>input_sequence_40949
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--------------------------------------ATGAGCAGCCCCATGGAGGAAGCTCACCATGGCATGCCGTCG
ACGACGACGGCGTTCTTCCCGCTGGCAGGGCTCCACAAGTTCATGGCCATCTTCCTCGTGTTCCTCTCGTGGATCTTGGT
CCACTGGTGGAGCCTGAGGAAGCAGAAGGGGCCGAGGTCATGGCCGGTCATCGGCGCGACGCTGGAGCAGCTGAGGAACT
ACTACCGGATGCACGACTGGCTCGTGGAGTACCTGTCCAAGCACCGGACGGTCACCGTCGACATGCCCTTCACCTCCTAC
ACCTACATCGCCGACCCGGTGAACGTCGAGCATGTGCTCAAGACCAACTTCAACAATTACCCCAAGGTGAAACTGAAAGA
ACCCCTCAGCCTTGTGAATTTTTTTGCCAAGGTTCAGAAGTTTACACTGACACAAATG---------------TCTGAAA
TTGTACGTGTAGGGGGAGGTGTACAGGTCCTACATGGACGTGCTGCTCGGCGACGGCATCTTCAACGCCGACGGCGAGCT
CTGGAGGAAGCAGAGGAAGACGGCGAGCTTCGAGTTCGCTTCCAAGAACCTGAGAGACTTTAGCACGATCGTGTTCAGGG
AGTACTCCCTGAAGCTGCGCAGCATCCTGAGCCAGGCTTGCAAGGCCGGCAAAGTCGTGGACATGCAGGTAACCGAACTC
AGTCCCTTGGTCATCTGAACATTGATTTCTTGGACAAAATTTCAAGATTCTGACGCGAGCGAGCGAATTCAGGAGCTGTA
CATGAGGATGACGCTGGACTCGATCTGCAAGGTGGGGTTCGGGGTCGAGATCGGCACGCTGTCGCCGGAGCTGCCGGAGA
ACAGCTTCGCGCAGGCGTTCGACGCCGCCAACATCATCGTGACGCTGCGGTTCATCGACCCGCTGTGGCGCGTGAAGAAG
TTCCTGCACGTCGGCTCGGAGGCGCTGCTGGAGCAGAGCATCAAGCTCGTCGACGAGTTCACCTACAGCGTCATCCGCCG
GCGCAAGGCCGAGATCGTGCAGGCCCGGGCCAGCGGCAAGCAGGAGAAGGTGCGTACGTGATCGTCG----TCGTCAAGC
TCCGGATCGCTGGTTTGTGTAGGTGCCATTGATCACTGACACACTAGCTGGGTGCGCAGATCAAGCACGACATACTGTCG
CGGTTCATCGAGCTGGGCGAGGCCGGCGGGGACGACGGCGGCAGCCTGTTCGGGGACGACAAGGGCCTCCGCGACGTGGT
GCTCAACTTCGTGATCGCCGGGCGGGACACCACGGCCACGACGCTCTCCTGGTTCACCTACATGGCCATGACGCACCCGG
CCGTGGCCGAGAAGCTCCGCCGCGAGCTGGCCGCCTTCGAGGCGGACCGCGCCCGCGAGGATGGCGTCGCGCTGGTCCCC
TGCAGCGACTCAGACGGCGACGGCTCCGACGAGGCCTTCGCCGCCCGCGTGGCGCAGTTCGCGGGGCTGCTGAGCTACGA
CGGGCTCGGGAAGCTGGTGTACCTCCACGCGTGCGTGACGGAGACGCTGCGCCTGTACCCGGCGGTGCCGCAGGACCCCA
AGGGCATCGCGGAGGACGACGTGCTCCCGGACGGCACCAAGGTGCGCGCCGGCGGGATGGTGACGTACGTGCCCTACTCC
ATGGGGCGGATGGAGTACAACTGGGGCCCCGACGCCGCCAGCTTCCGGCCGGAGCGGTGGATCGGCGACGACGGCGCGTT
CCGCAACGCGTCGCCGTTCAAGTTCACGGCGTTCCAGGCGGGGCCGCGGATCTGCCTCGGCAAGGACTCGGCGTACCTGC
AGATGAAGATGGCGCTGGCCATCCTGTGCAGGTTCTTCAGGTTCGAGCTCGTGGAGGGCCACCCCGTCAAGTACCGCATG
ATGACCATCCTCTCCATGGCGCACGGCCTCAAGGTCCGCGTCTCCAGGGCGCCGCTCGCCTGA-----------------
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>chr4A_1_TraesCS4A01G019400
CTGTTCGGTTATTCTTTCATTGTTTGCCATGGAGACATGAATTATCTTCATCTGATACTTGTCAAATTAGAAGTGATCTT
CATTAGTTGTACATCATCCACAGCTGCTACGGTAGTACCAACAGAAAACGGCCAGCTTGAAAGTTTTGGAATGCAATGTT
AGGGAGTACTATTTAGTAGAGCATATATATGATAAAAGTGTTCTCATCTGTGGAACATATTTATTTGGCAGCACTAGATG
CCTCGGCATAT----TGCAAGGTTTTTAATATTTGCGATCTTTTCTGTTTC-----------------------------
----AAGCTTCT--------------------------------------------------------------------
-------------------------------------------------------------AATAAATAGAAGGTGACCA
CTTTCATCAAAATTTTCTTCTG----------------------------------------------------------
-------TTTAGCTTCTGCTACAAATTTCTAATAAATATAGAAGGGGG-AACTTTCAGCAAGATTTTTTATATTTGTGAT
TTTCAGGCTTTTTCCATTTAGGGAGAACATCAGAGCACCCCTTGACAGTTGACACCCCTTCATTCGAAATTTCTCAACTT
GTTCTGC-TTTGACTTCAAAAACTGTTTCACTGAAAGATGCACTTTGTATTGGTTAGTGCGGGTTCAATAAAGACCAGAT
GGACCATAACCATGGCTCCATGGCTCCAACTGTGAAGATGACATAATCACAACGCTAACTGTCATC-AAACGCATCACCT
ACATCCCCCGCAAAAC-GAAATAAAAATGCATCAGTGCATCACCTACATTTATAGTAAAACAGAAGGAAAATGCAGAATC
CATGACCTAGCTTAGCACCAAGCACATACTAACATACCTAGT--TATGCATATAAAAATGAGTGTTTTCTTGGTCAGCAG
ATCACAAAAAGGACACAAACGGTAGGTTCCATCTAGTCAGGGGGTTAGGTTAGGGACGCCATGTGGATGAGGCAATCTTA
ATTCTCGGCCACACCAAGATTGTTTGGTGCTCGGCGCCACTAATGCCCAATATATTACCTAACCGAGCCATCCAAATGCT
ACATAGAATTAATCCTCCTGTAGACTGAACCCACTTG-ATGAGCAGCCCCATGGAGGAAGCTCACCATGGCATGCCGTCG
ACGACGACGGCGTTCTTCCCGCTGGCAGGGCTCCACAAGTTCATGGCCATCTTCCTCGTGTTCCTCTCGTGGATCTTGGT
CCACTGGTGGAGCCTGAGGAAGCAGAAGGGGCCGAGGTCATGGCCGGTCATCGGCGCGACGCTGGAGCAGCTGAGGAACT
ACTACCGGATGCACGACTGGCTCGTGGAGTACCTGTCCAAGCACCGGACGGTCACCGTCGACATGCCCTTCACCTCCTAC
ACCTACATCGCCGACCCGGTGAACGTCGAGCATGTGCTCAAGACCAACTTCAACAATTACCCCAAGGTGAAACTGAAAGA
ACCCCTCAGCCTTGTGAATTTTTTTGCCAAGGTTCAGAAGTTTACACTGACACAAATG---------------TCTGAAA
TTGTACGTGTAGGGGGAGGTGTACAGGTCCTACATGGACGTGCTGCTCGGCGACGGCATCTTCAACGCCGACGGCGAGCT
CTGGAGGAAGCAGAGGAAGACGGCGAGCTTCGAGTTCGCTTCCAAGAACCTGAGAGACTTTAGCACGATCGTGTTCAGGG
AGTACTCCCTGAAGCTGCGCAGCATCCTGAGCCAGGCTTGCAAGGCCGGCAAAGTCGTGGACATGCAGGTAACCGAACTC
AGTCCCTTGGTCATCTGAACATTGATTTCTTGGACAAAATTTCAAGATTCTGACGCGAGCGAGCGAATTCAGGAGCTGTA
CATGAGGATGACGCTGGACTCGATCTGCAAGGTGGGGTTCGGGGTCGAGATCGGCACGCTGTCGCCGGAGCTGCCGGAGA
ACAGCTTCGCGCAGGCGTTCGACGCCGCCAACATCATCGTGACGCTGCGGTTCATCGACCCGCTGTGGCGCGTGAAGAAG
TTCCTGCACGTCGGCTCGGAGGCGCTGCTGGAGCAGAGCATCAAGCTCGTCGACGAGTTCACCTACAGCGTCATCCGCCG
GCGCAAGGCCGAGATCGTGCAGGCCCGGGCCAGCGGCAAGCAGGAGAAGGTGCGTACGTGATCGTCG----TCGTCAAGC
TCCGGATCGCTGGTTTGTGTAGGTGCCATTGATCACTGACACACTAGCTGGGTGCGCAGATCAAGCACGACATACTGTCG
CGGTTCATCGAGCTGGGCGAGGCCGGCGGGGACGACGGCGGCAGCCTGTTCGGGGACGACAAGGGCCTCCGCGACGTGGT
GCTCAACTTCGTGATCGCCGGGCGGGACACCACGGCCACGACGCTCTCCTGGTTCACCTACATGGCCATGACGCACCCGG
CCGTGGCCGAGAAGCTCCGCCGCGAGCTGGCCGCCTTCGAGGCGGACCGCGCCCGCGAGGATGGCGTCGCGCTGGTCCCC
TGCAGCGACTCAGACGGCGACGGCTCCGACGAGGCCTTCGCCGCCCGCGTGGCGCAGTTCGCGGGGCTGCTGAGCTACGA
CGGGCTCGGGAAGCTGGTGTACCTCCACGCGTGCGTGACGGAGACGCTGCGCCTGTACCCGGCGGTGCCGCAGGACCCCA
AGGGCATCGCGGAGGACGACGTGCTCCCGGACGGCACCAAGGTGCGCGCCGGCGGGATGGTGACGTACGTGCCCTACTCC
ATGGGGCGGATGGAGTACAACTGGGGCCCCGACGCCGCCAGCTTCCGGCCGGAGCGGTGGATCGGCGACGACGGCGCGTT
CCGCAACGCGTCGCCGTTCAAGTTCACGGCGTTCCAGGCGGGGCCGCGGATCTGCCTCGGCAAGGACTCGGCGTACCTGC
AGATGAAGATGGCGCTGGCCATCCTGTGCAGGTTCTTCAGGTTCGAGCTCGTGGAGGGCCACCCCGTCAAGTACCGCATG
ATGACCATCCTCTCCATGGCGCACGGCCTCAAGGTCCGCGTCTCCAGGGCGCCGCTCGCCTGATCTTGACCTGGTTCCGG
CGACGGTGAT------GGACGCTCCGGTGGCTGGCTGGCCGGACGGCCGGCGCGTTATGACAGGCTCGATTTAGCTTGGC
AACTGTGATAAACTCGTATATGTAGGCAGAGTGGAGAGGGTGTTGATCGATTCGCCATGGACGTTGCTCGTCCGTTGTTA
CCATCGTACCATGTTTGTATTGCTTCTAGATCACTTTATAGTTCGTGTTTGTTCTTGAGCCTAAGTATTTATTGCACATT
TCAAAAGTGACAAATGTATGCAATTGTCTTTTTGGGGTGTTTTCTAAGGGTAGTATTTTCGTAGATTTATTTTGTCGACC
AAACCCTGGCCGTCACACATGATTCGATCCCTCTTGCCGCCGCCAGCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGCTTGTGGGGAGTCCAGTATGGAGGAGG
GCGACGACGATGAGTGGTCGGATTACAACTGTCGACAGCTGATGCTCGTTGGCGGCACTAGTGAAGCCGACATTGGTCGG
AGGTTCACATATCCAGTGGGAAGGTCATCAACGGCAGCCTGGCTTGGCCCGGACATCGGAGAAGAGGGCGTCGATGTATG
GTCCTGGATGGCGACAAGCTTGATATCAAACTCGGCCCTATCATGCAGCGGCATGTTTTCTTCTTCTTCTTCAGGTTTAC
TTTAGGAAGTCCCAGTTTAGGAGTAATGTTTTCCCAGTTTTATTGGTGTGTTTATCGTCGGCGGAGGACATGTGGAACTG
TGTCTTCGATTTTCTTTTAGGATCTACCC
>chr4B_2
-TGTTTGGTTATTCTTTCATTGTTTGCCATGGAGACATGAGTTATCTTCATCAGATCATTGTCAAATTTAAAGTGTTCTT
CATTTATTTTACATCATCCACAACTCCTACGGTAGTACCAACAGAAAATGATCAGCTTGAAAGTTTT-GAATGCAATGTT
AGGGAGTACTATAAAGTAGAGCATATATGTGATAGAAGTGTTCTGATCTATGGAACATATTTATTTGGCAGCAGTAGATG
CTTCCACATAT----TTCAAGGTTTTTAATATTTGTGA---TTTTTCCCTGTTACAAGTTTCTAATAAATATCCTCGCAA
AAAAAAGTTTCT--------------------------------------------------------------------
-------------------------------------------------------------AATAAATAGAAGATGGCCA
CTTTC-TCAAAATTTTCATTTGTCCCAAAGTGGTCGGATCCTTCCCTTGACCCTGCGCAAGCGGGAGCTACATGCACCGG
GCTGCCCTTTAGCTTCTGCTAAAAATTTCTAGCAAGTATAGAAGGGCGGAACTTTCAACAAAGATAT-------------
----------------------GAGAACATCAGAGCACTCC-------TTGACACCCCTTCATTCCAAATTTCTCAACTT
GCTCTGC-TTTGACTTCAAAAACTGTCTCACTGAAAGATGCACTTTGTATTGGTTAGTGCGGGTTCATTAAAGATCAGAC
GGACCATAACCATGG--------TTCCAACTGTGAAGATGAGACCATCACAATGCTAACTGTCATC-AAATGCATCACCT
ACATTCCCTGCAAAATAAAAATAAAAAT--------GCACGACCTACATGTGCAGTAAAACAGAAGGAAAATGCAGAATC
CATGACCTAGCTCAGCATCAAGCACATACAAACATATCTAGTTATATGCATATAAAAATCAGTATTTTCTTGGTCAGCAG
ATCACAAAAAGGACACAAACGGTAGGTTCCATCTAGTCAGGGGGTTAGGTTAGGGACACCATGTGGATGAGGCAATCTTA
ATTCTCGGCCACACCAAGATTGTTTGGTGCTCGGCAGCACTAATGCCCAATATATTACCTAACCGAGCCATCCAAATGCT
ACATAGAGTTAATCCTCCTGTAGACCTGAACCCCCTTCATGAGCAGCCCCATGGAGGAAGCTCACCTTGGCATGCCGT--
-CGACGACGGCCTTCTTCCCGCTGGCAGGGCTCCACAAGTTCATGGCCGTCTTCCTCGTGTTCCTCTCGTGGATCCTGGT
CCACTGGTGGAGCCTGAGGAAGCAGAAGGGGCCACGGTCATGGCCGGTCATCGGCGCGACGCTGGAGCAGCTGAGGAACT
ACTACCGGATGCACGACTGGCTCGTGGAGTACCTGTCCAAGCACCGGACGGTCACCGTCGACATGCCCTTCACCTCCTAC
ACCTACATCGCCGACCCGGTGAACGTCGAGCACGTGCTCAAGACCAACTTCAACAATTACCCCAAGGTGAAACAATCCTC
GAGATGTCAGT----------------CAAGGTTCAGTATAATCGGTACTGACAGTGTTACAAATGTCTGAAATCTGGAA
TTGTGTGTGTAGGGGGAGGTGTACAGGTCCTACATGGACGTGCTGCTCGGCGACGGCATATTCAACGCCGACGGCGAGCT
CTGGAGGAAGCAGAGGAAGACGGCGAGCTTCGAGTTCGCTTCCAAGAACTTGAGAGACTTCAGCACGATCGTGTTCAGGG
AGTACTCCCTGAAGCTGTCCAGCATCCTGAGCCAGGCTTGCAAGGCAGGCAAAGTTGTGGACATGCAGGTAACTGAACTC
TTTCCCTTGGTCATATGAACGTTGATTTCTTGGACAAAATCTCAAGATTCTGACGCGAGCGAGCCAATTCAGGAGCTGTA
CATGAGGATGACGCTGGACTCGATCTGCAAGGTGGGGTTCGGGGTGGAGATCGGCACGCTGTCGCCGGAGCTGCCGGAGA
ACAGCTTCGCGCAGGCCTTCGACGCCGCCAACATCATCGTGACGCTGCGGTTCATCGACCCGCTGTGGCGCGTGAAGAAA
TTCCTGCACGTCGGCTCGGAGGCGCTGCTGGAGCAGAGCATCAAGCTCGTCGACGAGTTCACCTACAGCGTCATCCGCCG
GCGCAAGGCCGAGATCGTGCAAGCCCGGGCCAGCGGCAAGCAGGAGAAGGTGCGTACGTGGTCATCGTCATTCGTCAAGC
TCCCGATCGCTGGTTTGTGCAGATGCCACTGATCACTGACACATTAACTGGGCGCGCAGATCAAGCACGACATACTGTCG
CGGTTCATCGAGCTGGGCGAGGCCGGCGGCGACGACGGCGGCAGCCTGTTCGGGGACGACAAGGGCCTCCGCGACGTGGT
GCTCAACTTCGTCATCGCCGGGCGGGACACGACGGCCACGACGCTCTCCTGGTTCACCTACATGGCCATGACGCACCCGG
CCGTGGCCGAGAAGCTCCGCCGCGAGCTGGCCGCCTTCGAGTCCGAGCGCGCCCGCGAGGATGGCGTCGCTCTGGTCCCC
TGCAGCG------ACGGCGAGGGCTCCGACGAGGCCTTCGCCGCCCGCGTGGCGCAGTTCGCGGGACTCCTGAGCTACGA
CGGGCTCGGGAAGCTGGTGTACCTCCACGCGTGCGTGACGGAGACGCTCCGCCTGTACCCGGCGGTGCCGCAGGACCCCA
AGGGCATCGCGGAGGACGACGTGCTCCCGGACGGCACCAAGGTGCGCGCCGGCGGGATGGTGACGTACGTGCCCTACTCC
ATGGGGCGGATGGAGTACAACTGGGGCCCCGACGCCGCCAGCTTCCGGCCAGAGCGGTGGATCGGCGACGACGGCGCCTT
CCGCAACGCGTCGCCGTTCAAGTTCACGGCGTTCCAGGCGGGGCCGCGGATCTGCCTGGGCAAGGACTCGGCGTACCTGC
AGATGAAGATGGCGCTGGCCATCCTGTGCAGGTTCTTCAGGTTCGAGCTCGTGGAGGGCCACCCCGTCAAGTACCGCATG
ATGACCATCCTCTCCATGGCGCACGGCCTCAAGGTCCGCGTCTCCAGGGTGCCGCTCGCCTGATCTTGATCTGGTTCCGG
CGACGGTGAT------GGACGCTCCGGTGGCTGTCTGGCCAGACGGCCGGCGTGTTATGACAGGCTCGATTTAACTTAGC
AATTGTGATAAACTCGTATATGTAGGCAGAGTGGAGAGTGTGTTGATCGATTTGCCATGGACGTTGCTCGTCCGTTGTTA
CCGTCGTACCATGTTTGTATTGCTTCTAGATCA--TTATAGTTCGTGTTTGTTCTTGAGCCTAAGTATTTATTGCACATT
TCAAAAATGACAAATGTGTGCAATTGTCTTTTTTGGGTGTTTTCTAAGGGTAGTATTTTCGCAGATTTATTCTGTCGACC
AAACCTTAGCC---------------------------------------------------------------------
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>chr4D_2
-TGTTTGGTTATTCTTTCATTGTTTGCCATGGAGACATGAATTATCTTCATCTGACCCTTGTCAAATTTGAAGTGATCTT
CATTAGTTGTACATCATCCGCAACTGCTACTGTAGTACCAACAGAAAACGGTCAGCTTGAAAGTTTCGGAATGCAATGTT
AGGGAGTACTATTAAGTAGAGCATATATG-GATAGAAGTGTTCTGATCTGCGCAACATATTTATTTGGCAGCATTAGATG
CTTCCACATATGCTCTGCAAGGTTTCCAATGTTTGTGATTTTTTTTCCCTGTTACAAGTTTCTACTCCCTCCGTTCCTAA
ATATAAGTCTTTGTAGAGATTTCACTATGAACCACATACGGATGTATATAAATGCATTTTAGAAGTAGATTCACTCATTT
TGCTCCATATGTAGTCCATAGTGAAACCTCTACAAAGACTTGTATTTAGGACGGATGGAGCAATAAATAGAAGGTGATCA
TTTTCATCAAAAATTTCATTTG----------------------------------------------------------
--------TTTGGTCCTGTTAAAAAATTCTAATTAATATAGAAGGGGGAAACTTTCAACAATATTTTCCATCTTTGTGAT
TTTCAGGCTTTTTCCATTTAGGGAGAACATCAGAGCACCCC-------TTGACACCCCTTCATTCCAAATTTCTCAACTT
GCTCTGCTTTTGACTTCAAAAACT------------------------ATTGGTTAGTGCGGGTTCATTAAAGATCAGAT
GGACCATAACCATGG--------CTCCAACTGTGAAGATGAGATCATCACAGTGCTAATTGTCAAAAAAATGCATCACCT
ACATCCCCCGCAAAAG-AAAATAAAAAT--------GCATCACCTACATGTACAGTA-----------------------
----------------------------------------------------------------TTTTCTTGGTCAGCAG
ATCACAAAAAGGACACAAACGGTAGGTTCCATCTAGTCAGGGGGTTAGGTTAGGGACACCATGTGGATGAGGCAATCTTA
ATTCTCGGCCACACCAAGATTGTTTGGTGCTCGGCAGCACTAATGCCCAATATATTACCTAACCGAGCCATCCAAATGCT
ACATACAGTTAATCCTCCTGTAGA-CTGAACCCCCTTCATGAGCAGCCCCATGGAGGAAGCTCACGGCGGCATGCCGT--
-CGACGACGGCCTTCTTCCCGCTGGCAGGGCTCCACAAGTTCATGGCCATCTTCCTCGTGTTCCTCTCGTGGATCTTGGT
CCACTGGTGGAGCCTGAGGAAGCAGAAGGGGCCGAGGTCATGGCCGGTCATCGGCGCGACGCTGGAGCAGCTGAGGAACT
ACTACCGGATGCACGACTGGCTCGTGGAGTACCTGTCCAAGCACCGGACGGTGACCGTCGACATGCCCTTCACCTCCTAC
ACCTACATCGCCGACCCGGTGAACGTCGAGCATGTGCTCAAGACCAACTTCAACAATTACCCCAAGGTGAAACAATCCTC
GAGATGTCAGT----------------AAAGGTTCAGTATAATCGGTACTGACAGTGTTACAAATGTCTGAAATCTGAAA
TTGTATGTGTAGGGGGAGGTGTACAGGTCCTACATGGACGTGCTGCTCGGCGACGGCATATTCAACGCCGACGGCGAGCT
CTGGAGGAAGCAGAGGAAGACGGCGAGCTTCGAGTTCGCTTCCAAGAACTTGAGAGACTTCAGCACGATCGTGTTCAGGG
AGTACTCCCTGAAGCTGTCCAGCATACTGAGCCAGGCTTGCAAGGCCGGCAAAGTTGTGGACATGCAGGTAACTGAACTC
ATTCCCTTGGTCATCTGAACGTTGATTTCTTGGACAAAATTTCAAGATTCTGACGCGAGCGAGCGAATTCAGGAGCTGTA
TATGAGGATGACGCTGGACTCGATCTGCAAAGTGGGGTTCGGAGTCGAGATCGGCACGCTGTCGCCGGAGCTGCCGGAGA
ACAGCTTCGCGCAGGCGTTCGACGCCGCCAACATCATCGTGACGCTGCGGTTCATCGACCCGCTGTGGCGCGTGAAGAAG
TTCCTGCACGTCGGCTCGGAGGCGCTGCTGGAGCAGAGCATCAAGCTCGTCGACGAGTTCACCTACAGCGTCATCCGCCG
GCGCAAGGCCGAGATCGTGCAGGCCCGGGCCAGCGGCAAGCAGGAGAAGGTGCGTGCGTGGTCATCGTCATTCGTCAAGC
TCCCGGTCGCTGGTTTGTGTAGATGCCATGGATCACTGACACACTAACTGGGCGCGCAGATCAAGCACGACATACTGTCG
CGGTTCATCGAGCTGGGCGAGGCCGGCGGCGACGACGGCGGCAGTCTGTTCGGGGACGACAAGGGCCTCCGCGACGTGGT
GCTCAACTTCGTGATCGCCGGGCGGGACACCACGGCCACGACGCTGTCCTGGTTCACCTACATGGCCATGACGCACCCGG
ACGTGGCCGAGAAGCTCCGCCGCGAGCTGGCCGCCTTCGAGGCGGAGCGCGCCCGCGAGGATGGCGTCGCTCTGGTCCCC
TGCGGCG------ACGGCGAGGGCTCCGACGAGGCCTTCGCTGCCCGCGTGGCGCAGTTCGCGGGGTTCCTGAGCTACGA
CGGCCTCGGGAAGCTGGTGTACCTCCACGCGTGCGTGACGGAGACGCTGCGCCTGTACCCGGCGGTGCCGCAGGACCCCA
AGGGCATCGCGGAGGACGACGTGCTCCCGGACGGCACCAAGGTGCGCGCCGGCGGGATGGTGACGTACGTGCCCTACTCC
ATGGGGCGGATGGAGTACAACTGGGGCCCCGACGCCGCCAGCTTCCGGCCGGAGCGGTGGATCGGCGACGACGGCGCCTT
CCGCAACGCGTCGCCGTTCAAGTTCACGGCGTTCCAGGCGGGGCCGCGGATTTGCCTCGGCAAGGACTCGGCGTACCTGC
AGATGAAGATGGCGCTGGCAATCCTGTGCAGGTTCTTCAGGTTCGAGCTCGTGGAGGGCCACCCCGTCAAGTACCGCATG
ATGACCATCCTCTCCATGGCGCACGGCCTCAAGGTCCGCGTCTCCAGGGCGCCGCTCGCCTGATCTTGATCTGGTTCCGG
CGACGGTGATGGACCTGGACGCTCCGGTGGCTGGCTGGCCGGACGGCCGGCGCGTTATGACACGCTCGATTTAACTTGGC
AACTGTGATAAACTCGTATATGTAGGCAGAGTGGAGAGGGTATTGATCGATTTGCCATTGACGTTGCCCTACTCCATGG-
----------ATGTTTGTATTGCCTCTAGATCA--TTATAGTTCGTGTTTGTTCTTGAGCCTAAGTATTTATTGCACATT
TCAAAA-TGACAAATGTATGCAATTGTCTTTTCTGGATGTTTTCTAAGG-----ATTTTCGTAGATTTATTTTGTCGATC
AAACCCTAGCCGTCACACATGATTCGATCCCTCT----------------------------------------------
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>SNPs
S----S--------------------------------------------------S-----------S-----------
----------------------S----------------------------S----------------------------
-------------S--------------S-----S---------S----------------------------S------
-S--SS-----------------------------S---S----S-SSS-S-----------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-S------------------------------------------------------------
---------------------S-----------------------------------S---S-----SS--S--------
-----------------------------------------SSSSSSS-----------------S--------------
-S------------------------S----------------------------------------S------S-----
---------------SSSSSSSS------------------S--S-------S-----------------S---------
---------------S-S----------SSSSSSSS-------------S--S---------------------------
------------S----S-----------S------S----------------------S---S----------------
---------------------------------------------------------S----------------------
-----------------------------------SS-------------------------------------------
-------S-----------------SSS-S--S-S-S-----------------------------S-----------SS
S----------S--------------------------------------------------------------------
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-------------------------------------------------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-SSS-SSSSSSSS---SSSS----------------------
-----S-----------------------------------------------------S--------------------
-------------------------------------------------S----------S-------------------
-----------------SS------------------------------------S-----------------S------
-S------------------S-----------------------------------------------------------
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------------------------------------------------------------S--S----------------
---S------------------S-----------------------S-----S---------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S-----------------------S---------
-------SSSSSS-------S-----------------------------------------------S-----------
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-----------------------------------------------------------------------------S--
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---------------------------------------------------------------------S----------
-------------------------------------------------------------------------S------
----------------------------------------------------S---------------------------
--S------------------------------SS---------------------------------------------
------S--------------------------S----------------------------------------------
-------S--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_896
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----------------------------------------------------------------------------ACCT
ACATCCCCCGCAAAAC----------------------------------------------------------------
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>reverse_1914
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-------------------------------------------------------------------------CGAACTC
AGTCCCTTGGTCA-------------------------------------------------------------------
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>forward_1618
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------------------------------------------------------------------------------GA
ACCCCTCAGCCTTGTGAA--------------------------------------------------------------
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>reverse_3528
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-------GGCCGTCACACATGATTCGA-----------------------------------------------------
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