>input_sequence_40762
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----------------------------ATGGACGTCGCCGTCGAGAGGCCGCCGCCGGTGAAAGAGGAGAACAAGCCGG
AGACCATGGAGGTATGTACACACATCC------------CTTTAAGTTGTCTAC-----TAGATGCATGTTAACCCGGCA
GTG--------------------TTGAGTTGCTGATCGATGAGCGTGTACCCTA------CATGTTCGTTCTTGAGATCC
AGCTGAAACTGAATTAGCTTCAATTCTTTGGCCTGCAGATCGCAAGCGCGCTTCCAATGGTCCTCGAGAGTTTCCCGTCC
ACGCAAAGAAATTCGATCACCACCAGCAAGGTACTGCAAACTACTCCG--TATGATCTGAAAGTCAAATTGAGAGCTGGT
TAATTAGGAGTACCATGTAAGAAAT---------------AGAAGCAAGTTGAGAATGAATTGCAC--CAAATTAAAGAT
CGAACCATGTGTGTTTATTTTATGAAGAATCGCTCGTA------------------CATCATCTAATGATTTCTCCTGGG
TATTGTGCATGTGCAGGACGACAAGCTGGAGGCGACCAAGGCGGAGATGGGCGAGGTGAGGGAGGAGAACGAGCGCCTCA
AGACGCTGCTCTCCCACATCGTCAGGGACTACCAGTCGCTCCAGACGCACTTCCAGGACGCCGTCAAGGTCAAGCACCAA
GCACCGGCCGCCGACAAGCTCCCTGCCGCCCCCGCGCCGGCGCCTACCGCTACCACCGACGATCTCGTCTCTCTGTGCCT
CGGCAGCGGCGGTTACGCTCGCCCGAAGGGCGCCCACCAGAGGTCGCTGTCGTCGTCGTCGTCCGGCACCGAGACCGACC
CCGACGATCAGCTGTCGCTCGGGCTGAGCAGCCGTCGCTCTACGGACGGCGACGACAGGCAGGCCGCCCGCCCGTCGGCT
ACGCCCCTTATGAACCTCAGCTCCGACAGCAGCGCGGACGACGACGCCGCGCCCGGTAGCGGGCTGCCGGCCGCCGCGTG
CCCGCCGGCGACCAAAGCGCGCAAGAGCCCCGGCGCCGGGGTCGACGGAGCCGACGACGAGGTGCTCCAGCAGCAGGCCA
AGAAGGCTAGGGTTTCCGTCCGTGTCAAATGCGACACCCCCACGGTACGTTCGCGCATACAACATACATACGTACAGTAC
A---AGATTCTGTACGTGTTTTCATGATGAAAATACT--TTTGAATTCAAAATCATGATGAGCTAACCATGTT--TGTGT
GTTGATGATGAGCAGATGAACGATGGGTGCCAATGGCGGAAGTACGGGCAGAAGATCTCCAAGGGGAACCCGTGCCCGCG
CGCCTACTACCGGTGCACCGTGGCGCCGTCCTGCCCGGTGCGGAAGCAGGTGCAGAGATGCGCCGACGACATGTCCATCC
TGATCACGACGTACGAGGGCACGCACAGCCACCCGCTGCCGCCGGCCGCCGCGGCCATGGCGTCCACCACCTCCGCCGCT
GCTTCCATGCTGCTCGCCGGCTCTTCCTCGTCCTCGTCCCACGGGCACCACCTCCCTTTCCCGTCCGCGGGGCTCCTGGG
CCCGACCACCATCTCCACCATCGCGTCCTGCCCCACCGTCACGCTCGACCTCACCGCCCCGCACTCGCTCATGCAGCAGC
AGTACCAGTCTCCCTACGCGGCAGGGTACGAGTCCAAGGCGCTGCCGGCGGCGTGGAGCAGCGGCTACCTGGCGCCGTAC
GCCGGGGGGCTGCCGTACTACGGCAAGAGCTCCTTGCCGGCGATGGGGCAGCATTTCGGCCTGGGCATGGCGACGACGAG
GGCGGAGCAGCTGTACGGCGCCGCCCATTCGTCCTCGTACCTGCAGAGAACGTCCAGCGGCGGCGTCGTCCATGGCGCGC
CCGCGGCCGCGCCGGCGGTGACGGACACGATCGCGAAGGCGATCACCTCGGACCCGAGCTTCCAGTCGGTGCTGGCGGCG
GCGATCACGTCCTACATGGGGCGCGGCGCTGGGGCGGCGGCGCACAAGTGA-----------------------------
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>chr3D_1_TraesCS3D01G113300
CGGTCCGAGTCCTCGCTCTTACTACGTTTGACCTGCTGCATGCACGTAAATCCTGAATCGATACTACGTGCGTGCGTCAC
TCACGTCGAGCAAGGCGTT-ATATCAGAATTTCCGCATCATTTTATGC---TATATATTTTTACGTGGAGAGGAGAACAG
TTCAGACTCAAATTG--------GACCGACCGGCCGCTGGC---------------------CAGTTGCTTGCTTCTCCG
GGTTAGCCGTACGAAAGTCAACACGTAAAACGGCCCCAAAACGAATTCAACGCTAGCAGCTGCACGCTCATGCTGCGTGC
GTACATACGCTAACCAAGAACACATCTAAGCTAGCTA-----GCTAAGTCAAAGCCTCTCTCTCAGAGCAAAACGGAAGG
ATGATTGCACAATGA----AGGTCGCACGCACGTACGTGCGTGCGTGCGATCCGCATTCGGAGGGGAGGGAGCTCGCTCG
CGGAACCAACGCTGAGGGGAGGGGGCCGGCGACTTGCAGGACACGTTGTGGGCGGCGACGACGCTGACGACGGCCACGGC
CGGTGGTGACCACCGCGCGCGAGGGCGGTATTATATTGGGGAATGGGGAAGCCAAGGCAGCCTGCTTACCTCACTCGCTC
GCTAGCTAGCTTGGTAGACCTGCCTGCCTGC----CTGCTGCCCATGAGGGAGGCTGG--------GTACACGCGTTGAC
ATTGTTTATGAGCTCGCTCGCTCTCT----CGCTCGCTCTGGTCTGGACGGGAACCAGCAACCGAGCCGCCGTGATGGTA
CGGTAGGT--TAAGGAGCCGGGCACTGGGATTTGAGATTTGGTACGCGGAGCACGCAGCAACTGCTGTTTATCCATTAGT
TTAATCCCCGGCGAGTCAGAAAGTGTAGGCTTCGTCGTCCTAGTCGTCGTCGTCGCTTCGACTCCGATCCTTCTTTATAA
GGAGGGCGCGGGGCTGCTGCAACCACAAGGCGTCTCTTGCTCATCCAAAGCAAACAAAGCTCCCTCTCTGCAGGTTCGCC
ATCTC--------GTGACTGATCCGTCCATGGACGTCGCCGTCGAGAGGCCGCCGCCGGTGAAAGAGGAGAACAAGCCGG
AGACCATGGAGGTATGTACACACATCC------------CTTTAAGTTGTCTAC-----TAGATGCATGTTAACCCGGCA
GTG--------------------TTGAGTTGCTGATCGATGAGCGTGTACCCTA------CATGTTCGTTCTTGAGATCC
AGCTGAAACTGAATTAGCTTCAATTCTTTGGCCTGCAGATCGCAAGCGCGCTTCCAATGGTCCTCGAGAGTTTCCCGTCC
ACGCAAAGAAATTCGATCACCACCAGCAAGGTACTGCAAACTACTCCG--TATGATCTGAAAGTCAAATTGAGAGCTGGT
TAATTAGGAGTACCATGTAAGAAAT---------------AGAAGCAAGTTGAGAATGAATTGCAC--CAAATTAAAGAT
CGAACCATGTGTGTTTATTTTATGAAGAATCGCTCGTA------------------CATCATCTAATGATTTCTCCTGGG
TATTGTGCATGTGCAGGACGACAAGCTGGAGGCGACCAAGGCGGAGATGGGCGAGGTGAGGGAGGAGAACGAGCGCCTCA
AGACGCTGCTCTCCCACATCGTCAGGGACTACCAGTCGCTCCAGACGCACTTCCAGGACGCCGTCAAGGTCAAGCACCAA
GCACCGGCCGCCGACAAGCTCCCTGCCGCCCCCGCGCCGGCGCCTACCGCTACCACCGACGATCTCGTCTCTCTGTGCCT
CGGCAGCGGCGGTTACGCTCGCCCGAAGGGCGCCCACCAGAGGTCGCTGTCGTCGTCGTCGTCCGGCACCGAGACCGACC
CCGACGATCAGCTGTCGCTCGGGCTGAGCAGCCGTCGCTCTACGGACGGCGACGACAGGCAGGCCGCCCGCCCGTCGGCT
ACGCCCCTTATGAACCTCAGCTCCGACAGCAGCGCGGACGACGACGCCGCGCCCGGTAGCGGGCTGCCGGCCGCCGCGTG
CCCGCCGGCGACCAAAGCGCGCAAGAGCCCCGGCGCCGGGGTCGACGGAGCCGACGACGAGGTGCTCCAGCAGCAGGCCA
AGAAGGCTAGGGTTTCCGTCCGTGTCAAATGCGACACCCCCACGGTACGTTCGCGCATACAACATACATACGTACAGTAC
A---AGATTCTGTACGTGTTTTCATGATGAAAATACT--TTTGAATTCAAAATCATGATGAGCTAACCATGTT--TGTGT
GTTGATGATGAGCAGATGAACGATGGGTGCCAATGGCGGAAGTACGGGCAGAAGATCTCCAAGGGGAACCCGTGCCCGCG
CGCCTACTACCGGTGCACCGTGGCGCCGTCCTGCCCGGTGCGGAAGCAGGTGCAGAGATGCGCCGACGACATGTCCATCC
TGATCACGACGTACGAGGGCACGCACAGCCACCCGCTGCCGCCGGCCGCCGCGGCCATGGCGTCCACCACCTCCGCCGCT
GCTTCCATGCTGCTCGCCGGCTCTTCCTCGTCCTCGTCCCACGGGCACCACCTCCCTTTCCCGTCCGCGGGGCTCCTGGG
CCCGACCACCATCTCCACCATCGCGTCCTGCCCCACCGTCACGCTCGACCTCACCGCCCCGCACTCGCTCATGCAGCAGC
AGTACCAGTCTCCCTACGCGGCAGGGTACGAGTCCAAGGCGCTGCCGGCGGCGTGGAGCAGCGGCTACCTGGCGCCGTAC
GCCGGGGGGCTGCCGTACTACGGCAAGAGCTCCTTGCCGGCGATGGGGCAGCATTTCGGCCTGGGCATGGCGACGACGAG
GGCGGAGCAGCTGTACGGCGCCGCCCATTCGTCCTCGTACCTGCAGAGAACGTCCAGCGGCGGCGTCGTCCATGGCGCGC
CCGCGGCCGCGCCGGCGGTGACGGACACGATCGCGAAGGCGATCACCTCGGACCCGAGCTTCCAGTCGGTGCTGGCGGCG
GCGATCACGTCCTACATGGGGCGCGGCGCTGGGGCGGCGGCGCACAAGTGATCGATCGACCTCGCGCCGTGTAGATTTCT
TTTTGGTTTAGGCCCGTGGA---TTATCCTTGTATACGCAGTTAAGTTTACTTCGTTTTGGTGTTATGCTGAATTGGCTT
GGGAGATCGACACATGGTCATCGATCTAGTCTAGGGATTAGTTGATGTACAATTAATTGCACATATATGGCATGGATGAG
TCAACTGTATATGTACTGTGAGAAAGAAAGCGATCAGATCGTCCCAGCTGTATATGCACATAGCCAGGCATGTGATTTAG
GGGATTAAACTTGTTTATGCTCTCATATACCAAGTTGATCTTAGGGTTCCATACGCGATAAAGCACAAAGTTTGTGGCGT
TATGGTGTGCTGGACTTGGTGTTTTGTTGACATTCGGTTCATATAAATAATAGGGTTCCTCCATCTCACCGAGAAATAGG
GATCTACTCAGACATAGAGGCACAAGACATCATCAAGGTGTTCTTATCAATAACGTAGGAATGATTGAAGCGAGACACTT
ATGAATCCACAATTGGTTTAGGATTACAACAAGATGGATGGAAGAGTTGGTGTTGATGGCATGGGTGATGATGATGGAGA
TCGATGTCGTGGTCTATGTGATTGAAGCAATAGTGAGTTGGAGACCCTTATATTGATTCCCTCTCCGGACCCCTACCGAT
GGTGAAGTTTTGATATTATTTCGTATGGTAGAATCTCTTTGTTTGTCAGATCCGATTGCACGAGATGGAAGTAGTCGACC
CAAGGGAGACGACGCCGTGCCGTATGACCGCTTCTACGAGTGGTTGTGCTCGTACCACACATCGTGTTCA-TTCTGGAGA
GCCGAATGCAGTTTCCTAACACATCTTCTCATCGTATGGAAGGTTTTATGGCATCCAATCAA-CATATATTCTACCAAAA
ATGAGTGTTCTCTAATGAATGTTCCCAATCTCGTGATTCCAGGGATCTTGGTGAAATCAAACAAAAACAGGCAAACGATC
GCAGTAAAATGCTACA
>chr3A_1
CGGCCCGAGTTCTCGCGGTTACTACGTTTGACCTGCTGCATGCACGTAAATCCTGAATCAATACTACGTGCGTGCGTCAC
TCACGTCGAGCAAGGCGTTTATATCAGAATTTTCGCATCATTTTATGCTAGTATATATTTTTACGTGGAGAGGCGAACAG
TTCAGACTCAAATTG--------GACCGACCGACCGATGGC---------------------CAGTTGCTTGCTTCTCCG
GGTTAGCCGTACGAAAGTCAACACGTAAAACGGCCCCAGAACGAGTTCAACGCTGGC---TGCACGCTCATGCTGCGTGC
GTACATACGCTAACCAAGAACACAT---------CTA-----GCTAAGTCAAAGCCTCTCTCTCAGAGCGAAAGGGAAGG
ATGATTGGACAATGA----AGGTCGCA--------CGTACGTGCGTGCGATCCGCATTCGGAGGGGAGCTCGCTCGCTCG
TGGAACCAACGC-----GGCGGGGGGCGGCGACTTGCAGGACACGTTGTGGGCGGCGACGACGCTGACGACGGCCAC---
CGGTGGTGACCACCGGCCGCGAGGGCGGTATTATATTGGGGAGCGGGGAAGCCAAGGCAGCCTGCTGACCTCACTCGCT-
---AGCTAGCTTGGTAGACCTGCCTGCCTGCTTGCCTGCTGCCCATGAGGGAGGCTGGCTAGCCGGGTACACGCGTTGAC
ATTGTTTATAAGCTCGTTTGCTCGCTCGATCGG------TGGTCTGGACGGGAACCAGCAACCGAGCCGCCGTGATGGTA
GGTTAAGGAATAAGGAGCCAGGCACTGGGATTTGAGATTTGATACGCGGGCCACGCAGCAGCTGCTGGTTATCCATTAGT
TTAATCCCCGGCGAGTCAGAAAGTGTAGGCTTCGACGTCCTAGTCGTCGTCGTCGCTCCGATTCCGATCCTTCTTTATAA
GGAGGGCGCGGGGCTACTGCAACCACAAGCCGTCTCTTGCTCATCCAAAGCAAACAAAGCTCCCTCTCTCCTTT---GCC
ATCTC--------GTGACTGATCCGTCCATGGACGTTGCCGTCGAGAGGCCGCCGCCGGTGAAAGAGGAGAACAAGCCGG
AGACCATGGATGTATGTACACGCATAATCTGCTCCTTTCC-TTGAGTTGTCTACTAGAGTAGATGCATGTTAACTCGGCG
GTGCTGTGCATCACCATGAATAATTGAGTTGCTGATCGATGAGCGTGTACCCTATAGCTACATGTTCGTTCTTGAGATCG
AGCTGAAACTGAATTAGCTTTAATTGTTTGGTCTGCAGATCGCAAGCGCCCTTCCGATGGTCCTTGAGAGTTTCCCGTCC
ACGCAAAGAAATCCGATCACCACCAGCAAGGTACGAACTACAGTACGAACTATGATCTGAAAGTCAAATTGAGAGCTGTT
TAATTAGT------ATGTAAGAAAC---------------AGAAGCAAGTTGAGAATGAATTGCACACCAAATTAAATAT
CGTG----------TTTATTTACGAAGAATCACTAGTATGATACGTATATAGTTCGCATCATCTAATGATTTTTCTTGGT
TAT----CATGTCCAGGACGACAAGCTGGAGGCGACCAAGGCGGAGATGGGCGAGGTGAGGGAGGAGAACGAGCGCCTCA
AGACGCTGCTCTCCCACATCGTCAGGGACTACCAGTCGCTCCAGACGCACTTCCAGGACGCCGTCAAGGTCAAGCACCAA
CCACCGGCCGCCGACAAGCTCCCTGCCGCCCCCGCGCCGGCGCCTACCGC------CGACGATCTCGTCTCTCTGTGCCT
CGGCAGCGGCGGTTACGCCCGTCCCAAGGGCGCCCACCAGAGGTCGCTGTCCTCGTCGTCGTCCGGCACCGAGACCGACC
CCGACGATCAGCTGTCGCTCGGGCTGAGCAGCCGCCGCTCCACGGACGGCGACGACAGGCAGGCCGCCCGCCCGTCGGCT
ACGCCTCTTATGAACCTCAGCTCCGACAGCAGCGCGGACGACGACGCCGCGCCCGGTCACCAGCTGCCGGCCGCCGCGTG
CCCGCCGGCGACCAAAGCGCGCAAGAGCCCCGGCGCCGGGGTTGACGGAGCCGACGACGAGGTGCTCCAGCAGCAGGCCA
AGAAGGCTAGGGTTTCCGTCCGTGTCAAATGCGACACCCCCACGGTACGTTCGCGCTTAGTACA-----ACATACATACG
TACAAGATTCTGTACGTGTTTTCATGATGAAAATACT--TTTGAATTCAAAATCATGATGAGCTAACCAAGTT--TGTGT
GTTGATGATGAGCAGATGAACGATGGGTGCCAATGGCGGAAGTACGGGCAGAAGATCTCCAAGGGGAACCCGTGCCCGCG
CGCCTACTACCGGTGCACCGTGGCGCCGTCCTGCCCGGTGCGGAAGCAGGTGCAGAGATGCGCCGACGACATGTCCATCC
TGATCACGACGTACGAGGGCACGCACAGCCACCCGCTGCCGCCGGCCGCCGCGGCCATGGCGTCCACCACCTCCGCCGCG
GCGTCCATGCTGCTCGCCGGCTCCTCCTCGTCCTCGTCCCACGGGCACCACCTCCCTTTCGCGTCCGCGGGGCTCCTGGG
CCCGACCACCATCTCCACCATCGCGTCCTGCCCCACCGTCACGCTCGACCTCACCGCCCCGCACTCGCTCATGCAGCAGC
AGTACCAGTCTCCCTACGCGGCAGGGTACGAGTCCAAGGCGCTGCCGGCGGCGTGGAGCAGCGGCTACCTGGCGCCGTAC
GCCGGGGGCCTTCCGTTCTACGGCAAGAGCTCCTTGCCGGCGATGGGGCAGCATTTCGGCCTGGGCATGGCGACGACGAG
GGCGGAGCAGCTGTACGGCGCCGCCCATTCGTCCTCGTACCTGCAGAGAACGTCCAGCGGCGGCGTCGTCCATGGCGCGC
CCGCGGCCGCGCCGGCGGTGACGGACACGATCGCGAAGGCGATCACGTCGGACCCGAGCTTCCAGTCGGTGCTGGCGGCG
GCGATCACGTCCTACATGGGGCGCGGCGCCGGGGCGGCGGCGCACAAGTGATCGATCGAC-TCGCGCCGTGTAGATCTTT
-----------------------------TTGTTCACGCAGTTAAATTTACTTCGTTTTGGTGTA----TGAATTGGCTT
GGGAGATCGACACATGGTCATCGATCTAGTCTAGGGATTAGTTGATGTACAATTAATTGCACATATATGGCATGGATGAG
TCAACTGTATATGTACTGTGAGAAAGAAAGCGATCAGATCGTCCCAGCTGTATATGCACATAGCGAGGCATGTGATTTAG
GGGATTAAACTTGTTTATGCTCTCGTATACCAACTTGTTCTTAGGGTTCCATACGCGATGAAGCACAAAGTTTGTGGCGT
TATGGTGTGCCGGACTTGGTGTTTTGTTGACATTCAGTTCATAAAAATATCAGGGTTCCTCGATCTCACTGAGAAATAGG
GATCTACTCAGACATAGAGGCACAAGACATCATCGAGGTGTTCTTATCAATAGCGTAGGAATGATTAAAGTGAGACACTT
GTGAATCCACAATTGGTTTAGGATTACAATGAAACGGATGGAAGAGTTGTTGTCGATGGCATGGATGATGATGATGGAGA
TCGACGTCGTGGTCTGTGTAATTGAAGCAATGGTGAGGTAAAGACCCTTATGTCGATTCCCCCTCCGG-----------T
GGTGAGGTTCTGATATTGCTTCGTATGGTGGAATCTCTCTGTTTGTCAGATTCGATTGCATGGGATGGAAGTAGTCGACC
CAAGGGAGACGGCGCCGTGCGGTACGACCGCTGCTACGAGTGGTTGTGCTCGTACCACACATCATCCTCTCTTCTGGAGA
GCCGAATGCAGTTTCCTGACACATCTTCTCATCGTATGGAAGGTTTTATGGCATCCAATC-A-CATATTTTCTACCACAA
ATGAGCGTTCTCTAATGAATGTTCCCAATCTCGTGATTCCGGGGATCTTGGTGAAATCAAAGAAAAACGGGCAAACGATC
GCAGTAAACTGCTACA
>chr3B_4
TCCGAGTTT---TCGCTGTTACTACGTTTGACCCGCTGCATGCACGTAAATCCTGAATCAGTACTGCGTGTGTGCGTCAC
TCACGTCGAG----GCGTT-ATTCGAGAATTCAGACC-----------------ATATTTTTACGTGGAGAGGAGAACAG
TTCAGACTCAAATTGGACAGACCGACCGACCGACCGATGGCTGGCTGAACAATTCCGATCACCAGTTGCTTGCTTCTCCG
GGTTAGCCGTACGAAAGTCAACACACAAGACGG-CCCCAAACGAATTCAACGCT---AGCTGCACGCTCATGCTGCGTGC
GTACATACGCTAACCAAGAACACAT---------CTAAGCTAGCTAAGTCAAAGCCTCTCTCTCGGAGCGAAAGGGAAGG
ATGATTGGATGTATGAAGCAGGTCGCACGTCCGTGCGTGCGTGCGTGCGATCCGCATTCGGAGGGGGGCTAGCTCGCTCG
CGGAACCAACGC-----GGCGGGGGCCGGCGACTTGCAGCACACGTTGTGGGCGGCGACGACGCTGACGACGGCCACGGG
CGGTGGTGACCACCGCGCGCGAGGGCGGTATTATATTGGGGAATGGGGAAGCCAAGGCAGCCTGCTTACCTCACCCGCT-
---AGCAGGCAGGCAGGTCTGGACGGGTGAGGTA---GCTGCCCATGAGGGAGGCTGG--------GTACACGCGTTGAC
ATTGTTTATGAGCTCGTTTGCTCGCT----CGA------TGGTCTGGACGGGAACCAGCAACCGGGCCGCCGTGATA---
--GTAGGT--TAAGGAGCCAGGCACTGGGATTTGAGATTTGGTACGCGGAGCACGCAGCAACTGCTGGTTTTCGATTAGT
TTAATCCCCGGCGAGTCAGAAAGTGTAGGCTTCG---TCCTAGTCGTCGTCGTCGCTTCGATTCCGATCCTTCTTTATAA
GGAGGGCGCGGGGCTACTGCAACCACAAGGCGTCTCTTGCTCATCCAAAGCGAACAAAGCTCCCTCCATCTCGTGGCTAG
CTGCTTGATCTTTGTGACTGATCCATCCATGGACGTCGCCGTCGAGAGGCCGCCGCCGGTGAAAGAGGAGAACAAGCCGG
AGACCATGGAGGTAC--ACACACATAATCTGCTCCTTCTCTTTAAGTTGTCCAC-----TAGATGCATGTTAACCCGGCA
GTGCTGTGCATCACCATGAATAATTGAGCTGGTGATCGATGAACGTGTACCCTATAGCTACATGTTCCTTCTTGAGATCG
AGTTGTAACTTAATTAGCTTTAATTGTTTGGCCTGCAGATCGCAAGCGCGCTTCCAATGGTCCTCGAGAGTTTCCCATCC
ACGCAAAGAAATTCGATCACCACCAGCAAGGTACTACTACA------AACTATGATCTGCAAGTCAAACTGAGAGCTGTT
TAATTAGGAGTGCTATGTAGTAAGAAATAGTACTAGTAGTAGAAGCAAGTTAAGAATGAATTGCAC--CAAATTAAAGAT
CGAATCATGTGGGA-TTATTTACGAAGAATCACTAGTACGATG----TACAGTTCTCATCATCTAATGATTTCTCTTGGG
TATTGTGCATGTGCAGGACGACAAGCTGGAGGCGACCAAGGCGGAGATGGGCGAGGTGAGGGAGGAGAACGAGCGCCTCA
AGACGCTGCTCTCCCACATCGTCAGGGACTACCAGTCGCTCCAGACGCACTTCCAGGACGCCGTCAAGGTCAAGCACCAA
GCACCGGCCGCCGACAAGCTCCCTGCAGCCTCCGCGCCGGCACCCACCGC------CGACGATCTCGTCTCCCTGAGCCT
CGGCAGCGGCGGTTACGCCCGCCCCAAGGGCGCCCACCAGAGGTCGCTGTCGTCGTCGTCCTCCGGAACCGAGACCGACC
CCGACGATCAGCTGTCGCTCGGGCTCAGCAGCCGTCGCTCCACTGACGGCGACAACAGGCAGGTCGCCCGCCCGTCAGCG
ACGCCCCTTATGAACCTCAGCTCCGACAGCAGCGCCGACGACTCCGCCGCGCCCGGTAGCGACCTGCCGGCCGCCGCTTG
CCCACCGGCGACCAAAGCACGCAAGAGCCCCAGCGCCGGGGTCGACGGAGCCGACGACGAGGTGCTCCAGCAGCAGGCCA
AGAAGGCTAGGGTTTCCGTCCGTGTCAAATGCGACACCCCCACGGTACGTTTGCGCATAGTACA-----ACATACAGTAC
A---AAATTGCATGCCACAAGAAAATACTTTTGAATTGGTTTGAATTCAAAATCATGATGAGCTAATGAGTTCTCTGCGT
GTTGATGATGAACAGATGAACGATGGATGCCAATGGCGGAAGTACGGGCAAAAGATCTCCAAGGGGAACCCGTGCCCGCG
CGCCTACTACCGGTGCACCGTGGCACCGTCCTGCCCGGTGCGGAAGCAGGTGCAGAGATGCGCCGACGACATGTCCATCC
TGATCACGACCTACGAGGGCACGCACAGCCACCCGCTGCCGCCGGCCGCCGCGGCCATGGCGTCCACCACCTCCGCCGCG
GCGTCCATGCTGCTCGCCGGCTCTTCCTCGTCCTCGTCCCACGGACACCACCTCCCTTTCGCGTCCGCAGGGCTCCTGGG
CCCGACCACCATCTCCACCATCGCGTCCTGCCCCACCGTCACGCTCGACCTCACCGCCCCGCACTCGCTCATGCAGCAGC
AGTACCAGTCTCCCTACGCGGCAGGGTACGAGTCCAAGGCGCTGCCGGCGGCGTGGAGCAGCGGCTACCTGGCGCCGTAC
GCCGGGGGGCTTCCGTTCTACGGCAAGAGCTCCTTGCCGGCAATGGGGCAGCATTTCGGCCTGGGCATGGCGACGACGAG
GGCGGAGCAGCTGTACGGCGCCGCCCATTCGTCGTCGTACCTGCAGAGAACGTCCAGCGGCGGCGGCGTCCATGGCGCGC
CCGCGGCCGCGCCGGCGGTGACGGACACGATCGCGAAGGCGATCACGTTGGACCCGAGCTTCCAGTCGGTGCTGGCGGCG
GCGATCACGTCCTACATGGGGCGCGGCGCTGGCGCGGCGGCGCACAAGTGATCGATCGACCTCGGGCGGTGTAGATTTCT
TTTTTGTTTATAGGTCCGTGGATTTATCCTTGTAT--GCAGTTAAATTTACTTCGTTTTGGTGTTATGA--AATTGCCTT
GGGAGATCGAC--ATGGTCATCGATCTAGTCTAGGGATTAGTTGATGTACAATCAATTGCACATAGATGGCATGGATGAG
TCAACTGTAT--GTACTGTGAGAAAGAAAGCGATCAGATTGTCCCAGCTGTATATGCACATAGCCAGGCATGTGATTTAG
GGGATTAAACTTGTTTATGCTCTCATATACCAACTTGATCTTAGGGTTCCATACGAGATAAAGCACAAAGTTTGTGGCGT
TATGGTGTGCCGGACTTGGTGTTTTGTTGACATTCAGTTCATATAAATACCAGGGTTACTCCGTCTCACTGAGAAATAGG
GAACTATTTGGACATAGAGGCACAAGACATCACCGAGGTGTTCTTATCAATAACACAGGAATGATTAAAGTGAGACATTT
ATGAATCCACAATTGGTTTAGGATTACAACGAGATGGATGAAAGAGTTGGTGTCGATGGCATGGATGATGACCATGGAGA
TCGACGTCGTGGTCTATGTGATTGAAGCAATGGTGAGGTGGAGACCCTTATGTTGATTCCCCATCCGGACCCCTTCCGGT
CCTGAGGTTCTGATATTGTTTCGTATGGTGGAATCTCTCTATTTGTCAGATCCAATTGCATGGGATGAAAGTAGTTGACC
CAAGGGAGGCGGCGGCGTGCGGTATGACCGCCGCTACGAGTAGTTGTGCTCGTACTACACATCGTCTTCTCTTTTGGAGA
GCCGAATGCAGTTTCCTGACACATCTTCTCATCGTATGGAAGGTTTTATGGCGTCCAATC-AACATATTTTCCACCAAAA
ATGAGTGTTCTCTAATGAATGTTCCCAATCTCGTGATTCCGGGGATCTTGGTGAAATCAAACAAAAACGGGCAAACAATC
GCAGTAAAATGCTACA
>SNPs
---S------S------S-----------------------------------------S--------------------
--------------------------------S-----------------------------------------------
--------------------------------S---S-------------------------------------------
------------------------------------------------------S-------------------------
-------------------------SSSSSSSSS-----------------------------------S---S------
-------S---------------------SS---S---------------------------------SS----------
------------SSSSS--S-----------------------------------------------------------S
-------------------------------------------------------------------------------S
SSS-----------------------------------------------------------------------------
----------------S-S----S--------SSSSSSS-----------------------------------------
S------------------S-----------------------------------------------S------------
----------------------------------S--------------------------S------------------
---------------S-----------------------------------------------------S-S-SSS----
--------------------------------------------------------------------------------
-------------------------SS-----------------------------------------------------
-------------------------------------------------------------------------------S
--------------------S----S------------------------------------------------------
-----------------------------------S-S---SSSS-SS------------------------------S-
-----------S-S----------S-------------------------------------------------------
----S------S-S--SS----S--------S--S----------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------SSSSSS------------------------
------------------S-----S-------------------------------------------------------
----------------------------------------S---------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------SS---SSSSS--S--------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--S---------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S----S---------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
----S-----SSSSSSS-SS-------------------------S----------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
----------S------------------------S-------------SS------------------S----------
----------------------------------S-------------------------------S---S---------
------------------------------S----------------------S----------S---------------
----S--------------------------S-----S-------------S---------S------------S---S-
-----S---S-------S-----------S--------S---------------------S-S-----------------
-----------S--------S-----------S--------------------------------S---S----------
-----------------S------------------------------------------S-------S-----------
----------------------------------------S---------------------------S-----------
----------------
>forward_640
--------------------------------------------------------------------------------
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------------------------------------------------------------CCTGCTTACCTCACTCGCTC
--------------------------------------------------------------------------------
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>reverse_2310
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---------------------------------------------------------------------TGTTTGTGTGT
TGATGATGAGCA--------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>forward_1034
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------------------------------------------------------CAAAGCTCCCTCTCTGCAGG------
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----------------
>reverse_2817
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----------------ACTACGGCAAGAGCTCCTTG--------------------------------------------
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>forward_1035
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-------------------------------------------------------AAAGCTCCCTCTCTGCAGGT-----
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----------------
>reverse_3125
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----GGTTTAGGCCCGTGGATTATC-------------------------------------------------------
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