>input_sequence_40863
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------GCAGCAGCACTTC-----AGCAACAGCAACCCAGCACAGCTA-TTTGCAGATGGTGATACA
AGCCTCTCAACCGTCCTCCGCGGTGAGTGTGTGCAAGAGGTCAGCTGTACAGGGGCCGACCTTGGTGGTAACATTGAGGA
CA----CTGGTTTTGGTTTGTCTTGCAAAAATGGTCTAACTGTAACTTT-TGTACAGGATCCAACAGATGCCAGGGGCGA
ACCTGCCTCTCAGCCTGAAAAGTCAAAGGTTGAGGAGGAGTTGAAGAAAGCAGCTACACATCGGTCTCGGCCTAGCTGCT
ATTATTACTATTACTTCAATGAAGGAGATCCTCAGAATTATTCTGATGATTTGGAG------ATGGAACAAGGACTATTA
CCTGTTGTTATGTTCCCAGATAAACAGGTTCAGGTCGAGGAGTGGAAGATAGAAGCACAACAGTTTGAGACTGATTTTGG
CGAGATGGAAATGAAGATTCATAGGTTCCCTGCAAGCACGCGGAGCCTTGGACGGCGTTATATCCTCCCAATGGCTGTGA
GCATCGGTCTTTACCACCATGGCTCAAGTAGCCTGCATGAGATGGAGAAGGTGAAGCGCGTGGCTACACACCACTTCATC
AGTTAC----TCAGGCCGCTCATTTGAGGAGATGTATGCGGCGGTCTTCTCCGTCATAGGTGCTGCCCGCAGCTTCTACG
ACACCAA------GGATTCCAAGGTCGACGTAGGAGATGCTGAATTTGCGGACATGATGTTCATCGATGGTTGCTTCTTG
CTGCAGTATATGCTTATGTGTACCGGCCTTGGCAAGCTGCCTCCGTCATTATTGTCTTGCTTCAAGTCCAACGAGGCTTG
CATCATCAACGACATAATGCTGCTCGAGAATCAACTTCCCTGGATGGTGGTCAACATCCTAAGGACGTTCAGGTCCGTGC
CTGTGGAGGAGTTTATCGGTAAGATGGGACGCACACTCCAAATCCGTGGGGACATGCACAGGAGACCAGTTGTGATGGAT
GCTTGCTACATGCCGCCACATCTTCTTGGCATCCTCCTGTTCTACAAAGCCGGAGGCATAAATAATAATGTGCCCCTGTC
TGTTCCAGATGGTTTTAGATCCATGTCAAAGAGTATTAGCGCCATTGAGCTTGCAGAGATTGGCATTAAGCTCACAGCCG
GCAAGACGACAAAGTTCATGGACACGGGCATCAAGAAAACATTCCTCTCTGCCGAGATCTTCCTGGCACCTCTGTTGCTG
GACGACATAAGGTCCTGCTGGCTTGTCAACATGGCGGCTTTCGAGGTATGCCTGGGCATGGCAGCTGGTGCTCATCAAAG
TACAGCAGTCGTCTGCTCCTACCTTGCTGTCCTCGCCATGCTCATGGATCGGGAGGAGGACGTGCACGAGCTGCGATCCA
AGCGCCTGGTGCAGGGAGAACTCACCAACAAAGAGACGCTTGACTTCTTCAAGATGCTTGTCAAGTGCATAAGTGGCGGC
CCCCTCTACATTCAAATCATGGAGGAGGTTGAGGCCTACAAGCTCAACAGGTGGATGTGGATCAAGGTGCACCAGTTCGT
CTACAAAAACTTCAAAGCAATCGTCACGGTGCTCTCCATCACTGGTGTTCTTGTGGGCATCTTCAAGGCTATCCTCTCTC
TCAAGAGACACTAGCTTAATTTACATGTCTTCCATCTTTCCGTTGATTTTGTGCCATATATTACATACTTCTCTGTATAT
ACTATTA--CTATGTAACTAAATCATGGATGTAGCTGGATCAGTAGCATCCAAAGACTGGTCATTATCTAGC----CACA
AGATCAATATACTC--ATATTGCGCACAGGTATCTTAAGAGCTGATCAATGG---CTAAGATGAACTGTGAATTAGTATT
GTGAACGGGCCATGGTCGTCTTTGATTAAAGAACAAACAATATCACATAATTAATCAGATTTTAATAC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>chr4A_1_TraesCS4A01G026800
TCTCAACCTTGGAACGACTCGACGACTCTTCGACTCGTAAACATTGGGTCAGGCACACTTAATATAATCCAACAGAAAAT
AGTTTTAAGAAAAAGCGGAAGTATATGCAAGACAGTAAAGTCTTACTTCTCGTGTTTCTTAGGAGTGACAGGTCATTTTG
TCAAAGTATACTTATGCTTCACCCTAGTTCAACGTTTATAAACAAATCCATCTTATGCTGGCATTTGTCTGTTTCCTAAA
TAATTTACACTTTTCTAGAGGTTGGTTCTGGTGCAACTATTATCAAGCATGTGTGTGCTAGTTGCATTAAGAGGTTGCCC
AAAGTCATAAGAAAAGGAAAATGCTCAGAGGAGGTACCAAGTAGCATTGGGCATTGATTGCTATGATATTCTTAGTTCTT
ACCACTAGAATACAAGTGATGTAGTGCAACGCCCAGAGCTATTCTTGAGCAAGACCATTGAAGCTGCTGCTGGTGTAGAT
TTTATGAAGCTTCTTGTTATTGTAGCATACCTTTCCACCTTCTTTGCCCACGACAAAAACAAGTCG-------AGACTTG
TTCCCACAATTAGCAGGCAATGTTTTTGCAAGGGATGTATTTAACCAAGTTTTATACATGTTAATGAGATGATA------
---TTTTGCATGCACCATCTTCTGCAGCACACATGGATTGGTGTCTTCTTTACTTGCACCCAGCTCATGACTTGCTGTTC
TGGCTTTAGGAATTT-------ATTCCTCAGAGCTCATAG----------------------------------------
-------------------------------CTTTGACTTTGAGAGGAAATTGTTTGAGGTCTGGGAATGTCGACAGGTC
TGGCTGGCAATGTGCTACCAAGTCAATACCAACTAAAACTTGCCAATGTTTTCTGAGTTAAAGCCTGAAAGTCAAAACAT
TAAGACGCAACAAGTTGGATTAT--TCCATCATTTATCATGGAGGCAGCAATGA-----------------CAAGTTGCT
GACAGAACGTGGAGGGCAGCAACTAGTCTAG--------CTAGTACAAAGCCTATATATACATTTAACTTGGATAGGAAC
C------------------GCAGCAGCACTTC-----AGCAACAGCAACCCAGCACAGCTA-TTTGCAGATGGTGATACA
AGCCTCTCAACCGTCCTCCGCGGTGAGTGTGTGCAAGAGGTCAGCTGTACAGGGGCCGACCTTGGTGGTAACATTGAGGA
CA----CTGGTTTTGGTTTGTCTTGCAAAAATGGTCTAACTGTAACTTT-TGTACAGGATCCAACAGATGCCAGGGGCGA
ACCTGCCTCTCAGCCTGAAAAGTCAAAGGTTGAGGAGGAGTTGAAGAAAGCAGCTACACATCGGTCTCGGCCTAGCTGCT
ATTATTACTATTACTTCAATGAAGGAGATCCTCAGAATTATTCTGATGATTTGGAG------ATGGAACAAGGACTATTA
CCTGTTGTTATGTTCCCAGATAAACAGGTTCAGGTCGAGGAGTGGAAGATAGAAGCACAACAGTTTGAGACTGATTTTGG
CGAGATGGAAATGAAGATTCATAGGTTCCCTGCAAGCACGCGGAGCCTTGGACGGCGTTATATCCTCCCAATGGCTGTGA
GCATCGGTCTTTACCACCATGGCTCAAGTAGCCTGCATGAGATGGAGAAGGTGAAGCGCGTGGCTACACACCACTTCATC
AGTTAC----TCAGGCCGCTCATTTGAGGAGATGTATGCGGCGGTCTTCTCCGTCATAGGTGCTGCCCGCAGCTTCTACG
ACACCAA------GGATTCCAAGGTCGACGTAGGAGATGCTGAATTTGCGGACATGATGTTCATCGATGGTTGCTTCTTG
CTGCAGTATATGCTTATGTGTACCGGCCTTGGCAAGCTGCCTCCGTCATTATTGTCTTGCTTCAAGTCCAACGAGGCTTG
CATCATCAACGACATAATGCTGCTCGAGAATCAACTTCCCTGGATGGTGGTCAACATCCTAAGGACGTTCAGGTCCGTGC
CTGTGGAGGAGTTTATCGGTAAGATGGGACGCACACTCCAAATCCGTGGGGACATGCACAGGAGACCAGTTGTGATGGAT
GCTTGCTACATGCCGCCACATCTTCTTGGCATCCTCCTGTTCTACAAAGCCGGAGGCATAAATAATAATGTGCCCCTGTC
TGTTCCAGATGGTTTTAGATCCATGTCAAAGAGTATTAGCGCCATTGAGCTTGCAGAGATTGGCATTAAGCTCACAGCCG
GCAAGACGACAAAGTTCATGGACACGGGCATCAAGAAAACATTCCTCTCTGCCGAGATCTTCCTGGCACCTCTGTTGCTG
GACGACATAAGGTCCTGCTGGCTTGTCAACATGGCGGCTTTCGAGGTATGCCTGGGCATGGCAGCTGGTGCTCATCAAAG
TACAGCAGTCGTCTGCTCCTACCTTGCTGTCCTCGCCATGCTCATGGATCGGGAGGAGGACGTGCACGAGCTGCGATCCA
AGCGCCTGGTGCAGGGAGAACTCACCAACAAAGAGACGCTTGACTTCTTCAAGATGCTTGTCAAGTGCATAAGTGGCGGC
CCCCTCTACATTCAAATCATGGAGGAGGTTGAGGCCTACAAGCTCAACAGGTGGATGTGGATCAAGGTGCACCAGTTCGT
CTACAAAAACTTCAAAGCAATCGTCACGGTGCTCTCCATCACTGGTGTTCTTGTGGGCATCTTCAAGGCTATCCTCTCTC
TCAAGAGACACTAGCTTAATTTACATGTCTTCCATCTTTCCGTTGATTTTGTGCCATATATTACATACTTCTCTGTATAT
ACTATTA--CTATGTAACTAAATCATGGATGTAGCTGGATCAGTAGCATCCAAAGACTGGTCATTATCTAGC----CACA
AGATCAATATACTC--ATATTGCGCACAGGTATCTTAAGAGCTGATCAATGG---CTAAGATGAACTGTGAATTAGTATT
GTGAACGGGCCATGGTCGTCTTTGATTAAAGAACAAACAATATCACATAATTAATCAGATTTTAATACCTCTATTGAGTG
AGACATCTCTTTTAGGAAGAGGAAAGTCAGATCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTTATGGAACGAACTCAACTGAAGGATAATTAATCAAGTAAGCAATCATCAATTTTT
CGGAGAATAATGTGAATATGCCGGGCCAGGCAAGCATGTGGTGTGATGCTTCAACAATCCACCCTATGATATACTCCCTC
CGTTCCTTTATATAAGGTGTATTTGTTTTTTCAGAAAACAAACGAGTGCATGTTTGACTGAGTTTTTATAAAAATATTTT
CGATATCCACAATATGAATTTTACATCATCTGATCCATCATGAAAAGTAGTTTCATATTTCATTTATTAGATGTTGCTAT
TTTATTCTATAATCTTGGTCAAACATTCAAATGGTTGACTTGCACGAAAATCAATACACCTTACATTCTGAAATGTAGCT
AGGGAGTATGTATGTATGACCTTTTTTTTAATGAAAATAGTCAATCTACTATAAAGATTTGTCAGAAGTACAAAGCACAT
CAAACATAATAAAAATTACATCTAGGTTCATGGACCACCGAACGACGATTGTCGCCGTCAAAACGAGCTGCTGTTGCACC
GTTGTCACTGCTCCCATACTGGATCCAA
>chr5D_47
----------------------------------------------GGTCAGGCACACTAAATATAATCCAACAGAAAAT
AGTGTCAAGAAAAAGCGCAAG--TATGCAAGACAGTTAAGTCTTACTTCTGGTGTTTCTTAGGAGTGACAGGTCATTTTG
TCAATGTATACTTATGCTTCACCCTAGTTCAACGTTTATAAACAAATCCAT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------ACCTTTCCACCTTCTTTGCCTACGACAAAAACAAGTCAAGAGTCAAGACTTA
TTCCCACTTTTAGCGGGCAATGTTTTTCCAAGGGATGTATTTAAGCAAGTTTTATACATGTGAATGAGATGATTTCTGTT
TTTTTTTGCATGCACCATTTTCTGCAGCACACATGGATTGGCGTCTTCTTTACTTGCACCCAGCTCATGACTTGCTGTTC
TGGCTTTAGGAATTT-------ATTCCTCAGAGCTCATAGGTTTGGCTTTGAGAGGAAATTGTTTGAGGTCTGTGAACGC
CGACAGGTCTGGCTGGCAATGTAGCTCATAGCTTTGGCTTTGAGAGGAAATTGTTTGAGGTCTGTGAACGTCGACAGGTC
TGGCTGGCAATGTGCTACCAAGTCAATATCAACTGAAACTTGCCAATATTTTGTGAGTTAAAGACTGAAAGTCAAAACAT
TAGGACGCAGCAAGTTGGATTATC--CCATCATTTATCATGGAGGCAGCAATGA-----------------CAAGTTGCT
GACAGAATGTGGAGGGCAGCAACTAGTCTAG--------CTAGTAGAAAGCCTATATGTACATTCAACTTAGATGGGAAC
CCCGAGAAGTATCTAGCTAGCAGTAGCACTTC-----GGCAGCAGCAACCCAGCACAGCTATTTTGCAGATGGTGATACA
AGCCTCTCAGCCGTCCTCCGCGGTGAGTGTGTGCAAGAGGTCAGCTGTACAGGGGGCGACCTTGGTGGTAACATTGAGGA
CA----CTGGTTTTGGTTTGTCTTGCAAAAATGGTCTAACTGTAACTTT-TGTACAGGATCCAACAGATGCCAGGGGCGA
ACCTGCCTCTCAGCCTGAAAAGTCAAAGGTTGAGGAGGAGTTGAAGAAAGCAGCTGCACATCGGTCTCGGCCTAGCTGCT
ATTATTACTATTACTTCAATGAAGGAGATCCTCAGAATTATTCTGATGATTTGGAGATGGAGATGGAACAAGGACTATTA
CCGCTTGTTAATTTCCCGGATAAACAGGTTCAGTTCGAGGAGTGGAAGATAGAAGCACAACAGTTTGAGACTGATTTTGG
CGAGATGGAAATGAAGATTCATAGGTTCCCTGCAAGCATGCGGAGCCTTGGACGGCGTTACATCGTCCCAATGGCCGTGA
GCATCGGTCTTTACCACCACGGCTCAAGTAGCCTGCATGAGATGGAGAAGGTGAAGCGCGTGGCTACACTCCACTTCATC
AGTTACTCGATCAGGCCGCTCATTTGAGGAGATGTATGCGGCGGTCTTCTCCGTCATAGGTGCTGCCCGCAGCTTCTATG
ACACCAA------GGATTCCAAGGTCGACGTAGGAGATGCTGAATTTGCAGACATGATGTTCATCGATGGTTGCTTCTTG
CTGCAGTATATGCGTATGTGTACCGGCCTTGGCAAGCTGCCTCCGTCATTGTTGTCTTGCTTCTAGTCCAACGAGGCTTG
CATCATCAATGACATAATGCTGCTCGAGAATCAACTTCCCTGGATGGTGGTCAACATCCTAAGGAGGTTCAGGCCCATGC
CCGTAGAGGAGTTCATCGGTTAGATGGGACGCACACTCCAAATCCGGGGGCACATGGACAGGAGACCAGTTGTGATGGAT
GCTAGGTGCACGCCGCCACATCTTCTTGCCATCCTCTTGTTCTACAAAGCGGGAAGCATAGATAATAATGTGCCCCTGTC
TGTTCCAGATGGTTTTAGATCTATGGCAAA--------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------
>chr5B_670
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------TTCTTTACTTGAACCCAGCTCATGACTTACTGTTT
TAGCTTTAGGAATTACTCTGTAATTCCTTGGAGCTCATAG----------------------------------------
-------------------------------CTTCGACTTTAAGAGGAAATCAGGTCTCTATGT---ATGTCAACAGGTC
TAGCTGGCAATGTGCTACCAAGTCAGTACCAACCAAAATTTGCCAATATTTTGCGAGTTAAAGCCTGAAAGTCAAACCAT
CAGGACCCGGCAAGTTTGCGGTATCTCCGCCATTTGTCGCGGAGGTAGCGATGATAGGTATCTGCAGCAAGCAAGTTGCT
CACAGAATACGGAGGGAAGCAACTAGTCTAGCACTTTGGCTAGTAGAAAGACTATACATACATTTAACTTGGATGGAACC
CT---GAACTATCTAGCTAGCAGTAGCCAGTAGCATTGGCAGCAGCAAACCAGCACAGCTA-TCTGCAGATGGTGATACG
AACCTCTCAACTGGTCTCCACGGTGAGCGTGTGCAAAGAGCTCAGC-------------------TGGTAACATTAATTG
AAGATGCTGGTTTTGGTTTGTCTTGCAAAAAGGGTCTAACTGTAATTTTGTGTACAGGATCCAACAGATGCCTTGGGTGA
GCCTGCCTCTCAGCCAGAAAAGTCGAAGGTTGAGAAAGAGTTGAAGAAAGCAGCTGCACAACGGTCTCGGCCTGGTCCTT
ATGACTG---TTACTTTTATGAAGGAGATCCTCAGAATGATTCTGATGAGGTAGAG------ATGGGAGAAGTATTATTG
CCTGTTGTTAATTTCCCGGATAGACAGGTTCAGATCGAGGAGTGGAAGACAGAAGCAGACCAGTTTGAGACTGATTTCGA
CAATATGGAAATGAAGATTCATAGATTCCCCGCAAGCCTGCGAGGTCTTGGCCGGCGTTACATCGTCCCGATGGCCGTGA
GCATCGGTCTTTATCACCACAACTCAAGTAAGCTGAATGAGATGGAGAAGGTGAAGCGTGTGGCTGCGTACCACTTTATC
AGGGAC----TCGGGCCACCCATTTGACCAGATGTATGCGGCGGTCTTCTCGGTCATAGGTGCTGCCCGCGGCTTCTACG
ACACCAACACCAAGGATGCCAATGTCAACATAGGAGATGCTGAATTTGCAGACATGATGTTCATTGACGGCTGCTTCTTG
CTGCAGTATATGCTTATGTATACCGGCCGTGGCAAGCTGCCTCCGTCGTTACTGTCCTGCTTCGAGTCAAACCAAGCTTG
CATCAGCAATGACATAATGCTGCTCGAGAATCAACTTCCCTGGCTGGTGGTTGAAACCCTAAGGATATTCAGGCCTGTGT
CTGTGGAGAAGTTCATCGGTATGATGGGACGCACGCTCCAAATCCGCGGGGACATGGATAGGAGACCAATTGTCCTGGAT
GCTAGCTACATGCCGCC-----------GCATCCTCCTGTTCTACAAAGCGGGAAGGAGAAATAATAGTGTGCCCCTGTC
TGATCCAGATGGTTTAAGATCTATGTCAAAGAGTATTAGCGCCATCGAGCTTGCAGAGATCGGCATCAAGCTGACAGCCG
GCAAGACGGCAAAGTTCATGGACACAGGCATCAAGAAAGGATTCCTCTCTGCTGAGATCTTCCTGCCGCCTTTGCTGCTG
GACGATATAAGGTCCTGCTGGCTTGTCAACATGGCGGCTTTTGAGGTATGCCTGGGCATGGAAGCAGGTGCTCGTCAAAG
CAAGGCGGTCGTCTGTTCCTACCTTGCTGTCCTCGCGATGCTCATGGATCGGGAGGAGGACGTGCACGAGCTACGATCCA
AGCGTCTGGTGCAGGGAGAACTCACCAACAAGGAGACGCTCGATTTCTTTAAGAAGCTTGTCAAGTGCATAAGTGGCGGT
CCCCTCTATGTTCACATCATGGAAGAGGTTGAGGCCTACAAGCTCAATAGGTGGATCTGGATCAAGGTGCATCAGTTCGT
CTACAAAAACTTAAAAGCAATCGTCGCGCTGCTCTCCATCGTCGGTGTTCTTGTCGGCATCTTCAAGACTCTCCTCTCTA
TCAAGAAACACTAGCTTAATTTACACGCGTTTTTTATTCTTCTGCTGA-TGTGCCATATATCACATGCTTGTCTGTACGT
ATGGTAGTCCTATGTATGTAAACCATGGATGTATCTAAATCAGTAGCATTCAAGGCTGATATTATTGGGAGTTTATCACC
AGATCAATATACACTAAAATTACGCACGCGTATG-TAAGAGCTGGTCAATGGTAGCTAAGATGACATGTGAAC------T
GTGAACTGGTCATG---GTCTTTGACTGACGAACAAACAATATCCCATAATTAGCCTGATTTTAATACCTCTACTGAGTG
AGACATCTCTTTTAGGAGGCGAAAAGTCAGATCA----------------------------------------------
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----------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S--------------------
---S-S-----------S---SS-------------S-------------S-----------------------------
----S----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S----------------S-------------S
-------SS-----S------------S----------------S----------------S-----------S------
------------------S----------------------S--------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-----------------------------------------------S----S---------------------------
--S------S----------------------------------------------------------------------
-------S-------------------------------------S----------------------------S-----
-----------------------S-------------S---S--------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
----------SS-----S---------------S----------------------------------------------
--------------------------------------S---------------------S---S----------S----
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
---------------------------------------------------------------S----------------
---------S-------------------------------------------------------S-------S------
-------------S--------------------------------S---------S-----------------------
---S----------------------------------------------S---S-------------------------
---------------------S-----------------------S--------------S-----S-----S-------
--------S----------------S------------SS------------S------------S-S---S--S-----
-----S-----------------------------------S-------------------S---S-------S------
S-SS--S--------S--------------------S-----------------------------------S-------
----S--------------------------S--------S--S-----S----S------------------------S
--------SS----S--------S-----------------------S--------S--------------S--------
------------S------------S--S-----------SSS-----------S------------S--S--------S
------S------------------S-SS--SSS-S--SSSS-SSSSSS------------S----S---S------SS-
-SSS-SS---------SS----S----------S--SS-----------S---S-SSSSSSSSS-SSSS--S-------S
------------S----S---S-----SS----SS---------S-------------------SS------SSSSSSS-
------S--S----SSS--------S-S-S--------------S--------SS-S----------------S------
-----------------S-S-S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_60
----------------------------------------ACATTGGGTCAGGCACACTT--------------------
--------------------------------------------------------------------------------
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>reverse_1984
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------AAGTCCAACGAGGCTTG
CAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------
>forward_1144
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ACTTGGATAGGAACCGCAGC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_2286
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGAGCTTGCAGAGATTGGCA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------
>forward_2127
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GACGCACACTCCAAATCCGT---------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------
>reverse_4071
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------CTGTTGCACC
GTTGTCACTG------------------
