>input_sequence_41146
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-ATGTATCACCAACATCAGGGCCCTAGTGAGCTCTTCACTACTAGGACGACCTTTCCCATGGAGAGGCATCTGTTTCTGC
ACGGAGGAAGTACGCAAGGAGATTCTGGGCTAGTTCTCTCAACCGATGCAAAACCAAGGCTCAAATGGACACCCGAGTTA
CATCAGCGATTTGTAGACGCGGTCAATCAATTGGGTGGAGCAGAGAGTTAGTATACATCTATATGTTTCTTATCTACTCA
TTGTACAGAAGTCCGCTGAATTCTTACACTC--ATGTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTATG
GGCATTCCAGGACTCACCTTGTATCATCTGAAAAGCCACCTCCAGGTACATGATAATCATAAATTCTCATGTTAAAAATG
GCGCCCATAACTGCAGTCAAGTCAGAATTTCTTTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGTT
AACGTCGGGACAAACAAGAACAGTAAGCCCAAGTTTAACTTCTATAGTTCCATCTTTACCATTATAATATATCTGTATAA
TGACACACAGGCCATGAAATTTTGCAGCCATAGGATGTGCAATTGCAGCTGATGGCATGCCCGGAACAAGTGTGCCAGAG
ATGATCAATACAAATGCCATTCCACAGCCAGAGAAGTAAGGAAACTGGCCATGCAATTCAGAATTGTATTTCATGTGAAT
A-TGAAGTACTAATCTCTCTTACTGGGTGACAGAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAGA
GACAATTAAACGAACAACTTGAGGTGAGGTACTGAAACTACTTGTGTAATAAGCTCTTAACCAAGACAATTCATTAGATG
CACACAGTAGATGGAAATCAAGATAACCTGAATCCTTATTTG-------------------------------ACTGATA
ATGTATTCTAAATCCTTATTTGACACCTTTGAACGCTGCGCTTCCTCCAGGGATGGCCCCATAAAACGAATACAGTCTAG
CAATTAAAGAACCAAAAGAGCGAAAAAGCAATTTGGCACCACTCATTAAATTCAGATGCTTAATACCTTCTTCTAATGTA
GCAATGAACTTT-GTCAAATTCCAGCTAAGTAACAGACCATGCATGGAGTGACTAAAACATATCCATCAGTGCAGTGGTT
CTAACCTGAAATTAAATTGGCAACAGGTACAACGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGCA
GTTCTAGAGCAGGCACAAGAGAGCCTTGGAAAACAGAATTCGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATATC
AGAACTAGTCTCACAAGTATCAAATGAATGTTTCGGCAGTGGAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGAC
TAGAGCCGAGGCAAATCCAGTTCATGGAAAGTTCAACCAATAACTGTTTGACTGCAGCCGGAGGATTCATCAATGAGCAT
AGACTACACAGCCATGGAATGCTCAAAGCATATGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCATGAGTA
TCAGTTTTCCCTTAATAGAAGCCTAAGCGAGCGTAAGATGGGTCATTTGCAAAATGTGAATGAGTACCACAAAGCAGAGT
TTGGAAGTGAAAGTGACATGGAGATTCAACAGGAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCGCCAGTTCG
GCCTCAGGAAGCAAAGAAAGAGATGCAGACAGACTATATCTTGAAGAAGCAAACTGCAAGAGACAAGCGGTTGAACATTC
CGGTTTTGAGCATCCAAGTTCTGGGAAGAAAATTGATCTGAACACTCAAAACACTGATGATGGTGATCAAGGGTATAGGC
ATTTTGATTTAAATGGCTTCAGCTGGAGCTGA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>chr1A_1_TraesCS1A01G305500
GAGCTTATCCCATGTAAAGAGCATAAGCCAGTAGGTCCATACTTTTCTGGACTACAATGAGAATATGTACCAATCTCAGG
AAAGGACACTGATGGAACTTGTGCTTGTTCATATTCTATCCACTTTACAGTAGTACAAAGGACAGAATAAATTGACAGAA
AAATTGTGCTTCTGTGTGTAAGATGTCACTCTCCAAGAAGGCAACAAGTATCAGCAATG-AAAAAAAAACTTAATTGATT
CATTTAAACAAAGATGCACATACTGCATTCCTCTAAGAGCATTAAAATCATTAATCACATAACATGAACCAGCAACACTA
AACTAAATACTAGTAACG-AAGGTAACAGAGAAGTTGCACAAATATTTCCATCTCGGCAAAATGAGTGATTCGGAAAGGT
ATCTTTCACGCTCCAAGCAGATATAGCAGATAATATGCCAAAAAATAACATTCCAGAAAGACAAATTGCTCCAGTTGTAG
GTATTTATTC------------------------------------TGTACATATACCTTCTACTGATCTAATGAGTAAA
-TATGCAGCTGAAGTTTCCATACAGAAATGCAGAGAAAGCTAAAGGACTAGTTTCATTACTGAGGGG-TACAAGGTTGAT
GTTACTCAGCTGTCACAGGTTGCTATTAGTACTGATA-TTTTGATTTTGGTTATTATTTCCAAGAATAACTGAGGACAGC
ATCTTCTGTCAGTTGGGTTAAAGATTGTTCTTCTGCTGTTTGTTCTAAGATGCTAGATTCTATGTTTCCCCATATAAGGA
GCCCCTCACAGGGCATTCCTTATCAACCTGAGAAGACCAAAAGGGTATCAACAGGCTTAAGCTCACACGGAGAACAAGAC
TGGTATTCGTCTTGTCAGTAGGGAAATACTCAATACACAGTTTCAACGTGCAACAGCAAAGAGGAAGGAAGCGACTGCAG
AACAAGTAAGAAGTTGGTTAGATCTTTAAGCCCTCCAAATTTCTGTTGTTCTAAAAATTTCTGTCCATTCTACAGCAGAA
GATGTATCACCAACATCAGGGCCCTAGTGAGCTCTTCACTACTAGGACGACCTTTCCCATGGAGAGGCATCTGTTTCTGC
ACGGAGGAAGTACGCAAGGAGATTCTGGGCTAGTTCTCTCAACCGATGCAAAACCAAGGCTCAAATGGACACCCGAGTTA
CATCAGCGATTTGTAGACGCGGTCAATCAATTGGGTGGAGCAGAGAGTTAGTATACATCTATATGTTTCTTATCTACTCA
TTGTACAGAAGTCCGCTGAATTCTTACACTC--ATGTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTATG
GGCATTCCAGGACTCACCTTGTATCATCTGAAAAGCCACCTCCAGGTACATGATAATCATAAATTCTCATGTTAAAAATG
GCGCCCATAACTGCAGTCAAGTCAGAATTTCTTTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGTT
AACGTCGGGACAAACAAGAACAGTAAGCCCAAGTTTAACTTCTATAGTTCCATCTTTACCATTATAATATATCTGTATAA
TGACACACAGGCCATGAAATTTTGCAGCCATAGGATGTGCAATTGCAGCTGATGGCATGCCCGGAACAAGTGTGCCAGAG
ATGATCAATACAAATGCCATTCCACAGCCAGAGAAGTAAGGAAACTGGCCATGCAATTCAGAATTGTATTTCATGTGAAT
A-TGAAGTACTAATCTCTCTTACTGGGTGACAGAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAGA
GACAATTAAACGAACAACTTGAGGTGAGGTACTGAAACTACTTGTGTAATAAGCTCTTAACCAAGACAATTCATTAGATG
CACACAGTAGATGGAAATCAAGATAACCTGAATCCTTATTTG-------------------------------ACTGATA
ATGTATTCTAAATCCTTATTTGACACCTTTGAACGCTGCGCTTCCTCCAGGGATGGCCCCATAAAACGAATACAGTCTAG
CAATTAAAGAACCAAAAGAGCGAAAAAGCAATTTGGCACCACTCATTAAATTCAGATGCTTAATACCTTCTTCTAATGTA
GCAATGAACTTT-GTCAAATTCCAGCTAAGTAACAGACCATGCATGGAGTGACTAAAACATATCCATCAGTGCAGTGGTT
CTAACCTGAAATTAAATTGGCAACAGGTACAACGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGCA
GTTCTAGAGCAGGCACAAGAGAGCCTTGGAAAACAGAATTCGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATATC
AGAACTAGTCTCACAAGTATCAAATGAATGTTTCGGCAGTGGAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGAC
TAGAGCCGAGGCAAATCCAGTTCATGGAAAGTTCAACCAATAACTGTTTGACTGCAGCCGGAGGATTCATCAATGAGCAT
AGACTACACAGCCATGGAATGCTCAAAGCATATGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCATGAGTA
TCAGTTTTCCCTTAATAGAAGCCTAAGCGAGCGTAAGATGGGTCATTTGCAAAATGTGAATGAGTACCACAAAGCAGAGT
TTGGAAGTGAAAGTGACATGGAGATTCAACAGGAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCGCCAGTTCG
GCCTCAGGAAGCAAAGAAAGAGATGCAGACAGACTATATCTTGAAGAAGCAAACTGCAAGAGACAAGCGGTTGAACATTC
CGGTTTTGAGCATCCAAGTTCTGGGAAGAAAATTGATCTGAACACTCAAAACACTGATGATGGTGATCAAGGGTATAGGC
ATTTTGATTTAAATGGCTTCAGCTGGAGCTGAATTGTTAATGATATGCAATATGATTGAAGAGAAGAAATGAGCATACAA
ATAATTTTTCCTGGCATTTTGAACACCATTATTTGGTGATTAAACTGTGTAGGTTAAGAAAAA-AATACTAGTACACCAG
AGTTCAACCATTGAGTATAGAAACTGAGATGTTATAGCTCAGCAGTTTAAATCTCTATTTCGAGAGGTTTAATACATATG
AATAGGATATCAAATCTGTA-TAATAAAAAAAGGAATAGGGATGAAATATAGGAATAGAATGCAGAAGGCAAAGATAGCT
AGAGAACCACCAACCGAGTAAGCGTCACACTTAATACAGGTAAACCATGGTGAGAAATACTCATCCATGTATATAATACA
ATTTCTCGGAATTTAAGCAGTAAGAATAGCAGGGACTACCAGAACCTTACCCTACCAAATAACACCGTTAAATCAATTTA
GTAACAGAAGCTATCCCTGCCATTATGCGGATACTTTCAGCTCAACACAGC-------TTAAAACAAAACCAAACAGTTT
ATCGATTGATGCAGACTTCACGAACACAACTGACATCTCAGAGAAGCATGTGTAGAATAAAGATGGAAGTAATTCGTCCG
CAGTCATCTCTGCACATCGTTCAACCAGCATATAAACTGATGCATCTATTCATCCACACAACGCAAACGATTTTTGAGGT
AAAGTCCATCGCAGCACTTATTTGCATACGATCAGCATCAGGCAAGGCAAGAGTCATTTATAGCATAATAATTCGATTAA
AAACTGCAAATGGAAGAGCAAAGCTATGTATAATCTTGGGGGGTGATGTGCATCACAAGTCATATAAGAAGACATGTATC
TATTCCTTTGTTCCTCTCCTTATTCTCATCTATACTTGCCACAAGAGCAAGAGCACTGTATTATAGAGTATGGAATA--A
TAACTAGAAAACTA-----GTTTATTATGGAGAGCAGTGAGCGCCGGTGTC----ATCCACTCATCGCTGCTACTACTAC
TACTTCTTGATC
>chr1B_1
GAGCTTATCCCATGTAAAGAGCATAAGCCAGTAGGTCCATACTTTTCTGGACTACAATGAGAATATGTACCAATCTCAGG
AAAGGACACTGATGGAACTTGTGCTTGTTCATATTCTATCCACTTTACAGTAGTACAAAGGACAGAATAAATTGACAGAA
AAATTGTGTTTCTGCACGTAAGATGTCACTCTCCAAGAAGGCAACAAGTATCAGCAATAAAAAAAATAACTTAATTGATT
CATTTAAACAAAGATACACATACTGTATTCCTCTAAGAACATTAAAATCATTGATCACATAACATGAACCAGCAACACTA
AACTAAGTACTTAGTAACTAAGGTAACAGAGAAGTTGCACAAATATTTCCATCTCGGCAAAATGAGTGATTCGGAAATGT
ATCTTTCACGCTCCAAGCAG--ATAGCAGATAATATGCCAAAAAATAACATTTCAGAAAGATAAATTGCTCCAGTTGTAG
GTATTTATTA------------------------------------TGTACATATACCTTCTACTGATCTAATGAGTAAA
ATATGCAGCTGAAGTTTCCATACAGAAATGCAGAGAAAGCTAAAGGACTAGTTTCATTACTGAGGGGGTACAAGGTTGAT
GTTACTCAGCTGTCACAGGTTGCTATTAGTACTGATA-TTTTCATTTTGGTTATTATTACCAAGAATAACTAAGGACAGC
ATCTTCTGTCAGTTGGGTTAAAGATTGTTCTTCTGCTGTTTGTTCTAAGATGCTAGATTCTATGTTTCCCCATATAAGGA
GCCCCTCACAGGGCATTGCTTACCAACCTGAGAAGACCAAAAGGGTATCAACAGGCTTAAGCTCACACGGAGAACAGGAC
TGGTATTCATCTTGTCAGTAGGGAAATACTCAATACACAGTTTCAACGTGCAACAGCAAAGAGGAAGGAAGCGACTGCAG
AACAAGTAAGAAGTTGGTTTGATCTTTCTGCCCTCCACATTTCTGTTGTTCTAACAATTTCTGTCCATTCTACAGCAGAA
GATGTATCACCAACATCAGGGCCCTAGTGAGCTCTTCACTACTAGGACGACCTTTCCCATGGAGAGGCATCTGTTTCTGC
ACGGAGGAAGTACGCAAGGAGATTCCGGGCTAGTTCTCTCAACCGATGCAAAACCAAGGCTGAAATGGACACCCGAGTTA
CATCAGCGATTTGTAGATGCGGTCAATCAATTGGGCGGAGCAGAAAGTTAGTATACGTCTATACGATTCTTATCTACTCA
TTGTACAGAAGTCCGCTGAATTCTTACACTCATATGTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTATG
GGCATTCCAGGACTCACCTTGTATCATCTGAAAAGCCACCTTCAGGTACATGATAATCATAAATTCTCATGTTAAAAATG
GCACCCATAACTGCAGTCAAGTCAGAATTTCTTTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGTT
AACGTTGGGACAAACAAGAACAGTAAGCCCAAGTTTAACTTCTATAGTTCTATCTTTACCATTATAATAAAACTGTATAA
TGACACACAGGCCATGAAATTTTGCAGCCATAGGATGTGCAATTGTAGCTGATGGCATGCCCGGAACAAGTGTGCCAGCG
ATGATCAATACAAATGTCATTCCACAGCCAGAGAAGTAAGGAAACTGG-CATGCAATTCAAAATTGTATTTCATGTGAAT
ATTGAAGTACTAATCTCTCTTACTGGGTGACAGAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAGA
GACAATTAAACGAACAACTCGAGGTGAGGTACTGAAACTAGTTGTGTAATAAGCTCTTAACCGAGACAATTCATTAGATG
CACACAGTAGATGGAAATCAAGATAACCTGAATCGAGCATCCAGCTACCACTCTCGTGCCGACCAAAGAAAAAACTGATA
ATGTATTCTAAATCCTTATTTGACCTCTTTGAACGCTGCGCTTCCTCCAGGGATGGCCCCATAAAACGAATATAATCTAG
CAATTAAAGAACCAAAAGAGAGAAAAAGCAATTTGGCACCACTCACTAAATTCGGATGCTTAATACCTTCTTCTAATGTA
GCAACGAACTTTTGTCAAATTCCAGCTAAGTAACACACCATGCATGCAGTGACTACAACATATCCATCAGTACAGTGGTT
CTAACCTGAAATTAAATTGGCAACAGGTACAACGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGCA
GTTCTAGAGCAGGCACAAGAGAGCCTTGGAAAACAGAATTTGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATATC
AGAACTAGTCTCACAAGTATCAAACGAATGTTTCAGCAATGCAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGAC
TAGAGCCAAGGCAAATCCAGTTCATGGAAAGTTCAACCAACAACTGTTTGACTGCAGCCGGAGGATTCATTAATGAGCAT
AGACTACACAGCCATGGAATGCTCAAAGCATATGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCGTGAGTA
CCAGTTTTCCCTTAATAGAAGCCTAAGCGAGCGTAAGATGGGTCATTTGCACAATGTGAATGAGTACCACAAAGCAGAGT
TTGGAAGTGAAAGTGACATGGAGATTCAACAGGAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCACCAGTTCA
GCCTCAGGAAGCAAAGAAAGAGATGCGGACAGACTATATCTTGAAGAACCAAACTGCAAGAGACAATTGGTTGAACATTC
AGGTTTTGAGCATCCAAGTTCTGGGAAGAAACTTGATCTGAACACTCAAAACACTGATGATGGTGATCACGGGTATAGGC
ATTTTGATTTAAATGGCTTCAGCTGGAGCTGAATTGTTAATGATATGCAATATGATTGAAGCGAAGAAATGAGCATACAA
ATAATTTTTCCTGGCATTTTCAACACCATTATTTGGTGATTAAACTGCGTAGGTCAAG-AAAA-AATACTAGTACACCAG
AGTTCAACCATTGAGTATAGAAACTGAGATGTTATGGCTCAGCAGTTTAAATCTCCATTTCGAGAGGTGTAATACATATG
AATAGGATATCAAGTCCGTAATAATAAAAAAGGGAATAGGGATGCAATATAGGAACAGAATGCAGAAGGCAAAGATAGCT
AGAGAACCACCAACCGAGTAAGCGTCACACTTAATACAGGTAAACCATGGTGAGAAATACTCATCCATGTA-ATAGTATA
ATTTCTCGGAATTTAAGTAGTAAGAATAGCAGGGACTACCAGAACCTTACCCTCCCAAATAACATGGTTAAATCAATTTA
GTAACAGAAGCTATCCC--------------GACTTTCAGCTCAACACAGCTTAAAAGTTAAAACAAAACCGAACAGTTC
ATCAATTGATGCACACTTCACGAACACAACTAATATCTCAGAGAAGCGTGTGTAGAATAAAGATGGAAGTAATTCGTCCG
CAGTCATCTGTGCACATCATTCAACCAGCATATAAAGTGATGTATCTGTTCGTCCACACAACATAAACGAGTTTTGAAGT
AAAGTACATCGCAGCACTTATTTGTATACCATCAGCATCAGGCAAGGCAAGAGTCACTTATTGCA---TAATTCAATTAA
AAACTGCAAATGAAAGAGCAAAGCTATGTATAATCTTGGGGTGTGATGTGCATCACAAGTGATATAAGAAGACATGCATC
TATTCCTTTGTTCCTCTCCTTATTCTCAACTATACTTGCCACAAGTGCAAGAGCACTGTATTATAGAGTACTATATGTGA
TAACTAGAAAACTACTGTAGTTTATTATGGAGAGCAGTAAGCGCTGGTGTC----ATCCACTCA----TGCTGCTACTAC
TACTTCTT----
>chr1D_1
GAGCTTATGCCATGTAAAGAGCATAAGCCAGTAGGTCCACACTTTTCTGGACTACAATGAGAATATGTACCAATCTCAGG
AAAGGACACTGATGGAACTTGTGCTTGTTCATATTCTATCCACTTTACAGTAGTACAAAGGACAGAATAAATTGACAGAA
AAATTGTGTTTTTGTGTGAAT--TGTCACTCTCCAAGAAGGCAACAAGTATCAGCAATGAAAAAAATAACTTAATTGATT
CATTTAAACAAAGATACACATACTGCATTCCTCTAAGAACATTAAAATCATTAATCACGTAACATGAACCAGCAACACTA
AACTAAA----TAGTAACTAAGGTAACAGAGAAGTTGCGCAAATATTTCCATCTCGGCAAAATGAGTGATTCGGAAAGGT
ATCTTTCATGCTCCAAGCAG--ATAGCAGATAATATGCCAAAAAATAACATTTTAGAAAGATAAATTGCTCCAGTTGTAG
GTATTTATTCTGTAAGATAAATTGCTCCAGTTGTAGGTATTTATTCTGTACACATACCTTCTACTGATCTAATGAGTAAA
ATATGCAGCTGAAGTTTCCATACAGAAATGCAGAGAAAGCTAAAGGGCAAGTTTCATTACTGAGGGG-TACAAGGTTGAT
GTTACTCAGCTGTCACAGGTTGCTATTAGTACTGATATTTTTTATTTTGGTTATTATTTCCAAGAATAACTAAGGACAGC
ATCTTCTGTCAGTTGGGTTAAAGATTGTTCTTCTGCTGCTTGTTCTAAGATGCTAGATTCTATGTTTCCCCATATAAGGA
GCCCCTCACAGGGCATTCCTTATCAACCTGAGAAGACCAAAAGGATATCAACAGGCTTAAGCTCACACGGAGAACAAGAC
TGGTATTCGTCTTGTCAGTAGGGAAATACTCAATACACAGTTTCAACGTGCAACAGCAAAGAGGAAGGAAGCGACTGCAG
AACAAGTAAGAAGTTGGTTAGATCTTTCAGCCCTCCACATTTCTGTTGTTCTAAAAATTTCTGTCCATTCTACAGCAGAA
GATGTATCACCAACATCAGGGCCCTAGTGAGCTCTTCACTACTAGGACAACCTTTCCTATGGAGAGGCATCTGTTTCTGC
ACGGAGGAAGTACGCAAGGAGATTCCGGGCTAGTTCTCTCAACCGATGCAAAACCAAGGCTCAAATGGACACCCGAGTTA
CATCAGCGATTTGTAGATGCGGTCAATCAATTGGGTGGAGCAGAGAGTTAGTATACATCTATATGATTCTTATCTACTCA
TTGTACAGAAGTCCGCTGAATTCTTACACTCAT--GTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTATG
GGCATTCCAGGACTCACCTTGTATCATCTGAAAAGCCACCTCCAGGTACATGATAATCATAAATTCTCATGTTAAAAATG
GCGCCCATAACTGCAGTCAAGTCAGAATTTCTTTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGTT
AACGTCGGGACAAACAAGAACAGTAAGCCCAAGTTTAACTTCTATAGTTCCATCTTTACCATTATAATATATCTGTATAA
TAACACACAGGCCATGAAATTTTGCAGCCATAGGATGTGCAATTGCAGCTGATGGCATGCCCGGAACAAGTGTGCCAGCG
ATGATCAATACAAATGTCATTCCACAGCCAGAGAAGTAAGGAAACTGGCCATGCAATTCAGAATTGTATTTCATGTGAAT
ATTGAAGTACTAATCTCTCTTAATGGGTGACAGAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAGA
GACAATTAAACGAACAACTCGAGGTGAGGTACTGAAACTAATTGTGTAATAAGCTCTTAACCAAGACAATTCATTAGATG
CACACAGTAGATGGAAATCAAGATAAC-TGAATCAAGCATCCAGCTACCACTCTCGTGCCAACCAAATAAAAAACTGATA
ATGTATTCTAAATCCTTATTTGACACCTTTGAACGCTGCGCTTCCTTCAGGGATGGCCCCATAAAAGGAATACAGTCTAG
CAATTAAAGAACCAAAAGAGCGAAAAAGCAATTTGGCATCACTCATTAAATTCAGATGCTTAATACCTTCTTCTAATGTA
GCAATGAACTTTTGTCAAATTCCAGCTAAGTAACACACCATGCATGCAGTGACTAAAACATATCCATCAGTGCAGTGGTT
CTAACCTGAAATTAAATTGGCAACAGGTACAACGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGCA
GTTCTAGAGCAGGCACAAGAGAGCCTTGGAAAACAGAATTCGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATATC
AGAACTAGTCTCACAAGTATCAAATGAATGTTTCGGCAGTGCAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGAC
TAGAGCCAAGGCAAATCCAGTTCATGGAAAGTTCAACCAATAACTGTTTGACTGCAGCCGGAGGATTCATCAATGAGCAT
AGACTACACAGCCATGGAATGCTCAAAGCATATGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCATGAGTA
TCAGTTTTCCCTTAATAGAAGCCTAAGCGAGCGTAAGATGGGTCATTTGCACAATGTGAATGAGTACCACAAAGCAGAGT
TTGGAAGTGAAAGTGACATGGAGATTCAACAGGAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCGCCAGTTCG
GCCTCAGGAAGCAAAGAAAGAGATGCAGACAGACTATATCTTGAAGAACCAAACTGCAAGAGACAAGCGGTTGAACATTC
AGGTTTTGAGCATCCAAGTTCTGGGAAGAAACTTGATCTGAACACTCAAAACACTGACGATGGTGATCAAGGGTATAGGC
ATTTTGATTTAAATGGCTTCAGCTGGAGCTGAATTGTTAATGATATGCAATATGATTGAAGAGAAGAAATGATCATACAA
ATAATTTTTCCTGGCATTTTCAACACCATTATTTGGTGATTAAACTGCGTAGGTGAAG-AAAAAAATACTAGTACACCAG
AGTTCAACCATTGAGTATAGAAACTGAGATGTTATGGCTCAGCAGTTTAAATCTCCATTTCGAGAGGTGTAATACATATG
AATAGGATATCAAATCCGTA-TAATAAAAAAAGGAATAGGGATGCAATATAGGAATAGAATGCAGAAGGCAAAGATAGCT
AGAGAACCACCAATCGAGTAAGCGCCACACTTAATACAGGTAAACCATGGTGAGAAATACTCATCCATGTATATAATACA
ATTTCTCGGAATTTAAGCAGTAAGAATAGCAGGGACTACCAGAACCTTACCCTCCCAAATAACACCGTTAAATCAATTTA
GTAACAGAAGCTATCCCTGCCATTATGGGGAGACTTTCAGCTCAACACGGC-------TTAAAACAAAACCAAACAGTTC
ATCAATTGATGCAGACTTCATGAAAACAACTACCATCTCAG------------AGAATAAAGATGGAAGTAATTCGTCCG
CAGTCATCTCTGCACATCGTTCAACCAGCATATAAACTGAGGTATCTATTCATCCACACAACACAAACAATTTTTGAGGG
TAAGTCCATCGCAGTACTTGTTTGTATATCAA------CAGGCAAGGCAAGAGTCACTTATTGCA---TATTT-AATTAA
AAACTGGAAATGAAAGAGCAAAGCTATGTATAATCTTGGGGTGTGATGTGCATCACAAGTGATATAAGAAGACATGTATC
TATTCCTTTGTTCCTCTCCTTATTCTCAACTATACTTGCCACAAGAGCAAGAGCACTGTATTATAGAGTATGC---A--A
TAACTAGAAAACTA-----GTTTATTATGGAGAGCAGTGAGCGCTGGTGTCTGTCATCCACTCATAGCTGCTACCACTAC
TACTTCTTGATC
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S---------------------------------------------------------S-------------
---------------S----------------------S-----------------------------------------
-----------SSSS-SS--------------------------------------------------------------
--------------------SS------------------------------S--------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S----------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S---------S------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
-----------------S-----------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S--------------------S---------------------------------------
----------------------------------SSSSS-SS--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S----------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
S------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------S--------------------------S------S---S---------------------
-----------------------------------S-------------------S------------S-----------
----------------S---------------------------S-----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
---------------------------S---S-----------------------------------------------S
---S---------------------------S---------------S--------------------------------
------------------------------------------S-------------------S-----------------
------------------------S----S--------------------------S----S---SSS------S-----
------------S----------------------------S------------------S-------------------
----------------------------S-------------------------------------------SS------
--------------------------------------------S--------------------S--------------
------------
>forward_421
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TCTTTCACGCTCCAAGCAGA-----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------
>reverse_1697
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CCATTCCACAGCCAGAGAAGT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------
>forward_422
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TCTTTCACGCTCCAAGCAGAT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_1860
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TGAGGTGAGGTACTGAAACTACT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>forward_1679
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CCGGAACAAGTGTGCCAGA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_3710
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------GATCAGCATCAGGCAAGGCA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
