>input_sequence_40984
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--------------------ATGCAAGCTTCTTCCAGATCCAGCTCCATGGAGAGGACCAGCCAGTGGTACGTTTCCATG
TCTTTGC-CAGTGCGAATTGCTTGCCCGTCCATGTCTCTCGTATGCTCATGTCTTGCCTCTTTGAATTGATT-GAGCAGG
GTGTCGTCGCAGGACGTACCAACGGACCTCGTCGTCCGGGTCGCCGGCGCCGCCTTCCCTCTTCATAAGGTTAGTCGTCT
TCCACCTCCCGGTCGATCTCTCCAACTCCTCCTCACGTGTGTACAAGAAAAAAGTGTCGCCGGTGATCATGGTCTGACGT
GGGCACAACTAAATGCTTCCGGTGCAGGCGGTGATGGTGCCCAAGTGTGGCTACATCCGCAAGGCCGTCGCCATGGCCAC
GCGCCCCGACCCCGCGTCGACCGTCGAGATCGAGCTCGACGGCCTGCCGGGCGGCGCCGACGCCTTCGAGAAGGCCGCGC
GTTACTGCTACGGCGCCAACTTCGAGATATCCGCTCGCAACGCCGCCGCCCTCCTCTGCGCCGCCGCGTTCCTCGACATG
CAGCCGGCCGACGGCGGCCTCGCGCGCCGCGTGGAGGAGTTCCTCGCGCAGGCGGGTCTCCGGACGCTGCCCAACGCGAT
CGCGGTGCTGCGGTCCTGTGAGGGCCTGCTCCTCACGGCCACCGAGGAGCTCGGCGTCGCCCGGCGAGCGGCCGACGCCG
TGGCCCTGCGGGTCTGCAACGAGGTGCTTTTCCCGACGCGGTCGCCGCCGGAGTGGTGGGCGTCGGAGCTCGCAGCTCTC
TCGCCAGCGTCGTTCCACAGGGTCTTTACGGCGCTGCGCTGCCGACGCGCCGGTCCTGAGGTGCTCGTCGCCGCGGCCAC
CGCCTACGCCGAGCTCCTGCTGGCCGACGGCAAAGCTTCCGACCACCGCGCGCTCCTCGAGTCCGTTGTCGCCGTGCTCC
CTTCAGCGGACGACGCGCCCCTTCCCGCAGCGTTCCTCTGCCGCCTCCTGCACGACGCCGTCACCACCGAGGCCTCGGCC
AAGACGTGCCGCGACCTGGAGCTCCGCCTCGCGGCCGTGCTCGACCAGGCTACCGCGGGTGACCTGCTCGCCTTGGCGCT
CGATGGCGCTGGTGAGTGCGTCATTAACACCGAATCGCTCCGGCGTGTCATCGCCGCATTTGTGGAGCGCGAGTCCGGTG
CCGGGCGGAACAGGAGGGCGTCGCTGTCCGGAGCGGCGGCGCTGGGCGCAGGGGCGCTGCAGAAGGTGGCCAAGATGGTG
GACGAAGTGGCGGCGGAGATCGCGACGGACGAGTCCCTACCGATCTCCAAGTTCGTGGGCGTCGCCGGCGCTGTGCCCAA
GGACGCCCGCGCCACCCACGACTGCCTCTACCGCGCCGTGGACATCTACCTCAAGGCGCATCCGGAGCTGGACGAGATCG
AGCGGGAGAAGGTGTGCAGCGTCATGGACACCCTGAAGCTCTCCTACACGGCGCGCCTCCACGCCTCCCAGAACAAGCGC
CTGCCGCTCCAGGCCGTGCTCAGCGCACTCTACTACGACCAGCTCAAGCTCCGCAGCGCCGGCGTCGGCCACGACGATGA
GGATAACGATGCGCGGTCGGAGGCCGGGTCGGCGCGCATGCAGGCAAAGGCGGACGCGGCGCTGGCGCGGGAGAACGAGG
CACTGCGGTCGGAGCTGGCCCGGATGCGGGCGCACATGTCGTCCGGCGTGCAGCAGAGCAAGGGGAGCGGCTCGAGGACG
GCGGCGACGGCGACGGTGGCAGGGAAGAAAGCGAGCTTCTTCGGGTCGATGTCGCGCACACTGAGCCGGCTGAACCCGTT
CAGGGCCGGCGGCGGGTGGTCCAAGGACACGTCGAGCATCCGAGACAGTAGGGGCGGCGCCATGAATGTGGTGAAGCCCA
GGAGGAGGAGGTCCTCCATAAGCTAA------------------------------------------------------
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---
>chr4B_1_TraesCS4B01G122300
TTACTTTTTGTAGCTCATTTAAATGAAAA-----ATATATCACAAACAATGTTATTAACAGTGTGATTGTAAGGCACTAG
CTAGAAACCAGTCAACTGAAAATGCAATATAGGCCAATCGACTGGTTTCAGCCATCCGATGGAAAACAGACGTCCAGATG
AGCGTCTTCGACCTCGAGCCATCGTCTTCTTTCTTCGAACCACCGAGCCACCACCA-CCCTCGGCTGGCGGTGCTCCCGA
GCCAGCCTCGCCACCACCACCCTCGACTGGCGGTGCTCCCGAGCCAGCCTCGCCACCCCGACCTCCCGCCAATCGCCGCC
CACCGCCGTGCTGCCGCCCGCC-GCCAACCATCCCTCTAAGCCCGGCCATGAAACG-TTTCTCTGGCAAACCTGCACCCC
TCTAACACACAGAGTCTGCCACCT-----------------TAAAGATAGATAACGTGGGAGCTTCTCTGGCGAGCTTCT
TCCTTCTTTCCGACAGATT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CTTCGTTCGATCAAAAATCGACTGACCTAAATTCCAAATTCATGCAACTTA
CATATAGA------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TATTGTGTGATTGTAAATGTAAAGCCAGTATTTAACCACGTGATGTAGATTACACCCACAAATGTGCTGATCAA
ATAACCAGTGTAAAGTACTACGGAACATGCATAGGTTGCCATCAAACATGACGGAGGCCAGCAACTTGTCCGGATTGTCG
CCGGGACACCTCCTTCCACGGAACAGAGCCACAGCGAACACTAGCCACTAGTCACATGCATAC-----------------
---------TCCAATCCAATCAAATTCCCGAGCCCCGAACACATGCACGTACCTATCATGGACACGCTGACCAAACACCA
GCCATGCAAAAATCAAGCCCTCCGCCATCACAAGAAAATACTTGAACGGAGAATTTTAATGGAATCTCTATATATCCCGT
GGTGATCTGGATGCTGCCTCCCGGGGCAGAGCTCGA-TTGCACGAACGCACGCCTTCGTCTAGCTCTAGACACGTACGGC
TCTCCGGTGCCTTGCTGTCCATGCAAGCTTCTTCCAGATCCAGCTCCATGGAGAGGACCAGCCAGTGGTACGTTTCCATG
TCTTTGC-CAGTGCGAATTGCTTGCCCGTCCATGTCTCTCGTATGCTCATGTCTTGCCTCTTTGAATTGATT-GAGCAGG
GTGTCGTCGCAGGACGTACCAACGGACCTCGTCGTCCGGGTCGCCGGCGCCGCCTTCCCTCTTCATAAGGTTAGTCGTCT
TCCACCTCCCGGTCGATCTCTCCAACTCCTCCTCACGTGTGTACAAGAAAAAAGTGTCGCCGGTGATCATGGTCTGACGT
GGGCACAACTAAATGCTTCCGGTGCAGGCGGTGATGGTGCCCAAGTGTGGCTACATCCGCAAGGCCGTCGCCATGGCCAC
GCGCCCCGACCCCGCGTCGACCGTCGAGATCGAGCTCGACGGCCTGCCGGGCGGCGCCGACGCCTTCGAGAAGGCCGCGC
GTTACTGCTACGGCGCCAACTTCGAGATATCCGCTCGCAACGCCGCCGCCCTCCTCTGCGCCGCCGCGTTCCTCGACATG
CAGCCGGCCGACGGCGGCCTCGCGCGCCGCGTGGAGGAGTTCCTCGCGCAGGCGGGTCTCCGGACGCTGCCCAACGCGAT
CGCGGTGCTGCGGTCCTGTGAGGGCCTGCTCCTCACGGCCACCGAGGAGCTCGGCGTCGCCCGGCGAGCGGCCGACGCCG
TGGCCCTGCGGGTCTGCAACGAGGTGCTTTTCCCGACGCGGTCGCCGCCGGAGTGGTGGGCGTCGGAGCTCGCAGCTCTC
TCGCCAGCGTCGTTCCACAGGGTCTTTACGGCGCTGCGCTGCCGACGCGCCGGTCCTGAGGTGCTCGTCGCCGCGGCCAC
CGCCTACGCCGAGCTCCTGCTGGCCGACGGCAAAGCTTCCGACCACCGCGCGCTCCTCGAGTCCGTTGTCGCCGTGCTCC
CTTCAGCGGACGACGCGCCCCTTCCCGCAGCGTTCCTCTGCCGCCTCCTGCACGACGCCGTCACCACCGAGGCCTCGGCC
AAGACGTGCCGCGACCTGGAGCTCCGCCTCGCGGCCGTGCTCGACCAGGCTACCGCGGGTGACCTGCTCGCCTTGGCGCT
CGATGGCGCTGGTGAGTGCGTCATTAACACCGAATCGCTCCGGCGTGTCATCGCCGCATTTGTGGAGCGCGAGTCCGGTG
CCGGGCGGAACAGGAGGGCGTCGCTGTCCGGAGCGGCGGCGCTGGGCGCAGGGGCGCTGCAGAAGGTGGCCAAGATGGTG
GACGAAGTGGCGGCGGAGATCGCGACGGACGAGTCCCTACCGATCTCCAAGTTCGTGGGCGTCGCCGGCGCTGTGCCCAA
GGACGCCCGCGCCACCCACGACTGCCTCTACCGCGCCGTGGACATCTACCTCAAGGCGCATCCGGAGCTGGACGAGATCG
AGCGGGAGAAGGTGTGCAGCGTCATGGACACCCTGAAGCTCTCCTACACGGCGCGCCTCCACGCCTCCCAGAACAAGCGC
CTGCCGCTCCAGGCCGTGCTCAGCGCACTCTACTACGACCAGCTCAAGCTCCGCAGCGCCGGCGTCGGCCACGACGATGA
GGATAACGATGCGCGGTCGGAGGCCGGGTCGGCGCGCATGCAGGCAAAGGCGGACGCGGCGCTGGCGCGGGAGAACGAGG
CACTGCGGTCGGAGCTGGCCCGGATGCGGGCGCACATGTCGTCCGGCGTGCAGCAGAGCAAGGGGAGCGGCTCGAGGACG
GCGGCGACGGCGACGGTGGCAGGGAAGAAAGCGAGCTTCTTCGGGTCGATGTCGCGCACACTGAGCCGGCTGAACCCGTT
CAGGGCCGGCGGCGGGTGGTCCAAGGACACGTCGAGCATCCGAGACAGTAGGGGCGGCGCCATGAATGTGGTGAAGCCCA
GGAGGAGGAGGTCCTCCATAAGCTAAGACTCCATAGAAATCATCCATGATGCGATAGGTGCATGTAATTCGGTCTCATTT
CATTCGTATGATCACTGGTGTGTACTGTGCGTGTAGAGGAAGATCATGATCGTGGTTGCTAGTTCTCATGATTCTTCCCT
CTTT--CAGTTAATTTGTGTCATCTATTGTACTG-----------------------TGTATGTTGGGCATTGTATATTA
GA------AAGAGGAAGTCTTCAATTCAACTATACTTCCTCCGTGGATTTCACAT-------------------------
-TGAACTTTCAAAAAAGGTAAAATGGTTCAGATCTTGTAACTGAAAAGGGTAGATTCAGTTCGGTTGTGTTTCCTCCGGA
AAGAAATATAAGAGCGTGTGGAGAGT------------------------------------------------------
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------------------------------------------------------GTACGTGATAATTTTTTTAATGATTT
GGCTTGAATAAAAGCTGCTTCTTCACCCCCTAGCTAAGAGTCATTGATGGCCAT--------------------------
----TCATTGTGGTTTAAAGAGATCGATATA------------------------------TAGTACTCCCTCGTGTCCT
TTTTAGTCTGCATATAAGTTTTGGAATGTTTGACTTGGCACAAATCTTATACACGAAGTAAAAAGAACTGGAGAGAGTAT
GAAGTGAAGATAAATGTTGATCAACATGAAACTCAAGAATTATACACTAGATGGTCAACATACAAGCATATATGTTGTAT
CGCATAGAAATTAATTGTGAATCATGCAATATGAACTAGTCCATATACAATGTGTTTGGTATAA----------------
--------GTATATGTGGACATATACTATGTGTTTCGTAAATTATATGTATATGTATATGTGGACATATACTATGTGTTT
GGTATATGT------ATATGTATATGTAGGTTAGGTGATGGGCCGGCCGAGTAACGGGTTTTCTCGGTTGTGCATTCGTT
CTTCTGTTGATCGC-TGATGTGTTTGTTCGTTCTTTCATTTCTTTTGTTTTTTTCCTCTTCGGTTTTATATTTTTTTCAC
CTGCTTCTTATGTTTTTTCTCTACATG-TACTTTGGTTTTCTTTGTTTTTCTCCATATATTTTCATTGGTTTTTCCTTTT
TCT
>chr4D_1
TTACTTTTTGTAGCTCACTTATTAAATGAAAGATATATATCATAAACAATGTCATTAACAATGTGATTGGAAGGGACTAG
CTAGAAACTAGTCGAGTGAAAATGCGATTTGGGTCAATCGACCGGTTTCAGCCATCCGATGGAAAACATACGTCTAGATG
AGCGTCTTCGACCTCGAGACATCGTCTTCTTTCTTCGAACCACCGAGCCACCACTA-CCCTCGGTCGGCGACGCTTCGGA
GCCAACCTCGCCACCTCAC------------------------------------------CCTTCCCCCAACCGCCGCC
CACCGCCGTGCTACCGCCC-CC-ACCATCCATCTCTCTAACCCCAGCCATGAAACATTTTCTCCGGCAAACTTGCACCAC
CCTAACACCCCTGAGATAGATAATGGGGGTGTTTGCCACCCTAAAGATAGATAATGGGAGAGCTTCTCCGGCGAGCTTCT
TCCGATTGT--------TT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CTTCATTCAATCAAAAATCGAATGGCCCAAATTCCAAATTTAGGCGACTTA
GGGCCTATTTGGCAACGCCCAA-CTCTCAACTCCCAAAACTTCTCGTGAGAAGCCACCCCGAACGCCTGAGACTCATGAA
GCTAGATTCTAGAAGCGATGTTGAGAAGCTGAATCTGTGGAGTTTGGGAAGCTTGGGGGACTTTAGAACACACCTTTACA
TATAACTTTTGTGTGATTGTAAATGTAAAGCCAGTATTTAACCACGTGATGTAGATTACACCCACAAATGTGCTGATCAA
ATAACCAGTGTAAAGTACTACGGAACATGCATAGGTTGCCATCAAACACGACGGAGGCCAGCAACTTGTCCGGATTGTCG
CCGGGCCG-CTCCTTCCACGGAACAGAGCCACATCAAACACTGGCCACTAGTGGCATGCTCGCATGCAATGCCGAGAACC
AAGACGCCATCCAATCCAATCAAATTCCCGAACCCCGAACACATGCACGTACCTATCATGGACACGCTGACCAAACACCA
GCCATGCAAAAATGGAGCCCTCCGCCATCACAAGAAAATACTTGGACAGAGAATTTTAATGGAATCTCTATATATCCCGT
GGTGATCGGAATGCTGCCTCCCGGGGCAGAGCTCGAGTTGCACGAACGCACGCCTTCTTCTAGCTCTAGACACGCGCGCC
TCACCGGTGCTTTGCTGTCCATGCAAGCTTCTTCCAGATCCAGCTCCATGGAGAGGACCAGCCAGTGGTACGTGACCATG
TCTTTGCACAGTGAGAATTGCTTGCTCGTCCATGTCACTCGTATGCTCATGTCTCGTTTCTTTGGATTGGTTCGAGCAGG
TTGTCGTCGCAGGACGTACAAACGGACCTCGTCGTCCGGGTCGCCGGCGCCGCCTTCCCTCTTCATAAGGTTAGTCGTCT
TCCACCTGCCGGTCGATCTCTCCAGCTCCTCGTCGCGTGTGTACAAGAAAAAAGTGTCGCCGGTGATCATGGTCTGACGT
GGACACAACAAAATGCTTCCCGTGCAGGCGGTGATGGTGCCCAAGTGTGGCTACATCCGCAAGGCCGTCGCCGTGGCCAC
GCGCCCCGACCCCGCGGCGACCGTCGAGATCGAGCTCGACGGCCTACCGGGCGGCGCCGACGCCTTCGAGAAGGCCGCGC
GTTACTGCTACGGCGCCAACTTCGAGATATCCGCACGCAACGCTGCTGCGCTCCTCTGCGCCGCCGCGTTCCTCGACATG
CAGCCGGCCGACGGCGGCCTCGCGCGCCGCGTGGAGGAGTTCCTCGCGCAGGCGGGTCTCCGGACGCTGCCCAACGCGAT
CGCCGTGCTGCGGTCCTGTGAGGGCCCGCTCCTCACGGCCGCCGAGGAGCTCGGTGTCGCCCGGCGCGCGGCCGACGCCG
TGGCCCTGCGGATCTGCAACGAGGTGCTTTTCCCGACGCGGTCGCCGCCGGAGTGGTGGGCGTCGGAGCTCGCAGCTCTC
TCGCCAGTGTCGTTCCACAGGGTCTTTACGGCGCTGCGCTGCCGACGCGCCGGTCCTGAGGTGCTCGTCGCCGCGGCCAC
CGCCTACGCGGAACTCCTACTGGCCGACGGCAAAGCTTCCGACCACCGCGCCCTCCTCGAGTCTGTTGTCGCCGTGCTCC
CTTCAGCGGACGACGCGCCCCTTCCCGCAGCGTTCCTCTGCCGCCTCCTGCACGACGCCGTCACCACCGAGGCCTCGGCC
AAGACGTGCCGCGACCTGGAGCTCCGCCTCGCGGCCGTGCTCGACCAGGCCACCGCGGGCGACCTGCTCGCCTTCGCGTT
CGATGGCGCTGGTGAGCGCGTCATTAACACCGAATCGCTCCGGCGTGTCATCGCCGCGTTTGTGGAGCGCGAGTCCGGCG
CCGGGCGGAACAGGAGGGCGTCGCTGTCCGGAGCGGCGGCGCTGGGCGCAGGGGCGCTGCAGAAGGTGGCCAAGATGGTG
GACGAAGTGGCGGCGGAGATCGCGACGGACGAGTCCCTACCGATATCCAAGTTCGTGGGCGTCGCCGGCGCTGTGCCCAA
GGACGCCCGCGCCACCCACGACTGCCTCTACCGCGCCGTGGACATCTACCTCAAGGCGCACCCGGAGCTGGACGAGATCG
AGCGGGAGAAGGTGTGCAGCGTCATGGACACCCTGAAGCTCTCCTACACGGCGCGCCTCCACGCCTCCCAGAACAAGCGC
CTGCCGCTCCAGGCCGTGCTCAGCGCACTCTACTACGACCAGCTGAAGCTCCGCAGCGCCGGCGTCGGCCACGACGATGA
GGATAACGATGCGCGGTCGGAGGCCGGGTCGGCGCGCATGCAGGCAAAGGCGGACGCGGCGCTGGCGCGGGAGAACGAGG
CACTGCGGTCGGAGCTGGCCCGGATGCGGGCGCACATGTCGTCCGGCATGCAGCAGAGCAAGGGGAGCGGCTCGAGGACA
GCGGCGACGGCGGCGGTGGCGGGGAAGAAAGCGAGCTTCTTCGGGTCGATGTCGCGCACGCTGAGCCGGCTGAACCCGTT
CAGGGCCGGCGGCGGGTGGTCCAAGGACACGTCGAGCATCCGTGAGAGTAGGGGCGGCGCCATGAATGTGGTCAAGCCCA
AGAGGAGGAGGTCCTCCATAAGCTAAGACTCAATATATATCATGCATGATGCGATAGGTGCATGTAATTCGGTCTCATTT
CATTCGTATGATCGCTGGTGTGTACTGTGCGTGTAGAGGAAGATCATGATCGTGGTTGCTACTTCTCATGATTCTTCCCT
TTTT--CAGTTAGTTTGTGCCATCTATTGTACTACTAATCCACCATGTACTGTATGATGTATGTTGGGCATTGTATATTA
GA------AAGA---AGTGTTCAATTCAACTATACTTCCTCCGTGGATTGGCAATTTGGGACCAGCTCTCTGGATTTAAC
ATGAACTTTCAAAAAAGGTAAAATGGTTCAGATCTTGTAGCTGAAAGGGGAAGATTCAGTTCGATTGTGCTTCCTTTGTA
AAGAAATATAAGAGCGTTTGGAGGGAAATACACTTTGGTTCCTGGTTGTATATACACCCTATATGAGATTTTTTTAAATA
ATTTTACAAAAAGTCAAAATAGTTCAAAAGTATTTTTAGATTAAACTCGACATTGTTTTGCACTAGTATATAAATTTTCA
CGAAAAAATAACATTGACTTCAGTGCAAAAAAGACAAATTGTATTTGCTATTATAGGTCACTATTCACACTATTTTGACC
AAAATTTGTCTTTTTGAACAGAAGTCAAAGGGTTATTTTATTTTTGTGAAATTTTTCTCACAAGTATAATAGAAGGTCGA
GTTTATTTCAAAAATATTTGCAGATTTTTTTGACTTTTTGTTGAATTGCTAATTTATTTTCCCATATAGGGTGTATATAC
ACTCAGGAACCAAACACTCCCGTCCAGCGTTTGGATCACTACTTTATAGAGGAAGTACGTGGTAAATTTTCTAATGATTT
AGCTTGAATAACAGTT----------------GCTAAGAGTCATTGATGGCCATCTCTTAGACCAATAAAGTGAAGTTAA
AAGTTCATTGTGGTTTCAAGAGATCGATATACAGTATCCGCAAAAAAAAGATATCAATATATAGTACTCTCTCCTGTCCT
TTTTAGTCTGCATATAAGTTTTGAAAAGTTTGACTTGGCAAAAATCTTATAAGCTGAGTAAAAAGGACGAAAGAGAGTAT
GAAGTGAAGATAAATGTTGATCAACATGAAACTCAAGAACTATACACTAGATGGTCAACATACAAGCGTATATGTTGTAT
CACATAGAAATTAATTGTGAATCACACAATATGAACTAATCCATATACAACGTGTTTGGTATATGTATATGTATATGTAT
ATGTATATGTATATGTGGACATATACTACGTGTTTCGTAAAT-----GTATATGTACATGTGGACATATACTATGTGTTT
GGTATATGTATATGGATATGTATATGTGGGTTACGTCATGGGCCGGCCGAGTAACGGGTTTTCTTGGTTGTCCGTTCGTT
CGTTCTATTGATCGTTGATGTGTTTGTTCGCTCTTTCATTTCTTTTGTTTTTTCTTTGGCTTCTTC------TTTTTAAC
CAGTTTCCTATGTTTTTTCTCCGCGTTATACTTTGGTTTTGTTTTTTTTTC---ATATATTTTCATCAGTTTTTCTTTTT
T--
>chr4A_3
--ACTTTTTGTAGCTCGCTTAAATGAAAA-----ATATATATCATAACATTAC--TAACAATGTGATTGTAAGGGACTAG
TTAGAAACCAGTCGACTGAAAATGTGATTTGGGTCAGCTGACTAGTTTCAGCCATCCGATGAAAAACAGACGTATAGATG
AGTGTCTTCGACCTCAAGCCATCGTCTTCTTTCTTCGAACCACCGAGCCGCCACCATCCCTCAGTCGGCGATGCTCCCGA
GCCAGCCTCGCCACCCCGCCCTTCC-----------------------------------------------------CC
CACCGCCGTGCTGCCGCCC-CCCACCAGCCATCCCTCTAACCCCGGCCATGAAACATTTTCTCCGGCAAACCTGCACCGC
CCTAACACCCCTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCACTCAATAAAAAATCGAATGGCCCAAATTCCAAATGTAGGCGACTTA
GGGCCTATTCGGCAATGCCCCAGCTCTCAACTCCCAAAACTTCTCGTGAGAAGCCACCCCGAAGGCCCGATACTCGTGAA
GCTAGATTCTAGAAGCAACGTTGAGAAGCTGAATCTTTGAAGTTTGGGAAGCTTGGAGGACTTCAGAACACGCTTTTACA
AATAACTATTGTGTGATTGTAAATGTAAAGCCAGTATTTAACCACGTGATGTAGATTACACCCACAAATGTGTTGATCAA
ATAACCAGTGTAAAGTACTACGGAACATGCATAGGTTGCCATCAAACATGACGGAGGGCAGCAACTTGTCCGGATTGTCT
CCGGGCCG-CTCCTTCCAGGGAACAGAGCCACAGCGAACACTGGCCACAAGTCGCATGCATGCCG---ATGCCGAGAACC
AAGACGCCATCCAATCCAATCAAATTCCCGAACCCCAAACACATGCACGTACCTGTCATGGACACGCTGACCTAACACCA
GCCATGCAAAAATGGAGCCCTCCGCCATCACAAGAAAATACTTGGACGGAGAATTTATTTGGAATCTCTATATATCCCGT
GGTGTTCTGGATGCTGCCTCCCGGGGCAGAGCTCGA-TTGCACGAACGCACGCCTTCGTCTAGCTCTAGACACGTACGGC
TCTCCGGTGCCTTGCTGTCCATGCAAGCTTCTTCCAGATCCAGCTCCATGGAGAGGACCAGCCAGTGGTACGTGACCATG
TCTTTGCACAGTGCGAATTGCTTGCTCGTCCATGTCACTCGTACGCTCATGTCTCGTTTCTTTGAATTGGTTCGAGCAGG
GTTTCGTCGCAGGACGTGCCAACGGACCTCATCGTCCGGGTCGCCGGCGCCGCCTTCCCTCTACATAAGGTTAGTCGTCT
TCCACCTCCCGGTCGATCTCTCCAACTCCTCCTCACGTGTGTACAAGAAAAAAGTGTCGCCGGTGATCATGGTCTGACGT
GGGCACAACTAAATGCTTCCCGTGCAGGCGGTGATGGTGCCCAAGTGTGGCTACATCCGCAAGGCCGTCGCCATGGCCAC
GCGCCCCGACCCCGCGGCGACCGTCGAGATCGAGCTCGACGGCCTGCCGGGCGGCGCCGACGCCTTCGAGAAGGCCACGC
GCTACTGCTACGGCGCCAACTTCGAGATATCCGCTCGCAACGCCGCCCCCCTCCTCTGCGCCGCCGCGTTCCTCGACATG
CAGCCGGCCGACGGCGGCCTCGCGCGCCGCGTTGAGGAGTTCCTCGCGCAGGCGGGTCTCCGGACGCTGCTCAACGCGAT
CGCCGTGCTGCGGTCCTGTGAGGGCCCGCTCCTCGTGGCCGCCGAGGAGCTCGGCGTCGCCCGGCGCGCGGCCGACGCCG
TGGCCCTGCGGATCTGCAACGAGGTGCTTTTCCCGACGCGGTCGCCGCCGGAGTGGTGGGCGTCGGAGCTCGCAGCTCTC
TCGCCAGCGTCGTTCCACAGGGTCTTTGCGGCGCTGCGCTGCCGACGCGCCGGTCCTGAGGTGCTCGTCGCCGCGGCCAC
CGCCTACGCGGAGCTCCTGCTGGCCGACGGCAAAGCTTCCGACCACCGCGCCCTCCTCGAGTCTGTTGTCGCCGTGCTCC
CTTCAGCGAACGACGCGCCCCTTCCCGCAGCGTTCCTCTGCCGCCTCCTGCACGACGCCGTCACCTCCGAGGCCTCCGCC
AAGACGTGCCGCGACCTGGAGCTCCGCCTCGCGGCCGTGCTCGACCAGGCCACAGCGGGCGACCTGCTCGCCTTGGCACT
CGATGGCGCTGGTGAGCGCGTCATTAACACCGAATCGCTCCGGCGTGTGGTCGCCGCGTTTGTGGAGCGCGAGTCCGGTG
CCGGACGGAACAGGAGGGCGTCGCTGTCCGGAGCGGCGGCGCTGGGCGCAGGGGCGCTGCAGAAGGTGGCCAAGATGGTG
GACGAGGTGGCGGCGGAGATCGCGACGGACGAGTCCCTGCCGATCTCCAAGTTCGTGGGCGTCGCCGGCGCTGTGCCCAA
GGACGCCCGCGCCACCCACGACTGCCTCTACCGCGCCGTGGACATCTACCTCAAGGCGCACCCGAAGCTGGACGAGATCG
AGCGGGAGAAGGTGTGCAGCGTCATGGACACCCTCAAGCTCTCCTACACGGCGCGCATCCACGCGTCCCAGAACAAGCGC
CTGCCGCTCCAGGCCGTGCTCAGCGCACTCTACTACGACCAGCTCAAGCTCCGCAGCGCCGGCGTCGGCCACGACGACGA
GGATAGCGATGCGCGGTCGGAGGCCGGGTCGGCGCGCATGCAGGCCAAGGCGGACGCGGCGCTGGCGCGGGAGAACGAGG
CACTGCGGTCGGAGCTGGCCCGGATGCGGGCGCACATGTCGTCCGGCGTGCAGCAGAGCAAGGGGAGCGGCTCGAGGACG
GCGGCGACGGCGACAGTGCCGGGGAAGAAAGCGAGCTTCTTCGGGTCGATGTCACGCACGCTGAGCCGGCTGAACCCGTT
CAGGGCCGGCGGCGGGTGGTCCAAGGACACGTCGAGCATCCGTGACAGTAGGGGCGGCGCCATGAATGTGGTCAAGCCCA
AGCGGAGGAGGTCCTCCATAAGCTAAGACTCAATATATATCATCCATGATGAGATAGGTGCATGTAATTCGGTCTCATTT
CATTCGTATGATCACTGGTGTGTACTGTGCGTGTAGAGGAAGATCATGATCGT-------AGTTCTCATGATTCTTCCCT
TTTTTTCAGTTAGTGTGTGTCATCTATTGTACTACTAATCTACTATGTACTGTATGATGTATGTTGGGCATTGTATATTA
GTAGAAAGAAGA---AGTGTTCAATTCAACTATACTTCCTCCGTGGATTGGCAATTTGGGACCAGCTCTCTGGATTTAAC
ATGAACTTTCAAAAGGGGTAAAATGGTTCAGATCTTGTAACTGAAAAGGGAAGATTCAGTTCGGTTGT------------
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---
>SNPs
-----------------S----------------------------------S-------S-------------S-----
-------------S-----------S--S-S--S----------------------------------------S-----
----------------------------------------------------------------SS----S---------
---------------S-SS--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S----S-------
-------------------S---S---S------------S--------------S-------S--------------S-
S-------S-SS-SSS-SSSSSS-------------------------------S-S-S---------S-----------
---SSS-S-SSSSSSSS---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S---S------------S--S--S------------S-S--S-----
SSSSSSSS------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-SS---------------------------------S----------S-------S------------------
-------------------------------S------------------------------------------------
-------------SS-----------------------------S-----------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------SS-----
-------------------------S----------S-----------------S-SS-----------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------S-------------S-------------------------S-------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S-----------------------------------------S-----------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------S--------S--------------------
----------------S----------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S--------------------------------------S--------------------
------------------------------------------S-----------------------------S-------
S------------------------------S---S-S------------------------------------------
--------------------------------------------------------------------------------
S-----------S--------------------S----------------------------------------------
------------SSS---S------------------------------SSSS---------------------------
--------------------------------------------------S------------------S-----SS-S-
-----------------S-----S-S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S---S----S---------
S----------S--S-SSSSSSSSSSSSSSSS------------------------------------------------
----------------S----------------------------------------------------S---S------
-----------------------S--S-------------S----------SS-SS---------S--SSS---------
---------------------------------------S---------------------------S------------
-S----------------------SS------------S-----------S------------S----------------
----------------------------S-------------SSSSS---------S-----------------------
---------------------------S-----S--S---------------------------S------S-S------
-S-SSSS-SSSSSS----------------S----------------------SSS-SSSSSS--SSSSSSS-----S--
-S-S---S-------------SS-S-S-------------S---S------SSS------------SS-------S----
-SS
>forward_1243
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-----------------------CAGAGCCACAGCGAACACTA-------------------------------------
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---
>reverse_2252
--------------------------------------------------------------------------------
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-----------GTCTGCAACGAGGTGCTTTT-------------------------------------------------
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---
>forward_1861
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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GGGCACAACTAAATGCTTCCG-----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---
>reverse_4335
--------------------------------------------------------------------------------
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--------------CTGCTTCTTCACCCCCTAGC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
