>input_sequence_41070
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--------------------------------------------------------------ATGGCGTCCTCCGGGCTG
CTCCTTTTCCTCGGCTGCCTCGCGTCCGCCCTGCTCGCCGGCGCCACCAAAGTGCACCACCACGAGTTCATCGTACGTCA
TCCTATTCCTAGCTACCTCCCTGTCTCTCCTACTAGCAATGCAGACCATGGTTCTAAGCAACATTTCTGGGGTACGGCTT
TGCTGATTGTTTGTTTTGTGTTG-TGAAGGTCCAAGAGACGCCGGTGAAGAGGCTGTGCGAGGAGCACAACATCATCACG
GTGAACGGGCAGTTCCCGGGGCCGACGCTGGAGGTCCGGGAGGGGGACACGCTGGTCGTCAACGTCGTCAACCAGGCGCA
GTACAACGTCACCATCCACTGGCACGGCATCCGGCAGTTCAGGACGGGGTGGGCGGACGGGCCCGAGTTCGTGACGCAGT
GCCCCATCAAGCCCGGCGGCAGCTACAAGTACCGCTTCACCATCGAGGGCCAGGAGGGCACCCTGTGGTGGCACGCCCAC
AGCTCCTGGCTCCGGGCCACCGTCTACGGCGCGCTCATCATCCGGCCCCGGGAGGACAAGCCCTACCCCTTCGACAAGCC
CGCCCGCGAGGTCCCCATCCTCCTCGGCGAGTGGTGGAACGCCAACCCCGTCGAGGTCATCCGCGAGGCGCAGAGGACCG
GCGGCGCGCCCAACGTCTCCGACGCCTTCACCGTCAACGGCCAGCCCGGCGACCTCTACAACTGCTCCCGCCAAGGTACC
GCTA---GCTACTGATCTCGCTGGCGATCGATGC----AGCCATCGTGCGTGACACGAACATGTAAACTGACGAC---GT
GTGTGTCGTTCGCTTTGGCTCTTGGCAGACACCACGGCGATCTCGGTGAAGCCCGGGGAGACGGCGCTGCTGCGGTTCAT
CAACTCTGCGCTCAACCATGAGCTCTTCGTCTCCATCGCCAGCCACAAGATGACGGTCGTCGGCGTCGACGCGTCCTACA
CCAAGCCGTTCGTCACCTCCGTGCTCATGATCGCGCCGGGCCAGACCACCGACGTGCTCGTCACCATGGACCAGGCGCCC
ACGCGGTACTACATCGCCGCGCGCGGCTACGTCACCACGCAGGGCGTGGCGTTCGACAACACCACCACCACCGCCATCCT
CGAGTACGACTGCGGCTGCACCACCGACTTCGGCCCCTCGATCCCGCCGGCGTTCCCGACCCTCCCGGCCTTCAACGACA
CCGGCGCCGCCACGGCCTTCGCCGCGGGCATCAAGAGCCCGCGAAAGGTCGAGATACCCAGCCCC---------GTCGAC
GAGAACCTCTTCTTCACCGTCGGCCTCGGGCTGTTCAACTGCGAGCCGGGGCAGCTGTGCGCCGGGCCGAACAACAACAC
CCGCTTCACGGCCAGCATGAACAACGTCTCGTTCGTCTTCCCCAAGGCCACCTCCCTCCTCCACGCGCACTACTACGACA
TGCCG---------GGCGTGTACACCACCGACTTCCCGGCCAACCCGCCGGTGCAGTTCGACTACACGGCGCAGAACGTC
AGCCAAAGCCTGTGGCAGCCGATCCCGGCGACCAAGCTGTACAAGCTCAGGTTCGGCTCCGTGGTGCAGGTCGTCCTGCA
GGACACCAGCATCGTCACGCCGGAGAACCACCCCATCCACCTCCACGGCTACGACTTCTACATCCTCGCCGAGGGCTTCG
GCAACTACGACGCCGAGAAGGACGCCGCGAAGTTCAACCTCGAGAACCCACCGCAGAGGAACACCGTGGCGGTGCCGGTG
AACGGCTGGGCGGTCATCCGGTTCCGCGCCGACAACCCGGGGGTGTGGCTCATGCATTGCCATCTCGATGTGCACATCAC
CTGGGGCCTGGCAATGGCGTTTCTGGTCGAGGACGGGTATGGCGAGCTACAGTCACTGGAGGCGCCTCCAGTTGATCTTC
CAATGTGCTAA---------------------------------------------------------------------
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------------------------------------------------
>chr3B_1_TraesCS3B01G379900
AAAGTAATCCATATTTACCCAAAAGTCATCTTCTGCTCCCGAGCTCATTTGAGCTCGGGATGAACAGTAAAATCCAAAGA
AAATGAAAAAAAAGGTTCAAAAAATCTGAATTTATTTATGCAAACATTGACAAAGTTTTACGTGCTTGCAAAATCTCATC
TTGAAAAGACATTTCTGAAAGTCATGGCAAAAAAACAAAATCAGCACTTCAAAATGCTTTTGAAGATAATATTTTTGGAG
TATCAATTTTGTTTCTTCCACGGCTTTCAAAAATGTGATTTCAAGATCTTGAAATTTTGTGAGCACGTAAATATTTTGTC
AATGTTTGCACCCAAAAAAATATCAATTTTTTTTTTCAAAATTTTCGATTTTTTCTGTTCACCCGAGCTCGTTTGAGCTC
GGGCTAGAAACTCCACGTCCCTATATACCGACCGTTAATGTCATTTTGCT--ATGACTACCGACCGTTAAATGAGCAATA
ATGTTTCCAGACA-GACGCAGATCAAGTGAGTCGTGTAACCGAACTGGATGTGACACACATG-AAAAGCACGGTGGAAAG
TAAAACGCACCTTTCGTGTCATTCTCAAGTAAGTCGCTTGCTCCGTGAAACCACTGCGCATGCGCCAACCGGGGGCACTC
CAGTGGGTGCACCAAACCATCTGCAGGGTTGACATGACACACGAGGGCTTCGATCGAAGCAGGTCACTTCGATGC-----
---AGCATGGCCGCCCGCGAAAAGCTTCCCCACGCAGAAAAATCACAACCTAATCGATCAACCCGCAGCTGCAGGCCG--
-GACGGCAGGAACACGACGACGAGCGCATTTGAACCCTGCTCCTC-------CGAACGCTATATATACCGCCCCCTCGAC
GCTGGAAGTCTCATCGCCAACTCAACTCGAGCCTTCAGCCACAACAAGAAGACCTTCTCTAGCTAGCTAGCACCCCATCT
CAGAGAGCGCCGGCGTAGACGAGGAGATCGGCGATCACCGATCAGCGATCGGTGGACCGGCAATGGCGTCCTCCGGGCTG
CTCCTTTTCCTCGGCTGCCTCGCGTCCGCCCTGCTCGCCGGCGCCACCAAAGTGCACCACCACGAGTTCATCGTACGTCA
TCCTATTCCTAGCTACCTCCCTGTCTCTCCTACTAGCAATGCAGACCATGGTTCTAAGCAACATTTCTGGGGTACGGCTT
TGCTGATTGTTTGTTTTGTGTTG-TGAAGGTCCAAGAGACGCCGGTGAAGAGGCTGTGCGAGGAGCACAACATCATCACG
GTGAACGGGCAGTTCCCGGGGCCGACGCTGGAGGTCCGGGAGGGGGACACGCTGGTCGTCAACGTCGTCAACCAGGCGCA
GTACAACGTCACCATCCACTGGCACGGCATCCGGCAGTTCAGGACGGGGTGGGCGGACGGGCCCGAGTTCGTGACGCAGT
GCCCCATCAAGCCCGGCGGCAGCTACAAGTACCGCTTCACCATCGAGGGCCAGGAGGGCACCCTGTGGTGGCACGCCCAC
AGCTCCTGGCTCCGGGCCACCGTCTACGGCGCGCTCATCATCCGGCCCCGGGAGGACAAGCCCTACCCCTTCGACAAGCC
CGCCCGCGAGGTCCCCATCCTCCTCGGCGAGTGGTGGAACGCCAACCCCGTCGAGGTCATCCGCGAGGCGCAGAGGACCG
GCGGCGCGCCCAACGTCTCCGACGCCTTCACCGTCAACGGCCAGCCCGGCGACCTCTACAACTGCTCCCGCCAAGGTACC
GCTA---GCTACTGATCTCGCTGGCGATCGATGC----AGCCATCGTGCGTGACACGAACATGTAAACTGACGAC---GT
GTGTGTCGTTCGCTTTGGCTCTTGGCAGACACCACGGCGATCTCGGTGAAGCCCGGGGAGACGGCGCTGCTGCGGTTCAT
CAACTCTGCGCTCAACCATGAGCTCTTCGTCTCCATCGCCAGCCACAAGATGACGGTCGTCGGCGTCGACGCGTCCTACA
CCAAGCCGTTCGTCACCTCCGTGCTCATGATCGCGCCGGGCCAGACCACCGACGTGCTCGTCACCATGGACCAGGCGCCC
ACGCGGTACTACATCGCCGCGCGCGGCTACGTCACCACGCAGGGCGTGGCGTTCGACAACACCACCACCACCGCCATCCT
CGAGTACGACTGCGGCTGCACCACCGACTTCGGCCCCTCGATCCCGCCGGCGTTCCCGACCCTCCCGGCCTTCAACGACA
CCGGCGCCGCCACGGCCTTCGCCGCGGGCATCAAGAGCCCGCGAAAGGTCGAGATACCCAGCCCC---------GTCGAC
GAGAACCTCTTCTTCACCGTCGGCCTCGGGCTGTTCAACTGCGAGCCGGGGCAGCTGTGCGCCGGGCCGAACAACAACAC
CCGCTTCACGGCCAGCATGAACAACGTCTCGTTCGTCTTCCCCAAGGCCACCTCCCTCCTCCACGCGCACTACTACGACA
TGCCG---------GGCGTGTACACCACCGACTTCCCGGCCAACCCGCCGGTGCAGTTCGACTACACGGCGCAGAACGTC
AGCCAAAGCCTGTGGCAGCCGATCCCGGCGACCAAGCTGTACAAGCTCAGGTTCGGCTCCGTGGTGCAGGTCGTCCTGCA
GGACACCAGCATCGTCACGCCGGAGAACCACCCCATCCACCTCCACGGCTACGACTTCTACATCCTCGCCGAGGGCTTCG
GCAACTACGACGCCGAGAAGGACGCCGCGAAGTTCAACCTCGAGAACCCACCGCAGAGGAACACCGTGGCGGTGCCGGTG
AACGGCTGGGCGGTCATCCGGTTCCGCGCCGACAACCCGGGGGTGTGGCTCATGCATTGCCATCTCGATGTGCACATCAC
CTGGGGCCTGGCAATGGCGTTTCTGGTCGAGGACGGGTATGGCGAGCTACAGTCACTGGAGGCGCCTCCAGTTGATCTTC
CAATGTGCTAATGACCGGCAAAGATACAAACACCAGGGATATTGAAGGCTGCCCACACGTTCTATTCTCAGTTCCTGCCA
TTTGGGGGGTATTTGTGATCTTTATTTTGTACTTCTACTAGGGGTTTTGATTTTCCACCATGATTTGTAACATTCCCCTG
TAAATTTGCGTATTTTCAGTGATTCATCAGCTTATTATTTAAAATGAACTTTCATGTGATATCAGTAACTACAGCAAAGA
TCGAAATGTGCTGATTTGAAAGAGAAAAAACATCATCGATTAGCCACGACTCATATGTGGAGGAC---------------
------------------TGATATATCGACGTGATACAATTGAACTGAGTGAATGT---CCGGCCTCTGCATATTACACA
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ACAACTCGTTCAAACAATAACAAAAACAA----------ATATTTTACAA
CAAAAAACGCCAACCTAAGATGAGGTAGATTCTATCC-AAGAGTA-TACCATCATCCATGATGGGAGAAAAACTTTCTGA
CCCTATGCTTCAGTCGGGTTGACGTTATCATAAATGGGTTGATGTCCTCTAGTCTTCGCAGGATAGACCAAATACGAAGC
CATCGCGTACTGAAAGCACGTTTGATTACTTGGTGGTTTTGGTAATTCATGTCAACATATATATTATCGGACTAATGTTT
TCAGTTTTCTTGCCATTAATAACGGGACATGACAAGACGTGGGCTGGCGACGCCTCGATAACTAGAGCGCAAAGCTCAAG
ATGAGGTACCCCGAAACTATGAAGTCACGGTACCTAGGCATGCAGATCTCAAGGCGCGACACTCCAAAACAATGAAGAAC
ATGCAGGTGGACATACAACCTAATGCCACAAAGGCCTCAGGATAAATGGAGCACGCTGGGAAGCCCGAGCCCTCGGAGCT
CCCTGCTGGTCATTCTGAACTCATAAAGGTGTTGTTCCACAAGCCGTGCACTCAGTAGGCTCGAAAACCCCTTGACGTTG
GACTCGTGAAGACATGCCACGGTTGTTGAGGAGCCCGCATGCGTTTTC
>chr3D_418
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------TCCCTATTTACCGACCGTTAATGTCATTTTTTGCGATGACTATCGACTGTTAAATGAGCAATA
ATGTTTCCAGACTCGAGGCAAATCAAGTGAGTCGTATAACCGAACTGGATGTGACAGACATC-AAAAGCACGGTGGAAAG
TAAGACGCACCTTTCGTGTCATTCTCAAGTAAGTCGCTTGCTCCGTGAAACCACTGCGCATGCGCCAACCGGGGGCAGTC
CAGTGGGTGCACCAAACCATCTGCAGGGTTGACATGACACACGA-GGCCTCGATCGAAGCAGGTCACTTCGATCGATGCA
GCTAGCATGGCCGCCCGCGAAAAGCTTCCCCACGCAGAAAAATCACAACCTAATCGACCAACCCGCAGCTGCAGGCCG--
-GACGGCAGGAACACGACGACGAGCGCATTTGAACCCTGCTCCTC-------CGAACGCTATATATACCGCCCCCTCGAC
GCTGCAAGTCTCATCGCCAACTCAACTCGAGCCTTCAGACACAACAACAAGACCTTCTCTAGCTAGCTACCACCCCATCG
CAGAGAGCGCCGCCGTAGACGAGGAGATCGGCGATCA-------GCGATCGGCGGACCGGCAATGGCGCCCACCGGGCTT
CTCCTTCTCCTCGGCTGCCTCGCGTCCGCCCTGCTCGCCGGCGCCACCAAAGTGCACCACCACGAGTTCGTCGTACGTGA
TCCTACGTGCTACCCTGCCTT---------TCCTACCAGC--------AATGGCGTTGCTGTTTTTCTTGTCT-------
--CTGACTGTTTGTTTTGTGATGATGAAGGTCCAGGAGACGCCGGTGAAGAGGCTGTGCGAGGAGCACAACATCATCACG
GTGAACGGGCAGTTCCCGGGCCCGACGCTGGAGGTCCGGGAGGGGGACACGCTGGTGGTCAACGTCGTGAACCAGGCGCA
GTACAACGTCACCATCCACTGGCACGGCATCCGGCAGTTCAGGACGGGGTGGGCGGACGGGCCCGAGTTCGTGACGCAGT
GCCCCATCAAGCCCGGCGGCAGCTACAAGTACCGCTTCACCATCGAGGGCCAGGAGGGCACCCTGTGGTGGCACGCCCAC
AGCTCCTGGCTCCGGGCCACCGTCTACGGCGCGCTCATCATCCGGCCCCGGGAGGACAAGCCCTACCCCTTCGAGAAGCC
CGCCCGCGAGGTCCCCATCCTCCTCGGCGAGTGGTGGAACGCCAACCCCGTCGAGGTCATCCGGGAGGCGCAGAGGACCG
GCGGCGCGCCCAACGTCTCCGACGCCTTCACCGTCAACGGCCAGCCCGGCGACCTCTACAACTGCTCCCGCCAAGGTACT
GCTA---GCTAATCATCTCGCCGGCGATCGATGCTGCTAGTCATCGTGCGTGACACGAACGTGTACACTGACGAC---GT
GTGTGTCGTTCCCTTTGGCTCTTGGCAGACACCACCGCCATCTCGGTGAAGCCCGGCGAGACGGCGCTGCTGCGGTTCAT
CAACTCTGCGCTCAACCACGAGCTCTTCGTCTCCATCGCCAGCCACAAGATGACGGTCGTCGGCGTCGACGCCTCCTACA
CCAAGCCGTTCGTCACCTCCGTGCTCATGATCGCGCCGGGCCAGACCACCGACGTGCTCGTCACCATGGACCAGGCGCCC
ACGCGCTACTACATCGCCGCGCGCGGCTACGTCACCACGCAGGGCGTGGCGTTCGACAACACCACCACCACCGCCATCCT
CGAGTACGACTGCGGCTGCACCACCGACTTCGGCCCAACCATCCCGCCGGCGTTCCCGACCCTCCCGGCGTTCAACGACA
CCGGCGCCGCCACGGCCTTCGCCGCGGGCATCAAGAGCCCACGGAAGGTCGAGATCCCCAGCCCC---------GTCGAC
GAGAACCTCTTCTTCACCGTCGGCCTCGGGCTGTTCAACTGCGAGCCGGGGCAGCTGTGCGCCGGGCCGAACAACAACAC
CCGCTTCACGGCCAGCATGAACAACGTCTCCTTCGTCTTCCCCAAGGCCACCTCCCTCCTCCACGCACACTACTACGACA
TGCCG---------GGCGTGTACACCACCGACTTCCCGGCCAACCCGCCGGTGCAGTTCGACTACACGGCGCAGAACGTC
AGCCAAAGCCTGTGGCAGCCGATCCCGGCGACCAAGCTGTACAAGCTCAGGTTCGGCTCCGTGGTGCAGGTCGTGCTGCA
GGACACCAGCATCGTCACGCCGGAGAACCATCCCATCCACCTCCACGGCTACGACTTCTACATCCTCGCCGAGGGCTTCG
GCAACTACGACGCCGAGAAGGACGCCGCGAAGTTCAACCTCGAGAACCCACCGCAGAGGAACACCGTGGCGGTGCCGGTG
AACGGCTGGGCGGTCATCCGGTTCCGCGCCGACAACCCGGGGGTTTGGCTCATGCATTGCCATCTCGACGTGCACATCAC
CTGGGGCCTGGCAATGGCGTTTCTGGTGGAGGACGGGTATGGCGAGCTACAGTCACTGGAGGCGCCTCCAGTTGATCTTC
CAATGTGCTAATGACCGGCAAAGATACAA-CACCAGCAATATTGAAGGCTGCC--CACGTTCTATTCTCAGTTCCTGCCA
TTTGGGGGGTATTTGTGATCTTTATTTTGTACTTCTACTAGGGGTTTTGATTTTCCATCATGGTTTGTAAC-TTCCCCTG
TAAATTTGCGTATTTTCAGTGATTCATCAGCTTATTATTTGAAATGAACTTTTATGTGATAGCAGTAACTACATCAAAGA
TCGAAATGTGCTGATTTGAAAGAGAAAATACATCATTGATTAGCCAGTACTCATATGTGGAGGATTTTTTTTTTGTATGA
AGGACAATTCCAATTAATTGATATATCGACGTGATACTATTGAACTGAGCAAATGC---CCGGCCTCTGCATATTACACA
TGAGCAATGCTACATCTACGTAATTACTTTACGTGTTTTATGTAACAGCAAACGTGGCAAGTGAGGATTGGGGATGGGAA
GAGGAAGGGGCCCACCCCCATTAAAATCAGGGGGGAGAGAGGTTTAGATTAGGAAGTTTACGTAACTTTACGTAGTTGTT
TAAGTAGGTGTAGTATTATTGATTACACATACAACTCGTTCAACACAATAACAAAAAAA----------TTACA--ACAA
CAAAAAAAGGCAACCTAAGATGAGGTAGATTCTATCTGAAGAGTA-TACCGTCATCCATGATGGGAGAAAAACTTTCTGA
CCCTATGCTCCAGCCGGATTGACGTTATCATAA-----------------------------------------------
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>chr3A_418
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-----------------TCCCTATTTACCGACGGTTAATGTCATTTTTTGCGATGACTACCGACCGTTAAATGAGCAATA
ATGTTTCCAGACTCGACGCAGATCAAGTGAGTCGTACAACCGAACTGGATGTGACACACATCAAAAAGCACGGTGGAAAG
TAAAACGCACCTTTCGTGTCATTCTCAAGTAAGTCGCTTGCTCCGTGAAACCACTGCGCATGCGCCAACCGGGGGCAGTC
CAGTGGGTGCACCAAACCATCTGCAGGGTTGACATGACACGCGA-GGCCTCCATCGAAGCAGGTCACTTCGATCGATGCA
GCTAGCATGGCCGCCCGCGAAAAGCTTCCCCACGCAGAGAAATCACAACCTAATCCACCAACCCGCAGCTGCAGGCCAGA
CGACGGCAGGAACACGACGACGATCGCATTTGAACCCTGCTCTTCTGAAGTGCGAATGCTATATATACCGCCCCCTCGAC
GCTGCAAGTCTCATCGCCAACTCAACTCGAGCCTTCAGCCACAAC---AAGACCTTCTCTAGCCAGCCACCACCCCATCG
CAGAGAGCGCCGACGTAGACGACGATCTCCGG--TCA-------GCGATCGGTGGGCCGGCAATGGCGTCCTCCGGGCTC
CTCCTTCTCCTCGGCTGCCTCGCGTCCGCCCTGCTCGCCGGCGCCACCAAAGTGCACCACCACGAGTTCATCGTACGTGA
TCCTATTC----CTACCTCCCTGTCTCTCCTCCTACCAGCAATGCGGTAATGGCGTTGCTGTTTTT---GGGTACGGCTT
TGCTGATTGTTTGTTTTGTGACGATGAAGGTCCAGGAGACGCCGGTGAAGAGGCTGTGCGAGGAGCACAACATCATCACG
GTGAACGGGCAGTTCCCGGGGCCGACGCTGGAGGTCCGGGAGGGGGACACGCTGGTGGTCAACGTCGTGAACCAGGCGCA
GTACAACGTCACCATCCACTGGCACGGCATCCGGCAGTTCAGGACGGGGTGGGCGGACGGGCCCGAGTTCGTGACGCAGT
GCCCCATCAAGCCCGGCGGCAGCTACAAGTACCGCTTCACCATCGAGGGCCAGGAGGGCACCCTGTGGTGGCACGCCCAC
AGCTCCTGGCTCCGGGCCACCGTCTACGGCGCGCTCATCATCCGGCCCCGGGAGGACAAGCCCTACCCCTTCGACAAGCC
ATCGCGGGAGGTGCCCATCCTCCTCGGCGAGTGGTGGAACGCCAACCCCGTCGAGGTCATCCGGGAGGCGCAGCGGACCG
GCGGCGCGCCCAACGTCTCCGACGCCTTCACCGTCAACGGCCAGCCCGGCGACCTCTACAACTGCTCCCGCCAAGGTACT
GCCGAGTGCTGATGATCTCGCCGGCGATGCA----GCTAGCCACCGTGCGTGACACGAACATGTACACTGACGACGATGT
GTGTGTCGTTCGCTTTGGCTCTTGGCAGACACCACCGCGATCTCGGTGAAGCCCGGCGAGACGGCGCTGCTGCGGTTCAT
CAACTCTGCGCTCAACCACGAGCTCTTCGTCTCCATCGCCAGCCACAAGATGACGGTCGTCGGCGTCGACGCCTCCTACA
CCAAGCCGTTCGTCACCTCCGTGCTCATGATCGCGCCGGGCCAGACCACCGACGTGCTCGTCACCATGGACCAGGCGCCC
ACGCGCTACTACATCGCCGCGCGCGGCTACGTCACCACGCAGGGCGTGGCGTTCGACAACACTACCACCACCGCCGTCCT
CGAGTACGACTGCGGCTGCACCACCGACTTCGGCCCATCGATCCCGCCGGCGTTCCCGACCCTCCCGGCCTTCAACGACA
CCGGCGCCGCCAGGGCCTTCGCCGCGGGCATCAAGAGCCCGCGGAAGGTCGAGATCCCAAGCCCC---------GTCGAC
GAGAACCTCTTCTTCACCGTCGGCCTCGGGCTGTTCAACTGCGCGCCGGGGCAGCTGTGCGCCGGGCCGAACAACAACAC
CCGCTTCACGGCCAGCATGAACAACGTCTCCTTCGTCTTCCCCAAGGCCACCTCCCTCCTCCACGCGCACTACTACGACA
TGCCG---------GGCGTGTACACCACCGACTTCCCGGCCAACCCGCCGGTGCAGTTCGACTACACGGCGCAGAACGTC
AGCCAGAGCCTGTGGCAGCCGATCCCGGCGACCAAGCTGTACAAGCTCAGGTTCGGCTCCGTGGTGCAGGTCGTCCTGCA
GGACACCAGCATCGTCACGCCGGAGAACCACCCCATCCACCTCCACGGCTACGACTTCTACATCCTCGCCGAGGGCTTCG
GCAACTACGACGCCGAGAAGGACGCCGCGAAGTTCAACCTCGAGAACCCACCGCAGCGGAACACCGTGGCGGTGCCCGTG
AACGGCTGGGCGGTCATCCGGTTCCGCGCCGACAACCCGGGGGTGTGGCTCATGCATTGCCATCTCGACGTGCACATCAC
CTGGGGCCTGGCAATGGCGTTTCTGGTCGAGGACGGGTATGGCGAGTTACAGTCACTGGAGGCGCCTCCAGTTGATCTTC
CAATGTGCTAATGACCGGCAAAGATACAA-CACCAGCAATATTGAAGGCTGCC--CACGTTCTACTCTCAGTTCCTGCCA
TTTGGGGG-TATTTGTGATCTTTATTTTGTATTTCTACTAGGGGTTTTGATTTTCCATCATGGTTTGTAAC-TTCCCCTG
TAAATTTGCGTATTTTCAGTGATTCATCAGCTTATTATTTGAAATGAACTCTTATGTGATAGCAGTAACTACATCAAAGA
TCGAAATATGCTGATTTGAAAGAGAAAAAACATCATTGATTAGCCAGAACTCATATGTGGAGGATC---TTTTTGTATGA
AGGACAATTTCATTTGATTGATATATCGATGTGATACAATTGAACTGAGCAATGCCCGGCCAGCTTCTGCATATCACACT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ACAACTTGTTCAACACAATAACAAAAAAAAAAGATTATTTTACA--ACAA
CAAAAAAAGCCAACCAAAGATGAGGTAGATTATATCCGAAGAGTATTACCGTCATCCATGATGGGAGAAAAACTTTCTGA
CCCTATGCTCCAGCCAGGTTGACGTTATCATAAAAACGTCGATATCCTCTGGCCTCCATAGGATAGACCCAAAT------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr1A_1222
--------------------------------------------------------------------------------
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--------------------------------------------GTGACGCGGCTGTGCGGCACCAAGAGCATCGCGACG
GTGAACGGGCAGTTCCCGGGGCCGACGCTGTTCGCGCGGGAGGGCGACCACGTGGAGGTCAACGTGGTCAACAACTCGCC
CTACAACATGAGCATCCACTGGCACGGCGTGCGGCAGCTGCTCAGCGGCTGGTACGACGGGCCCTCCTACGTCACGCAGT
GCCCGATCCAGCCGGGCCAGAGCTACGTCTACCGCTTCCAGATCGTCGGGCAGCGGGGCACGCTCTGGTGGCACGCGCAC
ATCTCCTGGCTCCGCGCCACCGTGCACGGGCCCATCGTCATCCTCCCGCCCGCCGGCGTGCCCTACCCGTTCCCGGCGCC
GGAGGCCGAGGTGCCCCTCATGTTCGGCGAGTGGTGGCGGAACGACACCGAGGCCGTCATCGCCCAGGCGCTGCGGACCG
GCGGCGGGCCTAACGTGTCCGACGCCTATACTATGAATGGACTCCCCGGCCCGCTCTACGCCTGCTCGGCCAAGG-----
--------------------------------------------------------------------------------
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------------------------------------------------
>chr1B_1222
--------------------------------------------------------------------------------
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--------------------------------------------GTGACGCGGCTGTGCGGCACCAAGAGCATCGCCACG
GTGAACGGGCAGTTCCCGGGGCCGACGCTGCACGCGCGGGAGGGCGACCACGTGGAGGTCAACGTGGTCAACAACTCCCC
CTACAACATGAGCATCCACTGGCACGGCGTGCGGCAGCTGCTCAGCGGGTGGTACGACGGGCCCTCCTACGTCACGCAGT
GCCCGATCCAGCCGGGCCAGAGCTACGTCTACCGGTTCCAGATCGTCGGGCAGCGGGGCACGCTCTGGTGGCACGCGCAC
ATCTCCTGGCTCCGCGCCACCGTGCACGGGCCCATCGTCATCCTCCCGCCCGCCGGCGTGCCCTACCCGTTCCCGGCGCC
GGAGGCCGAGGTGCCCCTCATGTTCGGCGAGTGGTGGAGGAACGACACCGAGGCGGTCATCGCCCAGGCGCTGCAGACCG
GCGGGGGGCCTAATGTGTCCGACGCCTACACCATGAACGGACTCCCCGGCCCGCTCTACGCCTGCTC-------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr5B_1606
--------------------------------------------------------------------------------
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----------------------------GAGTGGTGGGACATGAACCCCATCGACGTCATCCGCACCGCCACGCGCACCG
GTGCAGCTCCCAACATCTCCGACGCCATCACCGTCAACGGCCAGCCCGGCGACCTCTACAGCTGCTCCTCCCA-------
--------------------------------------------------------------------------------
--------------------------AGACACGGCCGTGTTCCCGGTCAAGTCCGGCGAGACCAACCTGCTGCGGTTCAT
CAACGCGGCGCTCAACACCGAGCTCTTCGTCTCCCTCGCCGGCCACACCATGACCGTCGTGGGCGCTGACGCCTCCTACC
TTAAGCCGTACAACGCCACTGTCATCGTGCTCGGGCCCGGCCAGACCACGGACGTCCTCGTCACTTTCGACCAGCCACCA
GGCCGGTACTACCTCGCCGCCCGCGCCTACGCCAGCGCACAGGGTGTGCCCTTCGACAACACCACCACCACCGCCATCTT
CGACTACAGCGCAGGTGGCACGGCGAGC------------------CCTGCGATGCCGACCCTCCCGGCGTACAATGACA
CGGCCACGG---------TGACCACGTTCACGACGAGCCTGCGCAACCTCCACTCGGTGGGCCTCCCCTCGGTGGTCGAC
GAGGACCTTTTCTTCACCGTCGGCGTCGGCCTCTTCAACTGCTCCAGCGGACAGAACTGCGGCGGCCC---CAACAACAC
ACGGTTCGCGGCGAGCATCAACAACGCCTCCTTCGTGCTCCCCTCCACCGTCTCCATCCTCCAGGCACACTATCAGGGCG
ATGCCGCCGCCACCGGCGTCTTTACCACCGACTTCCCCGCCAACCCGCCGGTGCAGTTCGACTACACAGCGCAGAATGTG
AGCCGCGCGCTCTGGCAGCCCGTGCCAGGCACCAAGGTGTACAAGCTCAAGTACGGCTCCGTGGTGCAGATCGTGCTCCA
GGGCACCAACATCTTCGCCGGGGAGAACCACCCTATCCACACCCATGGCTACGACTTCTTCATCCTCGCTGAGGGCTTCG
GCAACTTCGATGCCGCTACCGACACCGCAAAGTTCAACCTGGACGACCCACCAATGAGGAACACGGTGGGCGTCCCGGTG
AATGGGTGGGCTGTCATCCGGTTCGTCGCCGACAACCCCGGGGTGTGGCTGATGCACTGCCATCTGGATGTGCACATCAC
CTGGGGCCTCGCCATGGCCTTCCTGGTCGAGGATGGAGTAGGAGAGCTGCGGTCCCTGGGGGCACCCCCACCAGACCTGC
CAATTTGCT-----------------------------------------------------------------------
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------------------------------------------------
>chr5D_1834
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--------------------------AGACACGACCGTGTTCCCGGTCAAGTCCGGCGAGACCAACCTGTTGCGCTTCAT
CAACGCCGCGCTCAACACCGAGCTCTTCGTCTCCCTCGCCGGCCACACCATGACCGTCGTGGGCGCCGACGCCTCCTACC
TCAAGCCGTACAACACCACTGTCATCGTGCTCGGGCCCGGCCAGACCACGGACGTCCTCGTCACCTTCGACCAGCCGCCG
GGCCGGTACTACCTCGCCGCCCGCGCCTACGCCAGCGCGCAGGGTGTGCCCTTCGACAACACCACCACCACCGCCATCTT
CGACTACGGCGCCGGTGGCACGGCGAGC------------------CCGGCGATGCCGACCCTCCCAGCGTACAATGACA
CGGCCACGG---------TCACCACGTTCACAACGAGCCTGCGCAACCTCCACTCGGTGGGCCTCCCCTCGGCGGTCGAC
GAGGACCTTTTCTTCACCGTCGGCGTCGGCCTCTTCAACTGCTCCAGCGGACAGAACTGCGGCGGCCC---CAACAACAC
GCGGTTCGCGGCGAGCATCAACAACGCCTCCTTCGTTCTCCCCTCCACCGTCTCCATCCTCCAGGCACACTACCAGGGCG
ATGCCGCCGCCACCGGCGTCTTCACCACCGACTTCCCCGCCAACCCGCCGGTGCAGTTCGACTACACGGCGCAGAATGTG
AGCCGCGCGCTCTGGCAGCCCGTGCCAGGCACCAAGGTGTACAAGCTCAAGTACGGCTCCGTGGTGCAGATCGTGCTCCA
GGGCACCAACATCTTCGCCGGGGAGAACCACCCTATCCACACCCATGGCTACGACTTCTTCATCCTCGCTGAGGGCTTCG
GCAACTTCGATGCCGCTACCGACACCGCAAAGTTCAACCTCGACGACCCACCAATGAGGAACACGGTGGGCGTCCCGCTG
AATGGGTGGGCTGTCATCCGGTTCGTCGCCGACAACCCCGGGGTGTGGCTGATGCACTGCCATCTGGATGTGCACATCAC
CTGGGGCCTCGCCATGGCCTTCCTGGTCGAGGATGGAGTAGGAGAGCTGCAGTCCCTGGGGGCACCCCCACCAGACCTGC
CAATTTGCT-----------------------------------------------------------------------
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>chr5A_2273
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--------------------------------------------------------------------------GTCGAC
GAGGACCTTTTCTTCACCGTCGGCGTCGGCCTCTTCAACTGCTCCAGCGGACAGAACTGCGGCGGCCC---CAACAACAC
GCGGTTCGCTGCGAGCATCAACAACGCCTCCTTTGTGCTCCCCTCCACCGTCTCCATCCTCCAGGCACACTACCAGGGCG
ATGCCGCCGCCACCGGCGTCTTCACCACCGACTTCCCCGCCAACCCGCCGGTGCAGTTCGACTACACGGCGCAGAATGTG
AGCCGCGCGCTCTGGCAGCCCGTGCCAGGCACCAAGGTGTACAAGCTCAAGTACGGCTCCGTGGTGCAGATCGTGCTCCA
GGGCACCAACATCTTCGCCGGGGAGAACCACCCTATCCACACCCATGGCTACGACTTCTTCATCCTCGCTGAGGGCTTCG
GGAACTTCGATGCCGCTACCGACACCGCAAAGTTCAACCTCGACGACCCGCCAATGAGGAACACGGTGGGCGTCCCGGTG
AATGGGTGGGCTGTCATCCGGTTCGTCGCCGATAACCCCGGGGTGTGGCTGATGCACTGCCATCTGGATGTGCACATCAC
CTGGGGCCTCGCCATGGCCTTCCTGGTCGAGGATGGGGTAGGAGAGCTGCAGTCCCTTGGGGCACCCCCACCAGACCTGC
CAATTTGCT-----------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS-------S----------------------SSS------------------------------
------------S----------------------S-------------------------S------------------
-----------------------------------------------------------------------------S--
--------------------------------------------S---S------------------------SS-----
---------------------------------------------------------S----------------------
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----S------------------------------------------S---------------------S---------S
------------S------------------------SSSSSSS-----------------------------------S
------S-----------------------------------------------------------------------S-
--------SSSS-------------------S---S--SSSSS-SSSSSSSSS-SSS--SSSS-----S-----------
--------------------S-------------S---------------------------------------------
--------------------------------------------------------S-----------------------
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-------------------------------------------------------------------------------S
-----------S---------S-------------------------------------------S--------------
-----------------------------------S--------------------S-----------------------
------------------S-----------------------------------------------------S-------
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------------------------------------S-------------------------------------------
-------------------------------------------S-----------S------------------------
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------------------------------S-------------------------------------------------
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-----------------------------S------SS---------------SS-------------------------
---------------------------------------------------------S----S--------S--------
----------------------------------------S-----------S--------S-----------S------
------------------------------------S---------SS----------------S---------------
-------------------------------------------------SS----S------------------------
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-------------------------------------------SSS-SS-SS----S------------S--SSSS----
-------S------------------------------------------S-----------------------------
---------S---S--------------------SSS--S---S------S-S--S-SS----------S--SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_417
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-----------------------------------------------------------------------------CTC
GGGCTAGAAACTCCACG---------------------------------------------------------------
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>reverse_1939
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------------------TGAGCTCTTCGTCTCCATCG------------------------------------------
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>forward_1772
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------------------------------------------------------------------------GCCAAGGT
ACCGCTAGCTAC--------------------------------------------------------------------
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>reverse_3761
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CATCGCGTACTGAAAGCACG------------------------------------------------------------
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------------------------------------------------
