>input_sequence_40645
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-------------------------------------------AGCAAATACTCCATCCGTCCGATGATGTAAGGCGTTT
TTGACTCATACATTATGAGACAGAGGGAGTAATTTCCTCCGGGAAAAAATAGTACTGTATGTCATTGTTGGCTTGTTGCA
TTCACATGTAAATGTAGTTTCGACTTGTTTGCCACTTTGGTGCCTTGCAACAAACTCCACTGCTACT---CAATGGAGAC
ATTT------GCACAGGAAAAGAAATGAAAATGT---------GTGTGCCGGAATCTTGGCACGTAAGGCACATTCACG-
----GTCACAGGGCCAGAGAATCCTAAGACATGGAGAACCGGGTTAACCAGAGACCCT-CCCTAATCTGTAATATTTGCA
TTGGTACTAT---ACTAATCATAGTTGGTGGGT-----GGACTAATGGCCCGCGCCACCGCTAACCAATGGCCCATCTGT
AACTGCTCCACCGCTTCGGCACACCAACAAAACCGACAACAGGGGAGCCGAGAGCGGCAAGCCACTGGACGCTAGCTGC-
----------TAGTCCCATCCTCCGCTCGCTAGCTAC-----CTCTCCGTGCGGCGGGATGAAGCAGCCGGCGGCGAGCC
CGGGGCGCGCGGAGAAGCCGCCGCAGCAGCAGCAGCTGCCGGCGCCGCCGGGGCTGGCGCGGCTGCTGCTCAGCAAGAGC
CGGCGCGGGGCGCGGTCGCGCCGCGCGCCGGCCACGTCGCCCATGTTCGTGTCCCGGGGCCGGAGCCGCGCGGCGGCGGC
GG---------CGGACGGGGAGCCCTCGTCGCCCAAGGTCACCTGCATTGGCCAGGTGCGGATGCGCAAGGGGAAGAAGG
GCAACAAGAAGGGGCCCCCGGCGCCGCCGCTACCGCC------GGCCAAGGAGGAGAAGGCCAGGGGCTACTGCCGGTGC
CTCAAGAAGGCGTTCCTCTGCGGCGGGCTGTTCGACTTCGACCGGACGCGCCGGCGCAAGGGGCCTGCGCCGGAGGCGGA
GCGGACCCGCCGGTCGCCGTGGGTGTTCAGCAGCAGGGACGTGGCCGTCGCCGCCGCGCCCAAGCCGCCGGATCCGGCCA
GCGACCGCGCCGAGGAGGAGGGGGAGGAGGACGACAAGTCGGTGGGGGCCTTCGGCTCGGTGGAGAGAGACGAGAAGGCG
GACGAGCCGGGGACCGACAGCGGTGGCACGGAGGAGGAAGGGTGCGAGGAGGGGGAGGCGGCGGAGCTCGTGTCGTCAGG
GACCACCACGCCGCCCAAGAACGCTCTGCTCCTCATGCGCTGCCGCTCCGCGCCGCAGAACCGCTCGTCCCCGCTCACCT
CCAGGTTCGCCGCCGGCGCCGCGCCGTCGCCGGTCCAGGAA---GCGGCCGATTACGCGGTGGAGTCGATCGCCGCGACA
CCACCACGGGCGTCGCCCTCCCCGCGCAAGCCGGAGATGCTATCACCTTGGGCGTCTCCGTCTCCACGCAAGCCGGACAT
GCTATCACCTTGGGCGTCTCCGTCTCCACGCAAGCCGGACATGCTGTCACCTTGGGCGTCTCCCTCCCGTCGCAAGCCGG
ACATGTTGCAGTCACCACGGGCGTCGCCATCTCCCCGCAAGCCGGACATGGTGGCGGTGGAAGGCAACGACGAGAAGCGG
CAAGAAATGGCAGTATCCACGCAGGAAGACGAGGAAAAGATGCTCGAACAAAAGCACGAAGCCGACGAC-----------
----GACGAAGCGGAAGAGATGAGGTGCTCGTCGGCGCGGCCGCTGGTGCTGCAGAGGTGCAAGTCAGAGCCGGCGACGA
CCGCGGCGGCGAAGATGGCGGCCGGTGCGGGGGCCGAGGGGGCGCCGTCCGGCTGCTTCTGGGCCAACGGCGGGAGCAGC
GGCCGGCGGAGGCACGCGCCGCAGATGTCGCCGGCGGCCGCCG---CTCCGGTGGCTTTGACCGGTCACTGAGTGAGTAG
-------------GTGGGGACCCCTAGCTGTCTCCCGTATACTAGTAGTATTTTCCTTTTGTTGCTGTCGCTGTCGATTA
AA------------------------------------------------------------------------------
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>chr1D_1_TraesCS1D01G066800
GGAGACGCAAACCGATCTTAGATCGGAAAAACAGGAAAAAAAAAGTCGATCAAGATAACTGGCGGGAGAGAGAAAAAGCC
GAAGCAAGAGTTCGGGAAAAAGACTCTTTAGGACAGCCGGTCAAGACGACCGGCGAACGAACCCCAGGTACGGGCGACGC
GGCGCCTGGTGGCGGTCATGGAGGCCGACCGCCCCGAAGGCGGCGCAGGTGTAGAAGCGGCGGTGGCTAGGATTTAGAAC
CGGAAACTCTACAGTCTCCGCATGACGATCACGAGTAGAAATCGCCGCATA---TACACACGATCTACGACGCTCAACAT
GGGCACTACCAAGGCGTACCCGGCGTCTGGCTGAGAGATCTACGGGGTGCATAGTAGCACCCGTCGTTCGATTTGCCCTC
ATCATCATGAGCGGCAGCAGCAGCCACGGCCTCGGAGAGGCGCAGAGGGCGACGGGTGAGTGAATGGACGAAACGATTGA
TGTGCGACGAAAGAAGCTTTGTTGGACGACGAAATCAAGGAAAGCAGAGCAGCAGAGCAGAGAGAGA--AAAAGAGATGG
GACGGCGGCGAGCCCGCAGTCGCAGGCAGGATGGCGAAGCAGAGAGGGGCAAGAGATTCAGTGCTCGATCGATCAGATCA
CGTCCAGCG----------CCTCACCTGTCACCGCTGCGGGGGTACGGACAACTCATGTTCACAGTGCGCGGCCGCAGCA
G-GGCAGGGTGCACCGCACTCTT----CCTCCAACCTGACCCTTCCTTCCTTCGTCCCTCCACGACAG------------
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-------------------------GAGAGGAGAGGGGAAGAGAGGAGAGGTCGGAGGC-----------GGGTCGACGG
TGGGCCCCACATCACGCCGGGGGACAAGCCCACGAAACTGTAATAAATGCCCACATCACCCTAGATCATGTACCGCTGCT
GGTTTTTATTTTTGAGAAAACACTGCAGGTTTTCATTTCAAACATATATGCCCCT-------------------------
----------------------------------------------------------AAAAAATATTGAAAAATATATA
------------GGAGTACTACGACGAGACTGTGTTGTTATTAAGCAAATACTCCATCCGTCCGATGATGTAAGGCGTTT
TTGACTCATACATTATGAGACAGAGGGAGTAATTTCCTCCGGGAAAAAATAGTACTGTATGTCATTGTTGGCTTGTTGCA
TTCACATGTAAATGTAGTTTCGACTTGTTTGCCACTTTGGTGCCTTGCAACAAACTCCACTGCTACT---CAATGGAGAC
ATTT------GCACAGGAAAAGAAATGAAAATGT---------GTGTGCCGGAATCTTGGCACGTAAGGCACATTCACG-
----GTCACAGGGCCAGAGAATCCTAAGACATGGAGAACCGGGTTAACCAGAGACCCT-CCCTAATCTGTAATATTTGCA
TTGGTACTAT---ACTAATCATAGTTGGTGGGT-----GGACTAATGGCCCGCGCCACCGCTAACCAATGGCCCATCTGT
AACTGCTCCACCGCTTCGGCACACCAACAAAACCGACAACAGGGGAGCCGAGAGCGGCAAGCCACTGGACGCTAGCTGC-
----------TAGTCCCATCCTCCGCTCGCTAGCTAC-----CTCTCCGTGCGGCGGGATGAAGCAGCCGGCGGCGAGCC
CGGGGCGCGCGGAGAAGCCGCCGCAGCAGCAGCAGCTGCCGGCGCCGCCGGGGCTGGCGCGGCTGCTGCTCAGCAAGAGC
CGGCGCGGGGCGCGGTCGCGCCGCGCGCCGGCCACGTCGCCCATGTTCGTGTCCCGGGGCCGGAGCCGCGCGGCGGCGGC
GG---------CGGACGGGGAGCCCTCGTCGCCCAAGGTCACCTGCATTGGCCAGGTGCGGATGCGCAAGGGGAAGAAGG
GCAACAAGAAGGGGCCCCCGGCGCCGCCGCTACCGCC------GGCCAAGGAGGAGAAGGCCAGGGGCTACTGCCGGTGC
CTCAAGAAGGCGTTCCTCTGCGGCGGGCTGTTCGACTTCGACCGGACGCGCCGGCGCAAGGGGCCTGCGCCGGAGGCGGA
GCGGACCCGCCGGTCGCCGTGGGTGTTCAGCAGCAGGGACGTGGCCGTCGCCGCCGCGCCCAAGCCGCCGGATCCGGCCA
GCGACCGCGCCGAGGAGGAGGGGGAGGAGGACGACAAGTCGGTGGGGGCCTTCGGCTCGGTGGAGAGAGACGAGAAGGCG
GACGAGCCGGGGACCGACAGCGGTGGCACGGAGGAGGAAGGGTGCGAGGAGGGGGAGGCGGCGGAGCTCGTGTCGTCAGG
GACCACCACGCCGCCCAAGAACGCTCTGCTCCTCATGCGCTGCCGCTCCGCGCCGCAGAACCGCTCGTCCCCGCTCACCT
CCAGGTTCGCCGCCGGCGCCGCGCCGTCGCCGGTCCAGGAA---GCGGCCGATTACGCGGTGGAGTCGATCGCCGCGACA
CCACCACGGGCGTCGCCCTCCCCGCGCAAGCCGGAGATGCTATCACCTTGGGCGTCTCCGTCTCCACGCAAGCCGGACAT
GCTATCACCTTGGGCGTCTCCGTCTCCACGCAAGCCGGACATGCTGTCACCTTGGGCGTCTCCCTCCCGTCGCAAGCCGG
ACATGTTGCAGTCACCACGGGCGTCGCCATCTCCCCGCAAGCCGGACATGGTGGCGGTGGAAGGCAACGACGAGAAGCGG
CAAGAAATGGCAGTATCCACGCAGGAAGACGAGGAAAAGATGCTCGAACAAAAGCACGAAGCCGACGAC-----------
----GACGAAGCGGAAGAGATGAGGTGCTCGTCGGCGCGGCCGCTGGTGCTGCAGAGGTGCAAGTCAGAGCCGGCGACGA
CCGCGGCGGCGAAGATGGCGGCCGGTGCGGGGGCCGAGGGGGCGCCGTCCGGCTGCTTCTGGGCCAACGGCGGGAGCAGC
GGCCGGCGGAGGCACGCGCCGCAGATGTCGCCGGCGGCCGCCG---CTCCGGTGGCTTTGACCGGTCACTGAGTGAGTAG
-------------GTGGGGACCCCTAGCTGTCTCCCGTATACTAGTAGTATTTTCCTTTTGTTGCTGTCGCTGTCGATTA
AATCTAGCACG----GTAAAGCTGTAATTCCCCCATTCTCATTTCTCCGTCCATCCATGC--------------------
---CCTGTAAAAAGATTTACGTACCTAGTCACGCTGTAAATCTTCTCCTGCTGCCACTAGCACTGCCACTACTGCTTGTT
TATCTACCACT-----------------GGTGTAGCCACGATGCGTCTGTTA-ATCCAACCATCTCTAGTGCGACTGTGC
CAGTACCAGTACTATAC----CCAATAATCTGGCATAG--TACATGTACCAGTATACAGAAAGTATACTGTTAAGTACGT
TGTAGATTTAACAGTGCCATGAATGAGCTTTGTCCTTGGAAAAC-ATTAAACACAACTTGCACACCTGCTTCACTCAACT
GTGCCTCCCAACTTTTTA--CCCCACCCACTCCGGCAGCAGATGTAC----TACTAGTACTAGCTAGGA----------G
TAACCGTGCCCATGTTTGG---GCTGCAGAAATAACAGGTCC-CTGTGCGAAGGAGATTCCGGGCAGCGATCACTCTCGC
GCCCCTGTTTGCAGCAGCCATCTCGTTCTCGTGAGAGCTACAGCGAGCTCCTCGTAGTTGCAGGGCGAAAGAATCCGTGA
CCGCGACGCTTCTGATCCAATCCAAGCCACCTTACGTTACACTACAT--------TTACACGAGAAGCCAGTGC------
-TCTGAACCAACCACGGTATAGGAAAAGAAAAAAAGGATCGGCGGGGAAAAAAATTAGCTGGATCAGAGGAATTGAT--G
AGGTTTGACTTGGAAACATGGCGTGAGAACCGACTAAACACTCATAGTGCAGCGGAGCGACCGACCGTGCGTCGTGCACA
CGTGCGTGGGAGGGCGCACTAGTTGACCTGCAGA-CACTGCAGATCAGTGG--GTGTGTATGTATGAGATGGCATAAATA
GTTCACCTTTTGTTTTAGATTATTCTGTATCGTACTAGTGTGCTCCAATGTGGCGGCACGAGAGGCGGCAAGTCTCGTGG
CTGTCATCTCGAGATCTACAAGACAAGTGCTGCTCATGGCGATCGAGTTTTCTT
>chr1B_247
CTCTAAT-------------------------------------------------------------------------
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-------------GTCTCCGCATGACGATCACGAGTAAAAATCGCCGCATGTACTACACACGATCTACGACGCTCAACAT
GGGCACTGCCGAGGCGTATCCGGCGTCTGGCCGAGAGATCTACGGGGTGCATA-TGGCA---------------------
-TCGTCTTGGGCGGCAGCAGG------GGCCTGGGAGAGGGGCAGAGGACGACGGATGAGTGAACGAACGAAACGATTGA
TGTGAAACGAAAGAAGCTTTGTTGGACGATGAAATCAAGGAAAGCAGAGCAGCAGAGCAGAGAGA-A--AAAAGAGATGG
GACGTCGGGGCGAG----CTCGCAGGCAGGAGGGCAAAGCAGAG--GGGCAAGAGATTCAGTGCTCGATCGATCAGATCA
CGTCCAGA----------CCCTCACCTGTCACCGCTGC-GGGGTACGGACAACTCATGTTCACAGTGCGC------AGCT
G-AGCAGAGTGCACCACACTCTT----CCTCCAACTTGAC----CCTTCCTTCGTCCCTCCACGAGAC------------
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-------------------------GAGAGGAGAGGTCGGAGGTGAAAGAT-----------GGATGGATGGGTCGACGG
TGGGCCCCACAA------GGGGGACAAGCCCACGAAACTGTAATAAATGCCCACATCA-CCTAGATCATGTACCGCTGTT
GGGTTCATTCCAGAAATATATACTAC-----------------------CTACTGGATGGAAGGTGCAGTTTTATTTAAG
CAAATGATTTCCTCCAGAAAAACATGCCATCGTT---GGCTCGTTGCATTCGCATGTAAAAAAATATTCAAAAATATATG
GGAATATATATTGGAGTACTACGACTAGATGGTGTTGTTATTAGGCAAATA-----------------------------
-------------------------------ACTCCCCCAG--AAAAAGAA------TATGTCCTTGTTGGCTTGTTGCA
TTCGAATGTAAATGTAGTTTCGACTTCCTTGCCACTTTGGTGCCTTGCAACAAACTCCACTGCCACT---TAATGGAGAC
ATTTTTTTTTGCAAAAGAACTGAAATGAAAATC----------GTGAGGCGGAATCTTGGCACGGAAGGCACATTCACCG
GGT-----------CAGAGAATCCTAAGACATGGAGAACCGGGTTAAACAGAGACCCTCCCTTAATCAGTAATATTGGTA
GTAGTAGTAGTACACTGATCATAGTTAGTGGGTGGG-----CTAATGGCCCGCGCCACCGCTAACCAATGGCCCATCTAT
AACTGCTCCACCGCTTCGGCAGACCAACAAAACCGACGACAGGGGAGCCGAGAGCGGCAAGCCACTGGACGCTAGCGCTC
GCATCTTC-------------------CGCTCGCTAC-----CTCTCCGTGCGGCGGGATGAAGCAGCCGGCGGCGAGCC
CGGGGCGTGCGGAGAAGCCC---CAGCAGCAGCAGCTGCCGGCGCCGCCGGGGCTGGCGCGGCTGCTGCTAAGCAAGAGC
CGGCGCGGGGCGCGGTCGCGCCGCGCGCCGGCCACGTCGCCCATGTTCGTGTCCCGGGGCCGGAGCCGCGCGGCGGCGGC
GGCGGTGGGGGCGGACGGGGAGCCGTCGTCGCCCAAGGTCACCTGCATTGGACAGGTGCGGATGCGCAAGGGGAAGAAGG
GCAGCAACAAGGG---GCCGGCGGCGCCGCCCCCGCCACCG---GCCAAGGAGGAGAAGGCCAGGGGCTACTGCCGGTGC
CTCAAGAAGGCGTTCCTCTGCGGCGGGCTGTTCGACTTCGACCGCAAGCACAAGCGCAAGGGGCCTCCGCCGGAGGCGGA
GCGGACTCGCCGGTCGCCCTGGGTGTTCAGCAGCAGGGACGTGGCCGTCGCCGCCGCGCCCAAGCCGCCGGATCCGACGA
GCGACCGCGCCGAGGAGGAGGGGGAGGACGAC---AAGTCCGTGGGGGCCTTCGGCTCGACGGAGAGAGACGAGAAGGCG
AGTGACCCGGGGACCGACAGCGGTGGCAAGGAGGAGGAAGAGTGCGAGGAGGGGGAGACGGCGGAGCTCGTGTCGTCCGC
GACGACCACGCCGCCCAAGAACGCTCTGCTCCTGATGCGCTGCCGCTCCGCGCCGCAGAACCGCTCGTCCCCGCTCACCT
CCAGGTTCGCCGCCGGCGCCGCGCCGTCGCCGGTCCAGGAA---GCGGCCGATTTCGCGGTGGAGTCGATCGCCGCGACG
CCACCTCGGGCGTCGCCCTCTCCGCGCAAGCCGGA------------------------------------------CAT
GGTGTCACCTTGGGCGTCCCCCTCCCCGCGCAAGCCGGACATGCTGTCACCTTGGGCGTCTCCCTCCCGGCGCAAGCCGG
ACATGTTGCAGTCACCACGGGCGTCGCCATCTCCCCGCAAGCCGGACATGGTGTCCGCGGAAAGCAACGACGAGAAGCGG
CAAGAAATGGCAGTATCCACGCAGGAAGACGAGGAAAAGATGGTGGAACAAGAGCACGAAGCCGACGACGACGACGAGGA
GGATGACGAAGCGGAAGAGATGAGGTGCTCGTCGGCGCGGCCGCTGGTGCTGCAGAGGTGCAAGTCGGAGCCGGCGACGA
CCGCGGCGGCGAAGATGGCCGCCGGGGCCGGGGCCGAGGGGGCGCCGTCCGGCTGCTTCTGGGCCAACGGCGGGAGCAGC
GGCCGGCGGAGGCACGCGCCGCAGATGTCGCCGGCGGCCGCCG---CTCCGGTGGCTTTGACCGGTCACTGAGTCAGTAG
GTGGGGACCCCTAG-------------CTGTTTCCCGTATACTAGTAGTATTTTCCTTTTGTTGCTGTCGCTGTCGATTA
AATTTAGCACG----GTAAAGCTGTAATTCCCC-A--CTCTTTTCTCCATCCATCCATCCATGCCGCTCGGGCGAAGACG
ATGCCTGTAAAAAGATTTACGTACCTAGTCACGCTGTAAATCTTCTCCTTCTGCCACTAGTACTACTACTACTAGTTGTT
TATTTACCACTGTATTATGCAAAGT----GTGTAGCCACGATTCGCCTGTTG-ATCCAACAATCTCTGGTGCGTCTGTGC
CAGTACCAGTACAGTACCATACCAATAATGTGGCATAGTGTACATGTACTGCTATACAGAAGGTATACTGTTAAGTACTT
TGTAGATTTAACAGTGCCATGAATGAGCTTGTCCG-----------------------TGCACACCCGCTTCACTCAAGT
GTGCGTGCAAACTTTTTACCCCTCACCCACTCCAGCAGCAGATGTACGTGGTAGTAGTACTAGCTAGGAGTTACTGGTGG
TAACCGTGCCCATGTTTGGAGGGCTGCAGAAATAACAGGTCC-CTGTGCGAAGGAGATTCCGGGCAGCGATCGCTCTCGC
GCCCCTGTTTGCAGCAGCCATCTCGTTTTCGTGAGAGCTACAGCGAGCTCCTCGTAGTTGCAGGGCGGAAGAATCCGTGA
CCGCGACGCTTCTGATCCAATCCGAGCCACGTTATCTTACAC---------TACATTACACGAGAAGCCTGTGCTCTGAG
GTCTGAACCAACCACGGTAAGAAAAGAAAAAAAAA------------------------TGGATCAGAGGAATTGATGAG
AGGTTTGACTTGGGAACATGGCTTGAGAGCCGACTAAACACTCATGATGCAGCGGAGCGACCGACCGTGCGTCGTGCACA
CGTGCGTGGGAGGGCGCACTAGTTGACCTGCAGAACACTGCAGGTCAGTGA--GTGTGTATGCATGAGAGGGCATAAATA
GTTTACCTTTTGTTTTAGATTATTCTGTATCGTACTAGTGTGCTCCAGTGTGGCGGCACGAGAGGCGGCAAGTCTCGTGG
ATGTCATCTCGAGATCTACGAGTGCTGTT----TCACGATGATCGGGTTTTCTT
>chr1A_345
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---------------------------TGGCTGAGAGGTGCACGGGGTGCATA-TAGCACTTGTCGATCGATTTGCCCCT
GAACATCGTCAT-------GG------GGCCTGGGAGAGGGGCAGAGGGCGACGGGTGAGTGAATGGACGAAGCGATTGA
TGTGAGACGAGAGAAGCTTTGTCGGACGATGAAATCAAGGAAAGCAGAGCAGAGCAGAAAGAAGAAAAGAATAGAGATGG
GACGGCGGGGCGAGCCTCCTCGCAGGAAGGAAGGCAAAGCAGAG--GGCCAAGAGATTCAGAGCTCGATCCATCAGATCA
CGTCCAGCCGTCCACCTTCCCTCACCTGTCACCGCTGGGGGGGTACGGACAACTCGTGTTCACAGTGCCGCAGCAGGGCA
GAAGCAGAGTGCACCACACTCTTTCTTCCCCCAGCTTGAC----CCTTCCTTCTTTTGAGGCCAACTCCACCGCGCGACT
CTATCCTGTCCGGCCCCGTCCGTTTGAGATAAAAGGGACAAAAAAGGCGGCCCAGCGCGCGGGAGCAAACGGACTTTTGT
CCGCTTTGTGTCCGCTTTTGACCCATCCCCGGCCCAAACTTGCGCCAGTTTTGGGGTGAAACGGACAGCGCGCAGACGGG
CGGGACGCGCGCGCTTGTCCTCCCCTGGCCCGCCTGTCGGTGGGAGAAACCAAAAAAAACCCGACGGCCATTTGGCGCCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCCGGTGGCCTGGCCGTCGACCCGACCGC
AAAGGTGAAGAAGAAGGCACCAAGGAAGCCGCGGTTGAAGTACACGCCGGAGGAGATCGCCAAGTTGGACGCGGAATCGG
CGAAGAGGAGGGAACGGAGAGCGGCCGTCAAGATGAATGCCGCCGCGGCCAAGTTCGCCGCCTAGCGCGAGGAGCTAGAG
GCCGTGCGGCGCAAGGCCGCTGCCGACGAGAAGGAGGACCTCGTCAACAAAGCGCACGCCATCCTCATGCTTGGCATGGG
CTGTCCGGCGGGGTTCCATGCAGCGGCCGTCGGCCCGGCGAGCACAGGCTCGTCGGTCGCCCGACCTACGCACTGTCAGT
CGCCGACGTCGCGCGCCGCGCCCATGTCGCCCGGCTTTCCTCCACCCAGGCACGACGGCCAGACCCGTTTCTCGGTGTCG
CCGGACGTGGGCTTGTTCGCGCCGTCCACACCACGCCCCGCGGCCGTCATCGACCTCAACGTGACGCCTGGGTCCAGCAG
CGGCGGGCGGCCTTCCGTCGAGATGCAAAGAAAGCAGGCGCGTGCACCATTCACGGGCACCATGCCGGCCCCCCGCGTGT
TGTTTGACGAAATGCCAACCTCAACGCCGACGGTGGACGACCCCTTCTACAACCAGTACATGGAGGACGTGATCTTCCAG
GGTGGGCATGGCCGTGCCTACGACCCCGATGAGACCCAAAGTCAGGATGGCCGCACCCAGTACGTGCTCGATGAAGAGGC
CGACGACCGTGCTGACTACGACCATGGTGATTCGTGGCATGAAGACGATGACATCTATGTCGAAGGTGAAGATGAAGATG
AAGCCAATGATGTTGATATTAGTGGCGCTCCATTGTTCATAGACGAGCTCACCCAAAGAGCGGAAGCACAAAAGAAGCGG
AAGAGCATTCGCACCGGTTCATATACACAAGATGAGGATAAATTGATTTGCCAATATTGGATGGAGATTAGCCAAGATCA
AAGGACCGGCGCGCAACAAAAGGGCATTGTTTTTTGGATGAGAGTCCACAAAACATTCCATGAAAGGAAGATGTTTGAGC
CCTACCAAATTACAAGCAACCGTGGCATCGGTTCGATTCAAAAAAGATGGTTGTCCATCCAACAAGAGTGCAACAAGTAT
TGTGCCGCATTTGAGAGCGTTGAAGCACGGCCCGTGAGTGGTCTCGGCGTTGGAGACATGGTATGCTCTTCTCTTTCTAG
CCCTTACTACGGCCACGAGACTTCGGTCGTGTATATGTTTGCATGTTCACTTGTTCTTGATCATGTGGTGTAGGCATTTC
AATCTTTGGAGGCATTCAAGGCCCGGCACAATGACAAGTCATTCACTCTTACGCATTGTTGGACGATCATCAACAATTGC
CCTAAGTTCAAGGATCAATACCGTGAACTTCAAAGGAAGAGAGGCAAGAAGACGGCCAAGTTCGCCGGAGGTGGGGATGG
CGAGGCGTTGGAGAGGCCGAGGGGTAAGACCAACTCAAAGGTGGACGACATACGTGACGCCTCATCCATGGCCTTGCATG
AGACTTTGCATGGCATGATGTCACATAAGGATGTGAGGGACGAGAAGAAACGTCAAAGCAAGGACGAGCAAATGAAGCAA
TACCTAGACCTCCAACGACAAAAGCTTGAGATGGAGGAGGCGGCCAAGAAGAGGAAGATAGACATGGAGGAGGCGGCCCG
GCAAAGGCAGCTCGACATGGAAGAGGCCGCCCGGCAAAGGCAGATCGACATCGAGGCCGACAACGTCAAGGCCAGGCAGA
GGCAGCTCGACATCGAGGCCACCAATGCCGCCACGAAAGCGAAGGAGGTGGCCCTTGCGATCATGAGCGTGGACTTGTCG
AAGATGAGCGACAAGACGAGGGCCTGGTTCGAGGCCAAGCAGAAGGAGATGCTCGACGCCGAAGGCCTGAACTAGGTCGT
CCGATCGGCGTGGTCGTTCTTTTTGGAGACTGGCATGGGTGCCGCCCGCCCGTTGGGCCGTTGGCAATGTGCCGCGAAAA
AACATTCATTTTGGAGGCCGGCTGTGTTGCCGGCGAGGACAACTATTCATTTTGGAGGTTGTCTGTGTTGCCGGCCGCTG
GCTGTGTTGTCGGCGATGGTCGTGTAGGCCGCTGGCTTTGTTGCCGGCGTGATGAACTCGGGTCGTGAACTGGGGCTTGG
CATTTGAAACGTTCCTTTTTTTTAAATAGACGCGGACAGGATGAGGCAAAAGGATGTGGCCGCGCGCTGGGCGCACGGCC
ACCGCATCCCAGGACAGGCCCGGACACGACCCCAAATCCCTATCCAAAGGGACAAAAACCGGACAAAACGGACGTCCGTT
TGAAGTCGCGCGGTGGAGTTGGCGTGAGAAGAGAGGAAAGGAGAGGATAGGTCGGAGCTCAAGGACGGATGGGTCGACGG
TGGGCCCCGCAAG-----GGGGGACAAGCCCACGAAACTGTAATAAATGCCCACATCA-CCTAGATCATGTACCGCTTGT
TT--------------------------GGTTTCATTTCAAAAATACAACTACTGGATGGATGGTGCAGTTTTATTCAAC
CAAATAATTCCCTCCGGAAAAACATGTCCTCATTCTTGGCTCGTTGCATTCGCACGTAGAAAGATATTCAAAAATATTTA
------------GGAGTAATACGACTAGATGGTGGTGTTGTTAGGCAGATA-----------------------------
-------------------------------ATTTCCTCCAGAAAAAAGAA------TATGCCCTTGTTGGCTCGTTGCA
TTCGCATGTAAATGTAGCTTCGACTTGTTTGCCGTTCTGGTGCCTTGCAACAAACTCCACTTCTACTGGCTAATGGAGAC
ATTT------GCACCAGTAGAAAAAGAAAGAGGTGTGGAACATGTGAGCCGGAATCTTGGCACGTAAGGCACATTCACAG
GAGAGTCACAGGGCCAGAGAATCCTAAGACATGGAGAACCGGGTTAACTAGAGACCCT-CCCTAATCAGTAATATTGCTA
CTAGTACTAT---ACTAATCATAGTTAGTGGGTGGAGTGGACTAATGGCCCGCGCCACCGCCAACCAATGGCCCATCTAT
AACTGCTCCACCGCTTCGGCGGACCAACAAAACCGAGG---------------GCGGCAACGCACTGGACGCTAGCTAGC
TGCTAGTCCGTAGTCCCATCCTCCGCTCGCTCGCTCGCTCTGCTCTCCGCGCGGCGGGATGAAGCAGCCGGCGGCGAGCC
CGGGGCGCGCGGAGAAGCC------------GCAGCTGCCGGCGCCGCCGGGGCTGGCGCGGCTGCTGCTCAGCAAGAGC
CGGCGCGGGGCGCGGTCGCGCCGCGCGCCGGCCACGTCGCCCATGTTCGTGTCGCGGGGCCGGACCCGCGCGGCGGCGGC
GGCGGCGGGGGCGGGCGGGGAGCCGTCGTCGCCCAAGGTCACCTGCATTGGCCAGGTGCGGATGCGCAAGGGGAAGAAGG
GCAGCAAGAAGGGGGCGCCTGCGGCGCCGCCCCCGCCGCCGCCGGCCAAGGAGGAGAAGGCCAGGGGCTACTGCCGGTGC
CTCAAGAAGGCGTTCCTCTGCGGCGGGCTCTTCGACTTCGACCGGACGCGCCGGCGCAAGGGGCCGCCGCCGGAGGCGGA
GCGCACCCGCCGGTCGCCCTGGGTGTTCAGCAGCAGGGACGTGGCCGTCGCCGCCGCGCCCAAGCCGCCGGATCCGGCCA
GCGACCGCGCCGAGGAGGAGGGGGAGGAGGACGACAAGTCGGCGGGAGCCTTCGGCTCGGCGGAGAGATACGAGAAGGCG
AGTGACCCGGGGACCGACAGCGGTGGCAAGGAGGAGGAGGAAGAGTGCGAGGAGGAGGCTGCGGAGCTCGTGTCGTCGGC
CACCACCACGCCGCCCAAAAACGCTCTGCTCCTCATGCGCTGCCGCTCCGCGCCGCAGAACCGCTCGTCCCCGCTCACCT
CCAGGTTCGCCGCCGGCGCCGCGCCGTCGCCGGTCCAGGAAATGGCCGCCGATTTCGCGGCGGAGTCGATCGCCGCGACG
CCACCTCGGGCGTCCCCCTCCCCGCGCAAGCCGGA------------------------------------------CAT
GGTGTCACCTTGGGCGTCCCCCTCTCCGCGCAAGCCGGACATGGTGTCCCCTTGGGCGTCTCCCTCCCCGCGGAAGCCGG
ACATGTTGCAGTCACCACGGGCGTCGCCATCTCCGCGCAAGCCGGACATGGTGGCGGTGGAAAGCAACGACGAGAAGCGG
CAAGAAATGGCAGTATCCACGCAGGAAGACGAGGAGAAGCCGCACGAACAAGATCACGAAGCCGACGACGAGGAGGAGGA
GGAAGACGAAGCGGAAGAGATGCGGTGCTCGTCGGCGCGGCCACTGGTGCTGCAGAGGTGCAAGTCGGAGCCGGCGACGA
CCGCTGCGGCGAAGATGTCTACCGGTGCCGGGGCCGAGGGGGCGCCGTCTGGCTGCTTCTGGGCCAACGGCGGGAGCAGC
GGGCGGCGGAGGCACGCGCCGCAGATGTCGCCGGCGGCCGCCGCCGCTGCGGTGGCTTTGACCGGTCACTGAGCGAGTAG
-------------G-------------CTGCTTCCCGTATACTAGTAGTATTTTCCTTTTGTTGCTGTCGCTGTCGATTA
AATCTAGCACGGTAAGTAAAGCTGTAATTCCCC-ATTCTCATTTCTCCGTCCGTCCATCCATCC----------------
ATGCCTGTAAAAAGATTCACGTACCTAGCCACGCTGTAAATCTTCTCCTGCTGCCACTAGCACTGCTACCACTACTTGTT
TATCTAGCACTGTTACGCAAATTGTGTGGGTGTAGCCACGATGCGTCTGTTAAATCCAACCGTCTCTGGTGCCACTGTGG
CAGCACCAGTACTATAC----CCAATAATCTGGCATAG--TACATGTACTG-----------GTATACTGTTAAGTACCG
TGTAGATTTAACAGTGCCATGAATGAGCTTTGTCCTTGCAAATGTATTAAACACAACTCGCGCACCTGCTTCACTCGACT
GTGCCTCCCAACTTTTTACCCCG--CCCACTCCGGCAGCAGATGTAC----TACTGGTACTAGCTAGGA----------G
TAACCGTGCCCATGTTTGG---GCTGCAGAAATAACAGGTCCCCTGTGCGAAGGAGATTCCGGGCAGCGATCACTCTCGC
GCCCCTGTTCGCAGCAGCCATCTCGTTTTCGCGAGAGCTACAGCGAGCTCCTCGTAGTTGCAGGGCCAAAGAATCCGTGA
CCGCGACGCCTCTGATCCAATCCAAGCCACGTTACGTTACACTAGTAGGAGTACATTACACGAGAAGCCTGTGC------
-TCTGAACCAACCACGGTAAGAAAAGAAAA------------------------------GGATTAGAGGAATTGATGCG
AGGTTTGACTTGGGAGCATGGCGTGAGAACCGACTAAACACTCATAGTGCAGCGGAGCGACCGAC---------------
CGTGCGTGGGAGGGCGCACTAGTTGACCTGCAGA-CACTGCAGATCAGCGGGTGTGTGTGTGTATGAGAGGGCATGTATA
GTTTACCTTTTGTTTTAGATTATTCTGTATCGTACTGGTGTGCTCCAGTGTGGCGGA---AGAGGCGGCAAGTCTCGTGG
ATGTCATCTCGAGATCTACAAG--------------------------------
>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS------------------------S------------S-----------------------------
-------S--S-------S----------------------------------S------SS----S-----------SS
S--S--S--S----------SSSSSSS-----S-------S---------------------------------------
----S------------------------S-----------------------------------S--------------
--------S-S-SS-SSSS------------S---S--------SS----------------------------------
--------S-------------------------------------------------------------SSS-SS----
--S----S-------S-------------------S----SSSS-----------------------S------------
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------------------------------------SS-S-------S---------SS---------------------
-----------SSSSSSS----------------------------------------S-------------------S-
--S--SSS-SSSSS-SS-S-S---S-SS-S------------S---S-SSSS-SS-------------------------
--------------------------------------------------------------------S-----------
-------------------------S---SS------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-----SS-SSSSSS------S----------------
---S------------------------------------------------------------------S---------
---------------S---S--------------------------S-------------------------------S-
-------------------------------------------------------------------S--------S-S-
S-S-----------------------S---------------------------------------------------S-
---------------------S---------------S---------------------------------------SS-
-------------------------------S------------------------------------------------
-------------------SSSS---------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
---S----------S-S------S------SS------------------------------------------------
------------------------------------------------------------------S-------------
------------------S-------------------------------------------------------------
------------------------------------------------------------S-------------------
SSS--S----------------------S-----------S------------------------------------S-S
--------------------------------------------------------------------------------
------------------------------------------------------S------------------------S
-----S-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
-S-S--------------S--S-----S-----------------------------------------S----------
--------------------------------------------------------------S-----------------
---------------------------------------------------S----------------------------
------------------------------------------------------------------S-------------
-------------------S--------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------SSSSSSSSSSSSS----S------------------------------------------------
---------------------------------S------------------------S---------------------
------------------------------------------------------------------S------S------
-------------------------------------------------------------------S------------
-------------------------------------------------SSS---------S----------------S-
--------------------------------------S---SS------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
------------------------------S-------------SSS----------------------S----------
-------------------SSSS--S-S-------SSSSSSSSSSSSSSSSSSSSSSSS---------------------
-------------S------------------------------------------------------------------
---------------------------------------------------------------------S----------
---S-------------------------------------------S--------------------------------
S---------------------SSSS--SSSSS---S-SS-----S--------
>forward_546
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----------------------------------------------GAGCAGCAGAGCAGAGAGAG--------------
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>reverse_5560
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---------------------------------------CTATCACCTTGGGCGTCTCC---------------------
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>forward_5574
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----------------------------------AGATGCTATCACCTTGGGCG--------------------------
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>reverse_6748
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---------------------------CTCGTGAGAGCTACAGCGAG---------------------------------
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------------------------------------------------------
