>input_sequence_40782
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----------------ATGAGATGGCCTGCAAACCAGACTGCTCTAAACACCTTTTGTGGTTAGTTCAGTATACTTTACG
ATG------------TTTTGGCAGGAGTAATGTTTGTGTGTGTTTAATCACATGTCAAGTGATGTCCAGCTTCAGATTCT
TGCGCCCCCAGATACAAGCCAAACAGAACGGGCCTCCACAGG-----CCTCGTGCACAAAGCTCGATCATGGCCACAGCG
GCGGCGAGGTTAATCATCGCCTGCCTCAACGTCGCCTTCTTGCTCCTGGCCGCCTTCTTCTGCGTCTCGCGCCCCGCCGT
GCCGCGGGATTCGGCGGCGTCCATGAACGGCTGGAGCGTCCTCCTCCTCGATCGCGAGGGGCGCGGCGATGGCAGCGGCT
GCGACGGTGCTCGCCGGCGGCTGGAGGCTGACAAGGACGGGTGCGGCTACGACGCCGCTA---CATCGTTAGTTGCCGGC
CGGTGCTACCCGCGGGGACGGGGCTACGTCGATTACCTGTACCTGTTCTACTGCGTCTGTGGCGACGAGCACCGGGCCCT
TGGGTACGCCGCGATGGCCGCGTGGCTCGCCGTGCTCTTCTACGTCCTGGGCGACACCGCGGCGGTCTACTTCTGCTCCA
GCCTCGAGGGCCTCTCGCGGCTGCTCCGCCTGTCCCCGGCGGTGGCCGGCGTGACGCTCCTGTCGCTGGGCAACGGCGCG
CCGGACGCGCTCTCCACCGTCGCCTCCTTCGCGTCAGGGGGCA---GCGGGAAGGGGGCGAGCACCGCCGTGGGGCTCAA
CGGCTTGCTCGGCGGCGCGCTGTTCGTGTCCTCCGCCGTGCTCGGCGTCATCTGCCTCCGCATCGGCGGCCGTGGCGTCG
CCATCGACAGAGGCAGCTTCTTCCGGGACGCGTGCTTCCTCCTCGTCGCCCTCGCCGCCGTGGCCGTTGTCCTCGCCGCG
GGCGAGGTCAACATATGGGGCGCCCTCGCCTTCACCTCCCTCTACCTCGTATACGTCCTCGTCGTCGTCTTTATCCACGG
CAGATCGCGCGACGGAGAGGCAGAGGCGGCGTGGGTCGACAACACCCCCGCCTCGTCGGAGCTCTGCAACGTCGTGGAGA
CGGATTTTTA---CCCGGACCAAGAGCCGCTGCTCCCCGAAACGGCACCCCTCCTGCAGTACTACACCGGCGATGGCGAC
GGCGACAAAACGAAGAAGAAAAGGACCGTGTTCTGGTCGGTGGTGCGCGTGCTGGAGCTACCTCTGTACCTCCCGCGGCG
GCTGACCATACCGGACGCGAGCGAGGAGCGCTGGAGCAAGCCGGCCGCGGTCGCCGCGGCGACCCTTTCCCCTGTCTTCC
TCTCTTGCCTCTGGAGCCACGCCACCGGGAGCCCGCTTCTCGTCGTCTTCCTCGGCAGCATCGCCGGCTTATCCCTGGGC
CTCCTCGCCTTCCTCAGCACGGACGCTGATGCACCGCCGACGAAATTTCTCTCGGCCTGGCTCGCCGGTGGGTTCGTCAT
GAGCGTGGCGTGGGAGTACGTCATCGCGAACGAGCTCCTCTCCCTTCTCGTGTCCGCCGGCCTGGTGCTGGGCGTGGATC
CGGCGACGCTGGGGATGACGGTTCTGGCATGGGGCAACTCGCTGGGCGACCTCATCGCGAACGTGGCCGTGGCCGTGGCG
GGGCGCCGCGGTGGAGCTCAGGTGGCCGTAGCTGGTTGCTACGGCGGGCCGGTCTTCAACGTCCTCGTGGGGCTGGGCCT
GTCTCTGTTGCTGTCTTGCTGGGTCGGGTACCCGAAGCCCGTAACGATACCCTGGGAGCCCAGGCTTTATCAGACGCTAG
GCTGGGTAGCGGCTGGGCTTTTGTGGGCCTTCGTCATGCTCCCAAGAAGGGGCATGAAGGTGGATAGGACGCTGGGCTTT
GGGCTCCTGGCCATATACTTGTGTTTCTTGTGTACTACTCCCTCCGTTTTTGCTTAA-----------------------
--------------------------------------------------------------------------------
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-----------------------
>chr2B_1_TraesCS2B01G135500
TAAAGAAGAAGAAAAATGAAATAGAAACTAAAACATAACCAAAATAAGAAATTTTTCTAATGTGAATGAATTATTTGTGT
TCATATTACCCATTAGGAAGAAAGAAAACAAAAAAAACTTTTAAACAA-----CTTACAACTTTGCACTTTTTTAATAT-
-----GTAAGAAATAAACATATAATAGTATGATTTTCACACTCTAATATAATGTACACACATGTTATATATCACTTGCAT
GTACACATTTTACACTCACCCAACATCACAAAAATACCCATGAAAAACGACTAAGAAAAAGAAAAAGGTAAAGCTAAAAA
AGCATAAAACATAAGAACAAGATGAAACATCGTCGGCCTATAAACAA---TCAACAGAAGGAAACACGAGTGCGCTTCAG
CCCAGTAAGGAATCTACTGACCCAAACCAGTGGCCAGTCGAAACTTTTGGCCCCAAACATGACAGCAGACACAACAG-AA
AGAAAAAAGAGCATGGATCTCCAAGCAGAAATTCAGTGCCTCAAAAAT--ACTAACCCAATTTTATTTTTCAGGCGAATT
ACACATAGCTAAATTG----AAAG-AAAGAACATCTCACTGCGCCAGATCTGGAAATTAAAACATGTCACTGCTCGCAAC
TACCCGCTGGTCCCTG-----------ACGTGCTCTAATGCCTCCACGCTCATTATTGTTTTTTGTCGCGAGGGCAATGA
ATCGGTGGAGGTTGCTGCCTGCCATCAAGATGGGGCGTGCGTCGACCTCACTCAGCTACACTTGGAACAATGGATGCAAG
TCC-AACTTGCGGCCAGGAAGCGCCGAGCCAGGAGAGGATAACA----CCACAC--CCTGCGATTGACCGTCCTTAATTT
GGTTCTTCTTCGATCAACCAACCAACACG---------TATGCTCTTTCAC-GTTGCATTCTTCATGTCGCCACGCAATC
TCTCTAATTACATGGCTTGGCTGCTTCTTAATTAGGCTGGGTGAAGCTTTTCCCTAATCTCGCAAGAAACTTTTGGCTTT
GTTCTTTC------TCATGAGATGGCCTGCAAACCAGACTGCTCTAAACACCTTTTGTGGTTAGTTCAGTATACTTTACG
ATG------------TTTTGGCAGGAGTAATGTTTGTGTGTGTTTAATCACATGTCAAGTGATGTCCAGCTTCAGATTCT
TGCGCCCCCAGATACAAGCCAAACAGAACGGGCCTCCACAGG-----CCTCGTGCACAAAGCTCGATCATGGCCACAGCG
GCGGCGAGGTTAATCATCGCCTGCCTCAACGTCGCCTTCTTGCTCCTGGCCGCCTTCTTCTGCGTCTCGCGCCCCGCCGT
GCCGCGGGATTCGGCGGCGTCCATGAACGGCTGGAGCGTCCTCCTCCTCGATCGCGAGGGGCGCGGCGATGGCAGCGGCT
GCGACGGTGCTCGCCGGCGGCTGGAGGCTGACAAGGACGGGTGCGGCTACGACGCCGCTA---CATCGTTAGTTGCCGGC
CGGTGCTACCCGCGGGGACGGGGCTACGTCGATTACCTGTACCTGTTCTACTGCGTCTGTGGCGACGAGCACCGGGCCCT
TGGGTACGCCGCGATGGCCGCGTGGCTCGCCGTGCTCTTCTACGTCCTGGGCGACACCGCGGCGGTCTACTTCTGCTCCA
GCCTCGAGGGCCTCTCGCGGCTGCTCCGCCTGTCCCCGGCGGTGGCCGGCGTGACGCTCCTGTCGCTGGGCAACGGCGCG
CCGGACGCGCTCTCCACCGTCGCCTCCTTCGCGTCAGGGGGCA---GCGGGAAGGGGGCGAGCACCGCCGTGGGGCTCAA
CGGCTTGCTCGGCGGCGCGCTGTTCGTGTCCTCCGCCGTGCTCGGCGTCATCTGCCTCCGCATCGGCGGCCGTGGCGTCG
CCATCGACAGAGGCAGCTTCTTCCGGGACGCGTGCTTCCTCCTCGTCGCCCTCGCCGCCGTGGCCGTTGTCCTCGCCGCG
GGCGAGGTCAACATATGGGGCGCCCTCGCCTTCACCTCCCTCTACCTCGTATACGTCCTCGTCGTCGTCTTTATCCACGG
CAGATCGCGCGACGGAGAGGCAGAGGCGGCGTGGGTCGACAACACCCCCGCCTCGTCGGAGCTCTGCAACGTCGTGGAGA
CGGATTTTTA---CCCGGACCAAGAGCCGCTGCTCCCCGAAACGGCACCCCTCCTGCAGTACTACACCGGCGATGGCGAC
GGCGACAAAACGAAGAAGAAAAGGACCGTGTTCTGGTCGGTGGTGCGCGTGCTGGAGCTACCTCTGTACCTCCCGCGGCG
GCTGACCATACCGGACGCGAGCGAGGAGCGCTGGAGCAAGCCGGCCGCGGTCGCCGCGGCGACCCTTTCCCCTGTCTTCC
TCTCTTGCCTCTGGAGCCACGCCACCGGGAGCCCGCTTCTCGTCGTCTTCCTCGGCAGCATCGCCGGCTTATCCCTGGGC
CTCCTCGCCTTCCTCAGCACGGACGCTGATGCACCGCCGACGAAATTTCTCTCGGCCTGGCTCGCCGGTGGGTTCGTCAT
GAGCGTGGCGTGGGAGTACGTCATCGCGAACGAGCTCCTCTCCCTTCTCGTGTCCGCCGGCCTGGTGCTGGGCGTGGATC
CGGCGACGCTGGGGATGACGGTTCTGGCATGGGGCAACTCGCTGGGCGACCTCATCGCGAACGTGGCCGTGGCCGTGGCG
GGGCGCCGCGGTGGAGCTCAGGTGGCCGTAGCTGGTTGCTACGGCGGGCCGGTCTTCAACGTCCTCGTGGGGCTGGGCCT
GTCTCTGTTGCTGTCTTGCTGGGTCGGGTACCCGAAGCCCGTAACGATACCCTGGGAGCCCAGGCTTTATCAGACGCTAG
GCTGGGTAGCGGCTGGGCTTTTGTGGGCCTTCGTCATGCTCCCAAGAAGGGGCATGAAGGTGGATAGGACGCTGGGCTTT
GGGCTCCTGGCCATATACTTGTGTTTCTTGTGTACTACTCCCTCCGTTTTTGCTTAATTTAAAGGGTCCAACTCAAAAAA
AAAAATAGTATGAGTGGTAGAACAAATTTTGTACATTACAAAACTGTCCAATCAGCATGTCTTTTTTTCTCAAAAAAAGT
GTATTTGTCAGTGCTTTATTCTGCATTAACTGCAGTGAATGCATGTGTGGCCACTAAATGAGCGGGAACAACCACATGCA
GTGGTTA-----ATTTTATTGTAACGCGTCTTAGAATCTAAAAGGGTGATGAAAAGGAATGAAAATGGACTAGGGACATT
ATTTGGTTTCATCAAATTTGCCAACTCAAGCACTACAATGACCAAATGATTTCAGTCAAAGAAAAAAATACAATGACCAA
ATGATGACATGACTCGCCGTATATCGTTACTTCACGCAATAATAGATCCATATAGAGAAGCGAGAATATTCAGGATTACA
ACTCCTGCGAAGGCCATGATGACATACGCACAATCAGAGCAACAAAACCATTTAGCAGTAGAAATAGTGGTCTACTTTAT
TGAGGACGTAACTAAATAACAAGCAAGAAGAATGGGAAATGTTGTTAACATCATATCAAACGACCGCACTAAAATGATTA
ACATACAAAGAA-AATGAAGTTGTCTCTGGTGGCTAACTGAGCTGAATTTACCAAAGCAAAATGATGCACAATTAAAGAA
TTGATGCCTAAAATAGTTGCCTTGGACCATCTTAGGGAATGTTCCAACAAAGAAGACATTGACTTTTCCTTCTCACCAAT
AGTATTAATCCCTTTGACTTCAAACTGTCTGATATCATGGACTCTACATATATGGATAGAATTTACTAATTAGTCGCAGA
AAGCATGCACTACTAGGGAAATGCCTATACACATGAGCTTAGTAGTAGCGCTGGTTATGGGTCTAGTGCTACTGCAACTT
AGTAGTAGCGCTGGTTGGCAACACGCGCTACAGGTACCAGAGTAGCAGTAGCGATGGGCCCCCTGGCAGCGCTACTGCTA
AGTGGTCCCATGGCAACCGGCAG
>chr2A_1
TAAAGAAGAAAGAAAATAAAATA-AAACTAAAAGATAACCAAAATAATGAAGCTCGTTGAGTAGAATGAATTAGTTGTAT
TCTTATTACCCTTTAGGACGAAAT------AAAAAAACTTAAAAGAAAACTTGCATAAAAGTTTGCACATTTTAAATACT
ATGTAGTAAGAAATAAACATATGATAGTATGATTTGCACACCAC--TATAATTTACACACATGTTACATATTACTTGCGT
GTATGCATTTTACACTCACCTAACATCACAAAAATACCCATGAAAATTGATTAGGGAAAAGAGGAAAGAAAGGCTACAAA
GGCATAAAACAGAAGAACAAGATGAAGCATAGTCAGCCTATAAACAACAGTCAGCAGAAGGAAACACGAGCGCGCTTCAG
CCCAGTAAGGAGTCTACTGACCTAAACCAG-------------------GCCCAACACATGACAGCAGACATGATAAAAA
AGAAAAAAGAGCACGAATCTTGAAGCAGAAATCCAATGGCTCAAAAATCGACTAACCTAAATTCATTTTTCAGGCGAATT
ACACGTAGCTAAATTTATTTAAAAAGAAAAACATGTCACTGCACCAGATCTGGAAATTAAAACGTGTCGCGAGC------
-ACCCGCTGGTCCTGACGGGCTGACGTACGTGCTCT-ACCCCTCCACTCTCATTATTGTTTTTTGTCCCCAGGCCAATGA
AACGGTGGAGGTTGCTGC----------------------GTCGACCTCAGTCAGTTACACTTGGAACCATGGATGCAAG
TCCAAACTTGCGGCCAGGA------------------TAACATCACACCCACAC--CGTGCGATTGACCCTCCTTAATTT
GCTTCTTCTTCTTCGATCAGCCAGGAGGATAAGATGTCTCCTTTCATCTTTGCTTGCATTCTTCATGTCGCCACGCAATC
TCTCTAATTACATGCCTTGGCTGCTTCTC---------------AGGTTTCCCCTAATCTCCCAAGAAAC--TTGGCTTT
GTTCTTTTTCGAGTTCATGAGATGGCCTGGAAGCGAGACTGCTCTGAACACCTTTTGTGGTTAGTGTGG--TGCTTTACG
GTAGTTTTTTTTTTCTTTTGGCAGGAGTAATGTTTGTGTGTGTTTAGTCGCATGTCAAGTGATGT---------------
-----CCCCACATACAAGCCCAACAGAACGGGCGTCCACAGGCCGGCCCTCGTGCACAAGTCTGGATCATGGCCACAGCG
GCGGCGAGCTTACCCATCGCCTGCCTCAACGTCGCCTTCCTGCTCCTGCTCGCCTTCTTCTACGTCTCGCGCCCTGCCGT
GCCGCCGGACTCGGCGACGTCCATGAACGGCTGGAGCGGCGA------CGAGCGCGAGGGGCACGGTCATGGCGGCGGCT
GCGACGGTGCTCACCGGCGGCTGGAGGCTGACAAGGACA-----------------------------------------
----GCTGCCCGCGGGGACGGGGCTACGTCGATTACCTTTACCTGTTCTACTGCGTCTGCGGCGACGAGCACCGGGCCCT
TGGGTACGCCGCGATGGCCGCGTGGCTCGCCGTGCTCTTCTACGTCCTGGGCGACACCGCCGCGGTCTACTTCTGCTCCA
GCCTCGAGGGCCTCTCGCGCCTGCTCCGCCTGTCCCCGGCCGTGGCCGGCGTGACGCTCCTCTCGCTGGGCAACGGCGCG
CCGGACGCGCTCTCCACCGTCGCCTCTTTCGCGTCGGGCGGAGGCGGCGGGAAGGGGGCGAGCACCGCCGTGGGTCTCAA
CGGCTTGCTCGGCGGCGCGCTGTTCGTGTCCTCCGCCGTGCTCGGCGTCATCTGCCTCCGCGTCGGCGGCCGCGGTGTCG
CCATCGACAGAGGCAGCTTCTTCCGGGACGCATGCTTCCTCCTCCTCGCCCTCGCCGCCGTCGCCGTCGTCCTCGCCGTG
GGCGAGGTCAGCATATGGGGCGCCCTCGCCTTCACCTCCCTCTACCTTGTATACGTCCTCGTCGTCGTCTTCATCCACGG
CAGATCGCACGACGGAGAGGCAGAGGCGGCGTGGGTCGACAACACCCCGGCCTCGTCCGAGCTCTGCAACGTCGTGGAGA
CGGATTTTTACGCCCCGGACCAAGATCCGCTGCTCCCCGAAACGGCGCCCCTCCTGCAGTACTACGCCGGCGACGC----
--------AACGAAGAAGAAGAGGAGCGTGTTCTGGTCGGTGGTGTGCGTGCTGGAGCTACCTCTGTACCTCCCGCGGCG
GCTGACCATACCGGACGCGAGCGAGGAGCGCTGGAGCAAGCCGGCCGCGGTCGCCGCGGCGACCCTTTCCCCTGTCTTCC
TCTCCTGCCTATGGAGCCACGCCACCGGGAGCCCGCTTCTCGCCCCCCTCCTCGACGGCATCGCCGGCCTGTTCCTGGGC
CTGCTCGCCTTCCTCGGCACGAACGCTGATGCCCCGCCGACGAAATTCCTCTCGGCCTGGCTCGCCGGTGGGTTCGTCAT
GAGCGTGGCCTGGGAGTACGTCATCGCGAACGAGCTCCTCTCCCTTCTCGTGTCCGCCGGCCTGGTGCTGGGCGTGGATC
CGGCGACGCTGGGGATGACAGTTCTAGCATGGGGCAACTCGCTGGGCGACCTCATCGCCAACGTGGCCGTGGCCGTGGCG
GCGCGCCGCGGTGGAGCCCAGGTGGCCGTAGCCGGTTGCTACGGCGGGCCGGTGTTCAACGTCCTCGTTGGGCTGGGCCT
GTCTCTGCTGCTTTCTTGCTGGGTCGGGTACCCGAATCCGGTAGCGATACCCTGGGAGCCCAGGCTTTATCAGACGCTAG
GCTGGGTAGCTACTGGGCTTTTCTGGGCCTTCGTCATGCTCCCGAGAAGGGGCATGAAGGTGGATAGGACGCTGGGCTTT
GGGCTCCTTGCCATATACTTGTGTTTCTTGTGTACTACTCCCTGCCTTTTTGCTTAATTTAAAGGTTCCAAC--------
--------------------------------------------------------------------------------
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>chr2D_459
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------------------------------------------------------------------------AACAG-AA
AGAAAAAAGAGCAAGAATCTTGAAGCGGAAATTCAATGGCTCAAAAATCGACTTAGCCAAATTCATTTTTTAGGCGAATT
ACACATAGCTAAATTG----AAAAAAAAAAACATATCACCGCACCAGCTCTGGAAATTAAAACATGTCACTGCTCGCAAC
TACCCGCTGGTCCCTG-----------ACGTGCTCT-ATGCCTCCACGCTCATTATTGTTTTTTGTCGCGAGGGCAATGA
ATCGGTGGAGGTTGCTGCCTGCCATCAAGATGGGGCGTGCGTCGACCTCACTCGGTTACACTTGGAACAATGGATGCAAG
TCC-AACTTGCGGCCAGGAAGCGCCGAACCAGGAGGATAACATCACTCACACCCTGCGTGCCATTGACCGTTCTTAATTT
GGTTCTTCTTCAATCAACCAACCAACTCATCACTCTCATATGTTCTTTCATTGTTGCATTCTTCATATCGCCACGCAATC
TCTCTAATTAC----CTTGGCTTCTTCTC----AGGCTGGGTGAAGCTTTCCCCTAATCTCGCAACAAAATTTTGGCTTT
CTTCTTTT------TCATGAGAT-------------GACTGCTCTAAACACCTTTTGTGGTTAGTGTAC--TACTTTACG
ATG------------T--------GAGTAATGTTTGTTTGTGTTTAATCACATGTCAAGTGATGTCCAGATTCAGATTCT
TGCGCCCCCAGATACAAGCCAAGCAGAACGGGCCTCCACAGG-----CCTCGTGCACAAAGCTCGATCATGGCCACAGCG
GCGGCGCGGTTACTCATCGCCTGCCTCAACGTCGCCTTCTTGCTCATGGCCTTCTTCTTCTGCGTCTCGCGCCCTGCCGT
GCCGCGGGATTCGGCGACGTCCATGAACGGCTGGAGCGGCGA------CGAGCGCGAGGGGCACGGCCATGGCGGCGGCT
GCGACGGTGCTCACCGGCGGCTGGAGGTTGACAAGGACAGGTGCGGCTACGACGCCGCTACATCATCGTCAGTTGCCGGC
CGGTGCTACCCGCGGGGACGGGGCTACGTCGATTACCTGTACCTGTTCTACTGCGTCTGCGGCGACGAGCACCGGGCCCT
TGGGTACGCCGCGATGGCCGCGTGGCTCGCCGTGCTCTTCTACGTCCTGGGCGACACCGCGGCGGTCTACTTCTGCTCCA
GCCTCGAGGGCCTCTCGCGGCTGCTCCGCCTGTCCCCGGCCGTGGCCGGCGTGACGCTCCTGTCGCTGGGCAACGGCGCG
CCGGACGCGCTCTCCACCGTCGCCTCCTTCGCGTCGGGCGGCA---CCGGGAAGGGAGCGAGCACCGCCGTGGGGCTCAA
CGGCTTGCTCGGCGGCGCGCTGTTCGTGTCCTCCGCCGTGCTCGGCGTCATCTGCCTCCGCGTCGGCGGCCGCGGCGTCG
CCATCGACAGAGGCAGCTTCTTCCGGGACGCGTGCTTCCTCCTCATCGCCCTCGCCGCCGTCGCCGTTGTCCTCGCCGCG
GGCGAGGTCAGCATTTGGGGCGCCCTCGCCTTCACCTCCCTCTACCTCGTATACGTCCTCGTCGTCGTCTTTATCCACGG
CAGATCGCACGACGGAGAGGCAGAGGCGGCGTGGGTCGACACCACC---GCCTCGTCGGAGCTCTGCAACGTCGTGGAGA
CGGATTTTTA---CCCCGACCAAGAACCGCTGCTCCCCGAAAGGGCGCCCCTCCTGCAGTACTACGCCGGCGACGC----
--------AACGAAGAAAAAGAAGGGCGTGTTCTGGTCGGCGGTGCGCGTGCTGGAGCTACCTCTGTACCTCCCGCGGCG
GCTGACCATACCGGACGCGAGCGAGGAGCGGTGGAGCAAGCCGGCCGCGGTCGCCGCGGCGACCCTTTCCCCTGTCTTCC
TCTCTTGCCTCTGGAGCCACGCCACCGGGAGCCCGCCCCTCGCCCTCCTCCTCGGCGGCATCGCCGGCCTGTCCCTGGGC
CTCCTCGCCTTCCTCAGCACGGAGGCTGATGCCCCGCCGACGAAATTCCTCTCGGCCTGGCTCGCCGGTGGGTTCGTCAT
GAGCGTGGCCTGGGAGTACGTCATCGCGAACGAGCTCCTCTCCCTTCTTGTGTCCGCCGGCCTGGTGCTGGGTGTGGATC
CGGCGACGCTGGGGATGACAGTTCTAGCATGGGGCAACTCGCTGGGCGACCTCATCGCGAACGTGGCCGTGGCCGTGGCG
GCGCGCCGCGGTGGAGCCCAGGTGGCCGTAGCAGGTTGCTACGGCGGGCCGGTGTTCAACGTCCTCGTGGGGCTGGGCCT
GTCTCTGTTGCTGTCTTGCTGGGCCGGGTACCCGAAGCCCGTAGCGATACCCTGGGAGCCCAGGCTCTACCAGACGCTAG
GCTGGGTGGCTGCTGGGCTTTTGTGGGCCTTCTTCATGCTCCCGAGAAGGGGCATGAAGGTGGGTAGGACACTGGGCTTT
GGGCTCCTGGCCATATACTTGTGTTTCTTGTGTACTACTCCCTCCCTTTTTGCTTAATTTAAAGGGTCCAACTCAAAAGA
A-----AGTATGAGTGGTAGAACAAATTTTGTACATTGCAAAACTGCCCAATTAGCATGT--TTTTTTCTCAAAAAAGGT
GTGTTTCTTGGTGCTTTATTCTGCATTAACTGCAGTGCATGCATATGTGGGCACTAAATGAGCGGGAACAGCCACATGCA
GTGGTCAATTTTATTTTATTTTAATGCATCTTAGAATCTAAAAGGGTGATAAAAAGGAATGAAAATGGACTAGGCACATT
ACTTGGTTTCATCAAATTTGCCAACTCAAGCACTACAATGACCAAATGATGGTGTGAGGCAGCTCA--------------
----------------CCGTATATCGTTAGTTCACGCAATAATAGATCCATATAGAGAAGC-AGTATATTCAGAACTACA
ACTCCTGCGAAGGCCATGATGACATAGACACAAACAGAGCAAAAAAAGC-TTTAGCAGCAGAAATAGTGGTCTACTTTAT
TGACGATGTAACTAAATAACATGCAAGAAGAACGGGAAATGTTGTTGACATCATATCAAACAACCACACCAAAATGATCA
ACATACAAAGAAAAATGAAGTTGTCTCTGGTGGTTAACTGAGCTGAATTTACCAAAGCAAAATGATGCACAATTAAAAAC
TTGATGCCTAAAATAATTACCTTGGACCATCTTAGGGAATGTTCCAACAAAGAAGACATTGACTTTCCCTTCTCAACCAT
AGTATTAATCCCTTCAACTTCGAACTGTCTCATATCATGGACTCTGTATATATGGATATAATTTACCAATTAGCCACAGA
AAGCATG-------------------------------------------------------------------------
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>chr2A_2937
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----------------------------------------------------------TTAAAGGTTCCAACTCAAAAAA
AG----AGTATGAGTGGTAGAACAAATTTTCTACATTACAAAACTGTCCAATTAGCATGTCTGTTTTTCCTCAAAAAAGT
GTGTTTGTCGATGCTTTATTCTGCATTAATTGTAGTGCATGCATGTGTGACCACTAAATGAGCAAGAACATCGACATGCA
GTGGTCA-----ATTTTATTTTAATGCATCTTAGAATCTAAAAGGGTGATGAAAAGGAATGAAAATGGACTAGGCACATT
ACTTGGTTCCATCAAATTTGCCAACTCAAGCACTACAATGACCAAATGATGGTGTGAGGCAGCTCA--------------
----------------TCGTATATCGTTAGTTCACACAATAATAGATCCATATAGAGAAGC-AGTATATTTAGAACTACA
ACTCCTGCGAAGGCCATGATGACATACACACAAACAGAGCAAAAAAAGC-TTTAGCAGCAGAAATAGTGGTCTACTTTAT
TGAGGATGTAACTAAATAACAAGCAAGAAGAACGGGGAATGTTGTTGACATCATATCAAACAACCACACCGAAATGATCA
ACATACAAAGAT-AATGAAGTTGTCTCTGGTGGTTAACTGAGCTGAATTTACCAAAGCAAAATGATGCACAATTAAAAAC
TTGATGCCTAAAATAATTACCTTGGACCATCTTAGGGAATGTTCCAACAAAGAAGACAATGATTTTTCCTTCTCACCCAT
AGTATTAATCCCTTCGACTTCGAATTGTCTGATATCATGGCCTCTACATATATGGATAGAATTTACTAATTAGCCGCAGA
AAGCATG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>SNPs
----------SS-----S-----S---------S-------------SS--SS-SSS-S-SSS----------S----S-
--S--------S------S----SSSSSSS----------SS--SS--------S--S--S-------S----S----S-
----------------------S------------S-----SSSSS------S-------------S----S------S-
---SS---------------S-------------------------SS--S--S-S------SS--S-S--S----S---
S----------S--------------S---S---S------------------S----------------S---------
-----------S----------S-------SSSSSSSSSSSSSSSSSSS----S-S---------------S--------
-------------S-S----SS-------------S--S---------------------S--S----------------
-----------------------S----S-----S-------S-------------------------------------
------------------------------------S-------------------------------------------
-------------------------------------------------------S------------------------
---------------------------S-------SSS-SS-SS-------------S----------------------
-----------S--------------S-S-------------S-------S-----------------------------
--------------S-------------SSSSS-----------------S-----------------------------
-------S---------------------S--S-S------------------------------SS--SS---------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------S-----
----------------S---------------------S-SSSSSSSS---S----------S----S-----S------
------------S-------------------------S------------------------------S----------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
-----------------------------------S--S-----------------------------------------
-------------------------------------------------------------S----------S-------
--------------------------------------------S----------------S------------------
----------S---------------------------------------------------------------------
--------S---------------------------------------S-------------------------------
-------------------------S--------------------S------------------S-------S-SSSSS
SSSSSSSS------------S----S------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-S--S--------S-----------S-S---------
--------------------------------S--------------S--------------------------------
---------S----------------------------------------------------------------------
-------------------S-----S------------------------------------------------------
-S---------------S--------------S--------------------S--------------------------
-------------------------------------------S------------------------------------
----------S--------------------------------S------------------------------------
---------------------------------------------S----------------------------------
-SSSSS----------------------------------------------S---------------------------
--S------S---------------------------S--------------------------------S---------
-----S--------------S---S--S----------------------------------------------S-----
-S------------------------------------------------SSSSSSSSSSSSSSS-SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS-------------S-------------------------------S--S--------S-S----
---------------------------S-----S--------S----S-S--------S---------------------
------S-------------------------S-------------S--------------S---S---S--------S-
---------------------------------S-------------------------------------------S-S
---------------S--S----------------------------------------------------------S--
--------------S------S---------------------------------------------------S------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS
>forward_412
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------------------------------------------------------------------------CGCTTCAG
CCCAGTAAGGAA--------------------------------------------------------------------
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>reverse_2207
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----------------------------------------------ACCCCTCCTGCAGTACTACA--------------
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>forward_443
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-----------------------AAACCAGTGGCCAGTCGAAA-------------------------------------
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>reverse_2238
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-----------------------------------------------------------------------------GAC
GGCGACAAAACGAAGAA---------------------------------------------------------------
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>forward_2236
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--------------------------------------------------------CAGTACTACACCGGCGATGG----
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>reverse_3999
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AGTGGTCCCATGGCAACC-----
