>input_sequence_40708
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---------------------------------------------------------------------ATGAGCAGCCG
AAGCCCGCCGCCGAGGGACCGGAGGATGCGTACTGAACGCACCTTGTACCGTGACGCGCCATACCGGAGAGACAGGGACG
GCCGCCGTGGTCCAAACAGGTTTGAGCCGCCTTATTTAATGAAACACGATGAACATTTGCCATCGTATATCAAGCGTTGC
TGCTTTCTCTCCTAACTGTATGCGTTGGCCATAATGCTACCTGAAGAGGCCTTACTCTAGCCCTGGTTTCTATGATGGTA
GCAGGGGCCTGTGTATCCTCTAATTATTTCCTTTACTTGTACTGCAGGTCTGCTAGTGATTTGTGCAACAACTGTAAGCG
TCCAGGGCATTTTGCTAGAGATTGTCCAAATGTGTCTGTCTGCCATGCCTGTGGCCTTCCAGGGTAAGGACTATTACTTG
TTTGGTCATGCGGATCTGAGATTTTGCAGTCTTGTATGTTAGCTCATGTTAAGATCTTCCATTGTGTAGCAAC-TTTTTA
TTGTATTCTTGACTTCTTATTCATAATGATTCAATGTTTTATTT---------TAGCCCTGCTATTTTCTAGTGCACATT
T------------------------------GTTATTTGCTTTTGTATGCCGTATTGTATCTAGAACTCTGTCCATCATC
ATGTAACTATTGCATTTCTTTTCCTGTGGGGTTTTCATGCTTTTAATATTCTAGGTAGACCTAGTTGTTTTCCAGTGCAT
ATTTTACATTGGGTTACCATGATTAATGGTTGCAATTATTTGCTCATGCTTAACCATTTTGAGGCACCTTATGTTCTTGT
CATGTTTAATGAGAAATCTAGTATCAGCGTGAATTGATAGTTTATTTGAGAT-CCCCCACCCCCCTCAAAACAATACACG
TGTCACCTGTCTTAAGTCATTTGTAATCATCTTATGTTAGTACCTTTTTAGTACAAGTGCAAGTGCCTTGTACAAGGATT
TGGTTCATTTTTCATAATTTATTCTGGATGCAAATATATTATCAGAAGGCGGTGGTTAACAAATAATGATACTTGAAGTT
TGAACTGTACATAGATCATAACCATCATAAAAATGACCAGTACATGATAAATTGTGAAGCTTAAGTTGTACTCCCTCCGT
CCTAAAATAAGTGTCTCAACTCTAGTACAACTTTGTACTAAAGTTAGTATAAAGTTAAGACACTTATTTTGAGATGGAGG
GAGTACATAGGTCATACGTTATTCTTCCATGTGACCAGAGGAAAGCC-TGCATAGTACATCCTCTACCTTTCTTCTGAGG
CAAAAACATTGGCCACTCAGTTTTTAAATTTCTGCAGGCACATTGCAGCTGAGTGTTCTTCCAAAGATCTCTGCTGGAAC
TGCAAAGAGCCTGGACACATGGCTAATGCCTGCCCGAACGAAGGGATATGCCGCAACTGTGGCAAATCAGGCCACATTGC
AAAAGACTGCACTGCTCCGCCAATGCTGCCTGGAGAAGTGAAGCTCTGCAACAACTGCTACAAACCAGGGCACATTGCCG
TGGAGTGCACCAACGAGAAGGCCTGCAACAACTGTAGGAAGAGTGGCCATCTTGCCCGTAACTGCACCAATGAGCCTGTT
TGCAACCTCTGCCATGTTGCAGGGCATTTGGCCCGTCAATGCCCCAAATCTGACGAGATCAACGAGAGGGGTGGGCCTCC
TCCCTTCCGTGGCGGCGATGCTCTGTTCCGTGGCGGT---------------------GATGCTCTGTTCCGCGGTGGTG
ATGCTCCCTTCCGTGGTGGCGATGCTCCCTTCCGCGGTGGCGGTGGTGCTCTCTTCCGTGGTGGCTACAGTGACGTGGTC
TGCCGGGCCTGCAACCAGGTTGGCCATATGAGCCGTGACTGCATGGGTGGCGCCTTCATGATCTGCAACAACTGCGGTGG
CCGTGGTCACATGGCTTACGAATGTCCATCTGGGAGGCTCCTGGACCGGTTCCCTCCACGCCGATACTGA----------
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-------------------------------------------------------
>chr1B_1_TraesCS1B01G219300
TCGCTCGATTCCGGCCCACCACAAGCGCCACAGCCTTTTTTAAAACTTTGCGTTACGACTTCTAGTCTTCTACGGGTGGC
TCGCTTTCTGTGAGCCGTCCACTGGAGATCGGACGGCTAGGAAAATCACGTGCTCCCTCTTATAGCCTGGATCTGC----
GTCGTCTTCCCGACCGACCGACCGGGTGCCTTCGGTGTCCGGACCAACCCAATCCCAATCCAACATCGCGAGTCGGGGTC
TCTGTCCCTCACCGTCGCCGCCGCGGCTTCCCCCCGCTGACCTCCGCCGGAGTTCGCCGGACTCGTAGGGTTTCTTCAGT
CGTCCTCTTCCCTGCTGGAGATCCGTACCCTAGGTAAGCCTCGGTTTCGTCGACTTCACCTTCACCTAATTTGCGCCGTG
TTAGCAGAAATCGGCCCGTCTTCCCCGAGATTTCGTGCCTTTAGCTGTA--C----------GCGTATGTTGCCCGAGTA
GATGCGAACCCGCTTGCTGTTGCCCGATGTGGTCGCCGCCCCTAGGGTTTCTTTCATTGAAGC-TTGGGCTTTGTCCGAT
AGGACTTAGGAGCATGGCCCGGTGGAACTGTTGAGGCGCTCATATGTTGATAATCCAGCGTGCTTGAGGTGGTTGTAGGA
CGGTTCATGGCTGTAG-------GGTCAGGTGGTAAAACAAAATTTATTGGTAGGGCGTGAATTGGGTGATGTTGTTGTC
TGGGAAGGAAACCCTCTGCGTCACGAGAAATCAAGATGCGGGG-CGGTGCTTGCATGTCGTGAATGGTCGTGGCGGAAAG
TAGGGGAAGTTCGTGCGGCCTACCGTTGGAATTCAGCGTGCTTAGTAGAGGATGATGATGGTTGTTGGCCTCATGGGGTT
GGATTTCAGCCTGTGGTTTTGTTGTCGACAGGAAGGAAGG----GAGGAAGGAAGCAGGGTGAGTTGTGGTGATTTTGTG
GTTTGGACGTGTGGTGTTCACAGTTTGGTGGGAGCTTGGAGGCAGGAGATTTAGAAGGAAGGGTTGACGATGAGCAGCCG
AAGCCCGCCGCCGAGGGACCGGAGGATGCGTACTGAACGCACCTTGTACCGTGACGCGCCATACCGGAGAGACAGGGACG
GCCGCCGTGGTCCAAACAGGTTTGAGCCGCCTTATTTAATGAAACACGATGAACATTTGCCATCGTATATCAAGCGTTGC
TGCTTTCTCTCCTAACTGTATGCGTTGGCCATAATGCTACCTGAAGAGGCCTTACTCTAGCCCTGGTTTCTATGATGGTA
GCAGGGGCCTGTGTATCCTCTAATTATTTCCTTTACTTGTACTGCAGGTCTGCTAGTGATTTGTGCAACAACTGTAAGCG
TCCAGGGCATTTTGCTAGAGATTGTCCAAATGTGTCTGTCTGCCATGCCTGTGGCCTTCCAGGGTAAGGACTATTACTTG
TTTGGTCATGCGGATCTGAGATTTTGCAGTCTTGTATGTTAGCTCATGTTAAGATCTTCCATTGTGTAGCAAC-TTTTTA
TTGTATTCTTGACTTCTTATTCATAATGATTCAATGTTTTATTT---------TAGCCCTGCTATTTTCTAGTGCACATT
T------------------------------GTTATTTGCTTTTGTATGCCGTATTGTATCTAGAACTCTGTCCATCATC
ATGTAACTATTGCATTTCTTTTCCTGTGGGGTTTTCATGCTTTTAATATTCTAGGTAGACCTAGTTGTTTTCCAGTGCAT
ATTTTACATTGGGTTACCATGATTAATGGTTGCAATTATTTGCTCATGCTTAACCATTTTGAGGCACCTTATGTTCTTGT
CATGTTTAATGAGAAATCTAGTATCAGCGTGAATTGATAGTTTATTTGAGAT-CCCCCACCCCCCTCAAAACAATACACG
TGTCACCTGTCTTAAGTCATTTGTAATCATCTTATGTTAGTACCTTTTTAGTACAAGTGCAAGTGCCTTGTACAAGGATT
TGGTTCATTTTTCATAATTTATTCTGGATGCAAATATATTATCAGAAGGCGGTGGTTAACAAATAATGATACTTGAAGTT
TGAACTGTACATAGATCATAACCATCATAAAAATGACCAGTACATGATAAATTGTGAAGCTTAAGTTGTACTCCCTCCGT
CCTAAAATAAGTGTCTCAACTCTAGTACAACTTTGTACTAAAGTTAGTATAAAGTTAAGACACTTATTTTGAGATGGAGG
GAGTACATAGGTCATACGTTATTCTTCCATGTGACCAGAGGAAAGCC-TGCATAGTACATCCTCTACCTTTCTTCTGAGG
CAAAAACATTGGCCACTCAGTTTTTAAATTTCTGCAGGCACATTGCAGCTGAGTGTTCTTCCAAAGATCTCTGCTGGAAC
TGCAAAGAGCCTGGACACATGGCTAATGCCTGCCCGAACGAAGGGATATGCCGCAACTGTGGCAAATCAGGCCACATTGC
AAAAGACTGCACTGCTCCGCCAATGCTGCCTGGAGAAGTGAAGCTCTGCAACAACTGCTACAAACCAGGGCACATTGCCG
TGGAGTGCACCAACGAGAAGGCCTGCAACAACTGTAGGAAGAGTGGCCATCTTGCCCGTAACTGCACCAATGAGCCTGTT
TGCAACCTCTGCCATGTTGCAGGGCATTTGGCCCGTCAATGCCCCAAATCTGACGAGATCAACGAGAGGGGTGGGCCTCC
TCCCTTCCGTGGCGGCGATGCTCTGTTCCGTGGCGGT---------------------GATGCTCTGTTCCGCGGTGGTG
ATGCTCCCTTCCGTGGTGGCGATGCTCCCTTCCGCGGTGGCGGTGGTGCTCTCTTCCGTGGTGGCTACAGTGACGTGGTC
TGCCGGGCCTGCAACCAGGTTGGCCATATGAGCCGTGACTGCATGGGTGGCGCCTTCATGATCTGCAACAACTGCGGTGG
CCGTGGTCACATGGCTTACGAATGTCCATCTGGGAGGCTCCTGGACCGGTTCCCTCCACGCCGATACTGAACGACTACCA
AGAGCTCTTTCAGATGACTGTTCCTTTTGATCCATCGTGTTGTGAGTCATCATCTTGACGTGCGTCATGTTTTTGATTGT
CAAGGGATTGG-GTATTCCAGTTGTTTCTGCAACTTGTTAGTCTCGTGGTTATTGAATGGCTTCTAGGGTCTTTTCAGAT
CAGACTCCCTTGCTCCCTGTGTTTTGAATAATAATTATTTTCATGGATTAGTGAATACCAAGTGTTTATCTGTAAATTGT
GATTTCAGCTATTTTATTAACTGGATCATTCTGTTGAGAGTGGATCTATATGAATGGAGCGCGTTATGTTAATGCTTACA
AATTTCATGGTCTAAACTGTGTTTTCAG---TATTACTCCCTCCGTCTCAAAATAAGTGTCTTAAGCTTAGTACAAATTT
ATACTAGAGCTAATACAAAATTGAGACACTT------ATTAATACTGTACAATCTTATAACTGGAGCTTGCGTGTGAAGT
GAAATGGATGTACATATTTTTTCTTC---ATAGACAGATGATAAATATTCAGTATGACCATCAAGCGCACAAGCTTAATC
ATACTCTTC-TATTGAAAGCCAATCCACAGACATATACGTAGATAGCAAGCTCGCTTGAAGGTTATCTGGGAAATATTAT
TGGTCAGCGTAACAAGTTCAGGGATGTTCACCACACTTGCAAAA-----AAAAAATAACAGAACAAGAACTACACATGCC
CAGCTCAACACAACTATTTTCACAATGCCATAACTGAACAAGATCATCAGGGAGGCGCTGAGGATGCACTCTATAAGACC
ATCTAATCCAACTTCGCGTAAGCGAATCCGTCGGCACCTT---TCTCGCCGTCGCTTGGCGCCAGATCCTTCAACTATTT
CATGCAGGGG---GGACAAGAAAAGTCAATAAAATTAGCTCCACATATATAGTCACCTTAACAGCCAATTAGCAGATGGC
AGTTTTGCAAACTGCAAAAAAAAATGCACGATACTATTTCTTAGGTAAAGTACAA
>chr1A_5
----TCGATTCCGGC---CCACAAGGGCCACAGCCT-TTTTAAAACTTTGCGTTACGACTTCTAGTCTTCTACGGGTTGC
TCGCTTTCTGTGAGCCGTCCACTGGAGATCGGACGGCTAGGGTGATCACGTGTTCCCTCTTATAGCCTGGATCTGCCTGC
GTCGTCTTCCCGACCGACCGACCGGGTGCGTTCGGTGTCCGGACCTACCCAATCCCAATCCAACATCGCGAGTCGGGGTC
GCTGTCCCTCACCGTCGCCGCCGCGGCTTCCACCCGCTGACCTCCGCCGGAGCTCGCCGGACTCGTAGGGTTTCTTCAGT
CGTCCTCTTCCCTGCTGGAGATCCGCACCCTAGGTAAGCCTCGGTTTCGTCAACTTCACCTGCACCTAATTTGCGCCGTG
TAGGCAGAAATCGGCTA-TCTTCCTCGAGATTTCGTGCCTTTAGCTGTATATACGCGTATCGGCGTATGTTGCCCGAGTA
GATGCGAACCCGCTTGCTGTTGCCCGATGTGGTCGCCGCCCCTAGGGTTTCTTTCGCTGAAGCTTTGGGCTTTGTACGAT
AGGACTTATGAGCATGGCCCGGTGGAACTGTTGAGGCCCTCATATGTTGATAATCCATCGTGC-TGAGGTGGTTGTAGGA
CGGTTCATGGCTGTAGCCTGTAGGGTCAGGTGGTAAAACAAAATTTATTGTTAGGGCGCGAATTGTGTGGTGGTGTTGTC
TGGGAAGGAAACCCT-TGCGTCGCGAGAAATCAAGATGCGGGGGCGGTGCTTGAATGTCGTGAATGGTCATGGCGGAAAG
TAGGGGAAGTTCATGCGGCCTACGGTTGGAATTCAGCGTGCTTAGTAGAGGATGATGATGGTTGTTGGCCTCATGGGGTT
GGATTTCAGCCTGTGGTTTTGTTGTCGACAGGAAGGAAGGAAGGGAGGAAGGAAGCAGGGTGAGTTGTGGTGATTTTGTG
GTTTGGACGTGTGGTGTTCACAGTTTGGTGGGAGCTTGGAGGCAGGAGATTTAGAAGGAAGGGTTGACGATGAGCAGCCG
AAGCCCGCCGCCGAGGGACCGGAGGATGCGTACTGAACGCACCTCGTACCGTGACGCGCCATACCGGAGAGACAGGGACG
GCCGCCGTGGTCCAAGCAGGTTTGAGCCGCCTTATTTAATGAAACACGATAAACATTTGCCATTGTATATCAAGCGTTGT
TGCTTTCTCTCTTAACTGTATATGTTGGCCATAATGCTACCTGAAGAGGCCTTACACTAGCCCTGGTTTCTATGATGGTA
GCAGGGGGCTGTGTATCCTTTAATTATTTCCTTTACTTGTACTGCAGGTCTGCTAGTGATTTGTGCAACAACTGTAAGCG
TCCAGGGCATTTTGCTAGAGATTGTCCAAATGTGTCTGTCTGCCATGCCTGTGGCCTTCCAGGGTAAGGACTATTACTTG
TTTGGTCATGCGGATCTGAGATTTTGCAGTCTTGTATGTTAGCTCATGTTAAGATCTTCCATTGTGTAGCAAC-TTTTTA
TTGTATTCTTGACTTCTTATTCATAATGATTCCAATGCTTTCAATATTCTCAATAGCCCTGCTATTTTCTAGTGCATATT
TTACACCAGATTACCATAATTGTTGGTTGCAGTTATTTGCTTTTGTATGCTGTATTGTATCTAGAACTCTGTCCATCATC
ATGTAACTATTGCATTTCTTTTCCTGTGGAGTTTTCATGCTTTTAATATTCTCGGTAGACCTAGTTGTTCTCCAGTGCAT
ATTTTACATTGGGTTACCATGATTAATGGTTGCAATTATTTGTTCGTGCTTAACCATTTTGAGGCACCTTATGTTCTTGT
CATGTTTAATGAGAAATCTAGTATCAGCGTGAATTGATAGTT-ATTTGAGATCCCCCCACCCCCCTCAAAACAATACATG
TGTCACCTGTCTTAAGTCATTTGTAATCATCTTATGTTAGTACCTTTTT------AGTGCAAGTGCCTTGTACAAGGATT
TGGTTCATTTTTCATAATTTATTCTGGATGCAAATATATTATCAGAAAGCGGTGGTTAACAGATAATGATACTTGAAGCT
TGAACCGTACGTAGATCATAACCATCATAAAAATGACCAGTACATGATAAATTGTGAAGCTTAAGTTGTACTCCCTCCAT
CCTAAAATAAGTGTCTCAACTCTAGTACAACTTTGTACTAAAGTTAGTATAAAGTTAAGACGCTTATTTTGAGACGGAGG
GAGTACATAGGTCATACGTTATTCCTCCATGTGACCAG--GAAAGCCTTGCATAGTACATCCTCTACCTTCCTTCTGAGG
CAAAAACAGTGCCCACTCAATCTTTAAATTTCTGCAGGCACATTGCAGCTGAGTGTTCTTCCAAAGATCTCTGCTGGAAC
TGCAAAGAGCCTGGGCACATGGCTAATGCCTGCCCGAATGAAGGGATATGCCGCAACTGTGGCAAATCAGGTCACATTGC
AAAAGACTGCACTGCTCCGCCAATGCTGCCTGGAGAAGTGAAGCTCTGCAACAACTGCTACAAACCAGGGCACATTGCCG
TGGAGTGCACCAATGAGAAGGCCTGCAACAACTGTAGGAAGAGTGGCCATCTTGCCCGTAACTGCACCAATGAGCCTGTT
TGCAATCTCTGCCATGTTGCAGGGCATTTGGCCCGTCAATGCCCCAAATCCGACGAGATCAACGAGAGGGGTGGGCCTCC
TCCCTTCCGTGGCAGCGATGCTCTGTTCCGTGGCGGC---------------------GATGCTCTGTTCCGTGGTGGCG
ATGCTCCCTTCCGCGGTGGTGATGCTCCCTTCCGTGCTGGCGGTGGTGCTCTCTTCCATGGTGGCTACAGTGACGTGGTC
TGCCGGGCCTGCAACCAGGTTGGCCATATGAGCCGTGACTGCATGGGTGGTGCTTTCATGATCTGCAACAACTGCGGTGG
CCGTGGTCATATGGCTTACGAGTGTCCATCTGGGAGGCTCCTGGACCGGTTCCCTCCACGCCGATACTGAACGACTACCA
TGAGCTCTTTCAG--------TCCTTTTGATCGATCGTGTTGTGAATCATCATTTTGACGTGCGTCGTGTTTTTGAATGT
CTAAGGGATTAAGTATTCCAGTTGTTTCTGCAACTTGTTAGTCTTGTGGTTATTGAATGGCTTCTAGGGTATTTTCAGAT
CAGACTCCCTTGCTCCCTGTGTTTTGAATAATAATTATTTTCATGGATTAGTGAATACCAAGTGTTTATCTGTAAATTGT
GTTTTCAGCTATT---TTAACTGGATCATTCTGTTGAGAGTGGATCTATATGAATGGAGCGCCTTATATTAATGCTTACA
AGTTTCATGGTCTAAACTGTGTTTTCAG---TATTATTTCACATTTTCTTGAGGCAATTGT--CAAATTTGGTAGTATGT
CCTATTTTGCTATCCTCCCAAAGTTTAAAACGTTGCAATTGATACTGTACAATCTTATAACTGGAGCTTGCGTGTGAACT
GAAATGGATGTACATTTTTTTCC-TC---ATAGACAGATGATAAATATTCAGTATGACCATCAAGTGCACAAGCTTAATC
ATACTTTTCTTATTGAAAGCCAATCCACGGACATATAGC-AGATAGCAAGCT-GCTTAAAGGTTATCTGGTAAATATTAT
TGGTCAGCATAACAAGTTCAGGGACGTTCACCACACTTGCAAGAAACACAAAAAATCACATAACAAGAACTACACATGTC
CAGCTCAACACAACTATTTTCACAATGCCATTACTGAACAAGATCATCAGGGAGGCGCTGAGGATGCACTCTATAAGACC
ATCTAATCCAACTTTGCATAAGCGAATCCGTCAGCACCTTCTTTCTTGCCGTCGCTTGGTGCCAGATCCTTCAACTATTT
CATGCA---G---GGACAAGAAAAGTCAATAAAATTAGCTCCATATATATAGTCACCTTAACAGCCAATTCACAGATGGC
A--------------AAAAAAAAATGCACGATACTATTTCTTAGGTAAAGTA---
>chr1D_5
----TCGATTCCGGC---CCACAAGCGCCACAGCCT-TTTTAAAACTTTGCGTTACGACTTCTAGTCTTCTACGGGTTGC
TCGCTTTCTGTGAGCCGTCCACTGGAGATCGGACGGCTAGGAAAATCACGTGCTCCCTCTTATAGCCTGGATCTGC----
GTCGTCTTCCCGACCGACCGACCGGGTGCGTTCGGTGTCCGGACCAACCCAATCCCAATCCAACATAGCGAGTCGGGGTC
GCTGCCCCTCACCGTCGCCGCCGCGGCTTCCCCCCGCTGACCTCCGCCGGAGCTCGCCGGACTCGTAGGGTTTCTTCAGT
TGTCCTCTTCCCTGCTGGAGATCCGCACCCTAGGTAAGCCTCGGTTTCGTCGACTTCACCTGCACCTAATTTGCGTCGTG
TAGGCAGAAATCGGCT-GTCTTCCTCGAGATTTCGTGCCTTTAGCTGTATAC----------GCGTATGTTGCCCGAGTA
GATGCGAACCCGCTTGCTGTTGCCCGATGTGGTCGCCGCCCCTAGGGTTTCTTCCCCTGAAGC-TTGGGCTTTGTACGAT
AGGACTTAGGAGCATGGCCCGGTGGAGCTGTTGAGGCGCTCGTATGTTGATAATCCAGCGTGC-TGAGGTGGTTGTAGGA
CGGTTCATGGCTGTAG-------GATCAGGTGGTAAAACAAAATTTATTGTTAGGGCGCGAATTG---GGTGGTATTGTC
TGGGAAGGAAGCCCT-TGCGTCGCGAGAAATCAAGATGCGGGGGCGGTGCTTGCATGTCGTGAATGGTCATGGCGGGAAG
TAGGGGAAGTTCGTGCGGCCTACGGTTGGAATTCAGCGTGCTTAGTAGAGGATGATGATGGTTGTTGGCCTCATGGGGTT
GGATTTCAGCCTGTGGTTTTGTTGTCGACAGGAAGGAAGGAAGGGAGGAAGGAAGCAGGGTGAGTTGTGGTGATTTTGTG
GTTTGGACGTGTGGTGTTCACAGTTTGGTGGGAGCTTGGAGGCAGGAGATTTAGAAGGAAGGGTTGACGATGAGCAGCCG
AAGCCCGCCGCCGAGGGACCGGAGGATGCGTACTGAACGCACCTCGTACCGTGACGCGCCATACCGGAGGGACAGGGACG
GCCGCCGTGGTCCAAGCAGGTTTGAGCTGCCTTATTTAATGAAACACGATGAACATTTGCCATCGTATATCAAGCGTTGC
TGCTTTCTCTCCTAACTGTATGTGTTGGCCATAATGCTACCTGAAGAGGCCTTACTCTAGCCCTGGTTTCTATGATGGTA
GCAGGGGCCTGTCTATCCTCTAATTATTTCCTTTACTTGTACTGCAGGTCTGCTAGTGATTTGTGCAACAACTGTAAGCG
TCCAGGGCATTTTGCTAGAGATTGTCCAAATGTGTCTGTCTGCCATGCCTGTGGCCTTCCAGGGTAAGGACTGTTACTTG
TTTGGTCATGCGGATCTGAGATTTTGCAGTCTTGTATGTTAGCTCATGTTAAGATCTTCCATTGTGTAGCAACTTTTTTA
TTGTATTCTTGACTTCTTATTCATAATGATTCCAATGCTTTCAATATTCTCAATAGCCCTGCTATTTTCTAGTGCATATT
TTACACCAGATTACCATAATTGTTGGTTGCAGTTATTTGCTTTTGTATGCCGTATTGTATCTAGAACTCTGTCCATCATC
ATGTAACTATTGCATTTCTTTTCCTGTGGGGTTTTCATGCTTTTAATATTCTTGGTACACCTAGTTGTTTTCCAGTGTAT
ATTTTACATTGGGTTACCATGATTAATGGTTGCAATTATTTGCTCATGCTTAACCATTTTGAGGCACCTTATGTTCTTGT
CATGTTTAATGAGAAATCTAGTATCGGCATGAATTGATAGTT-ATTTGAGATCCCCCCACCCCCCTCAAAACAATACATG
TGTCACCTGTCTTAAGTCATTTGTAATCATCTTATGTTAGTACCTTTTT------AGTGCAAGTGCCTTGTACAAGGATT
TGGTTCATTTTTCATAATTTATTCTGGATGCAAATATATTATCAGAAGGCGGTGGTTAACAAATAATGATACTTGAAGCT
TGAACCGTGCGTAGATCATAACCATCATAAAAATGACCAGTACATGATAAATTGTGAAGCTTAAGTTGTACTCCCTCTGT
CCTAAAATAAGTGTCTCAACTCTAGTACAACTTTGTACTAAAGTTAGTATAAAGTTAAGACACTTATTTTGAGACGGAGG
GAGTACATAGGTCATACGTTATTCTTCCATGTGACCAG--GAAAGCC-TGCATAGTACATCCTCTACCTTTCTTCTGAGG
CAAAAACATTGCCCACTCAATTTTTAAATTTCTGCAGGCACATTGCAGCTGAGTGTTCTTCCAAAGATCTCTGCTGGAAC
TGCAAAGAGCCTGGGCACATGGCTAATGCCTGCCCGAACGAAGGGATATGCCGCAACTGTGGCAAATCAGGCCACATTGC
AAAAGACTGCACTGCTCCGCCAATGCTGCCTGGAGAAGTGAAGCTCTGCAACAACTGCTACAAACCAGGGCACATTGCCG
TGGAGTGCACCAACGAGAAGGCCTGCAACAACTGTAGGAAGAGTGGCCATCTTGCCCGTAACTGCACCAATGAGCCCGTT
TGCAACCTCTGCCATGTTGCAGGGCATTTGGCCCGTCAATGCCCCAAATCCGACGAGATCAACGAGAGGGGTGGGCCTCC
TCCCTTCCGTGGCAGCGATGCTCTGTTCCGTGGCGGCGATGCTCTGTTCCGTGGCGGTGATGCTCTGTTCCGTGGTGGCG
ATGCTCCCTTCCGTGGCGGTGATGCTCCCTTCCGCGGTGGCGGTGGTGCTCTCTTCCGTGGTGGCTACAGTGATGTGGTC
TGCCGGGCCTGCAACCAGGTTGGCCATATGAGCCGTGACTGCATGGGTGGCGCCTTCATGATCTGCAACAACTGCGGTGG
CCGTGGTCACATGGCTTACGAGTGTCCATCTGGGAGGCTCCTGGACCGGTTCCCTCCACGCCGATACTGAACGACTACCA
AGAGCTCTTTCAGATGACTGTTCCTTTTGATCCATCGTGTTGTGAATCATCATTTTGACGTGCGTCGTGTTTTTGAATGT
C-AAGGGATTGAGTATTCCAGTTGTTTCTGCAACTTGTTAGTCTCGTGGTTATTGAATGGCTTCTAGGGTCTTTCCAGAT
CAGACTCCCTTGCTCCCTCTGTTTTGAATAATAATTATTTTCATGGATTAGTGAATACCAAGTGGTTATCTGTAAATTGT
GATTTCAGCTA---------------------------------------------------------------------
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>chr1D_3204
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----------------TTAACTGGACCATTCTCTTGAGAGGGGATCTATATGAATGGA--GCGTTATAATAATGCTTACA
AATTTCATGGTCTAAACTGTGTGGTAAGTATTATTATTTCACATTTTCTTAAGGCAGTTGTTGCAAATTTGGTAGTATGT
CCTATTGTGCTATCCTCCCAAAGTTTAAAACGTTGCAATTGATACTGTACAATCTTATAACTGGAGTTTGCGTGTGAACT
GAAATGGATGTACATTTTTTTCC-TTCATATAGACAGATGATAAGTATTCAGTATGACCATCAAGCGCACAAGCTTAATC
ATACTTTTCTTATTGAAAGCCAATCCACGGAGATATAGC-AGATAGCAAGCTCATTTAAAGGTTATCTGGGGAATATTAT
TGGTCAGCGTAACAAGTTCAGGGATGTTCACCACACTTGCAAGAAACACAAAAATTCACATAACAAGAACTACACATGCC
CAGCTCAACACAACTATTTTCACAATGCCATAACTGAACAAGATCATCAGGGAGGCGCTGAGGATGCACTCTATAAGACC
ATCTAATCCAACTTTGCGTAAGCGAATCCGTCGGCACCTTCTTTCTCGCCGTCGCTTGGCGCCAGATCCTTCAACTATTT
CATGCA---GGGGGGACAAGAAAAGTCAATAAAATTAGCTCCACATATA----CACCTTAACAGCCAATTCGCAGATGGC
AGTTTTGCAAACTG--AAAAATAATGTACGATACTATTTCTTAGGTAAAGTACAA
>SNPs
SSSS-----------SSS------------------S----------------------------------------S--
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
S---------------------------------------------------S---------------------------
-------------------------S-----------------------------------S------------------
-SS------------SS-------S-------------------------------------------------------
-------------------------------------------------------SS------------------S----
---------------------------------------------------------------S----------------
--------------------------------------------------S-------S------S---S--S-------
---------------S------S----------------------------------------------S----------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
---------------S----------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------S-SSSS--SSSS--------------------------------S---
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
------------------------------------------S-----------------------------------S-
-------------------------------------------------SSSSSS-------------------------
------------------------------------------------------------------------------S-
-----S----S---------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------SS----------------------------------------
-----------S-------S------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-------------S----------------------S-----------------------------------S-----S-
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
---------------------------------------------S-------S------------S---------S---
-S-S--SS-S----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------SSS---------------------------------------------------S------------
------------------------------------S-S-SSSSS-SSSS--SSS---SSS-SS-SS--S-SSSSS--S-
SSSS-S-S----SSSSSSS-SS-SSSS-SSS---------S-------------------------------------S-
---------------S-----S-S--------------------------------------------------------
-----S----------------------S--------SSS-----------------S----------------------
------------------------------------------S-------------S---S-------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
------SSS-------------------------------------------------------------S---------
--------------S----------------------------------------
>forward_743
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---GAAGGAAACCCTCTGCGTCA---------------------------------------------------------
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>reverse_2691
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--------------------------------------------------TGACGAGATCAACGAGAGGG----------
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>forward_2415
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---------------------------------------------------------------------------GGAAC
TGCAAAGAGCCTGGA-----------------------------------------------------------------
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>reverse_3991
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----------------------------------------------------------------------AGCAGATGGC
AGTTTTGCAA---------------------------------------------
