>input_sequence_41099
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-----------------------------------------ATGCCGCCCCGTCCCCCGCTCCGCTCGCCTCCGAGCGGC
GGCCCTTACACCACCGCGCCGCCGTCGCCGCCGCGCGCGGCCGAGCAGCACTGCCTGCGCCTCCTGGAGCGCGCCACGAC
GCCGGCGTCGCTCCTCCAGCCCCTCGCATTCCTCCTCAAGCACGGTCTCCACTCCAACCCGCTGGTCCTCACCAGGCTCT
TCTCGGCCGCGGGCTCCGCCGCGCCCGCGCTCCTCGAGCCCCTCGTCGCGGCGCTCCTCCGCCCGGGCCTCCCGCTCGAC
GCCTTCCTCCTCAACACCCTCATCCGCGCGCACGTCGCGTCCCCGCTCCCCTCCGCGCGCCGCCGCGCCGCGGCCTTCTT
CCCGCTCATGCTCCGCCGCGGCGTCGCCCCCAACAAGTTCACCTTCCCGTTCCTCCTCAAGTCCTGCGCCGCGATGCCGG
GGTCCCCGGCCGCCGGTCTCCAGGCCCACGCCGCCGCCCTCAAGTTCGGCTTCGCCGCCGACCACTACGTCTCCAACACG
CTCATACACATGTACTCCTGCTTCGGGGCCGGGTTCCTCGGGGACGCGCGGAACGTGTTCGACAGAACGCCCAAGGACAG
CGCTGTCACCTGGAGCGCGATGATCGGCGGGTACGTGCGTGGGGGGCTGTCGAGTGATGCTGTCATGCTGTTCCGGGAGA
TGCAGGCCAGCGGAGTGTGGCCGGATGAGGTGACAGTCCTCGGGGTCCTTTCGGCCGCCGCTGATTTGGGTGCACTCGAG
CTCACGCGGTGGGTTGAGCGGTTTGTGGCGAGGGAGGGAATTGGGAGGTCTGTGACGCTCTGCAATGCGCTGATCGACAC
GCTCGCCAAGTGCGGGGATGTCGATGGGGCAGTGGCTGTGTTCGAGGGGATGGAGGAGCGGACTGTTGTGTCATGGACGT
CGGTGATTGATGCACTTGCAATGGAGGGCCGTGGGAAAGAGGCTGTGGCTGTGTTCGAAGAAATGAAGGCTGTTGGCGTG
CCACCTGATGATGTCGCATTCATCGGGGTGCTCACTGCATGTAGCCATGCTGGAATGGTTGATGAAGGCCGTGGCTACTT
TGACTCAATGAAGACAGAGCATGGTATTGAGCCTAAGATCGAGCATTATGGTTGTATGGTCGACATGTTTGGCCGTGCCG
GCATGGTTGAGCAAGGGTTGGACTTTGTTCGCGCGATGCCCATGAAACCAAACCCAATAATTTGGCGGACTCTGGTTGCT
GCTTGTCGTGCTCATGGCCGGCTCGAGCTCGGTGAAAGCATTAGCAGGGACCTTCTTAAAGAGTACCCTGCTCATGAGGC
CAACTACGTCATGCTCTCCAACGTATTTGCATTGACGCAGAGATGGAAGGAGAAGTCAGAGATTAGAAGAGAGATGAGCA
AGAGAGGTATTACAAAGGTGCCAGGCTGCAGCCTTGTTGAACTTGATGGAGAGGTCCATGAGTTCATAGCAGGAGATGAG
TCGCATCCGCAGTACAAGGAGATATACAGGATGGTTGAGGAGATGTCAAGAGAGCTAAGACGCATTGGGCATATTGCAGC
CACATCAGAGGTCCTCCTTGACCTTGAT--------GAGGAGGAC---AAGGAGGGTGCGCTTCAGTGGCACAGTGAGAA
GCTGGCAATTGCATTCGTGCTCCTGAGGACTCCTCCTGGAACACAGGTCCGGGTGGTAAAAAA---CCTACGGGTATGCT
CCGATTGTCATGCGGCAATTAAGTGCATATCACAAGTTTATAACCGGGAGATCATAGTACGTGATAGGAGCCGTTTCCAT
CGCTTTAAGGATGGTTCCTGCTCCTGCAAGGATTTCTGGTGATTGGATTTGTGTTTCAC--CAGGTTATCCTT-TTTCTG
A-GGTGCAGTGAAGAGTGGATTGAACTTCAACAGCACGTGCAGGTGATCGTGAACTGA----------------------
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----------------------------------------------------------------------------
>chr5D_1_TraesCS5D01G493600
ATGATTCCTATTTGCGTTTTCTTT--TTCTCTGGAGGCATGCTATTTATTCACTTCATTTGCTTGATTATTACAAATCCC
AGTGTGGCTTCAAGATGTTCACTCGATCTGCTGCGAGGAAACTCTTTACAAACATCAGATTAAAGAGGTATTTTTTAA--
--GAAAAGGGAAATCCCACGATACTAT--------------AATATAATAATCTTGCAAGGAATGAACATGGAGGTT-TG
AGTGTTCATTCTGTTCTACTTTGTGCATGACCAGGTGGTGTTTTGATGTTGAGATTGTGTACCTATGCAAGCACCTGAGG
ATCCCGATGGCAGAAGTATCGGTCAGCTGGACGGAGATACCTGGGTCCAAAGTGCGCATGACAAGCATCCTGCACATGGT
GTTTGAGCTCCTGCTGATCAGAGTAGGCTATGGGCTGGGCATATGGAAAATTTACTCATAGACCCTGTTCTGGGTAACTC
ATTAGAGCTTAGGTCTCGATCGCTTCAGCGTATACACCAAACTTAGTTCGTCACTTTGAAACACAGCTACCAAATTAGTT
T-AAGGAGCATTGTAAAACTTTTTGAGATTTTCGACTGGAGAGAAGAATCCAGTTCGAAGTGTATGTTGGTGTTTGATCA
TAGCAAGATCTTGACATAT--------------------------------------GCTCACAGCTCACATGTATTTTT
-GCTCCTTCTGATAAATTCTCTGATTTTTTTGCTGTCTTTT--TTTTATCACATATTGCGCATGTTTCTCTT---AACTG
AAGAAAAGCAGCTTGTCTCTTCAGAGAGGCTGACAAAACTGTAACCTTATTTATCAAAA-CGGTCAGAGAAGATTAGCGT
GGTCTCTGTGCAAAATACTGCATTTCGCTTGGCTAAATTTCCAAAGTTGC-CAGTTCTGCTTGCATTGTGCACGGCTTCG
CTTC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AGAACGCACACGTTCGCGCCGTAGAGGAATCAGTT-GAGCACGCGAACACGCAGCGAAGATCAAA
A-CCGCAGGACCCACGGCTCGCCCGCCATGCGTTCGAGCAAATGCCGCCCCGTCCCCCGCTCCGCTCGCCTCCGAGCGGC
GGCCCTTACACCACCGCGCCGCCGTCGCCGCCGCGCGCGGCCGAGCAGCACTGCCTGCGCCTCCTGGAGCGCGCCACGAC
GCCGGCGTCGCTCCTCCAGCCCCTCGCATTCCTCCTCAAGCACGGTCTCCACTCCAACCCGCTGGTCCTCACCAGGCTCT
TCTCGGCCGCGGGCTCCGCCGCGCCCGCGCTCCTCGAGCCCCTCGTCGCGGCGCTCCTCCGCCCGGGCCTCCCGCTCGAC
GCCTTCCTCCTCAACACCCTCATCCGCGCGCACGTCGCGTCCCCGCTCCCCTCCGCGCGCCGCCGCGCCGCGGCCTTCTT
CCCGCTCATGCTCCGCCGCGGCGTCGCCCCCAACAAGTTCACCTTCCCGTTCCTCCTCAAGTCCTGCGCCGCGATGCCGG
GGTCCCCGGCCGCCGGTCTCCAGGCCCACGCCGCCGCCCTCAAGTTCGGCTTCGCCGCCGACCACTACGTCTCCAACACG
CTCATACACATGTACTCCTGCTTCGGGGCCGGGTTCCTCGGGGACGCGCGGAACGTGTTCGACAGAACGCCCAAGGACAG
CGCTGTCACCTGGAGCGCGATGATCGGCGGGTACGTGCGTGGGGGGCTGTCGAGTGATGCTGTCATGCTGTTCCGGGAGA
TGCAGGCCAGCGGAGTGTGGCCGGATGAGGTGACAGTCCTCGGGGTCCTTTCGGCCGCCGCTGATTTGGGTGCACTCGAG
CTCACGCGGTGGGTTGAGCGGTTTGTGGCGAGGGAGGGAATTGGGAGGTCTGTGACGCTCTGCAATGCGCTGATCGACAC
GCTCGCCAAGTGCGGGGATGTCGATGGGGCAGTGGCTGTGTTCGAGGGGATGGAGGAGCGGACTGTTGTGTCATGGACGT
CGGTGATTGATGCACTTGCAATGGAGGGCCGTGGGAAAGAGGCTGTGGCTGTGTTCGAAGAAATGAAGGCTGTTGGCGTG
CCACCTGATGATGTCGCATTCATCGGGGTGCTCACTGCATGTAGCCATGCTGGAATGGTTGATGAAGGCCGTGGCTACTT
TGACTCAATGAAGACAGAGCATGGTATTGAGCCTAAGATCGAGCATTATGGTTGTATGGTCGACATGTTTGGCCGTGCCG
GCATGGTTGAGCAAGGGTTGGACTTTGTTCGCGCGATGCCCATGAAACCAAACCCAATAATTTGGCGGACTCTGGTTGCT
GCTTGTCGTGCTCATGGCCGGCTCGAGCTCGGTGAAAGCATTAGCAGGGACCTTCTTAAAGAGTACCCTGCTCATGAGGC
CAACTACGTCATGCTCTCCAACGTATTTGCATTGACGCAGAGATGGAAGGAGAAGTCAGAGATTAGAAGAGAGATGAGCA
AGAGAGGTATTACAAAGGTGCCAGGCTGCAGCCTTGTTGAACTTGATGGAGAGGTCCATGAGTTCATAGCAGGAGATGAG
TCGCATCCGCAGTACAAGGAGATATACAGGATGGTTGAGGAGATGTCAAGAGAGCTAAGACGCATTGGGCATATTGCAGC
CACATCAGAGGTCCTCCTTGACCTTGAT--------GAGGAGGAC---AAGGAGGGTGCGCTTCAGTGGCACAGTGAGAA
GCTGGCAATTGCATTCGTGCTCCTGAGGACTCCTCCTGGAACACAGGTCCGGGTGGTAAAAAA---CCTACGGGTATGCT
CCGATTGTCATGCGGCAATTAAGTGCATATCACAAGTTTATAACCGGGAGATCATAGTACGTGATAGGAGCCGTTTCCAT
CGCTTTAAGGATGGTTCCTGCTCCTGCAAGGATTTCTGGTGATTGGATTTGTGTTTCAC--CAGGTTATCCTT-TTTCTG
A-GGTGCAGTGAAGAGTGGATTGAACTTCAACAGCACGTGCAGGTGATCGTGAACTGATGATGTATTTTCGAGGAGCTT-
-----CTGCAAGTCCTTGAGGTCTGCCAATTTATATGTAACACAAAGCTTTCAGTGGCCAAAAACTGATGTTTACTGAAG
ATTACTGGAAGCAGCATTAAAACATATAA-TATTCAGATACTTCA-----------------------------------
--------------------------------------------------------------------------------
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-------------CCTTGTGTACAAAATGCCTCATCAGTACACATTTAAGGACTAAGATTTCTTACAAAAACCCAGACCG
CCGAGAGAACATATCTAATGCATACCCCAGTTTGCATCCTGTTCGAATCATTTAATTAATCTAAACTTTTGAAGATACCA
TTCTATGCATAGACAAAATCCACGACATGTATTATGATAATACATAATAGTATGACTGCCTTTTGTTCATGCAGGGGCAG
ATAAATGCATCTCCCAATCTTGTGCTGTCTCAGTGGCCTATCTGAGTTTCATTGGCACTGTTCTAAGCCTTCCC-CAACC
ATCTCATTCTCCGTTGCTTCTTCATTCATGCAGTGAGTTTGTAACTAACCATGCATCTATGAAGTGTCTGCCATCTCGAT
GGTGTTGCTGATCTCGACCAATGCTTTGAGACTTTTCCTGTTCTTGTACGCCCTTGCCTTCCTGTTGTTGCAGAGAGCTG
TTAAGTCAATCTTAGCCTCCTTGCTCAAGTGACTGCATCATCATTTACTACAGGGGCTACAGGGGTAATATTTCTCTGCA
CTTCCCTTTGTAAAGTCTCCCATTTTGTAGGATTCTGCTTATCAATAGTCATGAAATTTGTTTGCACTGTAAGGATCGAA
CACATTCAAGTCCCTGCTTTCTTGTTTGCCTCTTCTCTAGTC--CTCTGCCAAAACATCCCACCCAGCCAATCTTATGAA
CCTCCTTGTTTCTGCTGTTAGATCCTCTAACCTTTTCGATACTGGAGTGATGTGCGTCTTATTTGCCTGTATGAGTGGAA
ACCAGAAATAAACATATGTTAATCTACAGGTCTAGTGCTTTAGTGTACTGTGGACCCATGTTCAGTAGTTACTTGA
>chr5A_1
ATGATTCCTATTTGCGTTTTTTCTTCTTCTCGGGAGGCATGCTATTTATTCGCTTCATTTGCTTGATTATTACAAATCCC
AGTGTGGCTTCAAGATGTTCACTCGATCTGCTGCAAGGAAACTCTTTACAAACATCAGACTTAAGAGGTATTTTTTTTTT
CTGAAAGGGAAAATCCCACGATACTATCTAGTA-----TATAATACAATAATCTTGCAAGGAATAAATCTGGA-------
--TGTTCATTCTGCCCTACTTACTGCATGGCCAGGTGGTGTTTTGATGTTGAGATTGTGTACCTATGCAAGCACCTGAGG
ATCCCGATGGCAGAAGTATCTGTCAGCTGGACGGAGATACCTGGGTCCAAAGTGCGCATGACAAGCATCCTGCACATGGT
GTTTGAGCTCCTGCTGATCAGAGTAGGCTATGGGCTGGGCATATGGAAAATTTACTCATAGACCCTGTCCTGGGTAACTC
ATTAGAGCTTAGGTCTCGATCGCTTCAGCGTATACACCAAACTTAGTTCGTCACTTTGAAACACAGCTACCAAATTAGTT
C-AAGGAGCATTGTAAAACTTTTTGAGATTTTCGACTGGAGAGAAGAATCCAGTTCGAAGTGTATGTTGGTGTTTGATCA
TAGCAAGATCTTGACATAT--------------------------------------GCTCACAGCTCACATGTATTTTT
-GCTCCTTCTGATAAATTCTCTGATATTTTTGCTGTCTTTTGTTTTTATCACAAATGGCACATGTTTCTCTT---AACTG
AAGAAAAGCAGCTTGTCTCTTCAGACAGTCTGACAAAATTGTTAACTTATTAATCAAAA-CGACCAGAGAAGATTATGGT
GGTTTCTGTGCAAAATATCGCAATTCGCCTGGCTAAATTTCGAAAGTTGC-CAGTTCTGCTTGCATTGTGCACGGCTTCG
CTTC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AGAACGCACATGTTTGCGCCGTAGAGGAACCAGTTTGAGCTCGAGCGCAAGCAGCGAAGGTCAAA
ACCCGCAGGACCCACGGCTCGCCTGCAATGCGTTCGAGCAAATGCCGCCCCGGCCCCCGCTCCGCTCGCCTCCGAGCCGC
GGTCCTTACACCACCGCGCCGCCGTCGCCGCCGCGCGCGGCCGAGCAGCACTGCCTCCGCCTCCTGAAGCGCGCCACGAC
GCCGGCGTCGCTCCTCCAGCCCCTGGCATTCCTCCTCAAGTGCGGCCTCCACTCCAACCCGCTCGTCCTCACCAGGCTCT
TCGCGGCCGCGGCCTCCGCCGCGCCCGCGCTCCTCGAGCCCCTCGTCGCGGCGCTCCTCCGCCCTGGCCTCCCGCTCGAC
GCCTTCCTCCTCAACACCCTCATCCGCGCCCACGTCGCGTCCCCGCTCCCCTCCGCGCGCCGCAGCGCCGCGGCCTTCTT
TCCGCTCATGCTCCGCCGCGGCGTCGCCCCCAACAAGTTCACCTTCCCGTTCCTCCTCAAGTCCTGCGCGGCGACGCCGG
GGTCCCCGGACGCCGGCCTCCAGGCCCACGCCGCCGCCCTCAAGTTCGGGTTCGCCGCCGACCACTACGTCTCCAACACG
CTCATACACATGTACTCCTGCTTCGGGGCCGGGTTCCTCGGGGACGCTCGGAACGTGTTCGACAGAACGCCCAAGGACAG
CGCCGTCACCTGGAGCGCCATGATGGGGGGGTACGTGCGTGGCGGGCTGTCGAGTGATGCCGTCGTGCTGTTCCGGGAGA
TGCAGGCCAGTGGTGTGCGACCCAATGAGGTGACGGTGATTGGGGTCCTTTCGGCCGCCGCTGATTTGGGCGCGCTCGAG
CTCACGCGCTGGGTTGAGCGGTTTGTGGAGATGGAGGGAATTGGGAGGTCTGTGACGCTTTGCAATGCGCTGATCGACAC
GCTCGCCAAGTGCGGGGATGTCGATGGGGCAGTGGCTGTGTTCGAGGGGATGGAGGAGCGGACTGTTGTGTCATGGACGT
CGGTGATTGATGCGCTTGCGATGGAGGGTCGTGGGAAAGAGGCTGTGGCGGTGTTCGAAGAAATGAAGGCTGTTGGAGTG
CCACCTGATGATGTCGCATTCATTGGGGTGCTCACTGCATGTAGCCATGCTGGAATGGTTGATGAAGGCCGTGGCTACTT
TCACTCAATGAAGACAGAGCATGGTATTGAGCCTAAGATTGAGCATTATGGTTGTATGGTTGACATGTTTGGTCGTGCTG
GCATGGTCGAGAAGGGGTTGGAGTTTGTCCGTGCGATGCCCATGAAACCAAACCTAATAATTTGGCGGACTCTGGTTGCT
GCTTGTCGTGCTCATGGTCGGCTCGAGCTTGGCGAAAGTATCAGCAGGGACCTTCTCAACGAGTACCCAGCTGATGAGGC
CAACTACGTCATGCTCTCCAACGTGTTCGCGTTGACGCAGAGATGGAAGGAGAAGTCAGAGATTAGGAGAGAGATGAGTA
AGAGAGGAATTACGAAGGTGCCAGGCTGCAGCATTGTTGAGCTTGATGGTGAGGTCCATGAGTTCATAGCAGGAGATGAG
TCGCATCCGCAGTACAAGGAGATATACAGGATGGTTGAGGAGATGTCAAGAGAGCTAAGGCGCATTGGGCATATTGCAGC
TACATCAGAGGTCCTCCTTGACCTCGAT--------GAGGAGGAC---GAGG---GTGCGCTTCAGTGGCACAGCGAGAA
GCTGGCGATTGCATTTGTGCTCCTGAGGACTCCTCCTGGAACACAGGTCCGGGTGGTAAAAAA---CCTACGTGTATGCT
CCGATTGTCATGCGGCGATTAAGTGCATATCGCAGGTTTATAACCGGGAGATCATAGTGCGTGATAGGAGCCGTTTCCAT
CGCTTCAAGGATGGTTCCTGCTCGTGCAAGGATTTCTGGTGATTGCAATTGTGTTTCAC--CAGGTTATCCTG-TTTCTG
ATGGTGCAGTGAAGGGTGGATTGAACTTCAACGGCACGTGCAGGCGATCGTGAACTCATGATGTATTTTCGAGGAACTT-
-----CTGCAAGTCCTCGAGGTTTGCCAATTTATATGTAATACAAAGCTTTCAGTGGCCAAAAACTGATGTTTACTGAAG
ATTACTGGAAGTAGCACTGAAACATATAAACATTCAGACACTTTATCTTGTGTACTGAATGTCTCACCAGTACACATTTA
AGGGCTAAGATTTCTTACAAGAACCTAGACTATTTTGCAAACATATCTAATGCGTCCCGAGTTTGCATCTTGTTCGAATC
ATGTAACCAATCTAAACTTTTGAAGATACCATTCTCTATGCATAGACAAACTTCATGACATGTATATATGATAACAGTAT
GATGCCTTTTGTTCATGCAGGGGCAGATAAATGTGTCTCCAAATCTTGTGCTCTCTCAGTGGCCTCTCTGAGTTTCTTTG
GCACTGTTCTAAGCCTTGTGTACTGAATGTCTCATCAGCACACATTCAAGGACTAAGATTTCCTACAAAAACCTAGACCA
TCGTGAGAACATTTCTAATGTGTACCCCAGCTTGCATCATGTACGAATCATCTAATTAATCCAAACTTTTGAAGATACCG
TTCTATGCATAGACAAACTTCATGACATGTATATATG------ATAATAGTATGA-TGCCTTTTGTTCATGCAGGGGCAG
ATAAATGCATG------TCTTCTGCTCTCTCAGTGGCCTCCCTGAGTTTCTTTGGCACTATTCTAAGCCTTTCCTCAACT
ATCTCATTCCCCATTGCTTCTTCATTCATGCAGTGAGTTTGTAACTTACTATGCATCTATGAACTGTCTGCCA-------
-----------------CCAATGCTTTGAAGCTTTCCCTGTTCTTGTACGCCCTTGCCTTCTCATTATTGCAGGGAGCTG
TTAAGTCAATCTCAGCCTCCTTGCGCAAGTGATCGCATCATCATTCACTACAGGGACTACATGGGTAATATTTCTCTGTA
CTTCCCTTTGTAGAGTCTCTCATTTTATAGGATTCTGCTT-TCAATAGCCAAGAAATTTGTTTCCACTGCATGGATCAAA
CACATTTAAGCCTGTATTTTCTTGTTCGCCTCTTCTGTGTCTAGCTCTGCCAGAACCTCCCACACAGCCAATCTTATGAA
CCTCCCTGTATCTGCTGTTAGATCA---AACCTTTTCGATATAGC-ATGATGTGTATCTTATTTGCCTGCATGGGTGGAG
T-CAGAAGTAAACATATGTTAATCTACAGGTCTAGTG--------TACTGTGGACCCGTGGTCAGTAGTTACT---
>chr5B_17
TTTTCTTC-----------------CTTCTTTGGAGGCATGCCATTCATTTGCTTTATTATTGTTAA------AAATCCC
AGTGTGGCTTCAAGATGTTCACTCGATCTGCTGCAAGGAAACTCTTTACAAACATCAGATTGAAGAGGTATA--TATTTT
CTGAAAAGGAAATCCTGTGATGCTCTATACATAAAATGTATATTCAAATAATCTTGTAAGGCATAAGCCTGAAGGATCTG
AGTGTTTATTTTCCTGTACTTTGTGCATGAACAGGTGGTGTTTTGATGTTGAGATTGTGTACCTATGCAAGCACCTTAGG
ATCCCGATGGCGGAAGTATCGGTCAGCTGGACGGAGATACCTGGGTCCAAAGTGCGCATGACAAGCATCCTGCACATGGT
GTTTGAGCTCCTGCTGATCAGAGTAGGGTATGGGCTGGGCATATGGAAAATTTACTCATAGACCCTGTTCTGGGTAACTC
ATTACAGCTTAGGTCTCGATCGCTGCGGCGTATACACCAAACTTAGTTCGTCACTTTGAAACACAGCTACCAAATTAGTT
CCAAGGAGAATTGTAAAACCTTGTGAGATTTTTCGGCTGGAG--AGAATCCAGTTCGGCGTGTATGTCGGTGTTTGATCA
TAGCGAGGTCGGCGTGTATGTCGGTGTTTGATCATAGCGAGGTCTTGACAGATGTAGGCTCACAGCTCACATGTATTTTT
TGCTCCTCCTGATAAATTCTCTGATTTTTTTGCTGTTT----TTTTTATCACAAATTGCACACGTTTCTCGTAAAAACTG
AAGAAAAGCAGCTTGTCTCTTCAGACAGTCTGATAAAATTGTAACCTTATTTATCAAAACCGACCAGAGAAGATTAGCGT
GGTTTCTGTGCAAAATCTTGCAATTCGCCCGGCTAAATTTCCATAGCTGCTCAGTTCTGCTTGCATCGTGCACGGCTTCG
CTCCATAACGCACATGTTTGCATTATTTTTGAATTTATTTCAGGATTTCTGGCAATGCGCGTTCATTATTTTTGGATTTA
TTTCTAAATTTACGGCGATGCGCATTCAGAGAAGTTTTTCTCGACTATGAGGCACCTGTGATGACTTCGTGAGATGCTCA
TAGGGTAGGGTATTCGTGTGTTCGTATGAATGAGTGTATGTGTGTATATATCAGCGTCTGGGTCTATACCGTGTTTAAAA
AAAAAAGAAAAAAGAAGAACGCACGTGTTTGCGCCGTACAGGAACCAGTT-GAGCTTGACCACACTCAGCGAAGGTCAAA
A-CCGCAGGAC----------CCCGCCACGCGTTCGAGCAAATGCCGCCCCCGCCACCGCTCCGCTCGCCTCCGAGCGGC
GGCCCTTACACCGCCGCGCCGCCGTCGCCGTCGCGCGCGGCCGAGCAGCACTGCCTGCGCCTCCTGGAGCGCGCCACGAC
GCCCAGTTCCCTCCTCCAGCCCCTCGCATTCCTCCTCAAGCGCGGCCTCCACGCCAACCCGCTGGTCCTCACCAGGCTCT
TCGCGGCCGCGGCCTCCGCGGCCCCCGCGCTCCTCGAGCCCCTCGTCGCGGCGCTCCTCCGCCCGGGCCTCCCGCTCGAC
GCCTTCCTCGTCAACACCCTCATCCGCGCCCACGTCGCCTCCCCGCTCCCCTCCGCGCGCCGCGCCGCCGCGGCCTTCTT
CCCGCTGATGCTCCGCCGCGGCGTCGCCCCCAACAAGTTCACCTTCCCGTTCCTCCTCAAGTCCTGCGCCGCGACGCCGG
GGTCCCCGGCCGCCGGCCTCCAGGCCCACGCCGCCGCCCTCAAGTTCGGGTTCGCCGCGGACCACTACGTCTCCAACACG
CTCATACACATGTACTCCTGCTTCGGGGCCGGGTTCCTCGGGGACGCGCGGAACGTGTTCGACAGAACGCCCAGGGACAG
CGCCGTCACCTGGAGCGCCATGATCGGCGGGTACGTGCGTGGGGGGCTGTCGAGTGATGCCGTCGTGCTGTTCCGGGAGA
TGCAGGCCAGCGGAGTGCGGCCGGATGAGGTGACGGTCCTCGGGATCCTTTCGGCCGCCGCTGATTTGGGTGCGCTCGAG
CTCACGCGGTGGGTTGAGCGGTTCGTGGCGAGGGAGGGAATTGGGAGGTCTGTGACGCTGTGCAATGCGCTGATCGACAC
GCTCGCCAAGTGCGGGGATGTCGATGGGGCAGTGGCTGTGTTCGAGGGGATGGAGGAGCGGACTGTTGTGTCATGGACAT
CGGTGATTGATGCACTTGCAATGGAGGGCCGTGGGAAGGAGGCTGTGGGGGTGTTCGAGGAAATGAAGGCTGTCGGTGTG
CCGCCTGATGATGTCGCGTTCATCGGGGTGCTCACTGCATGTAGCCATGCTGGAATGGTTGATGAAGGCCGTGGCTACTT
TGACTCAATGAAGACAGAGCATGGTATTGAGCCTAAGATCGAGCATTATGGTTGTATGGTCGACATGTTTGGTCGCGCCG
GCATGGTTGAGCATGGGTTGGAGTTTGTTCGCGCGATGCCCATGAAACCGAACCCAATAATTTGGCGGACTCTAGTTGCT
GCTTGTCGTGCTCATGGTCGGCTCGAGCTCAGTGAAAGCATCAGCAGGGACCTTCTTAAGGAGTACCCTGCTCATGAGGC
CAACTACGTCATGCTCTCCAACGTGTTCGCGTTGACGCAGAGATGGAAGGAGAAGTCAGAGATTAGGAGAGAGATGAGTA
AGAGAGGAATCACAAAGGTGCCGGGCTGCAGCCTTGTTGAGCTTGATGGAGAGGTCCATGAGTTCATAGCAGGAGATGAG
TCGCATCCGCAGTACAAGGAGATATACAGGATGGTTGAGGAGATGTCAAGAGAGCTAAGACGCATTGGGCATATTGCAGC
CACATCAGAGGTCCTCCTTGACCTTGAT--------GAGGAGGACAAGGAGG---GTGCGCTTCAGTGGCACAGTGAGAA
GCTGGCAATTGCATTCGTGCTCCTGAGGACTCCTCCTGGAACACAGGTCCGGGTGGTAAAAAA---CCTGCGTGTATGCT
CCGATTGTCATGCGGCAATTAAGTGCATATCGCAGGTTTATAACCGGGAGATCATAGTGCGTGACAGGAGTCGTTTCCAT
CGCTTCAAGGATGGTTCCTGCTCGTGCAAGGATTTCTGGTGATTGGAATTGTGTTTCAC--CAGGT-ATCCTG-TTTCTG
ATGGTGCAGTGAAGAGTGGATTCAACTTCAACAGCACATGCAGGTGACCGTGAACTCATGATGTATTTTCAAGGAATTTC
TGCAACTGCAAGTCCTTGAGGTTTGCCAATTTATATGGAACACAAA----------GCCAAAAACTGATGTTTACTGAAG
ATCACCGGAAGTAGCATTGAAACATATAA-TATCCAGATACTTCA-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------CCTTGAGTACTGAATGTCTCATCAGCACACATTTATGGACTAAGATTTCCTACAAAAACCTAGACCA
TCGTGAGAACATTTCTAATATGTGCCCCAGCTTGCATCCTGTCTGAATCATCTAATTAATCCAAACTTTTGAAGATACCA
TTCTATGCATAGACAAACTTCATGACATGTATATATG------ATAATAGTATGA-TGCCTTTTGTTCATGCAGGGGCAG
ATAAATGCATG------TCTTCTGCTCTCTCAGTGGCCTCTCTGAGTTTCTTTGGCACTATTCTAAGCCTTTTCTCAACT
ATCTCATTCTCCATTGCTTCTTCATTCATGCAGTGAGTTTGTAACTTACCATGCATCTATGAACTGTCTGCCATCTCTAT
GATGTTGCTGATCTCGGCCAATGCTTTGAAGCTTTCCCTGTTCTTGTACGCCCTTGCCTTCTCATTATTGCAGGGAGCTG
TTAAGTCAATCTCAGCCTCCTTGCGCAAGTGATCGCATCATCATTCACTACAGGGACTACATGGGTAATATTTCTCTGTA
CCTCCCTTTGTAGAGTCTCTCATTTTATAGGATTCTGCTT-TCAATAGCCAAGAAATTTGTTTCCACTGCATGGATCAAA
CACATTTAAGCCTGTGTTTTCTTGTTTGCCTCTTCTGTGTCTAGCTCTGCCAAAACCTCCCACACAGCCAATCTTATGAA
CCTCCGTGTATCCGCTGTTAGATCA---AACCTTTTCGCTATTGC-GTGATGTGCATCTTATTTTCC-------------
----------------------------------------------------------------------------
>chr2A_2562
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--CATCAGAGGTCCTCCTTGACCTTGACGAGGACTCGAGGAGGACAAGGAAG---GTGCGCTTCAGTGGCACAGTGAGAA
GCTCGCAATTGCATTCATGCTCCTGAGGACTCT---TGGAATACAGGTTCGGGTGGTAAAAAAAACCCTGCGACTATGCT
CTGGTTGTCATGCAACAATTAAGTGCATATCACAGATTTATAACTAGGAGATGACAGTACGTGATAGGAGTCGTTTCCAT
CGCTTCAAGGATGGTTCCTGCTCTTGCAAGGATTTCTGATGATTATAACTGTGTTTCACACCAGGTTATCCTGTTTTCTG
ATGGTACAGTGAAGAGTGGAGTGAACTTCAACGGCAAGTGCAGGTGGTCGTGAACTTATGATGTATTTTTGAGGAGCTT-
-----CTGCAAGTCCTCGAGGTTTGCCAAT----ATGTAACATAAAGCTTTCAGTGGCCAAAAACTGATGTTTACTGAAG
ATTACTGGAAGTAGCACTGAAACATATAA-CATTCAGACACTTTATCTTGTGTACTGAATGTCACACCAGTAGACATTAA
--------------------------------------------------------------------------------
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-----------------------------------------------------TAAGATTTCATACAAAAACATAGAACA
TTTTGCAAACATATCTAATGCGGGCCCCAGTTTGCATCCTGTTCGATTCAGATAACTAATCTAAACTTTTGAAGATACCA
TTCTCTGCATAGACAAACTTCATGACATGCATATATG------ACAA---------------------------------
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----------------------------------------------------------------------------
>SNPs
--------------------S-S----------------------------S----------------------------
----------------------------------S--------------------------S--------------SS--
---------S-----------------------------------S------------------S---S------S----
-------------S------------------------------------------------------------------
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--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S-----S--------------------
-------------------------S--S---------S-----------------------SS----------------
---S-------------S----S-----S---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------S---S--------------S----------S--S-S-------------S-----
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
-----------------------------------------S---S----------------------------------
--S---------S-------------------------------------------------------------------
-----------------------------S---------------------------------S----------------
--------------------------------------------------------------------------S-----
----------------S--------------------------------S------------------------------
--------------------------------------------------------------------------------
---S--------------S-----------------------------------------S---S---------------
-----------------S----------------S--------------------------------------S------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-------------------------------------------------S--------------------------S---
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-------------S--------S---------------------------------------------------------
-----------------S-----------------------S-----------------S--------------------
------------------------S--S--S-----------------------------------S-----------S-
-------S--------------------------------S---------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S---SSS-------------------------
------------------------------------------------------------------------S-------
----------------------------------S---------------------------------------------
-----S-----------------S-----------------------S------------------------S-------
--------------------------------------------------------S-----------------------
----------------------S---------------------------------------------------------
-----------S------S-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------SS----S--------S-----------------------S----------S-----S
S--S-----------------S-----------------------------S----------------------------
-----------------S-S--S---------SSSSSSSSSSS------------S------------------------
----------SSSSSSS----S----S------------S----------S--------S-----------S-------S
------------S---------------------------------S----------------S-------------S--
-S--------------S------------SS----S-------------------------SSS--S------S------
------------S-----------S-------SS-----------S---------S-----S----------------S-
------------S------S------S-------------S-------S--S-----------S-----S-S-----S--
------S---S-SS--S-------------------S-SSSS--------------S------S----------------
-----S---S--------------SSSS-------------S--SS---------S-------------S---S-----S
SS-----S-----------------------------SSSSSSSS------------S--S------------SSS
>forward_1226
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------CTTCGCTTCAGAACGCACAC------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2668
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TGCATTGACGCAGAGATGGA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_1486
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CATTCCTCCTCAAGCACGGT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_3754
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CAGACCG
CCGAGAGAACATA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
