>input_sequence_40942
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------------------------------ATGGGGCGTGGGAAAGTGGAGCTCAAGAAGATCGAGAACACGACGAGCCG
CCAGGTCACCTTCTCCAAGAGGCGGATGGGCCTGCTCAAGAAGGCAAACGAGCTGGCCATTCTTTGCGATGCGCAGGTTG
GGGTGATCGTCTTCTCCGGCAGTGGCAAGATGTACGAGTACGCCAGCCCTCCATGGAGGTGAGTAAAACATCTCTGCACA
CCAGTTCAACCACTGCATATTTCTCTGCAATTTGATCTTTCTCTGCTCCTCTTGGCTTGAGGGGAAATGGAAATTTTGGA
TATTGTTTAGGTCGCACAATGTTGTCCTATAGCTTCCATGACGTTCTTTGTGTGTTCAGTTAGTCTTCTGCAGTTTTTCT
CAGTGTGTACAC-TTTCTTC--TGAACTTTTTGTTGGGAACTTCCAACTTCTCTTGTTGATAATCTGCACGTTTTTAGTA
ATGAAGTCAAGATCAATTTAAAAGTATACGAAGAACCGACGATGATCAAGTATGCCCTGCCTGTTTTCTTTTCCTTTTTG
TGCGTGGCAGGACTGCAAACACCAGTTCAACTACTGCATGTCCTCTGCAATCCGATCTTTCTCTGCTCCTCTTGGCTTGA
GGGGAAATGGAAATTTTGGATACTTTCCAGGTCCCATAATGTTTGTTCTAGAGTTGTCATGACGTTCTTTTGTATGTTCA
GTTAGTCTTGTGCAGTTTTTCTCAATGTGTATACTTCCTGTTGAACTTTTTGTTGGGAACTTCCAACTTCTGTTGTTGCT
GATCTGCACGTTTTAGTAATGAAGTCAAGATCAATTTGAAAGTATATGAAGAACCGATGATGATCAACTAAGCCCTGACT
GTTTTTTGTTCTCCATTTTGTGTGTGGCAGGATTGCAAACATCTTTGACAGATACCTGAAAGCCCCCAGCACCCGCTTTG
ATGAGATGGACGTCCAGCAGGTACACCAGTTTAGGCTAAATCAATTAACATTGTTAATT--TTTTTCTGGTTTTAGCTAA
TAATCTTCCATTATTTTTGATGAAGAAAATCATCCATGAGATGACAAGGATGAAGGATGAGAGCAACAGGCTGAAGATCA
TCATGAGGCAGTACATGGGCGAGGACCTGGGCTCGCTGACCCTGCAAGACGTGAGCAATCTTGAGCAGCAGATCGAGTTC
TCGCTGTACAAGGTTCGCCTTAGGAAGGTAACCACCCAGCAACACGATGCAACAGTTCTATATTTTCTTTTACTCAG--A
TATGAAACTCTGCATTCCTCTGTGCCCAGTGCTAATGCCCTAATTTAATTTGTCGCAGCAGCAGCTACTTGACCAGCAGC
TGCTCGAGATGCGCCAGAGGGTATGCGAGACAAGATGCATTGATTTGTCCGGCATTCCTGCCATCCTTTATCAGAACTCT
TTCTTTTTTGTGTGTGTG-GTAAAGAGTTGAGTTTTGATGGAGTTCTGTGGATTTAATTCTGAATACAGGAGATGCACAT
GTCAGAGGACCAGAGCAGCAGCTACATGTTCCACATGGTAACACATCTCAGCTTAATTTCTCCTTGTCAGGTGATTTTGT
GCTGCAATTTACTCACCCTTGATGAATTTGCTTGTGTTTGTCAAAAAAAGAATCCGGCGAGGGATCAGCCGGGCCAGTCG
GCCGACGTGATGAATCCGAAGCTGTTCCCTCTGTGGGACGTCGGCGACCAGATCTACGGCCAGGACGCCGAGTCCTCCAT
GACGGCTCTCAAGCTCTCGCCGCAGCTGCAGGAGTACAAGCTCCAGCCGGTGCAGCCCAACCTGCAGGAGGGCAACCTCC
ATGGCTACGTCCTCCGCCTCTGGTAAGCATCGTATGCAACTGA-----GCGTCACTGGAATTCGTGTACATCGGTCATGA
TCATCTACGGGCAAGTTCATCAGCT-TGACCAGTTTCA------TCTATCTGCAGA------------------------
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>chr2A_1_TraesCS2A01G422400
TAGGTGCAGCGTGGAGTGGACCAAGGGCCACCTAATGGAAAGCATTATTGCAGCGAGTTATTCCCTGCCTTGGCCAGTTC
TAGGTCGGTCTTCTTACAGGAG--------------------CCTCCCTTGCCATGTCCGGTAAGAGGCGGTTACCAGTC
CACAGCACCCACATTTCCGGCCATCTGGTACCCTCTCTCATGCACACTGAAACTCACACTTTGCACTTGATCAACACGCA
TTATTAATCTTGTGCTGCATTGTTTGAGATGCTCGTCCTAATGGTGCTAATTTGAGGGCACACATTAGCGCGATTTGCGG
ATAGATGTCTGTGGTCA------------ACAATAATAGTCTGTTTGTGCATGCCATTGGATTTAGGGC-----------
AGAAAGTTTAAGTTGGCCACATTGCTTGATTTAATCGTTCTCTTTTCCTTATTGCATGAAATGTTTATTTGCTGTACTAG
CATATAGCGGGACAGCCTGACAAGAGACGATGAGAATATTAGTAGTCTTTGAGGCTTGAAACAAGAAGTTTCCAGACTTA
TAAAAGGTTCCCCTGGCCCCTTTGCTA-CCCCATCCACCTTCTGAAGAAGCACACGCAGCCACAGCCTACACAGGTAATG
CCTCTCCT--------------CTCTCTTGCTCTGCAGCACACACTCTCTGCAAGAACATGTCTTGCAAATGCTACTCTT
TTACTCTTCACAGCATACAGTTTCTCCTGTCTATGCATACAGTTTTCTCTGCCTCATCTCATGCATTTGAAGCCATTTGA
TCTGCGTGGTGCTTGGATTCGACTTTAACATTGTGGAGCTTGGAAGAAGTCGTTCTTTTATGATAATACCTTTGCTTCTG
AACTCTTGCTTTTGAAACCATCTGCTTTATCTTACTTCCTGCACTTGAAGCCATTCGGTGCATCTCTACTCTGCATTTGA
AGCCATTTACTTGATTCTCATCTTGGATGAACGT-----AGGCACCATGATTTGACGAGCTCTTTATGGTT-------TA
GGAGGAGAAGAGATCCACTGAGCTGCAGCAATGGGGCGTGGGAAAGTGGAGCTCAAGAAGATCGAGAACACGACGAGCCG
CCAGGTCACCTTCTCCAAGAGGCGGATGGGCCTGCTCAAGAAGGCAAACGAGCTGGCCATTCTTTGCGATGCGCAGGTTG
GGGTGATCGTCTTCTCCGGCAGTGGCAAGATGTACGAGTACGCCAGCCCTCCATGGAGGTGAGTAAAACATCTCTGCACA
CCAGTTCAACCACTGCATATTTCTCTGCAATTTGATCTTTCTCTGCTCCTCTTGGCTTGAGGGGAAATGGAAATTTTGGA
TATTGTTTAGGTCGCACAATGTTGTCCTATAGCTTCCATGACGTTCTTTGTGTGTTCAGTTAGTCTTCTGCAGTTTTTCT
CAGTGTGTACAC-TTTCTTC--TGAACTTTTTGTTGGGAACTTCCAACTTCTCTTGTTGATAATCTGCACGTTTTTAGTA
ATGAAGTCAAGATCAATTTAAAAGTATACGAAGAACCGACGATGATCAAGTATGCCCTGCCTGTTTTCTTTTCCTTTTTG
TGCGTGGCAGGACTGCAAACACCAGTTCAACTACTGCATGTCCTCTGCAATCCGATCTTTCTCTGCTCCTCTTGGCTTGA
GGGGAAATGGAAATTTTGGATACTTTCCAGGTCCCATAATGTTTGTTCTAGAGTTGTCATGACGTTCTTTTGTATGTTCA
GTTAGTCTTGTGCAGTTTTTCTCAATGTGTATACTTCCTGTTGAACTTTTTGTTGGGAACTTCCAACTTCTGTTGTTGCT
GATCTGCACGTTTTAGTAATGAAGTCAAGATCAATTTGAAAGTATATGAAGAACCGATGATGATCAACTAAGCCCTGACT
GTTTTTTGTTCTCCATTTTGTGTGTGGCAGGATTGCAAACATCTTTGACAGATACCTGAAAGCCCCCAGCACCCGCTTTG
ATGAGATGGACGTCCAGCAGGTACACCAGTTTAGGCTAAATCAATTAACATTGTTAATT--TTTTTCTGGTTTTAGCTAA
TAATCTTCCATTATTTTTGATGAAGAAAATCATCCATGAGATGACAAGGATGAAGGATGAGAGCAACAGGCTGAAGATCA
TCATGAGGCAGTACATGGGCGAGGACCTGGGCTCGCTGACCCTGCAAGACGTGAGCAATCTTGAGCAGCAGATCGAGTTC
TCGCTGTACAAGGTTCGCCTTAGGAAGGTAACCACCCAGCAACACGATGCAACAGTTCTATATTTTCTTTTACTCAG--A
TATGAAACTCTGCATTCCTCTGTGCCCAGTGCTAATGCCCTAATTTAATTTGTCGCAGCAGCAGCTACTTGACCAGCAGC
TGCTCGAGATGCGCCAGAGGGTATGCGAGACAAGATGCATTGATTTGTCCGGCATTCCTGCCATCCTTTATCAGAACTCT
TTCTTTTTTGTGTGTGTG-GTAAAGAGTTGAGTTTTGATGGAGTTCTGTGGATTTAATTCTGAATACAGGAGATGCACAT
GTCAGAGGACCAGAGCAGCAGCTACATGTTCCACATGGTAACACATCTCAGCTTAATTTCTCCTTGTCAGGTGATTTTGT
GCTGCAATTTACTCACCCTTGATGAATTTGCTTGTGTTTGTCAAAAAAAGAATCCGGCGAGGGATCAGCCGGGCCAGTCG
GCCGACGTGATGAATCCGAAGCTGTTCCCTCTGTGGGACGTCGGCGACCAGATCTACGGCCAGGACGCCGAGTCCTCCAT
GACGGCTCTCAAGCTCTCGCCGCAGCTGCAGGAGTACAAGCTCCAGCCGGTGCAGCCCAACCTGCAGGAGGGCAACCTCC
ATGGCTACGTCCTCCGCCTCTGGTAAGCATCGTATGCAACTGA-----GCGTCACTGGAATTCGTGTACATCGGTCATGA
TCATCTACGGGCAAGTTCATCAGCT-TGACCAGTTTCA------TCTATCTGCAGATTTCAGGACATGCACCATGGACCT
GACAGACACTACTGATGGAGGACGGATGAGCAGAGCTTCCCTGTCTGAATCTGCTCTGGAACGGTGTTCTAATCAGC---
TTACATTAGTATCTTATATACTGCACTGTGTGTATTAACTGCTATTGCGTTCGCTAGATTATGTTTCATGATGCTTGTAA
ATGAGGAGCGTGCCACCTGATTTATGTGCCTTGAGGA---ACTACCTCTGTTTCTGTCAAGAAGATGT-------GTTGT
GAGTGTGACCCGGAGAGGTTATGCCTTGCATTGCTGTTCCCAAAGAAATTTATGGCAAGTAGTACTCTATATTATGATGT
CTGTTTGCTTTTGTGATGCACACTGGGATCGCTGCATTCTTTTGTGTGGAGACATCACGTGAAATTCGGAGAACTGCACT
CAAGCTGCGGCGTGAAAAGAACTATGATGCTGTTATATTTAGTACTGACAGTAATGGCCTTTTTGATCCGCATGATTCCA
AAGCCATAGAAACAAAACAATAAAAACATGGCATTTTATTTTATGGCGTGTCAATTCATATAAAATCTAAATACAAAT--
GACTATGTAACAGACGGCGTTTGGTTGTATCA------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------G
AGAGAGAGAGAGAGAGAGAGCAGGTTTTTCTTTAAGGACCAGTTCTTTGCAACAATTGTCATCGATACAAAGGTAGTTTT
CCATGAGGTTTGACTTAATGAAAAAATTATTTTGAAAAGTATAGTCAACAGAGAAAAATTGTATAAGTTATAATCTTAAA
ATCAAACGAGCTCCGCAA------------------------CAAATCAAATGATGTTCCTTTCAGTCAAATAGTTCCTT
GCAGAAATTTGGTTGCAAGCTTTCTAAAC--TGTCATTGTTGTGTGACCAGATGCAAATCACTCTCAAAAGAGTCATTTC
TGAGACTAACATAGTTGCCATCACACAGGTTAGACAAAGAAATACATCTTTATAAATTAAAACAAGCTAAGGGCAACTCC
AACGTGGATCATCAAAACCGACCT
>chr2D_1
TAGGTGCAGTGTGGAGTGGACCAAGGGCCACCTTATGGAAAGCATTATTGCACCGAGTTATTCCCTGCCTTGGCCAGTTC
TAGGTCGGTCTTCTTACAGGAGTAGCCTGGATGCAAGCCTCACCTCCCTTGCCATGTCCAGTAAGAGGCGGTTACCAGTC
CACAGCACCCACATTTCCGGCCATCTGGTACCGTCTCTCATGCACACTGAAACTCACACTTTGCACTTCATCAACACGCA
TTATTAATCTTGTGCTGCATTGTTTGAGATGCCCGCCCTAATGGTGCTAATTTGAGGGCACACATTAGCGCGATTTACGG
GTAGATTCCGTGGGCTGTGCATACATGCCACAATAATAGTCTCCTTGTGCAGGGTATTTGATTTAGGGCATAAACTGCAG
---GAGGTTAAGTTGGCCACATTGCCTGATTTAATTATTCTCTTTTCCTTATTGTGTGAAATGTTTATTTGCTGCATCAG
TATATAGTGGGACAGCCTGACAAGAGACGATGAGAATATTAGTAGTCTTTGAGGCATGAAACAAGAACTTTCCAGACTTA
TAAAAGGTTCCCCTGGCCCCTTTGCTCTCCCCCTCCATCTTCTGAAGAAGCACACGCAGTC--------CACAGGTAATG
CCTCTCCTCTTTGGACTTCTACCTCTCTTGCTCTGCAGCACACACTCTCTGCAAGAACATGTCTTGCAAATGCTACTCTT
TTACTCTTCACAGCATATGGTTTCTCCTGTCTATGCATACAGTTTTCTGTGCCGCATCTCATGCATTTGAAGCCATTTGA
TGTGCGTGGTGCTTGGATTCGACTTTAACATTGTGGAGCTTGGAAGAAGTAGTTTCTTTTATGACATACCTTTGCTTCTG
TACTCTTGCTTTTCAAACCATCTGCTTGACCTTGCTTCCTGCACTTGAAGCCATTCGGTGCATCTCTACTCTGCATTTGA
AGCCATTTACTTGATTCTCATCCTGGATGAACGTAGCGTAGGCATCATGATTTGACGAGCTCTCTCTGGTTTGTTGCATA
GGAGGAGAAGAGATCCACTGAGCTGAAGCAATGGGGCGTGGGAAAGTGGAGCTCAAGAAGATCGAGAACACGACGAGCAG
GCAGGTCACCTTCTCCAAGAGGCGGATGGGGCTGCTCAAGAAGGCAAACGAGCTGGCCATTCTTTGTGATGCGCAGGTTG
GGGTGATCGTATTCTCCGGCAGTGGCAAGATGTACGAGTACGCCAGCCCTCCATGGAGGTGAGTAAAACATCTCTGCACA
CCAGTTCAACCACTGCATATTTCTCTGAAATTTGATCTTTCTCTGCTCCTCTTGGCTTGAGGGGAAATGGGTATTTTTGA
TATTGTTGAGGTCTCATAATGTTGTTCTAGGGTTGTCAGA--------------TTCAGTTAGTCT--TGCAGTTTTTCT
CAATGTGTATAG-TTTTTTTTTTGAACTTTTTGTTGGGAACTTCCAACTCCTGTTGTTGATAATCTGCACG-TTTTAGTA
ATGAAGTCAAGATGAATTTAAAAGTATACGAAGAACCGACGATGATCAAGTATGCCCTGCCTGTTTTCTTTTCCTTTTTG
TGTGTGGCAGGACCGCAAACACCAGTTCAATTACTGCGTGTTCTCTGCAATCCGATCTTTCTCTGCTCCTCTTGGCTTGA
GGGGAAATGGAAATTTTGGATACTGTTCAGGTCCCATAATGTTTGTTATAGAGTTGTCATGACGTTCTTTTGTACGTCCA
GTTAGTCTTCTGCAGTTTTTCTCAATGTGTATACTTCCTGTTGAACTTTTTGTTGGGAACTTCCAACTTCTCTTGTTGCT
AATCTGAACGTTTTAGTAATGAAATCAAGATCAATTTGAAAGTATGTGAAGAACAGCTGATGATCAACTAAGCCCCGCCT
GTTTTTTCTTCTCCTTTTTGTGTGTGGCAGGATTGCAAACATCTTTGACAGGTACCTGAAAGCCCCCAGCACCCGCTTTG
ATGAGATGGACGTCCAGCAGGTACACCAGTTTAGGTCAAACCAATTAACATCGTTAG-T--TTCTACTGGTTTTACCTAA
TAATCTTCTTTTCTTTTCGATGAAGAAAATCATCCATGAGATGACAAGGATGAAGGACGAGAGCAACAGGCTGAAGATCA
TCATGAGGCAGTACATGGGCGAGGACCTGGGCTCGCTGACCCTGCAAGACGTGAGCAATCTTGAGCAGCAGATCGAGTTC
TCCCTCTACAAAGTTCGCCTTAGGAAGGTAACCACCCAGCAACACGATGCAACAGTTCTATAGGTTCTTTTATTACTCTA
TATGAAACTCTGCATTCCTCCGTGCCCAGTGCTAATGCCCTAATTTAATTTGTTGCAGCAACAGCTACTTGACCAGCAGC
TGCTGGAGATGCGCCAGAGGGTATGCGAAACACGATGCATTGATTTGTCCAGCATTCCTGACATCCTTTATCACACCCTT
TTTCTTTTCTTTTCTTTTTGTAAATAGTTGTTTTTTGATGGAGTTTTGTGGATTTCATTGTG---ACAGGAGATGCACAT
GTCAGAGGACCAGGGCAGCAGCTACATGTTCCACATGGTAACACATCTCAGCTTAATTTCTCTTGAGATGCTTTC---GT
GTTGCAATTTATTCACCCTTGATGAATTTGTTTGTGTCTGTCAAAAAAAGAATCCGGCGAGGGATCAGCCGGGCCAGCCG
GCCGACGTGATGAACCCGAAGCTGTTCCCTCTGTGGGACGTGGGCGACCAGATCTACGGCCAGGACGCCGAGTCCTCCAT
GACGGCTCTCAAGCTCTCGCCGCAGCTGCAGGAGTACAAGCTCCAGCCGGTGCAGCCCAACCTGCAGGAGGGCAACCTCC
ATGGCTACGTCCTCCGCCTCTGGTAAGCATCGTATATCATATGCGGGGGCGTCATTGGAATCCGTG--------------
---------CGCAAGTTCGTCTGACCTGACCAGCTGCATCCGTCTCTGCCTGCAGATTTCGGGGCATGCGCGATGGACCT
GACAGACGCTACTGATGGAGGAT-GATGAGCAGAGCTTCCCAGTCTGAATCTGCTCTGGAACGGCGTTCTAACCAGCTTA
TTACATTATCTTACTGCATTATGTGGG----GTATTAACTGCTATTGCGTTTGCTAGATTACGTTTCATGATGCTTGTAA
ATGAGGAGTGTGCCACCTGATTTGTGTGCCTTGAGGAACTACTACCTCTGTTTCTGTCAAGAAGATGT-------GTTGT
GA------CCCGGAGTGGTTATGCCCTGCATTGCTGTTCCCAAAGAAATCTGTGGCAAGTAGTACCCTATATTATGATGT
CTGTTTGCTTTTGTGATGCACACTGCGATTGCTGCATTCTTTTGTGTGGAGACATCATGTGAAATTCGTAGAATTGCACT
CAAGCTGCAGCGTGAAAAGAAATATGAT---------------------------------------CCGCATGATTCCA
AAGTCGTAGTAACAAACAAGAAAATGGA----ATTTTATTTTATGGCGAGTCGATTCATAGAAAATCTAAATCCTTATTC
GAATATGTAATAGACGCTGTTTGGTTGAATGTGGCGTGCAAAAAATAAAATAAAATATATTTAAAAGTTTCAAAAAATGT
CATCTTTTCTCTATAAATACATATGCATATTCTTCAAGTATGTATAAAATTTCGTCAACTAATTTTATTATTTGCATGCT
ACACAAAAAAGACAAATATCTGACATAAATACTACAAAGAAAAAGCCTATTTTAATCTGTGTATTTGTCTTTTTTTGTGT
GCATCACATATGAATATATATGTTCATGAAATTTTATACATGTATGCTACAAGTATATGTCTACATGAAAACTTTTTTTC
AGATTATTCCGAGATGTGAAAAAGGTATTTTTGCTGAAAATAATAATAAAGAGCTCAATGGAGCTTGGCCTCTGCAGGCA
CTTTTTGCTGCTGAAAATAATAATAAAGAGCTCAATAGAGCTTGGCCTCTGCAGGCACTTTTCGCTGTTTGGTTGTACTG
AGAGAGAGAGAGAGAG------------------------------------------------------------TTTT
CCATGAGGTTCGGCTTAATGT-----TTTTTTTGGAAAGTATAGTCAACAAAAAATAAATGCATAAGTTATAATCTTAAA
ACCAAACAAGCTCCGCAATAATGGTTCGAATAAGAATCCTTCCAAGTCATGTGATGTTCCTTTCAATCAAATAGTTCCTT
ACAGAAATTTAGTTGCAAGCTTTCTAAAAATTGTCATAGTTGTGTGACCAGATGCAAATCAGTCTCAAAAGAGTTATTTC
TGAGATTAACATAGTTTCCACCACACAGGTTAGACAAAGAAGTGCATCATTATAAATTAAAACAAGATAAAGGCAACTCC
AACGTGGATCATCAAAACCGACCT
>chr2B_1
TAGGTGCAGTGTGGAGTGGACCAAGGGCCACCTTATGGAAAGCATTATTGCACCGAGTTATTCCCTGCCTTGGCCAGTTC
TAGGTCGGTCTTCTTACAGGAGTAGCCTGGATGCAAGGCGCACCTCCCTTGCCATGTCCAGTAAGAGGCGGTTACCAGTC
CACAGCACCCACATTTCCGGCCATCTGGTACCGTCTCCTATGCACACTGAAGCTCACACTTTGCACTTCATCAACTCGCA
TTATTAATCTTGTGCTGCATTGTTTGAGATGCTCGCCCTAATGGTGCTAATTTGAGGGCACAGG-TAGCGCATTTTATGG
ATAGATGTCTGTGGGCT------------ACAATAATGGTCTGTTTGTGCATGCTATCTGATTTGGGGCAATTACATTGC
AGAGAGTTTAATTTGGCTACATTGCTTGATGTAATTGCTCTCTTTTCCTTAATGCATGAAATGTTTATTTGCTGTACCAG
TATGTAGTGGGACAGCCTGACAGGAGATGACGAGAATATTAGTGGTCTTTGAGGCTTGAAACAAGAACTTTCCAGACTTA
TAAAAGGTTCCCCTGGCCCCTTTGCTCCCCCCCTCCATCTTCTGAAGAAGCACACGCAGTC--------CACAGGTAATG
CCTCTCCTCTTTCGACTCCTACCTCTCTTGCTCTGCAGCACACACTCTCTGCAAGAACATGTCTTGCAAATGCTACTCTT
TTACTCTTCACAGCATATAGTTTCTCATGTCTATGCATACAGTTTTCTCTGCCTCGTCTCATGCATTTGGAGCCATTTGA
TCTGCGTGGTGCTTGGATTCGACTTTAACATTGGAGCTT-----AGAAGTAGTTTCTTTTATGACATATCTTTGCTTCTG
AACTCTTGCTTTTCAAACCATCTGCTTGATCTTACTTCCTGCACTTGAAGCCATTCGGTGCATCTCGACTCTGCATTTGA
AGCCTTTTACTTGATTCTCATCTTGGATGAACGT-----AGGCATCATGATCTGACGAGCTCTTTCTGGTTTATTGCATA
GGAGGAGAAGAGATCCACTGAGCTGCAGCAATGGGGCGTGGGAAAGTGGAGCTCAAGAAGATCGAGAACACGACGAGCCG
CCAGGTCACCTTCTCCAAGAGGCGGATGGGCCTGCTCAAGAAGGCAAATGAGCTGGCCATTCTTTGCGACGCGCAGGTTG
GGGTGATCGTATTCTCCGGCAGTGGCAAGATGTACGAGTACTCCAGCCCTCCATGGAGGTGAGTAAAACATCTCTGCACA
CCAGTTCAACCACTGCATG-TTCTCTGCAATTTGA---TTCTCTGCTCCTCTTGGCTTGAGTGGATATGGATATTC----
--TTGTTTAGGTCTCATAATGTTGTTCTAGAGTTGTCAGA--------------TTCAGTTAGTCT--TGCAGTTTTTCT
CAATGTATACAGTTTTTTTTTTTGAATTTTTTGTTGGGAACTTCCAATTTCTGTTGTTGATAATCTGCACG-TTTTAGTA
ATGAAGTCAAGATCAATTTAAAAGTATACGAAGAACCCACAATGATCAAGTATGCCCTGCCTGTTTCCTTTTCCTTTTTG
TGTGTGGCAGGATTGCAAACACCAGTTTAACTACTGCATGTTCTCTGCAATTTGATTTTTATCTGCTCATCTTGGCTTGA
GGGGAAATGGAAATTTTGGATACTGTTCAGGTCCCATAATGTTTGTTCTAGACTTGTCATGACGTTCTTTTGTATGTACA
GTTAGTCTTGTGCAGTTTTCCTCAATGTGTATACTTCCTGTTGAACTTTTTGTTGGGAACTTCCAACTTTTGTTGTTGAT
AATCCGCACGTTTTAGTAATGAAGTCAAGATCAATTTAAAAGTATACGAGGAACCGATGATGATCAACTAAGCCCTGACT
GTTTTTCGTTCTCCTTTTTGTGTGTGGCAGGATTGCAAACATCTTTGACAGATACCTGAAAGCCCCCAGCACCCGTTTTG
ATGAGATGGACGTCCAGCAGGTACACCAGTTTAGGCTAAATCAATTAATAACATTGTTAAATTTTACTGGTTTTAGCTAA
TAATCTTGCTTTCTTTTTGATGAAGAAAATCATCCATGAGATGACACGGATGAAGGATGAGAGCAACAGGCTGAAGATCA
TCATGAGGCAGTACATGGGTGAGGACCTGGGTTCTCTGACCCTGCAAGACGTGAGCAATCTTGAGCAGCAGATCGAGTTC
TCGCTGTACAAGGTTCGCCTTAGGAAGGTAACCACCCTGCAACACGATGCAACAGTTCTAGG--TTCTTTTACTCCATGA
-ATGGAACTCTACATTCCTCTGTGCCCAGTGCTAATGACCTGATTTAACTTGTTGCAGCAACAGCTGCTTGACCAGCAGC
TGCTCGAGATGCGCCAGAGGGTGTGCGAAACAAGATGCATTGATTTGTCCGGCATTCCTGTCATCCTTTATCACACCCTT
TTTCTTTTCTTTTCTTTTTGCAAATAGTTGATTTTTGATGGAGTTTTGTGGATTTCATTCTG---ACAGGAGATGCACAT
GTCAGAGGACCAGAGCAGCAGCTACATGTTCCACATGGTAACACATCTCAGCTTAATTTCTCCTTGTCAGGTGATTTTGT
GCTGCCGTTTATTCACCCTTGATGAATTTGCTTGTGTCTGTG--AAAAAGAATCTGGCGAGGGATCAGCCGGGCCAGTCG
GCCGACGTGATGAACCCGAAGCTGTTCCCCCTGTGGGACGTCGGCGACCAGATCTACGGGCAGGACGCCGAGTCCTCCAT
GACTGCTCTCAAGCTCTCGCCGCAGCTGCAGGAGTACAAGCTCCAGCCGGTGCAGCCCAACCTGCAGGAGGGCAACCTCC
ATGGCTACGTCCTTCGCCTCTGGTAAGCATCGTACGC--------GGGGCATCATTGATATCCGTG--------------
---------GGCAAGTTCGTCTGACCTGACCAGTTGCATCCGTCTCTGCCTGCAGATCTCAGGACATGCACCATGGACCT
GACAGACACTACTGATGGAGGAT-GATGAGCAGAGCTTCCCTGTCTGAATCTGCTCTGGAACGGTGTTCTAATCAGC---
TTACATTATCTTACTGCGTTATGTGGG----GTATTAACTGCTATTGCGTTTGCTAGATTACGTTTCATGATGCTTGTAA
ATGAGGAGTGTGCCACCTGATTTGTGCACCTTGAGGAACTACTACCTCTGTTTCTGTCAAGAAGATGTGTTGTGAGTTGT
GA------CCCGGAGGGGTTATGCCTTGCATTGCTGTTCCCAAAGAAATTTGTGGCAAGTACTACTCTATATCATGATGT
CTATTTGCTTTTGTGATGCACACTGCGATTGCTGCATTCTTTTGTGTGGAGACATCATGTGAAATTCGGAGAATTGCACT
CAAACTACAGCGTGAAAAAGAAATATAAT---------------------------------------------------
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>SNPs
---------S-----------------------S------------------S---------------------------
-----------------------------------------------------------S--------------------
--------------------------------S-----------------------------------S-----------
-----------------------------------S----------------------------------------S---
--------------S-S-------------------------------------S---S---------------------
---S-------------------------------S-----------------------------------------S--
S------S-----------------------------------------------------------S------------
--------------------------S-----S----S---------------------S-SSSSSSSS-----------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------S---SS---SSSSSS---------------
-------------S-------------S----------------------------------------------------
--------------------------------------------S--------------------S--------------
--------------------------------------------------------------------------------
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----------S---------------------------------------------------------------------
-----------------------------------------------------------------------S-----S--
-------------S--S--------S---S--S-SS--SSSSSSSSSSSSSSSS------------SS------------
--S--------S----S--S--------------------------------S------------------S--------
--------------------------------------------------------------------------------
--S--------------------------------------S--------------------------------------
------------------------S-S--------------------------------------------------S--
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
---------------------------------------------------S----S--------S--------------
---------S--S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------SS-----------SS---
-----------------------------------------------------S------S-------------------
----------------------------S-------------------------------S------------S-S-SS-
--SS----SS-S-S-S-S------S------S-------------S---------S------SSS---------------
--------------------------------------------------------------------------------
-----------S-------------------------S------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S-SSSS-----------S------S----SSSSSSSSSSSSSS
SSSSSSSSS---------S--S-SS----------S-----------SS-------------------------------
----------------------SS--------------------------------------------------------
--------SSS-SS-SS--SS--SSSSSSSS--------------------S---------S------------------
--------S--------------S--------------------------------------------------------
--SSSSSS-------S-----------------------------------S----------------------------
-------------------------S---S---------------------------S---------------S------
--------S------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
---S-S---S------SS-SS---SSS-SSSS----------------S---S-------S-----------S-SS----
--S-------S-----SS---------S--SS------------------------------------------------
--------------------------------------------------------------------------------
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----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
----------S-S-------SSSSSS--S-----S---------------S-S--S--S--S------------------
-S-----S-------------------------------------S---SS--------------S--------------
S---------S-----------------S--------S-----------------------S------------S-----
-----S----------S---S--------------------S-S----S-----------------S---S---------
------------------------
>forward_598
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------------------CCCTTTGCTACCCCATCCAC------------------------------------------
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>reverse_1935
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--------------ATTTTGTGTGTGGCAGGATTGC--------------------------------------------
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>forward_1352
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----------------------------------------------------TGGCTTGAGGGGAAATGGAA--------
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>reverse_2923
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------------------------------------------AGCGTCACTGGAATTCGTGT------------------
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------------------------
>forward_2735
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GTCG
GCCGACGTGATGAAT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_3611
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CAGACGGCGTTTGGTTGTATC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
