>input_sequence_40830
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------------------------------------------------------ATGGCCGTCAAGCCCAAACCCGCAAC
CTCCGCTTGCCTCGCCGCCGCCGTCCATGGAGACCTCCAAATCGCCGGCGCGGCCCTTCTCGCCGCCGCGGGAGCCCTCC
GCGGCGACGGTGCTGCTGTGCCCTTGCCTGGTGCTCCTCATCCTCGCCCTCATCGCCACATCCATCGCCCTCACGGTCCA
CTTCCGCCTCTATTGCCACTCCCCTGTCGGCCACCTCATCTCCCCCCACCGCTGCCCGCGCCACATCTGACCTGCGGCGC
AAGCAACCTCCGGGGCGAGGGTGCGGGCGCGGGCCTGCTACCCAGTCGTGCGCTACCTCTACTTTCAGCGAGATCCCGTT
TCCTCCCCGCCTCGTCGCCGGCATGGGGGACCGACGCGCCGTTCCGACTCGCTGGGTCAAGATGCCTCTCGACCTCCTCG
TCCTCCGCCTCGGAAGACGACGACGAGGGGGTCTCGCCGCCGCAGGTGCCGTCGAGCCACCCGGAGCACGTGGGCCGCTT
GTGCGCCGCCATCGCGGACGTCATCACCGCTGGCGCCGACGCGAACCTGGAAGCAGCGCTCTCCGCGCTGTCGCTGCCGC
TCTCCGAGGTGCTCGTGATTGCTGTCCTCGACCGATTCAATCACGCACACAAGGCATCACGCCGCTTCTTCCAGTGGGCC
GCCGCATCTGGGGGGTTCGCACACACACCCGTCACCTACTGCAAGATGCTGCACATCCTTGGCAAGGCGAGGCAGTTCGA
GACGATGGTTGCACTAGTCCATGAAATGGGGAAGGCAGGCGCCCTTTGCATGGACGCCTTCAAGATTTCCATCAAGTCGT
TCGCCGCCGCTGGTGAGATCAAGAATGCAGTTGGTGTGTTCGAGATGATGAGGGTGCACGGCTTTGATGATGGGGTGGAG
TCGTTCAATTGCTTGCTATTCGCTTTGGCCCATGAGGCGCTGGGGAAGGAGGCAGCTCAGGTGTTCAGCAGAATGCATGA
CCGGTACACTCCGGACTTGCGCTCATACACAGCCATGTTGATGGCATGGTGCAATGGAAAGAACCTGGTGGAGGCTGGGC
GGGTTTGGAATGAGATGCTGGAGAAGGGGATGAAGCCAGACGTTGTCGTGCACAACACAATGATTGAGGGGTTGCTTCGT
GGGCAGAGGCGGCCTGAGGCTGTGAAGATGTTTGAGCTGATGAAGGCAAAGGGGCCTCCCCCAAATGTGTGGACTTACAC
AATGTTGATTCGAGACCATTGTAAGCGGGGAAAGATGGACATGGCAATGCGGTGCTTTGAGGAGATGCAGAAGGGTGGGT
GCCAGCCGGATGTTGCTACCTATACGTGCTTGCTTGTGGGATATGGGAATGCAAGGCGAATGGATAGAGTGACTGCGATG
TTGGAAGAAATGGCACAGAAGGGGTGCCCCCCTGATGGCCGAACGTACAATGCACTGATTAAGCTGCTCAAGAACAGGAA
TATGCCAGATGATGCAGTAAGGATATACAAAAAGATGATAAATAAGGGGCTTGAACCCACTGTCCATACGTACAACATGA
TGATGAAGTCGTATTTCCTTGGCGGGAGGAACTATGCAATGGGTTGCTCAGTGTGGGATGAGATGCATCGGAAGGGGATT
TGTCCTGATGTGAACTCATACACTGTGTTTATTAATGGTCACATACGACATGGCAGACCTGAGGAAGCATGTAAATTTAT
CGAAGAGATGATCCAGAAAGGGATGAAGGCTCCACAAATAGACTACAACAAATTTGCTGCAGACTTCTCCAAGGCTGGGA
AGCCGGACATATTGTTTGAATTAGCTCAGAAGGTGAAGTTTACAGGGAAATCTGATGAATCTAATGTGTTCCATCAGTGG
GGAGAGAGAATGAGAAGTCGGGTCAAGCAGACTGTCCCTAATCAGACTAGGAGCAGGACGTTGTAA--------------
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>chr1A_1_TraesCS1A01G225600
CTCATTGGTCTCGCTTCATTGACCATGGTGAGGCGGCGGTGATGATGGCATGACCATGGTGGCACATGTCGGTGGGCGAC
ATGATTGGTGGAGCTTGTCGGACCATTCGAGGATGTGGGTGTTTGGCGGACGGGAGAAATGCCTGCCGGCTTGCCGGCAC
CGACGCGGTGACGCCCGTGGGCGCCACCATTCCTTCCTGAAGGGCGTAGGGTATTCCCCTTCCCCACGCCCCTCCGCATA
CCGGGGGAAACCCTAGGATCTGTCCGGGCAGCAGCGGCGTCTTC---ATCGTATTCCTTCCTGAAGGTGTTGCTTGGTAT
GCGGAGGTTCGAGGCGCTAGGAGCGAGGTGGTAA-TCTTCGGTGGGCGAGGCGGTTGCGGGTGATCATCATTTTCGTCGA
TCTGACGTTGTTGACATTA-TTTTCTCTCTTCTTTCTCTTTTGTTTCTTTTGGGCATGCTTGTGATGTATGCCCCAGTAG
TGAACTCTTTGTTGTATCGGGTGGTTGCTATGTCTATATAGCGGGGCGAAAGCCTATTTCGTCAATCTAAGGAGTAAAGA
CACATTTGTGAAGCTGAAGTGCGTAAAGAATAGCAACTTATATGTCATTTGTATCACTAGAATGGCTATTTATTCAGTTA
ATT-TTTTTTATTTGTTGAGGAGGCGAAGATGGCAGGTGAAGAAGAAGAAAAAAAAGAGTGATTTATAAGGTT-AAAAAA
AGTCGATGATGATGTCTCATGTGCATAATAAGCATCCTAAAGGATATCATTGGTGTTTAAACACTAGATGTGCATGCACG
GGCACTGACCTAG--TTTTTTTAGAAAACTTCTACTATGACTGGTGCTATTTAATCAATGAAGAGCCGTATTTGACT-AA
AAA--AAACTACCACCATAAAACCAAAATGGGCCAACTCTACTAAGACGCAGAATGGTTTTTAACGGACCCAGCCCAGTG
GAGACGACAACAAAACCATACTACCACGGTCCT--GCTAACCCAACATTATTCCATGGCCGTCAAGCCCAAACCCGCAAC
CTCCGCTTGCCTCGCCGCCGCCGTCCATGGAGACCTCCAAATCGCCGGCGCGGCCCTTCTCGCCGCCGCGGGAGCCCTCC
GCGGCGACGGTGCTGCTGTGCCCTTGCCTGGTGCTCCTCATCCTCGCCCTCATCGCCACATCCATCGCCCTCACGGTCCA
CTTCCGCCTCTATTGCCACTCCCCTGTCGGCCACCTCATCTCCCCCCACCGCTGCCCGCGCCACATCTGACCTGCGGCGC
AAGCAACCTCCGGGGCGAGGGTGCGGGCGCGGGCCTGCTACCCAGTCGTGCGCTACCTCTACTTTCAGCGAGATCCCGTT
TCCTCCCCGCCTCGTCGCCGGCATGGGGGACCGACGCGCCGTTCCGACTCGCTGGGTCAAGATGCCTCTCGACCTCCTCG
TCCTCCGCCTCGGAAGACGACGACGAGGGGGTCTCGCCGCCGCAGGTGCCGTCGAGCCACCCGGAGCACGTGGGCCGCTT
GTGCGCCGCCATCGCGGACGTCATCACCGCTGGCGCCGACGCGAACCTGGAAGCAGCGCTCTCCGCGCTGTCGCTGCCGC
TCTCCGAGGTGCTCGTGATTGCTGTCCTCGACCGATTCAATCACGCACACAAGGCATCACGCCGCTTCTTCCAGTGGGCC
GCCGCATCTGGGGGGTTCGCACACACACCCGTCACCTACTGCAAGATGCTGCACATCCTTGGCAAGGCGAGGCAGTTCGA
GACGATGGTTGCACTAGTCCATGAAATGGGGAAGGCAGGCGCCCTTTGCATGGACGCCTTCAAGATTTCCATCAAGTCGT
TCGCCGCCGCTGGTGAGATCAAGAATGCAGTTGGTGTGTTCGAGATGATGAGGGTGCACGGCTTTGATGATGGGGTGGAG
TCGTTCAATTGCTTGCTATTCGCTTTGGCCCATGAGGCGCTGGGGAAGGAGGCAGCTCAGGTGTTCAGCAGAATGCATGA
CCGGTACACTCCGGACTTGCGCTCATACACAGCCATGTTGATGGCATGGTGCAATGGAAAGAACCTGGTGGAGGCTGGGC
GGGTTTGGAATGAGATGCTGGAGAAGGGGATGAAGCCAGACGTTGTCGTGCACAACACAATGATTGAGGGGTTGCTTCGT
GGGCAGAGGCGGCCTGAGGCTGTGAAGATGTTTGAGCTGATGAAGGCAAAGGGGCCTCCCCCAAATGTGTGGACTTACAC
AATGTTGATTCGAGACCATTGTAAGCGGGGAAAGATGGACATGGCAATGCGGTGCTTTGAGGAGATGCAGAAGGGTGGGT
GCCAGCCGGATGTTGCTACCTATACGTGCTTGCTTGTGGGATATGGGAATGCAAGGCGAATGGATAGAGTGACTGCGATG
TTGGAAGAAATGGCACAGAAGGGGTGCCCCCCTGATGGCCGAACGTACAATGCACTGATTAAGCTGCTCAAGAACAGGAA
TATGCCAGATGATGCAGTAAGGATATACAAAAAGATGATAAATAAGGGGCTTGAACCCACTGTCCATACGTACAACATGA
TGATGAAGTCGTATTTCCTTGGCGGGAGGAACTATGCAATGGGTTGCTCAGTGTGGGATGAGATGCATCGGAAGGGGATT
TGTCCTGATGTGAACTCATACACTGTGTTTATTAATGGTCACATACGACATGGCAGACCTGAGGAAGCATGTAAATTTAT
CGAAGAGATGATCCAGAAAGGGATGAAGGCTCCACAAATAGACTACAACAAATTTGCTGCAGACTTCTCCAAGGCTGGGA
AGCCGGACATATTGTTTGAATTAGCTCAGAAGGTGAAGTTTACAGGGAAATCTGATGAATCTAATGTGTTCCATCAGTGG
GGAGAGAGAATGAGAAGTCGGGTCAAGCAGACTGTCCCTAATCAGACTAGGAGCAGGACGTTGTAAGATTAAGATGTTTG
TAATGGTGTTTGGAA-TTTTAGAATGTGCTCCTGCTATTTATGAAAGAGGTGCTGTAGTTTCTCTGATGTTGTATAGTAC
TCCCTCCGTCCGGAAATACTTGTCCTAGAAATGGTATTTCCGGACGGAGGGAGTAATACTTTATTGAAGATTATGTCTCC
TGTTTGTTAGACCCAAAATATGCACCAAGTCATGATTAAGTTCTAGTTTCTGTGAAACTCAGGTGTACTGCACATCAAAG
CATCA-----------CTCTGCAATTGTTTTGTAGGTACTGTAGTGGCCTAGTATGCACCTTCCATTGGATCAATCATAT
CTTTCTATCTTGCAGTGGCTCGACCACATCTTCCAATTTAATGATCTTAGATGCTTATGGTTGTGCTTGTTAAGCAGTAT
TAGTATTTAGACTAATACGGACCCCTAGATCGATACTGATACTCCTTAACAGTGTGATGCTGATATGTAGGCTTAGACAT
TGGAACCAGCTGGAACTTAAGGGCTACGTGCACCTGCTTGATGTCACCTAGCAATTTACACCCTTTTGAGTTTGAAGATA
ACAAAATTCATCAAACAAGTTGACTTTGTCGTTTTGGGTGCACGTTCATTGCATATTCTGTAGAGAAATATATAACCAAA
TTATATGTAGCTTGATGGATACCTATGCATGCATGCTTGTAGCCTTGTAGAAAGTTAGAAATAATGCATGCTTAAGGTGT
CATCATGGTGTTTGATGGAAGTTCTTTGTCGATGCTATCCTGTAGCGAAATATGAGCCACTGTGACAAAAATTATTGCCA
CATGGTCCATACACTGCTCATATTTATTGAGTCCACTCTAATACAGTGATTCGAGTCCCAGTATTACTCCTGTGAGTATG
ATTTTGTCTAGTTTTCTGCATTACTATCTCTTGTCGTAAATTTCTATCAAAGTGCCTTTTGCAAAGTAAAGCACCCCGAC
AAACCTATGGTCTTTCTGACAGGAACTGTTTCACATTA
>chr1B_1
CTCGTCGGTATCGCTTTGTTGACCATGGTGAGGCGATAGTGATGATGGCAAGACCATGGTGGCACATGTTGATGGGCGAC
ATGATTGGTGGAGCGCGTCGAACCATTCGGGGATGTGGGTGTTTGGTGGACGGGAGAAATCCTTGTCGGCTTGCCGGCAC
CGATGTAGTGACGCCTGTAGGCGCCACCGTTCCTTCCTGAAGGGCGTGGGGAATTCCCCTTCCCCACGCCCCTTCGCGTA
CCGGGGAAAACCCTAGGACCCGTCCATGTAGCAGCATTGCCGTC---ATCGTCTTCCTTCCTGAAGGTGTTGCTTGGTAT
GTGGAGGTTCGAGGTGCCAGGAGCGAGGTGGTAAATCTCCAGTGGGCGCAGCGGTTGCGGGTCATCATCCTTTTCGTCGA
TCCGACGTTGTTGACATTA-TTTTCTCTCTTCTTTCTCTGTTGTTTCTTTTCGGTGTGCTTGTGCTGTTTGCCCCAACAT
TGGATTCTTTGTTGTATCGGGTGGTTGCTATGTCTATATAGCGGGACGAAAGCCTATTTC--------------------
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>chr5D_1
CTCGTCGGTCTCGCTTCGTTGACCATGGTGAGGCGGCGGTGATGATGGCAAGACCGTGGTGGCGCATGTTGGTGGGCGGC
ATGAGTGGTGGAGCGCATCGGACCATTCGGGGATGTGGGTGATTGGTGGAGGGGAGAAATCCCTGCCGGCTTGTCGGCAC
CGA-GCGGTGACGCCTG-AGGCGCCACCGTTCCTTCCTGAAGGGCGTCGGGTATTCCC-TTCCCCACTCCCCTCCGTGTA
CCAGGGGAAACCCTAGGACTTGTCCGGGCAGCAGCGTCGTCGTC---GTCGTGTTTCTTTCTGAAGGTGTTGCTTGGTAT
GCGGAGGCTCGAGGTTCTAGGTGCGAGGAGGTAAATCTCTGGTGGGCGTAGCGGTTGCGGGTCATCATCGTTTTCGTCGA
TCCGACGTTGTCGACATTT-TTTTCTCTCTTCTTTCTCTTTTGTTTCTTTTGGGCGTGCTTGTGTTGTTTGCCCCAGCCT
TGGACTCTTTGTTGTATCAGGTGGTTGCTATATCTATATAGCGGGGCGAAAGCCTATTTCGTAAT---------------
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>chr2D_1
CTCGTCGGTCTCGCTTCATTGACCATGGTGAGGCGGCGGTGATGATGGCAAGACCGTGGTGGCGCATGTTGGTGGGTGGC
ATGAGTGGTGGAGCGCATCGGACCATTCGGGGATGTGGGTGATTGGTGGAGGGGAGAAATCCCTGCCGGCTTGTCAGCAT
CGACGCGGTGACACCTGTATGTGCCACCGTTCCTTCCTGAAGGGCGTCGGGTATTCCCCTTCCCCACGCCCCTCCGTGTA
CCGAGGGAAACCCTAGGACTTGTCCGGGCAGCAGCGTCGTCGTC---GTCGCGTTCCTTCCTGAAGGTGTTGCTTGGTAT
GCGGAGGTTCGAGATGCTAGGTGCGAGGTGGTAAATCTCCGGTGGGCGCAGCGGTTGCGGGTCATCATCATTTTCGTCGA
TCCGACGCTGTCAACATTT-TTTTCTCTCTTCTTTCTTTTTTGTTTCTTTTGGGCGTGCTTGTGTTGTTTGCCCCAGCAT
TGGACTCTTTATTGTATCGGGTGGTTGCTATATCTATATAGCGGGGCGAAAGCCTATTTCGT------------------
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>chr3A_1
CTCGTCGGTCTCGCTTCGTTGACCATGGTGAGGCGGCGGTGATGATGGCAAGACCGTGGTGGCGCATGTTGGTGGGCGAC
ATGAGTGGTGGAGCGCATCGGACCATTCGAGGATGTGGGTGATTGGTGGAGGGGAGAAATCCATGCCGGCTTGTCGGCAC
CGACGCGGTGACGCCCGTGGGCGCCACCGTTCCTTCCTGAAGGGCGTCGGGTATTCCCCTTCCCCACGCCCCTCCATGTA
CCGGGGGAAACGTTAGGACTTTTCCGGGCAGCAGCGTCGTCGTT---GTCGTGTTCCTTTCTGAAGGTGTTGCTTGGTAT
GCGGAGGTTCGAGATGCTAGGTGTGAGGTGGTAAATCTCCGGTGGGCGCAGCGGTTGCGGGTCATCATCGTTTTCGTCGA
TCCGATGTTGTCAACA-TT-TTTTCTCTTTTCTTTCTTTTTTGTTTCTTTTGGGTGTGCTTGTGCTGTTTGCCCCATCAT
TGGACTCTTTGTTGTATAGGGTGCTTGCTATATCTATATAGCGGGGCGAAAGCCTATTTCGT------------------
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>chr5B_1
CTCGTCGGTCTCGCTTCGATGACCACGGTGAAGCGGCGGTGATGATGGCAAGTCCGTGGTGGCGCACGTTCGTGGGTGGC
TTGTCTGGTGGTGCGCGTCGGACCGTTCGGGGTTGTGGGTGTTTGGCGGATGGGAGAAATTCGGGCCGGCTTGCCGGCAC
CGACGCGGTGACGCCCGTGGGCGCCATCGTTCCTTCCTGAAGGGCGTCGGGTCTTCCCCTTCCCCACGCCCCTCCGCGTA
CCGGAGGAAACCCTAGGACCTGTCCGGGCAGCAGCGTCGTCGTCATCGTCGTGTTCCTTCCTGAAGGTGCTGCTTGGTAT
GCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTACATCTCCGGTGGGCGCAACGGTTTTGGGTTATCATCGTTTTCGTCGA
TCCGACGTTGTGGACA-TTATTTTCTCTCTTCTTTCTCTTTTGTTTCTTTTGGGCATGCTTGTGCTGTTTGCCCCAGCAT
TGGACTCTTTGTTGTATCGGGCGGTTGCTATATCAATATAGCGGGGCGAAAGCCTTTTTCGT------------------
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>chr1D_7
------GGTCTCGCTTCGATGACCATGGTGAGGCGGCGGTGATGATGGCAAGACCGTGGTGGCGCACGTTCGTGGGTGGC
TTGTCTGGTGGAGCGCGTCGGACCGTTCGGGGTTGTGGGTGTTTGGCGGATGGGAGAAATCCGTGCCGGCTTGCCGGCAC
CGACGCGATGACGCTCGTGGGCGCCATCGTTCCTTCCTGAAGGGCATCGGGTCTTCCCCTTCCCCACGCCCCTCCGCGTA
TCGGGGGAAACCCTAGGACCTGTCCGGGCGGCAGCGTCGTCGTC---GTCGTGTTCCTTCCTGAAGGTGCTGCTTGGTAT
GCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTACATCTCCGGTGGGCGCAACGCTTTCGGGTTATCATCGTTTTCGTCGA
TCCGACGTTGTTAACA-TTATTTTCTCTCTTCTTTCTCTTTTGTTTCTTTTAGGCATGCTTGTGCTGTTTGCCCCAGCAT
TGAACTCTTTATTGTATCGGGCGGTTGCTATATCTATATAGCGGGGCGAAAGCCTTTTTCTCA-----------------
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>chr5D_7
------GGTCTCACTTCGTTGACCATGGTGAGGCAGCGGTGATGATGGCAAGATCGTGGTGGCGCATGTTGGTGGGCGGC
ATGATTGGTGGAGCACGTCGGACCATTCGGGGATGTGGGTGTTTGGTGGACGGGGAAAATCCCTGCCGGCGTGCCGGCAC
CTACGCGGTGACGCCCGTGGGCGCCACCGTTCCTTCCTGAAGGGCGTCTGGTATTCCCCTTCCCCACGCCCCTCCGCGTA
CCGGGGGAAACCCTAGGACTTGTCCAGGCAGCAGCATCATCGTC---ATCGTGTTTCTTCCTGAAGGTGTTGCTTGGCAT
GCAGAGGTTCGAGGTGCTAGGAGTGAGGTGGTAAATCTCCGGTGGGCGCAGCGGTTGCGGGTCATCATCGTTTTCGTCGA
TCCGACCTTGTTGACA-TTATTTTCTCTCTTCTTTCTTTTTTGTTTCTTTTGAGCGTGCTTGTGTTGTTTGCCCCAGCAT
TGGACTCTTTGTTGTATCAGGTGGTTGCTATATCTATATAGCGGGGCGAAAGCCTATTTCGTAAT---------------
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>chr2D_7
------GGTCTCGCTTCGATGACCATGGTGAGGCGGCGGTGATGATGGCAAGATCGTGGTGGCGCACGTTCATGGGTGCC
TTGTCTGGTGGAGCGCGTCGGACCGTTCCGGGTTGTGGGTGTTTGGCGGATGGGAGAAATCCGTGCCGGCTTGCCGGCAC
CGACGCGGTGACGCCCGTGGGCGCCATCGTTCCTTCCTGAAGGGCGTCGGGTCTTCCCCTTCCCCACGCCCCTTCGCGTA
CCGGGGGAAACCCTAGGACCTGTCCGGGCAGCAGCTTCGTCGTC---GTCGTGTTCCTTCCTGAAGGTGCTGCTTGGTAT
GCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTACATCTCCAGTGCGGGCAACGGTTTCGGGTTATCATCGTTTTCGTCGA
TCTGACACTGTTAACA-TTATTTTCTCTCTTCTTTCTCTTTTATTTCTTTTGGGCATGCTTGTGTTGTTTGCTCCAGCAT
TGAACTCTTTGTTGTATCGGGCGGTTGCTATATCTATATAGCGGGGCGAAAGCCTTTTTCTCAA----------------
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>chr6D_7
------GGTCTCGCTTCGATGACCACGGTGAGGCGGCGGTGATGATGGCAAGTCCATGGTGGCGCACGTTCGTGGGTGTC
TTGTCTGGTGGTGCGCGTCGGACCGTTCGGGGTTGTGGGTGTTTGGCGGATGGGAGAAATCCGGGCCGGCTTGCCGGCAC
CGACGCGGTGACGCCCGTGGGCGCCATCGTTCCTTCCTGAAGGGCGTCGGGTCTTCCCCTTCCCCACACCCCTCCGCATA
CCGGGGGAAACCCTAGGACCCGTCCGGGCAGCAGCGTCGTCGTC---GTCGTGTTCCTTCCTGAAGGTGCTGCTTGGTAT
GCGGAGGTTCGAGGTGCCTGGAGCGAGGTGGTACATCTCCGGTGGGCGCAACAGTTTTGGGTTATCATCGTTTTCGTCGA
TCCGACGCTGTGGACA-TT-TTTTCTCTCTTCTTTCTCTTTTGTTTCTTTTGGGCATGCTTGTGCTGTTTGCCCCAGCAT
TGGACTCTTTATTGTATCGGGCGGTTGCTATATCAATATAGCGGGGCGAAAGCCTTTTTCGTTAATC-------------
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>chr1B_539
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---------------------------------------------------------------AATCTAAGGAGTAAGGA
CCCATTTGTGAAGTTGAAGTGCGTAAAGAATAGCAGCTTAT--GTCATTTATATCACTAGAATGGTTATTTATTCAGTTA
AAAGTTTGTTATTTATTGAGAAGGCGAAGATGACGGGTGAAGAAAAAGAAAAATGAAAGTGGTTTATAATGGTTAAAAGA
AGTTGGCTATGGTGTCTCATGTGCATAATAAGCATCTTAAAGGATATCATTGGTGTTTAAACACTAGATGTATATGCACG
GGCAATGACCTAGGTTTTTTTTAGAAAACTTCTA---TGACTGATGCTATTTACTCAACGAAGAGCCGTATTTGACTAAA
AAA--AAACTACCACCATAC-ACCAAAATGGGCCAACTCTTTTAAGACGCAGAATGGTTTTTAACGGACCCAGCCCAGTG
GAGATGGCAACAAAACCATACTACCACGCAGTGCCGCTAACCCAACATTATTCCATGGCCGTTAAGCCCAAACCCGCAAC
CTCCGCTTGCCTCGCCGCCGCCGTCCATGGAGACCTCAAAATCGCCGGCGCGGCCCTTCTCGCCGCCGCGGGAGCCCTCC
GCAGCGACGGTGCTACTGTGCCCTTGCCTGGTGCTCCTCATCCTCGCCCTCATCGCCACATCTATCGTCCTCACGGTCCA
CTTCCGCCTGTATTGCCACTCCCCTGTCGGCCACCTCGTCTCCCCCCACCGCTGCCCGCGCCACATCTGACCTCCGGCGC
AATCAACCTCCGGGGCGAGGGTGCGGGCGCGGGCCTGCTTCCCAGCCGCGCGCTACCTCTACTTTCAGCGAGATCCCGTT
CCCTCCCCGCTGCGTCGCTGGCGTGGGGGGCCGACGCTCCGTTCCGACTCGCTGGGTCAAGATGCCTCTCGACCTCCACG
TCCTCCGCCTCTGAAGACGACGACGAGGGGGGCTCGCCGCCTCAGGTGCCGTCGAGCCACCCGGAGCACGTGGGCCGCTT
GTGCGCTGCCATCGCGGACGTCATCACCGCAGGCGCCGACGCGAACCTGGAAGCAGCGCTCTCCGCGCTGTCGCTGCCGC
TCTCCGAGGCGCTCGTGATTGCTGTCCTCGACCGCTTCAAGCACGCACACAAGCCATCACGCCGCTTCTTCCAGTGGGCC
GCCGCATCTGGGGGGTTCGCACACACCCCCGTCACCTACTGCAAGATGCTGCACATTCTTGGCAAGGCGAGGCAGTTCGA
GACGATGGTTGCACTAGTCCATGAAATGGGGAAGGCAGGCGCCCTTTGCATGGACGCCTTCAAGATTTCCATCAAGTCGT
TTGCCGCCGCTGGCGAGATCAAGAATGCAGTTGGTGTATTCGAGATGATGAGGGTGCACGGCTTTGATGATGGGGTTGAG
TCCTTCAATTGCTTGCTATTCGCTTTGGCCCATGAAGGGCTGGGGAAGGAGGCAGCCCAGTTGTTCAGCAGAATGCATGA
CCGGTACACTCCGGACCTGCGCTCATACACAGCCATGTTGCTGGCATGGTGCAATGGAAGGAACCTGGTGGAGGCTGGGC
GGATTTGGAATGAGATGCTGGAGAAGGGGATGAAGCCAGACGTTGTTGTGCACAACACAATGATTGAGGGGTTGCTTCGT
GGGCAGAGGCGGCCTGAGGCTGTGAAGATGTTCGAGCTGATGAAGGCAAAGGGGCCTCCCCCAAATGTGTGGACTTACAC
AATGTTGATTCGAGACCATTGTAAGCAGGGAAAGATGGACATGGCAATGCGGTGCTTTGAGGAGATGCAGGAGGATGGGT
GCCAGCCAGATGTTGCTACCTATACGTGCTTGCTTGTGGGATATGGCAATGCAAAGCGAATGGATAGAGTGACTGCAACG
TTGGAGGAAATGGCACAGGAGGGTTGCCCCCCTGATGGCTGGACGTACAATGCGCTGATTAAGCTGCTCACTAATAGGAA
TATGCCAGATGATGCAGTAAGGATATACAAAAAGATGATAAATAAGGGGCTTGAACCCACAATCCATACATACAACATGA
TGATGAAGTCGTATTTCCTTGGCGGGAGGAACTATGCAATGGGCTGCGCAGTGTGGGATGAGATGCATCGGAAGGGGATT
TGTCCTGATGTGAACTCATACACTGTGTTTATTAATGGTCACATACGACACGGCAGACCTGAGGAAGCATGTAAATTTAT
CGAAGAGATGATCCAGAAAGGGATGAAGGCTCCACAAATAGACTACAACAAATTTGCTGCAGACTTCTCCAAAGCTGGGA
AGCCAGACATATTGTTTGAATTAGCTCAGAAGGTGAAGTTTACAGGGAAATTTGATGAATCTAATGTGTTCCATCAGTGG
GGAGAGAGAATGAGAAGTCGGGTCAAGCAAACTGTCCCTAACCAGACTAGGAGCAGGACATTGTAAGATTAAGATGTTTG
TAATGGTGTTTGGAATTTTTAGAATGTGCTCCTGCTATTTATGAAAGAGGTGCTATAGTTTCTCTGATGTTGTAT-----
---------------------------------------------------AGTAATACTTTATTGAAGATTATGTCTCC
TGTTTGTTAGACCCAAAATATGCACCAAGTCATGATTAAGTTCTGGTTTCTGTGAAACTCAGGTGAGCTGCACATCAAAG
CATCATTTACTAGTGCCTCTGCAATTGTTCTGTAGGTACCGTAGTGGCCTAGTATGCACCTTCCATTGGATCAATCATAT
CTTTCTATCTTCCAGTGGCTCAACCACATATTCCAATTTAATGATCTTAGATGCTTATGGTTGTGCTTGTTAAGCAGTAT
TAGTATTTAGACTAATACGGACCCCTAGATCGATACCGATACTCCTTAACAATGTGATGCTGATATGTAGGCTTAGACAT
TGGAACTAGCTGGAATTTAAGGGCTACATGCACCTGCTTGATGTCACCTAGCAATTTACACCCTTTTGAGTTTGAAGTTA
ACAAAAATCATCAAACAAGTTGAC--TGTTGTTTTGGGTGCACGTTCACTGCATATTCCGCAGAGAAATATATAACCAAA
TTATATGTAGCTTGATGGATACAT----ATGCATGCTTGTAGCCTTGTAGAAAGTTAGAAATAATGCATACTTAAGGTGT
CATCATGGTGTTTAGCGGAAATTCTTTGTTGATGCTATCTTGTAGCGAAATATGAGCCACTGTGACAAAAATTATTGCCA
CATGGTCCATACACTGCTCATATTTATTGAGTCCACTCTAATACAGTGATTTGAGTCCCAGTATCACTCCTGTGAGTACG
ATTTCGTCTAGTTTTCTGTATTACTATCTCTTGTCTTAAATTTCTATCGAAGTGCTTTTTGCAAAGTAAAGCACCCCGAC
AAACCTATGGTCTTTCTGACAGGAACTGTTTCACATTA
>chr1D_640
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-----TTGTTATTTATTGAGGAGGCGAAGATGACGGGTGAAGAAAAAGAAAAAGGGAAGTGATTTATAATGGT-AAAAGA
AGTTGGCGATGATGTCTCATGTGCATAATAAGCATCGTAAAAGATATCATTGGTGTTTAAACACTAGATGTATATGCACG
GGCAATGGCCTAT-TTTTTTTTAGAAAACATCTA---TGACTGATGCTATTTAATCAATGAAGAGACGTATTTGACTTAA
AAAAGAAACTACCACCATAC-ACCACAATGGGCCGACTCTTTTAAGACGCAGAATGGTTTTTAACGGACCCAGCCCAGTG
GAGATGGCAACAAAACCATACTACGCG---GTGCCGCTAACCCAACATTATTCCATGGCCGTCAAGCCCAAACCCGCAAC
CTCCGCTTGCCTCGCCGCCGCCGTCCATGGAGACCTCAAAATCGCCGGCGCGGCCCTTCTCGCCGCCGCGGGAGCCCTCC
GCGGCGACGGTGCTGCTGTGCCCTTGCCTGGTGCTCCTTATCCTCGCCCTCATCGCCACATCTATCGCCCTCACGGTCCA
CTTCCGCCTCTATTGCCACTCCCCTGTCGGCCACCTCATCTCGCCCCACCGCTGCCCGCGCCACATCTGACCTCCGCCGC
AATCAACCTCCGGGGTGAGGGTGCGGGCGCGGGCCTGCTTCCCAGCCGCGCGCTACCTCTACTTTCAGCGAGATCCCGTT
CCCTCCACGCTGCGTCGCTGGCGTGGGGGGCCGACGCTCCGTTCCGACTCGCTGGGTCAAGATGCCTCTCGACCTCCACG
TCCTCCGCCTCTGAAGACGACGACGAGGGGGGCTCGCCGCCGCAGGTGCCGTCGAGCCACCCGGAGCACGTGGGCCGCTT
GTGCGCCGCCATCGCGGACGTCATCACCGCTGGCGCCGACGCGAACCTGGAGGCAGCGCTCTCCGCGCTGTCGCTGCCGC
TCTCCGAGGCGCTCGTGATTGCTGTCCTCGACCGATTCAATCACGCACACAAGCCATCCCGCCGCTTCTTCCAGTGGGCC
GCCGCATCTGGGGGGTTCGCACACACACCCGTCACCTACTGCAAGATGCTGCACATCCTTGGCAAGGCGAGGCAGTTCGA
GACGATGGTTGCCCTAGTCCATGAAATGGGGAAGGCAGGCGCCCTTTGCATGGACGCCTTCAAGATTTCCATCAAGTCGT
TCGCCGCCGCCGGCGAGATCAAGAATGCAGTTGGTGTGTTCGAGATGATGAGGGTGAACGGCTTTGATGATGGGGTGGAG
TCGTTCAATTGCTTGCTATTCGCTTTGGCCCATGAGGGGCTGGGGAAGGAGGCAGCTCAGGTGTTCAGCAGAATGCATGA
ACGGTACACTCCGGACTTGCGCTCATACACAGCCATGTTGATGGCATGGTGCAATGGAAAGAACCTGGTGGAGGCTGGGC
GGGTTTGGAATGAGATGCTGGAGAAGGGGATGAAGCCAGACGTTGTCGTGCACAACACAATGATTGAGGGGTTGCTTCGT
GGGCAGAGGCGGCCTGAGGCTGTGAAGATGTTTGAGCTGATGAAGGCAAAGGGGCCTCCCCCAAATGTGTGGACTTACAC
AATGTTGATTCGAGACCATTGTAAGCGGGGAAAGATGGACATGGCAAAGCGGTGGTTTGAGGAGATGCAAGAGGATGGGT
GCCAGCCGGATGTTGCTACCTATACGTGCTTGCTTGTGGGATATGGCAATGCAAAGCGAATGGATAGAGTGACTGCAATG
TTGGAGGAAATGGCACAGAAGGGATGCCCCCCTGATGGCCGAACGTACAATGCGCTGATTAAGCTGCTCAAGAATAGGAA
TATGCCAGATGATGCAGTCAGGATATACAAAAAAATGATAAATAAGGGGCTTGAACCCACGATCCATACATACAACATGA
TGATGAAGTTGTATTTCCTTCGTGGGACGAACTATGCAATGGGTTGCGCAGTGTGGGACGAGATGCATCGGAAGGGGATT
TGTCCTGATGTGAACGCATACACTGTGTTTATTAATGGTCACATACGACACGGCAGACCTGAGGAAGCATGTAAATTTAT
CGAAGAGATGATCCAGAAAGGGATGAAGGCTCCACAAATAGACTACAACAAGTTTGCTGCAGACTTCTCCAAGGCTGGGA
AGCCGGACATATTGTTTGAATTAGCTCAGAAGGTGAAGTTTACAGGGAAATTTGATGAATCTAATGTGTTCCATCAGTGG
GGAGAGAGAATGAGAAGTCGGGTCAAGCAGGCTGTCCCTAATCAGACTAGGAGCAGGACGTTGTAAGATTAAAGA-----
------TGTTTGTAA-TTTTAGAATGTGCTCCTGCTATTTATGAAAGAGGTGCTATAGTTTCTCTGATGTTGTAT-----
---------------------------------------------------AGTAATACTTTATTGAAGATTATGTCTCC
TGTTTGTTAGACCTAAAATCTGCCCCAAGTCATGATTAAGTTCTAGTTTTTGTGAAACTCAGGTGAGCTGCACATCAAAG
CATCATTTACTAGTGCCTCTGCAATTGTTTTGTAGGTACCGTAGTGGCCGAGTATGCACCTTACATTGGATCAATCATAT
ATTTCTATCTTCCAGTGGCTCAACCACATCTTCCAATTTAATGATCTTAGATGCTTATGGTTGTGCTTGTTAAGCAGTAT
TAGTATTTAGACTAATATGGACCCCTAGACCGATACTGATACTCCTTAGCAGAGTGATGCTGATATGTAGGCTTAGACAT
TGGAACTAGCTGGAACTTAAGGGCTACATGCACCTGCTTGATGTCACCTAGCAATTTACACCCTTTTGAGTTTGAAGTTA
ACAAAAATCATCAAACAAGTTGACTTTGTTGTTTTGGGTGCACGTTCACTGCATATTCCGCAGAGAAATATATAACCAAA
TTATATGTAGCTTGATGGATGCAT----ATGCATGCTTGTAGCCATGTAGAAAGTTAGAAATAATGCATGCTTAAGGTGT
CATCATGGTGTTTAGCGGAAGTTCTTTCTCGATGCTATCTTGTAGCGAAATATGAGCCACTGTGACAAAAATTATTGCCA
CATGGTCCATACATTGCTCATATTTATTGAGTCCACTCTAATACAGTGATTTGAATCCCAGTATCACTCCTGTGAGTACG
ATTTCGTCCAGTTTTCTGCATTACTATCTCTTGTCTTAAATTTCTATCGAAGTGCTTTTTGCAAAGTAAAGCACCCCGAC
AAACCTATGGTCTTTCTGACAGGAACTGTTTCACGTTA
>SNPs
---S-S--------------------------------------------S------------------S----------
--------------SS--------------------------------------------S-------------------
----------------------------S------------------S--------------------------------
------------------S-----------------S----S----------S---------------------------
--------------S-----------------------S---------SS------------S-----------------
----------------------------------------------------------------S---S--------S-S
--------------------------------------------------------------S--------------S--
-S-----------S---------------------S-----SS-------S--------------S--------------
-SS----S------S-----------------S-S---------S--------SS-S------------S-S------S-
---S-SS-----------------------------S----------------------------------SS-------
----S-----------------------------SSS------S------------------------------------
-------------------SS-------------------SS--------------------------------------
----S-S---------------------SSSSS-----------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------S-----------------
-------------------------------------------------------------------------S------
--S------------------------------------S-----S--S-------------------------------
S---------SS------S---S------S-------S---------------------------------------S--
-----------S-------------------S------------------------------------------------
--------------------------------------------------------------------------------
---------S-------------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---S-----
----------------------------------------------S-------S---------------------S---
-----S-----------------S-----------------------------S--------------------S-----
------------------------------------------------------------SS-------S----------
-----------------------------------------------S--------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S--------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
-----------------------------------------------------------------SS-------------
---------------------------------------S----------------------------------------
-----------S---------S----------------------------------------------------------
--------------------------------------------------------------------------------
------S--------------------S-------------------------------------------------S--
------S----------------------S------------------S---------S-S-------------------
----------------------S-SSSS----------------------------------------------------
-------------SSS-----------------------S----------------------------------------
---------------------------------------------------S------------S-------------S-
----S------------------------------S------------S------S------------------------
--------------------------------------
>forward_673
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-------------TGTTGAGGAGGCGAAGATGG-----------------------------------------------
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>reverse_1610
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---------TGCTCGTGATTGCTGTCCTC---------------------------------------------------
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>forward_1438
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----------------------------------------------------------AAGATGCCTCTCGACCTCCT--
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>reverse_3038
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-----------------------------------------------------------------------------TAC
TCCCTCCGTCCGGAAAT---------------------------------------------------------------
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--------------------------------------
