>input_sequence_40912
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TCATGGTACTTTGACAAAGCCCACCAGTGCTACCGTCCGGCGGT
GTGTACATAACGGAAGCACGGAGCGGATCGAGAATGGAAGCCGAGGACTACGCGGCCGGGTGCTGCTTCTCCCTCATGTG
CCAAGAGGACGGCGCCGACCTCGGCGACGGCCTCGCCGACGACGACGCCGGCAAGCTGCTGTTGATGTACAGTGCCGGCG
ACGACAACGACGTCGAGGAGGAAGACGAGGAGGGGTACTTGGACCACCTGGTGTCCAAGGAGAGCAGCTTCTGCTCCGCC
GATCCGTCCCCTTCCATGGCGTCCGAGGACTGGTTCCAGTGCGCGCGGCGCGACACCGTCCGGTGGATCCTTGAGGTGAA
TCATC----CAACAGACGCGTCTATATATCTGCATCCATTGGTTTCTTGATTGATGGAACAGAGCCCCTGACA--TCTCG
CCGGCGCCATTGCAGACGCGCGGGCACTTCGGGTTCTCCCACCGCACGGCGTACGTGGCGATTGCCTACTTTGACCGCTT
CTCCCTCCGGCGATGCGTCGACGTACGTGCACAATCGCCATCCATTGATCCCCTCTTAGCTTCCTCTGTTTCTTGAACCA
CGCGGATCGACACTGGTCACTGATTTTTTTGGTGCGT---GTGCGTGCGTGCAGAGGTCGGTGATGCCGTGGGCGGCGCG
GCTGCTGGCCATCGCGTGCGTGTCGCTGGCGGCGAAGATGGATGAGTGCCAGGCGCCGGCGCTGTCGGAGTTCCGCGCCG
ACGACGACTACGATTTCAGCTGCGACTCCATCGGCCGCATGGAGATGCTCGTGCTCTCCACGCTCGACTGGCGGATGGGC
GCGGTCACGCCCTTCGACTACCTCCCCTGCCTCTCCTCTAGGGTCCGGCGATTCAACGGCGCCGGCCGCGGCGGTGGCGG
CGGCCTCATCGCCGTCAAGGCCGCCGCCCTCATCTTCTCCGCCGCCGAAGGTTGGTTACTTGACAACCACATCGATCCAT
GGACCGTGCTCTGCTTCTATCAACTGACCGTGCTCTGTTCTTGCAGCGGCGAGCGTGCTCGACTACCGGCCGTCCACCGT
GGCCGCCGTCGCTATCTTGGCGGCCACCCACGGCGCGCTCACGAGGGAGCCACTGGAATCAAAGATCAGCAGCCTCTCCC
CGACCTGCCTCCTCGAGAAGGTGACTTGCTCGTCCTCGTCCACCATACTCATAGCTCCTTCCAGCGGGTCGTCAAACCAG
TTCGCCTGACGGCCGATGTTGTTGTGCGCAGGAGGATGTATATGCCTGCTACACCATGATGCTGCGCGATCCGTCGTCGC
CGAGCAAGACGGCCAAGAGATCGGCGTCCGACCGGGGCGACGCCGACAGTACATACGCACGCCTGGACGCCGCCTCCTTC
TCCGTCGCGGCGGCGATGAACAACAACAAGAGGGTGAGGCTGGAGCTGCCGGCCGTCCACCGGTGATCCAAGCCCGCCGC
CACGGCACGCTTGTTTTCCCCTAGGTGTCCAGCCGCGCGGCCGGAGCTTCGTCCAT-TAGTTGGTCGTCGCAGCAGTTGC
AACTCCGGCCATTTTCACCCTCGGTTTCTTTCCCATTTCTCTAGATTTTTTAGTTCTT----TGATCGGCGCACTGTCAA
ACAACCGGTTATTGGCAGTGCGGCCGGATTGGATTGGTTTGATTCCCGCGTGCCATCGAGTGGAGACAAGAAGAAGAAAA
AGAACAAAAAAATAATCAAGAAGGTGGCGAGCTTGATGAGGCCTCTGAGCTTTCCTACGGAGAGGAGAGCATAAAGCGGC
GCAGGATCGGAGGGAAAGCTTGGCTGGCTGGCTGCAAAGTTGCACGTCGGATTCCACTTCCCGGCAGGCGGCAGCGGCAG
CGGCGGCGGCAGCTGGCTGGTGTAGTGTAGGCGTAGAGAATAAATATCTCTGAATTCA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr4D_1_TraesCS4D01G079400
GGCGGCCGGAAAGCCCCCACATCGATTTTAGCGTCGGTAAGTCCCCAGGCGGCGATTTTTAGCGCCTCCTGGGGGGCCAA
CGGCTGAAGATGCTCTTACATTTTGGCCGCACAGTATATAAACCAAAGGAAAAGGCCCATGTAGTGAATCAATTTGTCTT
TTCACTTATGGGTGACATAGTAGATAATTTGTGTCAATTTCAGGGGTAATTTTAATGACATCCAGGCAGAAACAATAGCC
CCTTTATTATTAGCTGAGATTTCAGTAGCAAGCCCCGGTTTTGCAGCACTGAATCTGAATCAGTACCTACCGGGAAAGTG
CAGTCTAGT---CACGGTGACATTATGAATTTGCTCGAATCTTGAGGAATACATCTTGACCAAAGAAGAAGGCTTAAGGT
CATTGAAAAGAGAGAGAAAATTCAGAAATATCAGAAGAGCGTCGTGCGTGCCGCAGTGCTGTGAGGCGGGGCTGCGAGAG
CCATTTAAATAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----AGGGCAGCGGCTTGACCGCTTGAGGCGCGGCCACCTCGCCTTGCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCGGCCTA-CCCCGTCCGGATACTAGCCCTCATGGTACTTTGACAAAGCCCACCAGTGCTACCGTCCGGCGGT
GTGTACATAACGGAAGCACGGAGCGGATCGAGAATGGAAGCCGAGGACTACGCGGCCGGGTGCTGCTTCTCCCTCATGTG
CCAAGAGGACGGCGCCGACCTCGGCGACGGCCTCGCCGACGACGACGCCGGCAAGCTGCTGTTGATGTACAGTGCCGGCG
ACGACAACGACGTCGAGGAGGAAGACGAGGAGGGGTACTTGGACCACCTGGTGTCCAAGGAGAGCAGCTTCTGCTCCGCC
GATCCGTCCCCTTCCATGGCGTCCGAGGACTGGTTCCAGTGCGCGCGGCGCGACACCGTCCGGTGGATCCTTGAGGTGAA
TCATC----CAACAGACGCGTCTATATATCTGCATCCATTGGTTTCTTGATTGATGGAACAGAGCCCCTGACA--TCTCG
CCGGCGCCATTGCAGACGCGCGGGCACTTCGGGTTCTCCCACCGCACGGCGTACGTGGCGATTGCCTACTTTGACCGCTT
CTCCCTCCGGCGATGCGTCGACGTACGTGCACAATCGCCATCCATTGATCCCCTCTTAGCTTCCTCTGTTTCTTGAACCA
CGCGGATCGACACTGGTCACTGATTTTTTTGGTGCGT---GTGCGTGCGTGCAGAGGTCGGTGATGCCGTGGGCGGCGCG
GCTGCTGGCCATCGCGTGCGTGTCGCTGGCGGCGAAGATGGATGAGTGCCAGGCGCCGGCGCTGTCGGAGTTCCGCGCCG
ACGACGACTACGATTTCAGCTGCGACTCCATCGGCCGCATGGAGATGCTCGTGCTCTCCACGCTCGACTGGCGGATGGGC
GCGGTCACGCCCTTCGACTACCTCCCCTGCCTCTCCTCTAGGGTCCGGCGATTCAACGGCGCCGGCCGCGGCGGTGGCGG
CGGCCTCATCGCCGTCAAGGCCGCCGCCCTCATCTTCTCCGCCGCCGAAGGTTGGTTACTTGACAACCACATCGATCCAT
GGACCGTGCTCTGCTTCTATCAACTGACCGTGCTCTGTTCTTGCAGCGGCGAGCGTGCTCGACTACCGGCCGTCCACCGT
GGCCGCCGTCGCTATCTTGGCGGCCACCCACGGCGCGCTCACGAGGGAGCCACTGGAATCAAAGATCAGCAGCCTCTCCC
CGACCTGCCTCCTCGAGAAGGTGACTTGCTCGTCCTCGTCCACCATACTCATAGCTCCTTCCAGCGGGTCGTCAAACCAG
TTCGCCTGACGGCCGATGTTGTTGTGCGCAGGAGGATGTATATGCCTGCTACACCATGATGCTGCGCGATCCGTCGTCGC
CGAGCAAGACGGCCAAGAGATCGGCGTCCGACCGGGGCGACGCCGACAGTACATACGCACGCCTGGACGCCGCCTCCTTC
TCCGTCGCGGCGGCGATGAACAACAACAAGAGGGTGAGGCTGGAGCTGCCGGCCGTCCACCGGTGATCCAAGCCCGCCGC
CACGGCACGCTTGTTTTCCCCTAGGTGTCCAGCCGCGCGGCCGGAGCTTCGTCCAT-TAGTTGGTCGTCGCAGCAGTTGC
AACTCCGGCCATTTTCACCCTCGGTTTCTTTCCCATTTCTCTAGATTTTTTAGTTCTT----TGATCGGCGCACTGTCAA
ACAACCGGTTATTGGCAGTGCGGCCGGATTGGATTGGTTTGATTCCCGCGTGCCATCGAGTGGAGACAAGAAGAAGAAAA
AGAACAAAAAAATAATCAAGAAGGTGGCGAGCTTGATGAGGCCTCTGAGCTTTCCTACGGAGAGGAGAGCATAAAGCGGC
GCAGGATCGGAGGGAAAGCTTGGCTGGCTGGCTGCAAAGTTGCACGTCGGATTCCACTTCCCGGCAGGCGGCAGCGGCAG
CGGCGGCGGCAGCTGGCTGGTGTAGTGTAGGCGTAGAGAATAAATATCTCTGAATTCATATGGAGGATGTAGAATGGTGG
TGGTAGTGGTGGTGGTGGCCGGTGCTGTTGTTGTTGCAAGTT----GCAAAGCAAGTACCATGGTCCATTGC-CCTTGAA
AATTCTGATTTGGTTCAAAGGCGGGCTAGGCCTTTTGCTTCCTTCCCCACCCCTGCTCAAAGTGGACGCGCACACATGTA
CCAGTGGTGGTGGTGGTGGTGGTGGCTACTCGCAGAGCAGC---GCTGCACTTCACTGCACTTGCATGTGGTTTTTAGCG
GTTCATTCTGCCACGTACTGCTTACTGAACTGGCTTTTGTAATCCCTGTTCG--TTGGAAAGATGGCCTGTACGAGAATA
ATCCACACATGCAATTCTTCTCTCTCTTTG----------------------TTCGTATGCGTGTAGCTCTACATCTTGT
ATGCTCTCCGTTTTTTCAAGACAAC-AGGGTGTATCAACGAGAGTGGGTTTTCGGCTCCCGGGCTCCACGGAGCCTGAGA
TTTCGAGCAGTCCAAAAACCACATTTCGAAGTTTTGAAAAAATCTGCAAAAATACACATGTGCGTAGGGATGGTGTCTAC
CAGCGTGTAAATTTTCATTATGAAATACGTTGTTATGTGATCTACATAACAATAACAAAATCATTAACTTTTGTAGTGAA
TAGTACATGTGCTAAAAATACATGATTTTTTTTTGGTATAGCTCACGTCATAATGTATTTCATCAT-AAACTTTGCACAA
ATGTCGAAAACATCCCTATGTACAGGTGTAAATTTTTTAGAATCT--TTTAAAATACCAAAATTTGATTTTTGAAATTTT
GAAATTCCAGGCTCCATGGAGCTCTAGCTCCATTAGCAATTTCCTTATATCAACATTTTATAACACCACGATGGATGAAC
CAATAGAGACGTCAAGGATGCTGTCGGTGTCAAAACCGGCAGATCTCGGGTAGGGGGTCCCGAACTGTGCGTCTGAGGAT
CGAAGGTAACAGGAGACAGGGACACAATATTTACCCAGGTTCGGGCACTCTTGA
>chr4B_255
TGAAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTCCGTAGCAAG-CCT-GTTTTGCAGCACTGAATCTGC------ACCTACCGGGAAAGTG
CACGCTAGTCACCACGGTGACAGTATGAATTTGCTCGAATCTTGAGGAATGCATCTTGACCAAACAAGAAGGCTTAAGGT
CATTGAAAAGAGAGAGAAAATTCAGAAATATCAGAAGAGCGTCGTGCGTGCCGCAGTGCAGTGAGGCGAGGCTGCGAGAG
CCACTTAAATAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----AGAGCAGCGGCTTCACCGCTTGAGGCGCGGCCACCTCGCCTTGCCCCCTTCTCCCCCCTCCTCCACTCCCACTGCC
AGCTCCGG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CGGCATA-CCCCGTCCGGATCCTTACCCTCATGGTACTTTGACAAAGCCCACCAGTGCTACCGTCCGGCGGA
GTGTACATAACGGAAGCACGGAACGGATCGAGAATGGAGGCCGAGGACTACGCGGCCGGGTGCTGCTTCTCCCTCATGTG
CCAAGAGGACGGCGCCGACCTCGGCGACGGCTTCGCCGACGACGACGGCGGCAAGCTGCTGTTGATGTGCAGCGCCGGCG
ACGACAACGACGGC---GAGGAAGACGAGGAGGGGTACATGGACCACCTGGTGTCCAAGGAGAGCAGCTTCTGCTCCGCC
GATCCGTCGCCTTCCATGGCGTCCGAGGACTGGTTCCAGTGCGCGCGCCGCGACACCGTCCGGTGGATCCTTGAGGTGAA
CCATC----CAACAGACGCGTCTATATATCTGCATCCATTGGTTTGTTGA-TGATGGAACAGAGCCCCTGACATATCTCG
CCGGCGCCATTGCAGACGCGCGGGCACTTCGGGTTCTCCCACCGCACGGCGTACGTGGCGATTGCCTACTTTGACCGCTT
CTCCCTCCGGCGATGCGTTGACGTACGTGCACAATCGGCATCCATTGATCCCCTCTTAGCTTCCTCTGCTTCTTGAACGA
CGCGGAG----ACTGGTGACTGA-TTTTTTGGTGCGT---GTGGGTGAGTGCAGAGGTCGGTGATGCCGTGGGCGGCGCG
GCTGTTGGCCATCGCGTGCGTGTCGCTTGCGGCGAAGATGGATGAGTGCCAGGCGCCGGCGCTGTCGGAGTTCCGCGCCG
ACGACGACTACGATTTCAGCTGCGACTCCATCCGCCGCATGGAGATGCTCGTGCTCTCCACGCTCGACTGGCGGATGGGC
GCGGTCACGCCCTTCGACTACCTCCCCTGCCTCTCCTCCAGGCTCCGGCGATTCAACGGCGGAGGCCGCGGAGGTGGCGG
CGGCCTCATCGCCGTCAAGGCCGCCGCCCTCATCTTCTCCGCCGCGGAAGGTTAGTTACTTGACAACCACATCGATTCAT
AGACCGTGCTCTGCTTTTATCAGCTGACCGTGCTCTGTTCTTGCAGCCGCGAGCGTCCTCGACTACCGGCCGTCCACCGT
GGCCGCCGTCGCCGTCTTGGCGGCCACCCACGGCGCGCTCACGAGGGAGCCACTGGAATCCAAGATCAGCAGCCTCTCCC
CGACCTGCCTCCTCGAGAAGGTGACTTGCTCGTCCTCGTCCACCATACTCATAGCTCCTTCCAGTGGGTCGTCAAACCAG
TTCGCCTGATGGCCGATGTTATTGTGGTCAGGAGGATGTATATGCCTGCTACACCATGATGCTGCGCGATCCATCGTCGC
CGAGCAAGACGGCCAAGAGATCGGCGTCCGACCGGGGCGACGCCGATAGTACATACGCACGCCTGGACGCCGCCTCCTTC
TCCGTCGCGGCGGCGATGAACAACAACAAGAGGGTGAGGCTGGAGCTGCCGGCCGTCCACCGGTGATCCAAGCCCGCCTC
CACGGCACGCTTGTTTTTCCCTAGGTGTCCAGCCGCGCGGCCGGAGCTTCATTAGTATAGTTGGTCGTCGCAGCAGTTGC
AACTCCGGCCATTTTCACCCTCGATTTCTTTCCCATTTCTCTAGATTTTTTAGTTCTT----TGATCGGCGCACTGCCAA
ACAATCGGTTATTGGCAGTGCGGCCGGATTGGATTGGTTTGATTCCCGCGTGCCATCGAGTGGAGACAAGAAGAAGAAAA
AGAAGAAAAAAATAATCAAGAAGGTGGCGAGCTTGATGAGGCCC--GAGCTTTCCTACGGAGAGGAGAGCATAAAGCAGC
ACAGGATCGGAGGGAAAGCT----TGGCTGGCTGCAAAGTTGCACGTCGGATTCCACTTCCTGGGA------AGCGGCAG
CGGCGGCGGCAGCTGGCTGGTGTAGTGTAGGAGTAGAGAATAAATATCTCTGAATTCATATGGAGGATGTAGAA---TGG
TGGTGGTGGTGGTGGTGGCCGGTGCTGTTGTTG---CAAGTT----GCAAAGCAAGTACCATGGTCCATTGC-CCTTGAA
AATTCTGATTTGGTTCAAAGGCGGGCTAGGCCTTTTGCTTCCTTCCCCACCCCTGCTCAAAGTGGACGCGCACACATGTA
CGAGTGGTGGTGGTGGTGG------CTACTCACAGAGCAGCAGCGCTGCACTTCACTGCACTTGCATGTGGTTTTTAGCG
GTTCATTCTGCCACGTACTACTTACTGAA-------------TCCCTGTTCG--TTGGAAAGATGGCTGGTACGAGAATA
ATCCACACA-------------------TG----------------------TTCGTATGTGTGTAGCTCTACATCTTGT
ATACCCACCG-TTTATGAAGACAAC-AGGATGTATCAACGA-------------------------CACGGAGCCTGAAG
TTTCGAGCAGTTCGAAAACCACATTTCAAGGTTTTGAAAAAATATGGAAAAATACACATGTACACAGGGATG--------
--GTGTGTAAATTTTCAATATGAATTACATTGTTATGTGATCTACACAAGAATAACATAATCATGAACTTTTGTAGTGAA
TAGTACATGTGCTAAAAATACATGA-TTTTTTTTGGTATGGTTCACATCATAATGTATTTCACCATGAAACTTTGCACAG
ATGTGGAAAACATCCCTATGTACATGTGTAATTTTTTCAATAAAAAGTTTAAAACACCAAAATTTGACTTTCGGAATTTT
GAAATTCCAGGCTCCATGGAGCTCGAGCTCCATTAGCAATTTCCCTATATCAACACTTTATAACAATACGATGGATGAAC
CAATGGAGAC----------------------------------------------------------------------
------------------------------------------------------
>chr4A_259
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------ATTTCCGTAGCAAG-CCCGGTTTTGCAGCACCGAATCTGC------ACCTACCGGGAAAGTG
CAGGCTAGT---CACGGTGACATTATGAATTTGCTCGAATCTTGAGGAATGCATCTTGACCAAACAAGAAGGCTTAAGGT
CATTCAAAGAGG-GAGAAAATTCAGAAATATCAGAAGAGCGTCGTGCGTGCCGCAGTGCAGTGTGGCGAGCCTGCGAGAG
CCACTTAAATAGGGAAAATAATTCTATGAGACCAGGTCTCACGGTTTAGCAGGTGAGACCCATCCTGATGGATGACACGT
GACATTCACAAATCACAAAGCATCTACCTCACCCCCCCACCTGAAATCAGGGGGGAAAGATTAGATACTTTGTGATTTGT
GAATGCCACGTGTCATCCATCAGGACGGGTCTCACCTGTTTTATATGAGACCTGGTCTCATATAATTTTTTTTTCCTTAA
ATAGAGGGCAGCGGCTTGACCGCTTGAGGCGCGGCCACCTCGCCCTG---CCTTCTCCCCCCTTCTCCACTCCCACTGCC
AGCTCCGG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CGGCCTTTCCCCGTCCGGATCCTAACCCTCATGGTACTTTGACAAAGCCCACCAGTGCTACCGTCCGGCGGA
GTGTACATAACGGAAGCACGGAGCGGATCGAGAATGGAAGCCGAGGACTACGCGGCCGGGTGCTGCTTCTCCCTCATGTG
CCAAGAGGACGGCGCCGACCTCGGCGACGGCCTCGCCGACGACGACGCCGGCAAGCTGCTGCTGGTGTACAGTGCCGGCG
ACGATAACGGCGGCGAGGAGGAAGACGAGGAGGGGTACTTGGACCACCTGGTGTCCAAGGAGAGCAGCTTCTGCTCCGTC
GATCCGTCGTCTTCCATGGCGTCCGAGGACTGGTTCCAGTGCGCGCGGCGCGACACCGTCCGGTGGATCCTTGAGGTGAA
CCATCGATCCAACAGACGCGTCTATATATCTGCATCCGTTGGTTTTTTGA-TGGTGAAACAGAGCCCCTGACATCTCTCG
CCGGCGCCATTGCAGACGCGCGGGCACTTCGGGTTCTCCCACCGCACGGCGTACGTGGCGATTGCCTACTTCGACCGCTT
CTCCCTCCGGCGATGCGTCGACGTACGTCCACAATCGCCATCCATTGATCCCA-CTTAGCTTCCTCTGTTTCTTGAACCA
CGCGGAG----ACCGGTCACTGATTCTTTGGTTCGTGTGCGTGCGTGCGTGCAGAGGTCGGTGATGCCGTGGGCGGCGCG
GCTGTTGGCCATCGCGTGCGTGTCGCTGGCGGCGAAGATGGATGAGTGCCAGGCGCCGGCGCTGTCGGAGTTCCGCGCCG
ACGACGACTACGATTTCAGCTGCGACTCCATCCGCCGCATGGAGATGCTCGTGCTCTCCACGCTCGACTGGCGGATGGGC
GCGGTCACGCCCTTCGACTATCTCCCCTGCCTCTCCTCCAGGCTCCGGCGATTCAACGGCGGCGGCCGCGGAGGTGGCGG
CGGCCTCATCGCCGTCAAGGCCGCCGCCCTCATCTTCTCCGCCGCCGAAGGTTGGTTACTTGACAACCACATCGATCCAT
GGACCGTGCTCTGCTTGTATCAACTGACCGTGCTCTGTTCTTGCAGTGGCGAGCGTGCTCGACCACCGGCCGTCCACCGT
GGCCGCCGTCGCCGTCTTGGCGGCCACCCACGGCACGCTCACGAGGGAGCCACTGGAATCCAAGATCAGCAGCCTCTCCC
CGACCTGCCTCCTCGAGAAGGTGACTTGCTCGTCCTCGTCCACCATACTCAAAGCTCCTTCCAGTGGGTCGTCAAACCAG
TTCGCCTGACGGCCGATGTTGTTGTGCGCAGGAGGATGTATATGCCTGCTACACCATGATGCTGCGCGATCCGTCGTCGC
CGAGCAAGGCGGCCAAGAGATCGGCGTCCGACCGGGGCGACGCCGACAGTACATACGCGCGCCTGGACGCCGCCTCCTTC
TCCGTCGCGGCGGCGATGAGCAACAACAAGAGGGTGAGGCTGGAGCTGCCGGCCGTCCACCGGTGATCCAAGCCCGC---
--------GCTTGTTTTTCCCTAGGTGTCCAGCCGCGCGGCCGGAGCTTCATCCAT-TAGTTGGTCGTCGCAGCAGTTGC
AACTCCGGCCGTTTTCACCCACGATTTCCTTCCCATTTCTCTAGATTTTTTTAGTTCTTTGATGATCGGCGCACCGCCAA
ACAACCGGTTATTGGCAGTGCGGCCGGATTGGATTGGTTTGATTCCCGCGTGCCATCGAGTGGAGACAAGAAGAAGGAAA
AGAACAAAAAAATAATCAAGAAGGTGGCGAGCTCGATGATGCCC--GAGCTTTCCTACGGAGAGGAGAGCGTAAAGCGGC
GCAGGATCGGAGGGAAAGCTTGGCTGGCCGGCTGCAAAGTTGCACGTCGGATTCCACTCCACTTCCCGGGA----GGCGG
CGGCGGCGGCAGCTGGCTGGTGTAGTGTAGGCATAGAGAATAAATATCTCTGAATTCATATGGAGGATGTAGAAC-----
-------GGTGGTGGTGGGCGGTGCTGTTGTTGTTGCAAGTTGCAAGCAAAGCAAGTACCATGGTCCATTGCTCCTTGAA
AATTCTGATTTGGTTCAAAGGCGGGCTAGGCCTTTTGCTTCCTTCCCCACCCCTGCTCAAAGTGGGCGCGCACACATGTA
CCAGTGGTGGTGGTGGTGGTGGTGGAGGTGCGAGCAGCG----------------CTGCACTTGCATGTGGTTTTTAGCG
GTTCATTCTGCTACGTACTGCTTACTGAACTGGCTTTTGTAATCCCTGTTCGTTTTGGAAAGATGGCTGGTACGAGAATA
ATCCACGCA-------------------TGCAATTCTTCGCCTCTCTCTTTGTTCGTATGTGCGTAGCTCTACATCTTGT
ATACCCTCCG-TTTTTTAAGACAACAAGGATGTATCGACGA-------------------------CACGGAACCTGAAA
TTTCGAGCAGTTCAAAAATCACATTTCAAAGTTTTGAAAAAATATGGAAAAATACACATGCACGTAGCGATGGTGTCTAC
AAGTGTGTAAGTTTTCATTATGAAATGCGTTGTTATGTGATCTACACAAAAATAACAAAATCATGGACTTTT-TAGTGAA
TGATACATGTGCTAAAATACATGA----TTTTTTTGTATAGCTCACATCATAATGTATTTCACCATGAAACTTTACACAG
ATGTGGAAAACATACCTAG----AGGTGTAATTTTTTCAGAATTT--TTTAAATTACCAAGATTTGATTTTTGAAATTTT
GAAATTCCAGGCTCCATGGAGCTCGAGCTCCATTAGCAATTTCCTTATATCAACATTTTATAACAATATGACGGATGAAC
CAATAGAGACGTCGAGGATGC-----------------------------------------------------------
------------------------------------------------------
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS-----S--------S------------------------SSSSSSS----------------
---S----------------------------------------------S-------------S---------------
-----------------------------------------------------------S--------S-----------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS--------------------S---S----------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------S-----------------------------------------------------------------------
S--------------------------------------------S----S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------SSSSS---------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------S---S------------------S---------S--------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
------------SS----------------------------------------------S-------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
-----------------S--------------------------------S-----------------------------
-----------------------S----------------------------------------------------S---
--------------------------------------------------------------------------------
-------------------------------------------SSS----------------------------------
------------------------------------------------------------------S-S-SS--------
--------------------------------------------------------------------------SSS---
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------SS-----------
---------SSSSSSSSSSSSSSSSSSS--------------------------------S-------------------
--S-S-----S-----S------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSS------------S-
-----------S---------------S---------------S--S--------------S------------------
S--S------------------------------------------S--S--------------S---------------
-------------------------S--------------------S---------------S----------------S
----S--------------------------S-----S-----S------------------------------------
------------------------S----------------------------------------SS-------------
-------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_71
---------------------------------------------------GCGATTTTTAGCGCCTCCTG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_1453
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TCGAGGAGGAAGACGAGGAG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_96
----------------------------------------------------------------------------CCAA
CGGCTGAAGATGCTCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_1651
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TTGATGGAACAGAGCCCCTG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_110
--------------------------------------------------------------------------------
----------TGCTCTTACATTTTGGCCGC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_2119
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TAGGGTCCGGCGATTCAAC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_1847
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GTTTCTTGAACCA
CGCGGAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_3742
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GCGTAGGGATGGTGTCTAC
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
