>input_sequence_41111
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ATGGACTACTCAAATTTGCGTCGCCAAATTACCTTCATG
AAGAAAAGTTTCTTTGATCAGGTTTATTGGCTCCCCCTTTGTTCATTTGAAATCTGGGTTTATAATCAATTACTGTGTTG
CACATGTTAAGCTCTTCTCCCAAGAGCTGCAAGTTTTGACTGGATAACTTGTAAGCCGAATTACTCTCGTAGTGATTTTC
TTCTGATAGAATGATGACCTTTGGACATCTCCACATGACATATCCACTGAGGCTCTGAAAACTTT---CTACTGCATTTT
TTTCTTCCAAATATATGGAGTTTCTCTCTGGTGGCGGGACTCAATGGATTCTTCACTCATTCTGTTTCAAAATTTTACTT
AATTGCAACTGCATAACTCATTCACTTTGTAATCTGGTCTAATGGGACAATATGGGGGCAAATGCCAACTTGGATACTAT
TTTCCCACACAATAGTTATGGCACTCTTTTTTTTTCCACAAACGCATCGCCTGCTGAATGCATCATGATGTTTAAAATTA
GATATATGGGCAATGATGTAATAGACCATAAGAATAGAAAATCACTCTCTTTATTTCCTTCGTTCTATTCCTTTGAGAAT
ATACAAAAGGTTGGGGTGTTCAAACTTTACAGAGTAATCATAGAGGTAGG-TCATTTTGATGATACATTAGTATCTTCTA
GGCAAATATTAGGGTGCTCTTTATACCTAAGCCAGGTTGACACCTAAAACCACCTTGATGTAGCTGACTCAGTTTGATTT
TTGACAAATATTAAGGTGCTTGTTATACTTAGCTAGGTTGAAGCCTATAACAACTTGCTGGGACTTTGTTTGATATTTGA
ATAATTATTTTGATTTACCCATGTAATCGAGAATCTTTTTTTCTGCCGTGGACCACACTAATGGTATTTTATTATATGTT
GTATTTCAGGCTTCTTTGATTTGCCTAATAATCTACTTTGGGCTATTCCTGCAGGGTTACCTTGATGAACAGTTCAATCA
GCTGGAAGAACTGCAGGACGAATCAAGCCCCAATTTCGTTGAGGAAGTTGTGGCTTTGTTTCTGAAAGATTCGCCGAGAT
TGTTGTCAAACATAGAACAAACAATGTAAGCAATACGTCTGTAAGTCAGGCCATAACTGTC------TTTTTTTTGGCTG
GAACAGTCCATACAAATGGTTTCAAGACATATCATATCTACCAAAAATGGAATCATATTTAGTGCATTCACTTTCCAGTT
CCTTTTGATGCAGTGGGAAGTACCCTCAGGATTTCTACCGGTTAGATTCTCTTGTGCACCAGCTCAAAGGCAGCGGATCC
AGGTACAGGACCTGTGAATATGCTCAGAAAACACCCGGTGTGAATAATCTTATTGCGGGTCTCATCACCACAGAATCATC
CATTCAGTATATACATGATTTAAGAGTGCTTAGT---GATGTGAGAGAACGAATATTATTAGCAAATGGAAATGCTATCA
CCGACAGCTTTACCTTTTGCCTGCCTTATGTGTTCTGATTCACTGAAGTTGACTTGTGTTTGGCGCAGCATTGGAGCAGT
GAGGATGAAGAACGAGTGCTCGGTGTTTAAGGCACACTGCAATGACAGGAATCTGGAAGGGTATTGCATCACTCGTGCTT
TGCTTTCATCTCTTGTCGCCAGGCGATTTGCTCATCTCACCTGTTGTAGTGTGTCCATGGTTGTGCATCAGATGCCGCAG
GTCACTGCAGAAGATGAAGAGGGAGCATGCCACTCTGAAGCAGAAGCTGGAGTCATATTTTCAGGTACATTTGACACCTT
TCCCTTGAAAATCTTTCATGGTTAAACAACATTTTACTTATCTTGTATTTAATGCATGCCAATGATGATACAGTTACTGC
GGCAAGTCGGGCCTCGCGAGCATGCCGTGAACTCAAGGAAGTAAGAAGATAG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr1D_1_TraesCS1D01G123300
GAAGTTCCTGTTTCTATTCTACCTGTACCAATCAATCCAATCATCCATAGCATTCGAGTGTCGTAGCTCTAAGCTCATTG
ACGCTGACAAATTTCTATGCTTCAAGAAAATTCAGCTGTAGTAGGAAATACGTTTTTTCAGGATACATAAACTATGCCCT
GGAGATTCATTCTGTGTAACATAGTAAACAGCTTCAATCTTCAACACAGTGTAACGTTTTAGTTTGTCAAGAACCAATCT
TTAGAAGGTTTGCACAGAGTTTAGTACTCCCAGCTATTTGTTATGTAAGAATAAATGTCCTTTCTGTTTCTTATTCGCAG
GGAATTTTAGCTGTTGATGTCATTT-ATAGTCACTTAAATTCCTCCAAAACTCTTTAGTAGTAAATATCTTGTAAAGGTA
GAATTTTTTGATTTAGTGAATATGTTCTCCTTACATTAAACGCTCATCGTTCCCTCATTAACTTTTAATTTAGCCAAATT
GCTGGATCCCTGCTCTCTGACAAATATCTTGTAAAGGTATTTCGTAAATTTCAGTGGCAGACGTGGTTTCTTTATTTGTA
AAAAATTAACAGTGTAATTGGATATTTATAATTGTATCCTATCTAGAAATGTTTATTTATCTTATTTCTAGGTTTGCTTA
TTTGGGAACATGTTCTAGGGCACTTTACTTCTGCGCATTTCTGCGGTGCAGCGTCATCATATTCTGAAATCCTTTTCCTG
TCTAGGGTGTAAACCACACAAGCCACATGAAAGAGAACTCATAGATCAACTTGCAGAATTTGTAGTTGGGATTTTATTTC
AGCAGTTTCATGAAAAAGAAAAGTACTTTGTCTTTTTGTTATGCTTTATTCACAGGAGGACATTATCAATTGGAATAAAG
ATTTTGCATGCATAAATAAAATTCTGTTTCCCTCTATATATACGGCCTCCTTCGGTTTGCATGTCTCATTGCAGCCACCT
CAGTTCTCTGTGTGTGCTTGTACTGACATATAAGGCCAACTATGGACTACTCAAATTTGCGTCGCCAAATTACCTTCATG
AAGAAAAGTTTCTTTGATCAGGTTTATTGGCTCCCCCTTTGTTCATTTGAAATCTGGGTTTATAATCAATTACTGTGTTG
CACATGTTAAGCTCTTCTCCCAAGAGCTGCAAGTTTTGACTGGATAACTTGTAAGCCGAATTACTCTCGTAGTGATTTTC
TTCTGATAGAATGATGACCTTTGGACATCTCCACATGACATATCCACTGAGGCTCTGAAAACTTT---CTACTGCATTTT
TTTCTTCCAAATATATGGAGTTTCTCTCTGGTGGCGGGACTCAATGGATTCTTCACTCATTCTGTTTCAAAATTTTACTT
AATTGCAACTGCATAACTCATTCACTTTGTAATCTGGTCTAATGGGACAATATGGGGGCAAATGCCAACTTGGATACTAT
TTTCCCACACAATAGTTATGGCACTCTTTTTTTTTCCACAAACGCATCGCCTGCTGAATGCATCATGATGTTTAAAATTA
GATATATGGGCAATGATGTAATAGACCATAAGAATAGAAAATCACTCTCTTTATTTCCTTCGTTCTATTCCTTTGAGAAT
ATACAAAAGGTTGGGGTGTTCAAACTTTACAGAGTAATCATAGAGGTAGG-TCATTTTGATGATACATTAGTATCTTCTA
GGCAAATATTAGGGTGCTCTTTATACCTAAGCCAGGTTGACACCTAAAACCACCTTGATGTAGCTGACTCAGTTTGATTT
TTGACAAATATTAAGGTGCTTGTTATACTTAGCTAGGTTGAAGCCTATAACAACTTGCTGGGACTTTGTTTGATATTTGA
ATAATTATTTTGATTTACCCATGTAATCGAGAATCTTTTTTTCTGCCGTGGACCACACTAATGGTATTTTATTATATGTT
GTATTTCAGGCTTCTTTGATTTGCCTAATAATCTACTTTGGGCTATTCCTGCAGGGTTACCTTGATGAACAGTTCAATCA
GCTGGAAGAACTGCAGGACGAATCAAGCCCCAATTTCGTTGAGGAAGTTGTGGCTTTGTTTCTGAAAGATTCGCCGAGAT
TGTTGTCAAACATAGAACAAACAATGTAAGCAATACGTCTGTAAGTCAGGCCATAACTGTC------TTTTTTTTGGCTG
GAACAGTCCATACAAATGGTTTCAAGACATATCATATCTACCAAAAATGGAATCATATTTAGTGCATTCACTTTCCAGTT
CCTTTTGATGCAGTGGGAAGTACCCTCAGGATTTCTACCGGTTAGATTCTCTTGTGCACCAGCTCAAAGGCAGCGGATCC
AGGTACAGGACCTGTGAATATGCTCAGAAAACACCCGGTGTGAATAATCTTATTGCGGGTCTCATCACCACAGAATCATC
CATTCAGTATATACATGATTTAAGAGTGCTTAGT---GATGTGAGAGAACGAATATTATTAGCAAATGGAAATGCTATCA
CCGACAGCTTTACCTTTTGCCTGCCTTATGTGTTCTGATTCACTGAAGTTGACTTGTGTTTGGCGCAGCATTGGAGCAGT
GAGGATGAAGAACGAGTGCTCGGTGTTTAAGGCACACTGCAATGACAGGAATCTGGAAGGGTATTGCATCACTCGTGCTT
TGCTTTCATCTCTTGTCGCCAGGCGATTTGCTCATCTCACCTGTTGTAGTGTGTCCATGGTTGTGCATCAGATGCCGCAG
GTCACTGCAGAAGATGAAGAGGGAGCATGCCACTCTGAAGCAGAAGCTGGAGTCATATTTTCAGGTACATTTGACACCTT
TCCCTTGAAAATCTTTCATGGTTAAACAACATTTTACTTATCTTGTATTTAATGCATGCCAATGATGATACAGTTACTGC
GGCAAGTCGGGCCTCGCGAGCATGCCGTGAACTCAAGGAAGTAAGAAGATAGCATATGGAATGCAGTTCCAAGGGAACTA
AGGGACCAGCTACCTCTCTCCCTTGGGAGCTTTTATCATCCATAATTTTTGCTTGCTTTTAACCTGGGCCCTTTTGTTGT
TCATGGGTGGCCTAGTTCTTTGTTGTGTGAAGCTTGCTCATGCATACACAGCCCCTGCCTTGCTATGGGGAATGCCATGA
TGTAATCTAACTCCTTTCTTTTACGAATACGCCAAGCTTGCTTTCACGAATCATGTGTTGTACCACCCCTATGTAATCTA
ACTCCGAGTAGCTGTGCCCCAAATATAATGATACTAATATGAGTTGTGCCATACTGGAGTCTCTTCTCATGTGTTCGTTC
AGATTACAAATCATTGCAGTTAGCCTTCAAACTCAGGAGTAAACCCATTAATCTAGGAATCATAAGCCTTTTACTCCATA
TTTTCTTAAACCTGATGTCGCTGTGTTTCATACTTTCATGATTTTGGTAATAATATCGCTGTACTAGCATCATGTTGTTC
TGT--CAGAATTCATTAGAGAGAGCACGAAACGCTCGCTGGACGAATCAAAAGTAGCTCATTTCCGTCAAATAGTTGGCA
GTGGATTCCCTGGTATTGTCACTAAGTGGAGCACACATCCAATGATACCAACACTCACATCAGACCGTGATACTAACTCT
CGAATTTCAAACTCGGAAGTTCTCAAAAATATTGTCAATGTTTACATGATA--TGTGTCTATAATATCTTTCAAATCCGA
TTCAAAATACACATAAAGAAACAAAAGAAACTTTTAGCAGTTATAAACTTTTAGTAATCAAATTGAAGGCAGTAGGTTGG
AGAAAACTCTAGAATCTCTATCCTCTTACTCAGCTGCTATACATATAGATATATGCTACAGGTATGGGCCCTTTGGGCCA
TAACACACACACAAACACAACCCAACATTCCCCCTCAAGATGGGTGATAGATATCGGTCATCCCCATCTTGCTACATGCT
GAATCACACTTCCTAA
>chr1A_1
GAAGTTCCTGTTTCTATTCTACCTGTACCAATCAATCCAATCATCCATAGCATTCGAGAGTCGTAGCTCTAAGCTCATTG
ACGCTGACAAATTTCTATGCTTCAAGAAAATTCAGCTGTAGTAGGAAATACGTTTTTTCAGGATACAGAAACTACGCCCT
GGAGATTCATTCTGTGTAACATAGTAAACAGCTTCAATCTTCAACACAGTGTAACGTTTTAGTTTGTCAAGAACCAATCT
TTAGAAGGTTTGCACAGAGTTTAGTACTCCCAGCTATTTGTTATGTAAGAATAAATGTCCTTTCTGTTTCTTATTCGCAG
GGAATTTTAGCTGTTGATGTCATTTTATAGTCACTTAAATTCCTTCAATATTCTTTAGTAGTAAATATCTTGTAAAGGTA
GAATTTTTTTATTTAGTGAATATGTTCTCCTTGCATTAAACGTTCATCGTTCCCTCATTAACTTTTAATTTAGCCAAATT
GCCGGATCCCTGCTCTCTGACAAATATCTTGTAAAGGTATTTCGTAAATTTCAGTGGCAGACGTGGTTTCTTTATTTGTA
AAAGATTAACAGTGTAATTGGATATTTATAATTGTATCCTATCTAGAAATGTTTATTTATCTTATTTCTAGGTTTGCTTA
TTTGGGAACATGTTCTAGGGCACTTTACTTCTGCGCATTTCTGCGGTGCAGCGTCATCATATTCTGAAATCCTTTTCCTG
TCTAGGGTGTAAACCACACAAGCCACATGAAAGAGAACTCATAGATCAACTTGCAGAATTTGTAGTTGGGTTTTTATTTG
AGCAGTTTCATGAAAAAGAAAAGTACTTTGTCTTTTTGTTATGCTTTATTCACAGGA---CATTATCAATTAGAATAAAG
ATTTTGCATGCATAAATAAAATTCTGTTTCCCTCTATATATACGGCCTCCTTCGGTTTGCATGTCTCATTGCAGCCATCT
CAGTTCTCTCTGTGTGCTTGTACTGACATATAAGGCCAACTATGGACTACTCAAATTTGCGTCGCCAAATTACCTTCATG
AAGAAAAGTTTCTTTGATCAGGTTTATTTGCTCCCCCTTTGTTCATTTGAAATCTGGGTTTATAATCAATTACAGTGTTG
CACATGTTAAGCTCTTCTCCCAAGAGCTGCAAGTTTTGACTGGATAACTTGTAAGCCGAATTACTCTTGTGGTGATTTTC
TTCTGATAGAATGATGACCTTTGGACATCTCCACATGACATATCCACTGAGGCTCTGAAAACTTTGATCTACTGCATTTT
TTTCTTTCAAATATATGGAGTTTCTCTCTGGTGGTGGGACTCAATGGATTCTTCACTCATTCTGTTTCAAAATTTTACTT
CATTGCAACTGCATAACTCATTCACTTTGTAATCTGGTCTAATGGGACAATATGGGGGCAAATGCCAACTTGGATACTAT
TTTCCCACACAATAGTTATGGCACTCTTTTTTTTTCCACAAACGCATCGCCTGCTGAATGCATCATGATGTTTAAAATTA
GATATATGGGCAAGGATGTAATAGACCATACGAATAGAAAATCACTCTCTTTATTTCCTTCGTTCTATTCCTTTGAGAAT
ATACAAAAGGTTGGGGTGTTCAAACTTTACAGAGTAATCATAGAGGTAGGATCATTTTGATGATACATTAGTATCTTCTA
GGCAAATATTAGGGTGCCCTTTATACCTAAGCCAGGTTGACACCTAAAACCACCTTGATGTAGCTGACTCAGTTTGATTT
TTGACAAATATTAAGGTGTTTGTTATACTTAGCTAGGTTGAAGCCTATAACAACTTGCTGGGACTTTGTTTGATATTTGA
CTAATTATTTTGATTCACCCATGTAATCGAGAATCTTTTTTTCTGCCATGGACCACACAAATGGTATTTTATTATATGTT
GTATTTCAGGCTTCTATGATTTGCCTAATAATCTACTTTGGGCTATTCCTGCAGGGTTACCTTGATGAACAGTTCAATCA
GCTGGAAGAACTGCAGGACGAATCAAGCCCCAATTTCGTTGAGGAAGTTGTGGCTTTGTTTCTGAAAGATTCGCCGAGAT
TGTTGTCAAACATAGAACAAACAATGTAAGCAATACGTCTGTAAGTCAGGCCATAACTGTCGGTTTTTTTTTTTTGG-TG
GAACAGTCCATACAAATGGTTTCAAGACATATCATATCTGCCAAAAATGGAATCATATTTAGTGCATTCACTTTCCAGTT
CCTTTTGATGCAGTGGGAAGTACCCTCAGGATTTCTACCGGTTAGATTCTCTTGTGCACCAGCTCAAAGGCAGCGGATCC
AGGTACAGGACCTGTGAATATGCTCAGAAAACACCCGGTGTGAATAATCTTATTGCGGGTCTCATCACCACAGAATCACC
CATTCAGTATATACATGATTTAAGAGTGCTTAGT---G---TGAGAGAACGAATATTATTAGCAAATGGAAAGGCTATCA
CCGACAACTTTACCTTTTGCCTGCCTTATGTGTTCTAATTCACTGAAGATGACTTGTGTTTGGCGCAGCATTGGAGCAGT
GAGGATGAAGAACGAGTGCTCGGTGTTTAAGGCACACTGCAATGACAGGAATCTGGAAGGGTATTGCATCACTCGTGCTT
TGTTTTCATCTCTTGTCGCCAGGTGATTTGCTCATCTCACCTGTTGTAGTGTGTCCATGGTTGTGCTTCAGATGCCGCAG
GTCACTGCAGAAGATGAAGAGGGAGCATGCCACTCTGAAGCAGAAGCTGGAGTCATATTTTCAGGTACATTAGACACCTT
TCCCTTGAAAATCTTTCGTGGTTAAACAACATTTTACTTATCTTGTATTTAATGCATGCCAATGATGATACAGTTACTGC
GGCAAGTCGGGCCTCGCGAGCATGCCGTGAACTCAAGGAAGTAAGAAGATAGCATATGGAATGCAGTTCCAAGGGAACTA
AGGGACCAGCTACCTCTCTCCCTTGGGAGCTTTTATCATCCATAATTTTTGCTTGCTTTTAACCTGGGCCCTTTTGTCGT
TCATGGGTGGCCTAGTTCTTTGTTGTGTGAAGCTTGCTCATGCATACACAGCCCCTGCCTTGCT--GGGGAATGCCATGA
TGTAATCTAACTCCTTTCTTTTACGAATACGCAAAGCTTGCTTTCGCGAAACACGTGTTGTACCACCCCTATGTAATCTA
ACACCGAGTAGTTGTGCCCCAAATATAATGATACTAATATGAGTTGTGCCATACTGGAGTCTCTTCTCATGTGTTCGTTC
AGATTACAAATCATTGCAGCTAGCCTTCAAACTCAGGAGTAAACCCATTAATCTAGGAATCATAAGCCTTTTACTCCGTA
TTTTCTTAAACCTGATTTAGCTGTGTTTCATACTTTCATGATTTTGGTAATAATATCCCTGTACTAGCATCATGTTGTTC
TGTTTCAGAATTCATTAGAGG--GCACGAAAAGCTCATTGGACGAATT-AAAGTAGCTAATTTCCGTCAAATAGTTGGCA
GCGGATTCTCTGGTATTGCCACTAAGTGGAGCACACATCCAATGATACCAACACTCATATCAGACCGTGATACTAACTCT
TGAATTTCAAACTCGGAAGTTCTCAAAAATATTGTCAATGCTTACATTATACTTGTGTCTATAATATCTTTCAAATCCGA
TTCAAAATACACATAAAGAAACAAAAGAAACTTTTAGCAGTTATA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr1B_1
GAAGTTCCTGTTTCTATTCTACCTGTACCAATCAATCCAA---TCAATAGCATTCGAGTGTCGTAGCTCTAAGCTCATTG
ATGCTGACAAATTTCGATGCTTCAAGAAAATTCAGCTGTAGTAGGAAATACGTTTTTTCAGGATACAGAA-CTATGCCCT
GGAGATTCATTCTGTGTAACATAGTAAACAGCTTCAATCTTCAACACAGTGTAACGTTTTAGTTTGTCAAGAACCAATCT
TTAGAAGGTTTGCACAGAGTTTAGTACTCCCAGCTATTTGTTATGTAAGAATAAATGTCCTTTCTGTTTCTTATTCACAG
GGAGTTTTAGCTGTTGATGTCATTTTATAGTCACTTAAATTCCTCCAAAACTCTTTAGTAGTAAATATCTTGTAAAGGTA
GAATTTTTTGATTTAGTGAATATATTCTCCTTACATTAAACGCTCATCGTTCCCTCATTAACTTTTAATTTAGCCAAATT
GCTGGATCCCTGCTCTCTGACAAATATCTTGTAAAGGTATTTCGTAAATTTCAGTGGCAGATGTGGTTTCTTTATTTGTA
AAAGGTTAACAGTGTAATCGGATATTTATAATTGTATCCTATCTAGAAATGTTTATTTATCTTATTTCTAGGTTTGCTTA
TTTGGGAACATGTTCTAGGGCACTTTACTTCTGCGCATTTCTGCGGTGCAGCGTCATCATATTCTGAAATCCTTTTCCTG
TCTAGGGTGTAAACCACACAAGCCACATGAAAGAGAACTCATAGATCAACTTGCAGAATTTGTAGTTGGGTTTTTATTTC
AGCAGTTTCATGAAAAAGAAAAGTACTTTGTCTTTTTGTTATGCTTTATTCACAGGAGGGCATTATCAATTAGAATAAAG
ATTTTGCATGCATAAATAAAATTCTGTTTCCCTCTATATATACGGCCTCCTTCGGTTTGCATGTCTCATTGCAGCCATCT
CAGTTCTCTCTGTGTGCTTGTACTGACATATAAGGCCAACTATGGACTACTCAAATTTGCGTCGCCAAATTACCTTCATG
AAGAAAAGTTTCTTTGATCAGGTTTATTGGCTCCCCCTTTGTTCATTTGAAATCTGGGTTTATAATCAATTACTGTGTTG
CACATGTTAAGCTCTTCTCCCAAGAGCTGCAAGTTTTGACTGGATAACTTGTAAGCCGAATTACTCTCGTAGTGATTTTC
TTCTGATAGAATGATGACCTTTGGACATCTCCACATGACATATCCACTGAGGCTCTGAAAACTTTGATCTACTGCATTTT
TTTCTTTCAAATATATGGAGTTCCTCTCTGGTGGCGGGACTCAATGGATCCTTCACTCATTCTGTTTCAAAATTTTACTT
CATTGCAACTGCATAACTCATTCACTTTGTAATCTGGTCTAATGGGACAATATGGGGGCAAATGCCAACTTGGATATTAT
TTTCCCACACAATAGTTATGGCACTTTCTTTTTTTCCACAAACGCATCGCCTGCTGAATGCATCATGATGTTTAAAATTA
GATATATGGGCAAGGATGTAATAGACCATAAGAATAGAAAATCACTCTCTTTATTTCCTTCGTTCTATTCCTTTGAGAAT
ATACAAAAGGTTGGGGTGTTCAAACTTTACAGAGTAATCATAGAGGTAGGATCATTTTGATGATACATTAGTATCTTCTA
GGCAAATATTAGGGTGCCCTTTATACCTAAGCCAGGTTGACACCTAAAACCACCTTGATATAGCTGACTCAGTTTGATAT
TTGACAAATATTAAGGTGCTTGTTATACTTAGCTAGGTTGAAGCCTATAACAACTTGCTGGGACTTTGTTTGATATTTGA
CTAATTATTTTGATTTACCCATGTAATCGAGAATCTTTTTTTCTGCCGTGGACCACACAAATGGTATTTTATTATATGTT
GTATTTCAGGCTTCTTTGATTTGCCTAATAATCTACTTTGGGCTATTCCTGCAGGGTTACCTTGATGAACAGTTCAATCA
GCTGGAAGAACTGCAGGACGAATCAAGCCCCAATTTCGTTGAGGAAGTTGTGGCTTTGTTTCTGAAAGATTCGCCGAGAT
TGTTGTCAAACATAGAACAAACAATGTAAGCAATACGTCTGTAAGTCAGGCCATAACTGTC------TTTTTTTTGGCTG
AAACAGTCCATACAAATGGTTTCAAGACATATCATATCTACCAAAAATGGAATCATATTTAGTGCATTCACTTTCCAGTT
CCTTTTGATGCAGTGGGAAGTACCCTCAGGATTTCTACCGGTTAGATTCTCTTGTGCACCAGCTCAAAGGCAGCGGATCC
AGGTACAGGACCTGTGAATATGCTCAGAAAACACCCGGTGTGAATAATCTTATTGCGGGTCTCATCACCACAGAATCACC
CATTCAGTATATACATGATTTAAGGGTGCTTAGTGAAG---TGAGAGAACGAATATTATTAGCAAATGGAAATGCTATCA
CCGACAACTTTACCTTTTGCCTGCCTTATGTGTTCTGATTCACTGAAGTTGACTTGTGTTTGGCGCAGCATTGGAGCAGT
GAGGATGAAGAACGAGTGCTCGGTGTTTAAGGCACACTGCAATGACAGGAATCTGGAAGGGTATTGCATCACTCGTGCTT
TGTTTTCATCTCTTGTCGCCAGGCGATTTGCTCATCT----------AGTGTGTCCATGGTTGTGCTTCAGATGCCGCAG
GTCACTGCAGAAGATGAAGAGGGAGCATGCCACTCTGAAGCAGAAGCTGGAGTCATATTTTCAGGTACATTAGACACCTT
TCCCTTGAAAATCTTTCATGGTTAAACAACATTTTACTTATCTTGTATTTAATGCATGCCAATGATGATACAGTTACTGC
GGCAAGTCGGGCCTCGCGAGCATGCCGTGAACTCAAGGAAGTAAGAAGATAGCATATGGAATGCAGTTCAAAGGGAACTA
AGGGACCAGCTACCTCTCTCCCTTGGGAGCTTTTATCATCCATAATTTTTGCTTGCTTTTAACCTGGGCCCTTTTGTCGT
TCATGGGTGGCCTAGTTCTTTGTTGTGTGAAGCTTGCTCATGCATACACAGCCCCTGCCTTGCTATGGGGAATGACATGA
TGTAATCTAACTCCTTTCTTTCACGAATACGCAAAGCTTGCTTTTGCGAATCACGTGTTGTACCACCCCTATGTAATCTA
ACTCCGCGTAGCTGTGCCCCGAATATAATGATACTAGTA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>SNPs
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
-----------------------------------------------------------S-----------S--------
-----------------------------------------------------------------------------S--
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
S---------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------SSS---------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S---------------------------------------------------------------S-------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------S------------S-------S--------------------------
--------------------------------------------------------------------------------
-------------------S---------------------------------------------------------S--
----------------S-S--------------------------------------S----------------------
--------------------SSS--------S----SS---------SS---------S---------------------
-S------S---------S--------------------------------------S----------------------
S---------------------------------------S------S--------------------------------
---------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_958
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GCATGTCTCATTGCAGCCAC--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>reverse_2487
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GCTTTACCTTTTGCCTGCCT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>forward_970
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GCAGCCACCT
CAGTTCTCTG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>reverse_2707
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ATCAGATGCCGCAG
GTCAC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>forward_2643
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TTGCATCACTCGTGCTT
TGC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>reverse_3893
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATCGGTCATCCCCATCTTGC--------
----------------
