>input_sequence_40969
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--------------------------------------------ATGGAGGCGTCGGCGTACAAGTTCGGGCCCTACAGG
ATCGACGCGAGGGAGGTCTTCCATGCCACGCCCCTCTCCTACGCCATGGTCAACCTACGCCCCCTCCTCCCTGGTAAAAA
TCTCTATGATTGCCCCAACTTTCCCTTGACTAATTTCTGTTCAATTTTCACTTCCA-----CCTCAGAATCACAGTGTAT
TTCTAGGAATTGTTTGTGATTG-----------TTTTTTTTTGTCTGACGGAGATGCCAATGCGGCTGATGGTTT-----
---------------------------------------------------------------------ATTATAAATCA
CACTTTAGGTTTCCAGCGCTAGCACAATTTGTTTCGTTATAATTTTGTACTCTCTCCGTCCTAAATTTAAGAGCGTTTTT
GACACTAGATACTTAGTGTGGTGAATAATCGCAAGTCTGACTCAGAATTATCGACGATAGCGTCGGAGTAGCA--TGCAC
ATTTAAACCCTGACGATGTTGTATTAACATTGTATGTA------------------------------------------
-----------------------TTAACATGTCCCAATCTTGCTCTGCAGGTCATATCCTTTGTTTTGGCATACTCATCG
CCGAGGTTTACAGTTAAGCACTGCCGGCAAGCCTGGAACCTCGT-TTTTTGTCGGACTGTTCATAAACTTTGTTTCACTT
GCTTGTTTCTGAAG--AGTGTCCAAGGTGAAGACACATACAGTAGGAAACACATATTAGAATCAAAAGAATTATTGCACT
CCCTTTCGACATTGTATAGAGGCTGGGTCAACTAATTTGGATTGGAGGGAGTATATCACTCTTTCATTTTGCATTGATCT
C--------TAAATATGCATGGCTAATGTAAATCTGAATGTCAAGGATGTCAAGCGAATTATGCTAGGGTTAGCTATTTA
TATAAGTGAATGGTTCACATAAAAATAGCCAAATAGTTATCTCTTGCTGGAATCTGTTTATACCTGATGGACTCGTGAGT
GATGACA-------------------------------------------------------------------------
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----------------TCGTCATCTTTTTATGAAATATGATATTTACTGTTAT---GTCCATCACTTCCTGCACCGACAA
GTTCACCCAAAA-GCTTAACCCCTTGAGGAAAGGCAGGAAATGTACTCATACTGCAACATTTACTGTGCTACATATACTG
ATGGTATAATAC---------T-TAACTTGAGGTAGCTATCCATTGTTGCCCCCTTTGCTGTCCCGTGGTTCGCAGCTTT
CATAG-------TTCAAACTGTAAAACGTCTACTTACACTGTATGTC--------------TTTTTCCTTAACAAAACAT
ACATGTCCTTGTGTGCCCCAAGCGTGAAGTGAAACGCTTTACTGATCTAAGCACTGATGAGACAAGCGATTTATGGGTGA
CTGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCACAAAGCTTCTTCGCTTACATTTGCAATTCAGGTCAACTCTCAT
TCTCGCTATATATGTACTGAATAGCTTATGCTTCCAAATT-TTATATAATTAGTTCATCCAATTGAAAGTGCATGATGTT
TGGATTCTGCTACTGGGGTTCCGAACAAAATAGATCAGGCTAATCACCTAAATTACACTTAGAATGCCATATGAGGTTCC
TGTCTGTTCTTTGGACTTTTACTCCAAATCTGCTGCTGATTTGATTACCTTGTTTGCCTTTTACCTTT---TAATAACCT
ATGAATGAAAAAGAAGCATTTCCTTATTGATAGCTTTTTGGTACAGGATGGTCCTCAAGCTGGCCAAACAGTTCCGCATG
TCCACATCCATGTGATCCCCAGGAAGAAGGGAGATTTTGAAAATAATGATGAAATATATGACGCGGTTCGTTGACCACCT
GTTTCGTCATCCATATAATTTTCTTATGATTTTTTCCCACTAAATCC---TACTATTTTCCTTTGTAATAGATTGATGTG
AAAGAAAAGGAATTGAAGGAAAAACTTGATCTGGATGTTGAAAGAAAAGATAGAACCATGGAAGAAATGAGTCATGAGGC
TAACGAGTACCGTGCTCTTTTCTCCTAG----------------------------------------------------
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>chr5D_1_TraesCS5D01G147300
AGCATCGTCA---TCCAGTACGAGGCAAACCGCTATCCCGATTGGTGCATGGCAACCTCCGCCTAAGGGTCACGCGAAAA
TCCAGGTGAAGGGGAGTATCGACCAGGAACAAGGGAAAGTGGCGGCAGCTGCAGTATGCCGAGATCATCTAGGACATTTA
TATGGGCTCCTCCTCGCTGGTCATCTCCGGGAATGTTTATCT-AAATATACTGGAAGCAGTAGCATGCCGGGAAGCGTTG
GCCTTAGCTCAAGACTTACAGGTGCAGAAGGTGGTGGTGACTTCAGACTGCAAATGATTGATATCAGATGTCCATGGAGG
GACGGGTGGAGGTTACCTGTCGGTGATCAAAGAAATATCTCTCACAAGCTCTATTTTTAATAACTATAGCTTTATTTCTA
AACGTAGATCAGCAACTAGCGAGGCGCTTTGCCTTGCCAGACACTCTCTTTCACTTGATCAGGGGCGCCACCTGTGGCTG
TTATCCCCGCATGATCCATCTTGTATTCCTCTGAACTCTTTCATAGATCAATAAAGTGTCTGGTTTCCCTAAAAAAAAAA
AGCTATCACCTTCCCCTACTCTGCTCTTCTCCGACTCGGTGCTGAACTGTTGCCTGCTGCTATCCCTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGCTC
CGCCCTGCGCTCGCGTGCCCTCCTCCTCCCTCTGACCCCGCCGCCTCGTACGGGCACGGCCACCCTTCGCCGCCGGACTT
GGCCGCGGGCCACCTCCTCCTTGTCATCTCCGCCGCCGCCGGTGATGGAGGCGTCGGCGTACAAGTTCGGGCCCTACAGG
ATCGACGCGAGGGAGGTCTTCCATGCCACGCCCCTCTCCTACGCCATGGTCAACCTACGCCCCCTCCTCCCTGGTAAAAA
TCTCTATGATTGCCCCAACTTTCCCTTGACTAATTTCTGTTCAATTTTCACTTCCA-----CCTCAGAATCACAGTGTAT
TTCTAGGAATTGTTTGTGATTG-----------TTTTTTTTTGTCTGACGGAGATGCCAATGCGGCTGATGGTTT-----
---------------------------------------------------------------------ATTATAAATCA
CACTTTAGGTTTCCAGCGCTAGCACAATTTGTTTCGTTATAATTTTGTACTCTCTCCGTCCTAAATTTAAGAGCGTTTTT
GACACTAGATACTTAGTGTGGTGAATAATCGCAAGTCTGACTCAGAATTATCGACGATAGCGTCGGAGTAGCA--TGCAC
ATTTAAACCCTGACGATGTTGTATTAACATTGTATGTA------------------------------------------
-----------------------TTAACATGTCCCAATCTTGCTCTGCAGGTCATATCCTTTGTTTTGGCATACTCATCG
CCGAGGTTTACAGTTAAGCACTGCCGGCAAGCCTGGAACCTCGT-TTTTTGTCGGACTGTTCATAAACTTTGTTTCACTT
GCTTGTTTCTGAAG--AGTGTCCAAGGTGAAGACACATACAGTAGGAAACACATATTAGAATCAAAAGAATTATTGCACT
CCCTTTCGACATTGTATAGAGGCTGGGTCAACTAATTTGGATTGGAGGGAGTATATCACTCTTTCATTTTGCATTGATCT
C--------TAAATATGCATGGCTAATGTAAATCTGAATGTCAAGGATGTCAAGCGAATTATGCTAGGGTTAGCTATTTA
TATAAGTGAATGGTTCACATAAAAATAGCCAAATAGTTATCTCTTGCTGGAATCTGTTTATACCTGATGGACTCGTGAGT
GATGACA-------------------------------------------------------------------------
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----------------TCGTCATCTTTTTATGAAATATGATATTTACTGTTAT---GTCCATCACTTCCTGCACCGACAA
GTTCACCCAAAA-GCTTAACCCCTTGAGGAAAGGCAGGAAATGTACTCATACTGCAACATTTACTGTGCTACATATACTG
ATGGTATAATAC---------T-TAACTTGAGGTAGCTATCCATTGTTGCCCCCTTTGCTGTCCCGTGGTTCGCAGCTTT
CATAG-------TTCAAACTGTAAAACGTCTACTTACACTGTATGTC--------------TTTTTCCTTAACAAAACAT
ACATGTCCTTGTGTGCCCCAAGCGTGAAGTGAAACGCTTTACTGATCTAAGCACTGATGAGACAAGCGATTTATGGGTGA
CTGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCACAAAGCTTCTTCGCTTACATTTGCAATTCAGGTCAACTCTCAT
TCTCGCTATATATGTACTGAATAGCTTATGCTTCCAAATT-TTATATAATTAGTTCATCCAATTGAAAGTGCATGATGTT
TGGATTCTGCTACTGGGGTTCCGAACAAAATAGATCAGGCTAATCACCTAAATTACACTTAGAATGCCATATGAGGTTCC
TGTCTGTTCTTTGGACTTTTACTCCAAATCTGCTGCTGATTTGATTACCTTGTTTGCCTTTTACCTTT---TAATAACCT
ATGAATGAAAAAGAAGCATTTCCTTATTGATAGCTTTTTGGTACAGGATGGTCCTCAAGCTGGCCAAACAGTTCCGCATG
TCCACATCCATGTGATCCCCAGGAAGAAGGGAGATTTTGAAAATAATGATGAAATATATGACGCGGTTCGTTGACCACCT
GTTTCGTCATCCATATAATTTTCTTATGATTTTTTCCCACTAAATCC---TACTATTTTCCTTTGTAATAGATTGATGTG
AAAGAAAAGGAATTGAAGGAAAAACTTGATCTGGATGTTGAAAGAAAAGATAGAACCATGGAAGAAATGAGTCATGAGGC
TAACGAGTACCGTGCTCTTTTCTCCTAGATGTATTTCTTACAAACTGTTTTCA-ATTTTTTTTCACTT-----------A
ATAAACTTCTGGACTGTTTGTTCTGCATTGTTTTTCGAGAGTGT--AGCAATGAATATTTTATTTTTCGCTGACCTGGTC
ATGTCGAGTATCAACTGATGAGTCTGAGGTAGTGGGTTACTTATGTACTCCCTCCGTCCGAAAATACTTGTCATCAAAAT
GGACAAAAAGGAGTAGTACGCAATAACAGTTGTTCCTCGCAATTTATGGCCTTATGGATATTGATGGCTTTAGGTTTATT
GATCTCAAACATGCATGAAAAACACAGGCGTCCGAGGCTCTGAGCCTTACAATGCCTGCAATGTTTCTTAGTTTGCAAGG
TTTAATACATGAAAAAAGTACTGCAGGCAAAGTATTTATTTATGAGATGCACAAGACAGTGGCTAGATTGTAGCAAAAAT
GATATATGGTGTTTAGACATTCCATTGCAGGGTATGTAATAGCTTCCTAGGCATGGAGCATTAGCTGTTTTACTTCTCAA
-CCGAAAAGCATTATTTGTTTTACATTTGTGATTATGCCATGAACGATAAAATCTGCTATTATCTATAGTAACCATACTA
TAGGCAACAGCTCTAGCATGGACCTAACATGATCTTTTAATACGTGGAAGACACTGAACTAGGCCTCTTGCAGATTGTTC
T--------------------------------------------------------------------ATGGATATACC
AAGAGTTGCAATTGTAAACTGGCATCACGAATTAATATCAACCAACTAGACGCATCATTTAGTTTCAGTTTACACCTTGG
CTCGACATTGCCTGTACTATTCAAGTTAGCGAAAGGCAAATTTTCTTGATATTACTTTGGAAAGTGCATTAAGGGT----
-TATACCGCACAGAGGTGATA--GTTTAATTGGGTGGGAGTATTCTGCCCATTTTAAAGCCTAAGATGTTACAGCTGATA
CATTGCGCAACATTAGCAAAACTGAATTTGTAATACTCAGTTCAACTTATTCTTGATGGGGACTGGAGGAGCTGTATC
>chr5A_1
AGCATCGGCA---TCCAGTACGAGGCGAACCGCTATCCCGATTGGTGCATGGCATCCTCCGCCTGAGGGTCACATGAAGA
TCATGGTGAAGGGGAGTATCGACCAGGAGCAAGGGAAAGGGGCGGCAGCTGCAGTATGCCGAGATCATCTGGGACA-TTA
TATGGGCTCCTCCTCGCTGGTCATCTCCGGGAATGTTGATCT-AAATATTCTGGAAGCAGTAGCGTGCCAGGAAGCGTTG
GCCTTGGCTCAAGACTTGCTGGTGTAGAAGGTGGTGGTGACTTCGGACTGCAAATGATTGATATCAGATATCCATGGAGG
GACGGGTGGAGTTTACCTGTCGGTGATCAAAGAAATTTCTCTCACAAGCTCT-------ATAGTTGTAGCTTTATTTCTG
AACGTAGATCAGCAACCAGTGAGGTGCTTTGTCTTGCCA---GCTCTCTTTCACTTGATCAGGGGCGCCACCTGTGGCTG
TTATCCCCTCATGATTCATCTTGTATACCTCTGAACTCTTTCATAGATCAATAAAGTGTCTGGTTTCCCCTAGAAAAAA-
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>chr2A_1
AGCATCGTCAGGGTCCAGAACTAGACGAACTGCTATCCCTATTGATGCATGGCAACCTCCGCCTTTGGGTCACGCGAAGA
TTATGGTAAAGGGGAGCGTCAACCAGGAGCAAGGGAAAGGGGCTGTAGCTGCTGTATGCAGAGCTCATCTGGGACA-TTA
TATCGGCTCCTCTTCGTTGGTCATCCCCGGGAATGTTGATCT-ACATGTACTGGAAGCATAAGCGTGCCGGGAAGCGTTG
GCCTTAGCTCAAGACTTACAGTTGCGGAAGTTGGTGGTGACTTCGGATTGCAAAGGGGTGATAGCAGATATCCATGGAAG
GGCAGGTGGAGTTTACCTGTCGGTCATCAAAGAAATTTCTCTCACAAGTTCTATTTTTGATAGCTGTAGCTTTATTTCTG
AAGGTAGATCAGCAATTAGTGATGCGCTTTGTCTTGCCAGACGCTCTCTTTCGCTTGATCAGGGGCGCCATGTGTGGCTG
TTATCCCCTCATGATCCATCTTGTATTCCTCTGAATTCTATCATAGATCAATAAAGTGTCTGGTTTTCCCTTAAAAAAA-
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>chr5A_2
-GCATCGTCA---TCCAGTACAAGGCGAACCGCTATCCC-ATTGGTGCATGGCAACCTCCGCCTGAGGGTCACGCGAAAA
TCCAGGTGAAGGGGTGTATCGACCAGGAGCAAGGGAAAGGGGCGGCAGCTGCAGTATGCCAAGATCATTTGGGACA-TTA
TTTGGGCTCCTCCTCGCTGGTAATCTCT-GGAATGTTGATCT-AAACATACTGGAAGTAGCAGCATGCCGGGAAGCGTTG
GCCCTAGCTCAAGACTTACAGGTGCAGAAGGTGGTGGTGACTTCAGACTGCAAAGGATTGATATCAGATATCCATGGAGG
GATGGGAGGAGGTTACCTGTTGGTGATCAAAGAAATTTCTCTCATAAGTTCTATTTTTGATAGCTATAGCTTTATTTCTG
AGCGTAGATCAGCAACTAGTGAGGCGCTTTGCCTTGCCAGACATTCTCTTTCACTTGATCAGGGGCGCCACCTGTGGCTG
CTAACCCCTTATGATCTATCTTGTATCCCTCTAAACTCTCTCATAAATCAATAAAGTGTCCAGTTTCCCCTAAAAAA---
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>chr2B_2
-GCATCATCA---ACTAGTACAAGGCGAATCGCTATCCCGATTGGTGCATGGCAACCTCCGCCTGAGGGTCACGCGAAAA
TCCAGGTGAAGGGGTGTATCGACCAGGAGCAAGGGAAAGGGGCGGCAGCTGCAGTTTGCCAAGATCATTTGGGACA-TTA
TTTGGGCTCCTCCTTGCTGGTCATCTCCGGGAATGTTGATCT-AAATATACTGGAAGCAGTAGCATGCCAGGAAGCTTTG
GCCTTAGCTCAAGACTTACAGGTGCAGAAGGTGGTGGTGACTTTGGACTGCAAAGGATTGATATCAGATATCCATGGAGG
GACGGGAGGAGGTTACCTGTCGGTGATCAAAGAAATTTCTCTCACAAGTTCTATTTTTGATAGCTATAGCTTTATTTCTG
AACGTAGATCAGCAACTAGCGAGGCGCTTTGCCTTGCGAGACACTCTCTTTCACTTGATAAGGGGCACCACCTGTGGCTG
CTATCCCCTTATGATCCATCTTGTATCCCTCTGAACTATCTCATAGATCAATAAAGTGTTTGGTTTCCCCTCAAAAATAA
AATCT---------------------------------------------------------------------------
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>chr3A_2
-GCATCGTCA---TCCAGTACAAGGCGAACCACTATCCCGATTGGTGCATGGCAACCTCCGCCTAAGGGTCATGGGAAAA
TCCAGGTGAATGGATGTATCGACCAGGAGCAAGGGAAAGGGGCGGCAGCTGCAGTATGCCGAGATCATTTGGGACA-TTA
TTTGGGCTCCTCCTCGCTGGTAATCTCCGGGAATGTTGATCT-AA-TATACTAGAAGCAGTAGCATGCCGGGAAGCGTTG
GCCCTAGCCCAGGACTTGCAGGTGCAGAAGGTGGTGGTGATTTCGGACTGCAAAGGATTGATATCAGATATCCATGGAGG
GACGGGAGGAGGTTACCTGTCGGTGATCAAAGAAATTTCTCTCACAAGTTCTATTTTTGATAGCTATAGCTTTATTTCTG
AGCGTAGATCAGCAACTAGTGAGGCGCTTTGCCTTGCTAGACACTCTCTTTCACTTGATTAGGGGCGCCACCTGTGGCTG
CTAACCCCTTATGATCTATCTTGTATCCCTCTGAACTCTCTCATAAATCAATAAAGTGTCTGGTTTCCTGTAAAAAAAA-
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>chr7D_2
-GCAGCGTCA---TCCAGTACAAGGCGTACAGCTATCTCGATTGGTGTTTGGCAACCTCCGCCTGAGGGTCACGCAAAAA
TCCAGGTGAAGGGATGTATCGACCAAGAGCAAGGGAAAGGTGCGGCAGCTGCAGTATGCAGAGATCATTTGGGACA-TTA
CCTGGGCTCATCCTCGCTGGTCATCTCCGAGAATGTTGACCTAAA-TATACTGGAAGCAATAGCATGTCGCGAAGCGTTG
GCCTTAGCTCAAGACTTACAGGTGCAGAAGGTGGTGGTGTCTTCGGACTGCAAAGGATTGATATCAGATATCCATAGAGG
GACGGGAGGAGTTTACCTGTCGGTGATCAAAGAAATTTCTCTCACAAGTTCTATTTTTGATAGCTATAGTTTTATTTCTG
AACGTAGATCAGCAAGTAGTGAGGCACTTTGCCTCGCTAGACACTCTCTTTCACTTGATCAGGGGTGCCACATGTGGCTG
CTGTCCCCTCATGATCCATCTTGTATCCCTCTGAACTCTCTCATAGATCAATAAAGTGTCTGGTTACCTCTCAAAAAAAA
A-------------------------------------------------------------------------------
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>chr6A_2
-GCATCGTCA---CCCAGCACAAGGCGTACCGCTATCCCGAGTGGTGTATGGCAACCTCCGCCTAAGGGTCACGCGAAAA
TCCAGGTGAAGGGATGTATTGACCAGGAGCTAGGGAAAGGGGCGGCAGCTGCAGTTTGCCGAGATCATTTGGGACA-TTA
TTTGGGCTCCTCCGCGTTGGTCATCTCCAGTAATGTTGATCTAAG-TATACTGGAAGCAGTGGCATGCCGGGAAGCGTTG
GCCTTAGCTCAAGGCTTACACGTGCAGAAGGTGGTGGTGGCTTCGGACTGCAAAGGATTGATATCAGATATCCAAAGAGG
AACTGGAGGAGGTTACCTGTCGGTGATCAAAGAAATTTC--TCACAAGTTCTATTTTTGATAGCTATAGCTTTATTTCTG
AAAGTAGATCAGCTATTAGTGAGGCGCTTTGCCTTGCCAGACA--CTCTTACACTTGATCAGGGGCGCCACATGTGGCTT
CTATCCCCTCATGATCCATCTTGTATCCCTCTGAACTCTCTTATTGTTCAATAAAGTGTCTGGTTCCCCCTAAAAAA---
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>chr5B_870
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-------------------------------------------------------------------------TGTGCTC
CGCCCTGCGCTCGCGTGCCCTCCTCCTCCCTCTGACCCCGCCGCCTCGTA------CGGCCACCCTTCGCCGCCGGACTT
GGCTGCGGGCCACCTCCTCCTTGTCATCTCCGCCGTCGCCGGAGATGGAGGCGTCGGCGTACAAGTTCGGGCCCTACAGG
ATCGACGCGAGGGAGGTCTTCCACGCCACGCCCCTCTCATACGCCATGGTCAACCTACGCCCCCTCCTCCCTGGTAAACA
TCTCTATGATTGCCCCAACTTTCCCTTGCCTAATTTATGTTCAATTTTCACTTCCACCTCACCTCAGAATCACAGTGTAT
TTCTAGGAATTGTTTGTGATTCTATAA--------TTTTTTTGTCTGACGGAGATGCCAATGCGGTTGATGGTACTCCCT
CTGTAAACTAATATAAGAGCGTTTAGATAGTGATCTAAACGCTCTTATATTAGTTTACAGAGGGAGTAGATTATAAATCA
CACATTAGGTTTCCAGCGCTAGCACAATTTTTTTCGGAC-AATTTTGTA-------------------------------
--------ATACTTGGTGCAGTGAATAATCGCAAGTCTGGCTCACTATTATCAGCTATGTCGTCGGAGTAGCACAATGAC
ATTTAAACCCTGACGATGTTGTACTAACATTGTATGTATTTGTAGTATAGCAGCTATTTATGATTACGACTTTATAGATC
GCGGATATACTATTTGTGCTATATTGACATGTCCCAATCTTACACTGCAGGTCATATCCTTTGTTTTGGCATACTCGTCG
CCAGGATTTACAGTTAAACACTGCCGGCAAGCCTGGAATCTCGT-TTGTTGTCAGACTGTTCATACACTTTGTTTCA---
-CTTGTTTCTGAAG--AGTGTCCAAGGTTCAGACACATACAGA---AAGCACAGATCAGAATCAAAAGAATGAAATTTGT
ATG-----------------------------------------------GTATATCACTCTTTCATTCTGCACTGATCT
C--------TAAAAATGCATGGCTAATGTAAATCTGAATATAAAGGATGTCAAGAAATTTATGCTAGGGTTAGCTATTTA
TATAAGTGAATGGTTCATATAAAAATAGCCAAATGGTTATCTCTTGCTGGAATCTGTTTATACTTGATGGACTCGTGAGT
GATGATAGT-----------------------------------------------------------------------
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------------------GTCATCTTTTTATGAAATATTATGTTTACTATTAT---GCCCATCACTTTCTGCACCGACAA
GTTCACCCAAAAAGCTTAGCCTCTCGAGGAAAGGCAGGAAATGTACTCATACTGCAACATTTACTGTGCTACATATACTG
ATGGTATAATAC---------TTTAACCCGAGGTAGCTATCCATTATTACCCCGTTTGCTGTCCTGTGGTTCACAGCTTT
CATAGTTCAAACTTCAAACTGTAAAACGTCTACTTACATTGTATAGTTTGGTTATACATATTTTTTCCTTAACAAAACAT
ACATGTCCTTGTGTGCCCCAAGCGTGAAGTGAAACGCTTTACTGATCTAAGTACTGATGAGACAAGTGATTTATGGGTCA
CTGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCACAAAGCTTCTTCGCTTACATTTGCGATTCAGGTCAACTCTCTT
TCTCTCTATATATGTACT-AATAGCTTATGCTTCCAAA-T-TTATATAATTAGTTCATCCAATTGAAAGCTCATGATGTT
TGGATGCTGCTACTGGGGTCCAGAACAAAATAGATCAGGCTAATCACCTAAATTACACTTACACTGCCATATGAGGTTCC
TGTCTGTTCTTTGGACTTGTACTCCAGATCTGCTGCTGATTTGATTACCTTTCCC-CCTTTTACCTTTAACTAATAACCT
ATGAATGAAAAAGAAGCATTTCCTTATTGATAGCTTTTTGGTACAGGATGGTCCTCAAGCTGGCCAAACAGTCCCGCACG
TCCACATCCATGTGATCCCCAGGAAGAAGGGAGATTTCGAAAATAATGATGAAATATATGACGCGGTTCGTTTACCACCC
GTTTTTCCATCCATATAA-CTTCTTATGATTTTTTT-CATTAAATCCTAGTACCATTTTTCTTTGTAACAGATAGATGTG
AAAGAAAAAGAAATGAAGGAAAAGCTTGATCTGGATGTTGAAAGAAAAGATAGAACCATGGAAGAAATGAGTCATGAGGC
TAACGAGTACCGTGCTCTTTTCTCCTAGATGTATTTCTTACAAACCGTTTTCTAATTTTTCACTTAGTGTTTTCACAGAA
ATAAACTTCTGGACTGTTTGTTCTGCATTGTTTTTCAAGA--GT--AGCAATGAATATTTTATTTTCCACTGACCTGGTG
ATGTCGAGTCTCAACTGACGAGTCTGAGGTGGTGGCTTACTTATGTA---------------------------------
-------------------------------------------------------------------------GTATATT
GATCCCAAACATGCATGAAAACACACAGGCA-------TCCGAGCCTTACAATTCCTGCGTAGTTTCTTAGTTTGCAGGG
TTCAATACATGAAAAAAGTATTCTGGGCAAAGTATTTATTTATGAGATGCACAAGATAGTGGCTAGATTATAGC-AAAAT
GATATATGGTGTTTAGACATTCCATTGCTGGGG-TGTAATAGCTTCCTAGGCATGGAGCATTAGCTGTTTTACTTCTCAA
CCCAAAATGCATTATTTGTCTTGTGTTTGTGATCAT------------GAAATCTGCTATTATCAGTAATGACCATACTA
TAGGCAACAGCGCTAGCATGGACCTAGCATGATCTTTTAATATGTGGACGACACTGAACTAGGCGTCTTGCAGATTGTTC
C--------------------------------------------------------------------AAGGATATACT
AAGAGTTGCAATTCTAAACTGGCATCAGGAATTAATATCAACGAACCGGACGCATCATTTAGTTTCAGTTTACACCTTGG
CTTGACATTATCTGTACCATTTAAGTTAGCCAAAGCCAATTTTTCTCCATATTACTTTGGAAAGTGCATTAAGGGT----
-TATACCGCACAGAGGTGATATAGTTTATTTGGGTGGGAGTATTCTGCTCATTTTAAAGCCTAAGATGTTACAGCTGATA
CATTGCACAGCATCAGCAAAACT-AATTTGTAATACTCATTTTAACATATTCCTGATGGGGACGGGAAGAG-------
>chr5A_870
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-------------------------------------------------------------------------TGTGCTC
CGCCCTGCGCTCGCGTGCCCTCCTCCTCCCTCTGACCCCGCCGGCTCGTACGGGCACGGCCACCCTTCGCCGCCGGACTT
GGCCACGGGCCACCTCCTCCTTGTCATCTCCGCCGTCGCCGGAGATGGAGGCGTCGGCGTACAAGTTCGGGCCCTACAGG
ATCGACGCGAGGGAGGTCTTCCACGCCACGCCCCTCTCCTACGCCATGGTCAACCTACGCCCCCTCCTCCCTGGTAAAAA
TCTCTATGATTGCCCCAACTTTCCCTTGCCTAATTTCTGTTCAATTTTCACTTTCA-----C------------------
----AGGAATTGCTTGTCAGCTTGTGGTTGTATTTTTTGTTTGTTTGACGGAGATGTCAATGTGGTTGCTGGTGG-----
---------------------------------------------------------------------ATAATAAATCG
CACTTTAGGGTTCCAGCGCTAGCACAATTTGTTTCCTTATAATTTTGTA-------------------------------
--------ATACTTGGTGTGGTGAATAATCGCAAGTCTGACTCACAATTATCCATGAT---GTCGGAGTAGCACGTGCAC
ATTTAAACCCTGAAGATGTTGTATTAACATTGTATGTATTTGTAGTATAGCAGCTATTTATGATCACAACTTTATAGATC
GCGG-TATACTGTTTATGCTATATTAACATGCCCCAATCTTACACTGCAGGTCATATCCTTTGTTTTGGCATACTCATTG
CCGAGATTTACAGTTAAACACTGCCGGCAAGCCTGGAATCTCGTTTTTTTGTCAGACTGTTCATAAACTTTGTTTCA---
-CTTGCTTGTTTCTGAAGTGTCCAAGGTGCAGATATATACAGTAGGAAACACAGTTTAGAATCAAAGGAATGAAATTTGT
ATG-----------------------------------------------GTATAATAATCTTTCATTTTGCACAGATCT
CTAAAAAAGTAAAAATGCATGGCTAATGTAAATCTGAATATCAA-GATGTCAAGAGAATTATGCTAGGGTTAGCTATTTA
TATAAGTGAATGGTTCATATAAAAGTAGCCAAATAGTTATCTCTTGCTGGAATCTGTTTGTACCTGATGGACTCGTGAGT
GATGACGTCATCATCTTTTTTTTTTTTTTGAAACCGTACACCCGCAGGCATACGTTACTTGTATTTATACGAGTCGGAAA
ACAGTACATACAACGTAGATACCAAACGTACACACACGAAAATACAGGAAGGATACAATCCGTAGAGCTGGCCTCGCCAT
ACATCGCAGAAGACCCCAAACAAAGAAAATTTGCAACCCCATCCTTGGTCTTCTCCGCCGATGCCGCTCCGTCGCGTCGA
AGCCAACCACCACCGCTGGAGGCCGGAAATAACACGAAGGAGCGGCTCACATAGAGCTGAAGGAACCCCTTGCACATTGG
CGTTGGTGAGCCGCAGTAGACACCAGATGCAAAGAACTGGATTTGATCCTAATTTTTCCATCGGCCGGAGGCAACGGCCA
TGTCGGCCGTGCTCCCCAAGCTCCTTCACCTCCAGGCCTGGGGACGACGCCACTCTGCCTCCCTGAAGACAGCCAGGCCC
TTCCACCGCGAGCCAGATCCGATGCCAGCCGTGGACTCCATCCATCCCAAGCAGGGCACCGTCAGCACTGCTCCCAACCG
TACCTCCGGTCGAGCCCTGCAGCAAAACACACATAGTCCTCACACGCTCCTCGGCGCCGCACAGAAGCACACCACCGGAG
CAGGGTTGGAGCGGGAGGAACCAAACACCCACAAGCTTCTCGCTGGAAGTAGGACTCCCAACGAAACGCGGTCGAAGCCG
GGGCACCTTTATTCCGACGCGGCGCCGTCGCCGGCGTCTCAACAACGCCTCCTGGAACCTATCTACAGGCCCGTGCTTCC
CCGAGGCTCCCCCCCACCTGCCGAGGCCAAGCCGGCCATCGGAGACGAGGAGGAGCGGCGAGGTCGCCGGCGGAAAGACA
GGAGATCTCGACCTGCTTCTGTTCGCCTCTCGCGTTCTGTGGAGAGTTCGAGAGGTGTCAAAGGATAGCTGACATGAGTT
TTTGATGGGTTTAACGTCATCATCTTTTTATGATATATGATCTTTGCTATTATTATGTCCATCACTTTGTGCACCGACAA
GTTC--CCAAAATGCTTAACCTCTCGAAGAAAGGCAGGAAATGTACTCATACTGCAACATTTACCGTGCTACATATACTG
ATGGAGTGATGGTATAATACTT-TAACTCGAGGTAG-----------------CTTTGCTGTCCCTTGGTTCGCAGCTTT
CATAGTTC---------ACTGTAAAACGTTTACTTACATTGTAAAGTTTGGTTATAC--ATTTTTTCCTTAACAAAACAT
ACATGTCCTTGTGTGCCCCAAGCGTGAAGTGAAACGCTTTACTGATCTAAGCACTGATGAGACAAGTGATTTATAGGTCA
CTGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCACAAAGCTTCTTCACTTACATTTGCGATTCAGGTCAACTCTCTG
TCTCTCTATATATGTACTGAATAGCTTATGCTTCGAAATTTTTATATAATTAGTTCATCCAATTGAAAGCGCATGATTTT
TGGATTCTGCTACTGGGGTCCAGAACAAAATAGATCAGGCTAATCACCTAAATTACGCTTACACTGCCATATGAGGTTCC
TGTCTGTTCTTTGGACTTTTACTCCAGATCTGCTGCTGATCCGGTTACCTTGTTCACCTTTTACCTTT---TAATAACCA
ATGAATGACAAAGAAGCATTTCCTTATTGATATCTTTTTGGTACAGGATGGCCCTCAAGCTGGCCAAACAGTTCCGCACG
TCCACATCCATGTCATCCCCAGGAAGAAGGGAGATTTTGAAAATAATGATGAAATATATGACGCGGTTCGTTGCCCACCT
GTTTTGCCATCCATATAA-TTTCTTATGATTTTTTT-CACTAAATCCTACCA----TTTTCCTTGTAACAGATTGATGTG
AAAGAAAAAGAATTGAAGGAAAAGCTCGATCTGGATGTTGAAAGAAAAGATAGAACCATGGAAGAAATGAGTCATGAGGC
TAACGAGTACCGTGCTCTTTTCTCCTAGATGTATTTCTTACAAACAGTTTTCT-ATTTTTCACTTAGTGTTTTCACTGAA
ATAAACTTTTGGACTGTTTGTTCTGCATAGTTTTTCGAGA--GTGTAGCAATGAATATTTTATTTTCCACTGACCTGGTG
ATGTCGAGTCTCAGCTGATGAGTCTGAGGTGGTGGGTTACTTATGTAGTATGTG--------------------------
----------------------ATGACAGTTGTTCCTCGCTAGTTGTGGCTTTATGGATATTAATGT-TTTAGGTTTATT
GATCCCAAACATGCATGAAAAAACACAGGCG-------TCCGAGCCTTACAATCCCTGCATTGTTTCTTAGTTTGCAAGA
TTCAATACATGAGAAAGGTATTGTGGGCAAAGTATTTACTTATGAGATGCACAAGGCAGTGGCTAGATTATAGCAAAAAT
GATATATGGTGTTTAGACATTCCATTGCAGGGGATGTAATAGCTTCCTAGGTATGGATGATTAGCTGTTTTACTTATCAA
-CC-AAAAGCATTATTTGTTTTATGTTTGTGATTATGCCATGAATGATGAAATCTGCTATTATCAGTAGTAACCAAACTA
TAGGCAACAGCTCTAGCATGGACCTAACATGATCTTTTAATACGTGGAACACACTGAACTAGGCCTCTTGCAGATTGTTC
TAAGGATATACTAAGAGTCTCTTGCAGATTGTTCTAAGGATATACTAAGAGTCTCTTGCAGATTGTTCTAAGGATATATT
AAGAGTTGCAATTGTAAACTGGCATCACGAATTAATATCAACCAACTGGACGCATCATTTAGTTTCAGTTTACACCTTGG
TTCGACATTACCTGTACCATTTAAGTTGACAAAAGTCAAATTTTCTCGATATTACTTTGT-AAGTGCATTAAGGGTTATA
TTATACCGCACAGAGGTGATA--GTTTATTTGGGTGGGAGTATTCTGCTCATTTTAAAGCCTAAGATGTTACAGCTGATA
CATTGCACAACATTAGCAAAACTGAATTTGTAATACTCAGTTCAACATATTCCTAATGGGGACGGGAAGAG-------
>SNPs
--------------------------S-----------------------------------------------------
----------------------------S----------S------------------------------S-----S---
-------------------------------------S------------------------------------------
---------------------------------------------------------------------S----------
------------------------------------S---------------------S---S----------------S
--------------------------------------------------------------------------------
--------S------------------------------------------------------------SS---------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
--------------------------------------------------------------------------------
-----------------------------------S------S-------------------------------------
-----------------------S--------------------------------------------------------
----------------------------S---------------------------------------------------
---------------------S-------------------------------------------S-------SS-----
--------------------------------------------------------------------------------
-------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS------S-----------------------------S-------S-----SS--------------------
--------------------------------------------------------------------------------
-----------------------------------------S-S------------------------------------
-----S-----------S--------------------S--------------S-----------------------SSS
S----------------------------S-----------------------S-----------------S-SSSSSS-
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S------
-------------S-------------------------S--------------S-------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S------S------------------S------------
---------------------S--S-------------------------------------------------------
----------------------------S----------------S--S-------------------------------
--------------------------------------S-----SSS---------------------------------
------------------------------------------------------------------S-----------S-
-------------------------------------------------------------S----------------S-
----S----------------------------------------------------------------S----------
-------------------S-S---------------------------------------S-S----------------
--------------------------S---------------------------SS------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
----S-S-----------S----------------SS----------------S-----S--------S-----------
--------S--------------S--------------------------------------------------------
---------------------------------------------S------S-------SSSSSSS-------------
----------------------------------------SS------------------------S-S----------S
---------S--------------------S----------------S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS--S---------------S-S--S----S-----------S---SS------------
----S-----------------SSSSS-SSSSSSSSSS--S------------S------S-------------------
--S-----------------S--SS--------------------------------------------S----------
--------------------------------S-----------------------------------------------
---S-------------------SS-------------------S---S---------------SS--------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S--------S
-----------------------------------------------S--------------------------------
---------S-------S---S--------S----S----------S---------------------------------
----------------------------S-------------------S-------------------------------
------S---------------------------------------S-----S----------S---S---SSSSSSS
>forward_622
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TGAACTGTTGCCTGCTGCTA------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_1835
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TGCACT
CCCTTTCGACATTGT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>forward_1149
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTGCCCCAACTTTCCCTTGA---------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_4229
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GCTGACCTGGTC
ATGTCGAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
