCAAA------CCAAGAATCTACTTTACCCGAG
ACTTTGCCGTGCGCTCATTGGGCTCAATCATATGCGATAAACCGAAGTTCTATCCGCCGCGTCATCGCCTTCTTTCCCTC
TTTATAAAAGGCCAGCAAGGAGCTCAAGCTTCTTCCAACGCCACAATGGCTCACAACTTCGTGCCTGATGCATGGGGCTG
GATCAGCAGCCTGCCCCCATTCTCCCAGTGGCGCACCAACACCATGTCCCTCTGCATCTGCGCTACGTCTTCACCGTCGG
CGTCATCACAGCCGGCATCAATGAGCCTCTCAGCCACCAAATCACCCCCCGCCCAGCCTTCCCACCTCACCTTCTCCATC
TCCACAAACTACCGCGAGCCGATCTTCCTGTGGACGTCGAAACCGGTCCACCTGAAAACCAAGGCGCAGCAATCCCTGGA
CGAGCAAGACATGGTGCAGCTGTTCGTGGACATCGTGAACCAGGTGCTGCGGTACGGGCCGGACAACAGCAGCAAGCCGT
CCTTCCGGTTCCCCGGGGCGCAGCACCTCCATGGCGGCAGCTTCAGCAACGCGTTCAACATAGTCTTCTTGTCCCTTGCT
TTCCTGGTCTGCATCTACGAGGCGCCCCGCGACCTCCGCCGTGGGTGCCTGGACTCACTGAGGACTCAGCTGACCAGCCC
AAAGTGCAGAGGCGCTGCAAAGACCCTCGTCAAAATGCTCGGCACCAACCTCGAGGACCAGTGGATGCAGACGATGAATC
TCGCAGTGACCAACTGGATGGTCGAGATGCGCTCCTCGCACCACGCACCCAGGGCAGCGTCACCGCTCTTCTCGTACGCC
CTCCAGGCAAGCGGGCTCTGGAAGGTCCAGCTGTACTGCCCAGTGATCGCCATGGGCATGGAGGATCCTGCGGCAGCGGC
GGCGCAGGATGAGCGCCTTCTCTTCTCACTCACTTATCAGCAACTTGAAGGCGTGGTCCAGCTAGCCTACAAAACAGTCA
GAAGGGATAACTGGATTGATATCGAGGTAAAGGTGGATAACATAAGGTCAGTCGTATTCACATATACAGATTTTACCGAA
ATAGGCTTACGCCCCGCTATATTGATATAGCAACCACCCGATACAACAATCCGATCCACGCTGGGGCAAACAACACAAGC
ACGCCCAAAAGAAATAACAAGAGAAAATAAGAGAAGAAATGCCAACAACGCCGGGTCGACGAAAGCTACGGCACACCGCG
ATCGTTGCGCCCACCGAAGATAACCACCACGCTCCAAAGCCACCGAGTTGCCGTGTACCAAGCACCACCTTCAAGAAGGA
ATGCGACGATGACGACGCTGCTGCCCGGACGAGTCCTAGGATTTCTCCCGGTACACGGAGGGTAGAGGGGGGAGAGGGTC
ACCCGACGCCCTTCAAGAAGGATGGTGGCGCCCGCAGGCGTCACCGCGTTGGTGCCGGCAAGACCCGACATGGATTTCTC
CCGACCTCTCGCGCCCACCACCCAGGACCAACCTTCGGCTCCACCACACCCGCCGCCCACCAACATGCGCCAACAGTCAC
GAGGACACCGCCGTCGTCTCACCACGGCCAACGAAGCAAGGCCGGCCGGATCCAAACGAGACACCCGAAGACAAGGACCG
GCAGCACCGCAGCCACGAGGGAGGGAACAACCTCCACCGGCTTAGGCGGTAGCAGACCGGGCATAGCAGCAGAGGCACAC
CAGACCCCCTGTCCGGCCAGGCCCTGCGTGGGCCCGTGAAGCTTCGCCGCCGTGCTGCAGCAGTCGCGGCACAGCAGCCG
CCGTCCCTGTCGCGAGGAGCTCGCCGGAAACCACCGGAGAACAGCCCACTGCGGCCACCAGCAGGCCCGCCCCGACCCAG
ATCAGGCCCGTAGGGCCTAGATCTGGGCCAGCCGAGCGCCGCCGGCCGCCGCAGGCCATGGGCCGTCACCGCCGCCAAGG
GGCAACGCCTCCGCATCGCCGCCGTCCAGATCCGCGCCGGAACGCCGCCGGCCGAAGGGCTCCGCCGCCAGGACCGCTCA
CCCGAGTCGGGGTCCAGCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCAGTCAGATCTGACATATACAGATTTTCATTCTCTTTGTCTCATTAACCACTTCTAAGCAC
CCCTGACCGCTGTCATCAATACCAAAAAATTAATAGAGAGAACAGCCGAGTTTTGTAGTTGACATTTCCTCAAAGGTCTA
ACTAACAACTTAGATCCTTGGAAGAGTAGAACTATTTTGTTGATGCCTACAGCAAGGCAACAACATGGTTTAGAAGTTCA
AATGCTTGTTGATCTTAGCTGTGACTGGGCC-AATGTTTACTCAATCAAAAACATTGAAATCTAACAACTCAATTGTTTC
AGTTAAGATACTGCCAACCATAGAAAGCAAATTTCGAATTTCCTCATATATGTGAAGAACACTTACTGTAGCATTCCTCG
ATATCAGGTGCGACGTGGACCCTTTGGTCTCCGAGACCCTCATGGCGGAGCGCGGATATGGTTCTGAAGAGAAGCATTTC
CCATCTCGTGTCATGCTGCAGATCACACCTATGCAACAAACAGATGTACTGTCAGTTTCAGTCAGCAAGTCATCCGACAA
CCCCACCCACGAGTTCGGTATTGAGAAGGGCTTTGAGGGCTCGTTCGATCCCCCAAACTCATTTGGTCTCAAGGCCTCTG
TCGCTGAAAGCCTCACGCTGGCCATGAAACCCTGGAAATTCGAGCAGTCCGTGCACGGAAACACCGCAACCTTGAACTGG
TTTCTGCATGACGGCATGAACGGGAGGGAGGTTTGTGCTTCAAAGCCATCCAAGCTTTCGCTGCTTCAGCCGAGGGCTTG
GTTCCGTGACAGGTACTCAAATGCGTACCGCCCATTCACAAAGCAGGGCGGAATCATTTTTGCCCGTGATGAGTATGGAG
ACAGTGTAAACTGGAAGGTCTGTGGTGCAGCATTAGGAAAGACTATGGACTGGGAAATCAGAGGTTGGATTTGGCTAACC
TACTGGCCAAACAAACAAAGGACCTCTCACAGTGAGACAAGGTGGCTTGAATTCAGGGAATGTCTGCAACTTCCCCTTAC
AAAGTTCCCATAGTCTATCTGTAGTATTTCAAATGATGTGTATAGCAGCGTTAGTGGTGTGTGTGCATGTAAGACAGTAA
GAGCTATAAATAAATAAATGAAGTTATTATATTGTAGTTTTGCTATACATTTAAGAGATAAGAGAAAGAAATTCCAAACG
TGCCTCTTGGAGCAATATAACGCAAGTCCTTTTTGTTTTTGTTTTTTTTTTGGGGGGG----------------------
--------------------------------------------------------------------------------
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--------GGGGG-------------TGCTAATCACATGTGCCACGTGGAACTATAATGCAACAATTAACTCAACATTCC
GTGTATGTACCACTTTATCTC--GAGATGACTTGAGTTCAACCAAACAAATAAAGTAACATGGGCAGCAAAGTAAGCTCT
TTAAATATGTGGATAGTTTTTAC---------------------------------------------------------
--------------------------------------------------------------------TACACATGAACT
CAACATGTAGGGCAACTTCTTCTACCCGTTGGCTTGTAGTAGTATAACAGTTACGCAGTAAGATGAAAACCATAAATGCC
TACAAAGTTTTATGCTACAGCCACTATAGCTCTAATATGAAAAGACT-C-TAAGCCCATCAAATTCCATATATGTACTCT
TCATTTACTTACATTTTTTATCAGCATTCAATTCCATAATTATCATGTCGAGAACTTCAACTTTGGAGTAATCATATGTA
ACTTCA----------------------------CTTTCTTTTTTGAGGGACTATGCAACTTTAACTGTGTAAAGCAGTT
TTAAAGCTCTTTTTCTATAAGAAGAAAATAAAAG
>chr3D_551
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--------------------------------------------------------------------------AAAACA
CAAAGAGAAGGATAAATGGCGTGCGTCTGGAGTTGATAAATTGCAAAGCTTCACGAAAGTACAATGTGAGATTCCTCGGG
TTCCGATTCCCAGTTGACAGCAGCCACGGCACAAGTTTCCTCCCGAACAGTACAATTTGTCATCAGGGTCACCAACTTGA
GCATGAAACGCGTGGTATATATAACAGCAGTTCACGTTCAGCACTGCACGGCAGCATAAAGAGAGATTCTTCGAGTCTCA
ATTAGTAGCAGATAAATTTTCCAATCAGCATCTAGACCAGATAAATCTCAAA------CCAAGAATCTACTTTACCCGAG
ACTTTGCCGTGCGCTCATTGGGCTCAAGCATATGCGATAAACCGAAGTTCTATCCGCCGCGCCATCGCCTTCTTTCCCTC
TTTATAAAAGGCCAGCAAGGAGCTCAAGCTTCTTCCAACACCACAATGGCTCACAACTTCGTGCCTGATGCATGGGGTTG
GATCAGCAGCCTGCCCCCATTCTCCCAGTGGCGCACCAACACCATGTCCCTCTGCATCTGCGCCACGCCTTCAGCGTCGG
CGTCATCACAGCCGGCATCAATGACCCTCTCGGTTGCCAAAACACCTCCCACCCAGCCTTCCTACCTCACCTTCTCCATC
TCCGCCAACTACCGCGAGCCGATATTCCTGTGGACGTCGAAACCGGTCCACCTGAAAACCAAGGCGCAGCAATCCCTGGA
CGAGCAAGACATGGTGCAGCTGTTCGTCGACGTCGTGAACCAGGTGTTGCGGTACGGGCCAGACAACAGCAGCAAGCCGT
CCTTCCGGTTCCCCAGGGGGCAGCAACTCCATGGCGGCAGCTTCAGCGACGGGTTCAACATAGTCTTCTTGTCCCTCGCC
TTCCTGGTCTGCATCTACGAGGCGCCTCGCGACCTCCGCCACGGGTGCCTGGACTCGCTGAGGACCCAGCTGACCGGTCC
AAAGTGCAGAGGCGCTGCAAAGACCCTCGTCAAAATGCTCGGCGCGAACCTCGAGGACCAGTGGATGCAGACGATGAACC
TCGCGGTGACCAACTGGATGGTTGAGCTGCGGTCCTCGCACCACACGCCCAGGGCAGCGTCACCGCTCTTCTCGTACGCC
CTCCAGGCAAGCGGGCTCTGGAAGGTCCAGCTGTACTGCCCAGTGATCGCCATGGGCATGGAGGATCCTGCGGCAGCGGT
GGCGCAGGATGAGCGCCTTCTCTTCTCACTCACTTATCAGCAACTTGAAGGCGTGGTCCAGCTAGCCTACAAAACAGTCA
GAAGGGATAACTGGATTGATATCGAGGTAAAGGTGGATAACATAAGGTCAGTGGTATTC---------------------
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-------------------------------ACATATACAGATTTTCATTCTCTTTGTCGCATTAACCACTTCTACGCAC
CCCTGACCGCTGTCATCAATACCAAAAAATTAATAGAGAGAACAGCCGAGTTTTGTAGTTGACATTTCCTCAAAGGTCTA
ACTAACAACTTAGATCCTTGGAAGAGTAGAACTATTTTGTTGATGCCTACAGCAAGGCAACAACATGGTTTAAAAGTTCA
AATGCTTGTTGATCTTAGCTGTGACTGGGCCC-ATGTTTACTCAATCAAAAACATTGAAATCTAACAACTCAATTGTTTC
AGTTAAGATACTGCCAACCGTAGAAAGCAAATTTCGAATTTCCTCATATATGTGAAGAACACTTACTGTAGCATCCCTCG
ATATCAGGTGCGACGTGGACCCTTTGGTCTCCGAGACCCTCATGGCGGAGCGCGGATATGGTTCTGAAGAGAAGCATTTC
CCATCTCGTGTCATGCTGCAGATCACACCTATGCAACAAACAGATGTACTGTCAGTTTCAGTCAGCAAGTCATCCGACAA
CCCCACCCACGAGTTCGGTATTGAGAAGGGCTTTGAGGGCTCGTTCGATCCCCCACACTCATTTGGTCTCAAGGCCTCTG
TCGCTGAAAGCCTCACGCTGGCCATGAAACCCTGGAAATTCGAGCAGTCCGTGCACGGAAACACCGCAACCTTGAACTGG
TTTCTGCACGACGGCATGAACGGGAGGGAGGTTTGTGCTTCAAAGCCTTCCAAGCTTTCGCTGCTTCAGCCGAGGGCTTG
GTTCCGTGACAGGTACTCAAATGCGTACCGCCCATTCACAAAGCAGGGTGGAATCATTTTTGCCCGCGATGAGTATGGAG
ACAGTGTAAACTGGAAGGTCTGTGGTGCGGCATTAGGAAAGACTATGGACTGGGAAATCAGAGGCTGGATTTGGCTAACC
TACTGGCCAAACAAACAAAGGACCTCTCACAGTGAGACAAGGTGGCTTGAATTCAGAGAATGTCTGCAACTTCCCCTTAC
AAAGTTTCCATAGTCTATCTGTAGTATTTCAAATGATGTGTATAGCAGTGTTAGTGGTGTGTGTGCATGTAAGACAGTAA
GAGCTATAAATAAAGAAATGAAGTTATTATGCTGTAGTTTTGCTATACATTTAAGAGAT-AGAGAAAGAAATTCCAAACG
TGCCTCTTGGAGCAATATAATGCAAGTCCTTTTTGTCTTTTGTGTGTGTGTGTGGGGG----------------------
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--------GGGGGGGAGTTGGTAATCTGGTAATCACATGTGCCGCGTGGAACTATAATGCAACAATTAACTCAACATTCC
GTGTATGTACCACTTTA---------------------------------------AATATGGATAGTAAAGTAAGCTCT
TTAAATA--TGGATAGTTTTTACTACTCCCTCCGTCCCAAAATTCTTGTCTTAGATTTGTCTAAATACGAATGTATCAAG
TCACGTTTTAGTATTAGGTACATCCGTATCTAGACAAATCTAAGACAAGAATTTTGGGACGGAGGGAGTACACATGAACT
CAACATGTAGGGCAACTTCTTCTACCCGTTGGCTTGTAGTAGTATAACAGTTACGCAGTAAGATGAAAACCATAAATGCC
TACAAAGCTTTATGCTACAGCCACTATAGCTCTAATATGAAAAGACTTC-TAAGCCCATCAAATTCCATATATGTACTCT
TCATTTACTTACATTTTTTATCAGCATTCAATTCCATGATTATCATGTCGAGAACTACAACTTTGGAGTAATCATATGTA
ACTTCAA---------------------------CTTTCTTTTTTGAGGGACTATGCAACTTTAACTGTGTAAAGCAGTT
TTAAAGCTCTTTTTCTATAAGAAGAAAATAAAAG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-------------SS---S------------S----S-S--
-----------------------S--------------------------------------------------------
------------S----------------------------S--------------------------------------
-----------------------S--------------------------------------------------------
-------------------------------------------------SSSSSSSSS----------------------
--------------------------------------------------------------------------------
----------------------S---S-----------------------------------------------------
-----S--------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S------------------------S------------------------------
-------------------------------------------------------------------------S------
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---------------------S---------------S------------------------------------------
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---------------------------------------------S-----------------------S----------
---S----------------------------------------------------------------------------
----------------------------S--------------------------------------S------------
------------------------------SS----------------------S-------------------------
---------------------------------------------------------------------S----------
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------------------------S--S-----S----------------------------------------------
--S-------------------------------------------------------------S---------------
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----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS---------------------------------S-------------------------------------S
---------------------SS--------------------------------S-------S--------S-------
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--------------------S----------------------------S------------------------------
---------------S--------------------------------S-------------------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------
----------------------------------
>forward_318
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----------------------------------------------------------AATGTGCGAGGGGAGAAAGG--
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>reverse_1305
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------------------------TGTGGACATCGTGAACCAGG------------------------------------
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>forward_476
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--------------------------------------------------------ATAAAAAGGTCCGGTCGCGT----
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_1434
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ACTTGCT
TTCCTGGTCTGCA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_485
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TCCGGTCGCGTCAGT
TATTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_3350
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTTCTAAGCAC
CCCCGACC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_987
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAGGCCAGCAAGGAGATCAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------
>reverse_3670
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------GGCATTCCTCG
ATATCAGGTG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_1330
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CATCGTGAACCAGGTGCTGT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------
>reverse_3865
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------AAAAGGCTTCGAGGGCTC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_3508
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ACAGCAAGGCAACAACATGT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_4936
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CAACATGGCCAGCAAAGCAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
