>input_sequence_40592
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-------------------------------------------------------------------------------A
TGGCGCAGGGGACGCTGGAGGTGCTGCTCGTCGGAGCCAAGGGACTCGAGAACACCGACTACCTCTGTAAGCTACCTTCG
GCCTCTCCCTCCCCACATCGAGTTCTGTTCTGCTTGAATTCGGCTCTGCTTTCCCGTTCCCCGCTCGATCAAGTAGCTCG
GTGAAGTGATGGCCTCCCGATCAGCCAGATCGGCGCAATATTCTCGAGTTGTTTGTGCTTTCGCC-TTTGCTGGTGTCTA
ATTGGCGGGATCGATTCTCGCTGACGAGTTCCGTGGCTGCGAATTGTTTGCTGCAGGCAACATGGACCCGTACGCGGTTC
TAAAATGCACATCGCAGGAGCAGAAGAGCACCGTCGCCTCAGGTAAATTTCTTCGTTAGCTTGCAAATATTTTGCTC---
---ACAGTATATAGGAAACCTTA--TATATCTCTTCAATTTATCGATCAACGCTTTCGTTCACTAGTAGCGTTCAAAACG
ATATC---TTAATGATAGTGAAATCTGGTCCTTGTGGTCCTTCAC--AAAGAAAAAAACGAGCACTGGTACTGAATGAGT
CCTAGGTTCCACGTGCTGCTAGAAAGCTACCAGGCTTGAAGCTTGAGTCTGTCATGTGTTTTGCCATGTCAGTAATGTCT
GGACACTTGAACAGCAGGAAAATCTAGACGATCATAATAAGAACGCAGATCGATTCAGAATGGCAGCAACCAATGCGCTA
AAAGCACGTTAATTAAGTAGTTAACGCATCTTATTTTCCCACCTCGTTTGCGATAAGCCGAATCAACCGTGGATCCTTCC
ATGAGG--AAAATTGGAAATCATCAAGACATGTTAAAAGCAGCAGCATGCATCTAAATGCTGCTGTGCATGTGTGCTATT
GACTTCTTTATGAGA-------------------------------TGTAACTTGACTTCACTCGATGCATGCAGGAAAG
GGAAGTGATCCTGAATGGAACGAAACCTTTGTGTTCACCGTCTCTGAGAATGCAACCGAGCTCGTCATCAAGCTCCTCGA
CAGTGATGGTGGCACGGACGACGACAGCGTTGGTGAAGCAACGTAAGTCGAAATGAGCTAGGAGTAGCAATTTTGGTCCT
GTGTCAGTTTCTATCCCTGAAGATGTGGCCAACCCAG------------------------------AGTGTTCCTTTGA
GTTAGTTGTGGGGCTGGCGGTCTTACATAAAACTGGCTCAAATGTTTGGCGAAATCTGTTTTTGAAACACTTGCAGTTTG
CATTTCGATTGATGTCGCAGCATCGCGGGATGCAAAATTGAATGATCGCAGATTGCATCATCCACTACAACTCTGAGTAT
TTGATTCTTTCAGGATCCCATTGGATGGAGTGTACACTGAAGGAAGCATCCCACCAACTGTTTACAATGTTGTCAAAGAC
GAAGAGTACCGTGGAGAAATCAAAATCGGTCTGACGTTCACTCCGGAGGTAGCTGTCTTACATTCATGTTCAGGGACTAA
ACCCATTTCACTTTACCGTGTCCTCTGTTTCTCTGTGGCTAACTAAACGTCTGCATTAGTAACTGTATATGCAAGCTTGT
AGGGCCTTATTCGCTGTTAACAGTTTTCACATATGATAAACTGATCACCACCACACACTTGGCTGTAATTCTTCAACTCC
CTCCACAGATACATTCCGTTTGAGCGACAAGTAACATGGATCGGAGGAAGTACCATCTTTTAGCCTTTCAACTTCTAGTT
TCAGCACCACTAATTGTGTAGAGTATCCGGGTCTTATTTTTATGCTCCTTTGATGCCTTCCTTTTCTTTTCTTTTTTTGA
CACGTCAACTGCGGGCTTACACAAGCCTGAAATGCTTTCCATTTTTATGAAGATGAACGAGCTGGTCCTTCTTCTGACCT
CAATACTTACATTTCTGCTAAATGCTTTTCTCTGTTCACAGGAGGCTCGTGATGAGGATCAACCCGAGGAAAACTACGGT
GGGTGGAACCAATCATCTTGA-----------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------
>chr2A_1_TraesCS2A01G372000
TGAACTATTTTTGAATTTTTGGACATTCGTTTTATAAATGGAACAGTTTTTTTATTTTTCAAACATTTTTTGAGGAACAC
ATTTTTTTTAAATGCGAACAAATTGTGAAATCTCAATTATTCTTTGAAATGATTGAATATTTTTGTAT-TAGTAAGCATT
TTTGTGAAAACACGC-ACAAAATTTGAAAACATAATCATTTTAGAAAATTCCAAACTTTT-TTTGGAAATGCAAATAATT
AGGAAATCTTGAACATTTTCTGGATATTTCTTGAAATTTGTGAATTATAGAAACAAAAAAGAGAAGAAAAAA--------
-----ATAAACCGGCAAACCAGTAAGAAAACGAATCGGGAACCTTCGACAAGGTTCGAAAAAACTCTTAGGAACCTTGTA
AAATCGGTCCTGGCAGTTTTCTCGCTCAATTTATAATGGGCCGGCCCGTCCACGGTCCCTAGTGAGGAAACGCTACGCTA
GGGATTGCAACGGGCGATATATAGCGTTCGTGGCCTCTAAAAAAATGCAGTTGTGGCCCCGGACGGCCACCGTCCATGGA
CGATGCAACTAC----TACACTGCACCTGCACGATCACACGAACGGTGACAGACTGGGCGCGTCAAACCCGTCCTCTCGC
TCCTCAATCATCCAATCGGCACGGCCGGACTACGGGCAGACACGCGCGAAACCGGCGGAAGAACCCACCGCCCCCACCCC
ACCCCCCATTGGCGCGCCGCGCGGTACTTGACCTGCCTTCGGCAAGTTGGCAAGTCGCCTATGCCCTACCACACACCGCG
TCCATGTGACGCGACGTGGGGGAGGT-------------------GCGAGGAAGACGCGGCCGAGCCTTCCATTTTTCAA
CTCCTAGTCCTATACATACAGCGGCGCCCCGGGGCTCGGATCGGATCTACAGCAATCAGTCTCGACCTTCAGTCGTGCTG
CCTACCCATCAGCATATAATTCCTGATCGAGCGAGCGGGAGAGGAAGGCGAGATCAGTCAGATCAGGCCCGGAGAGAAGA
TGGCGCAGGGGACGCTGGAGGTGCTGCTCGTCGGAGCCAAGGGACTCGAGAACACCGACTACCTCTGTAAGCTACCTTCG
GCCTCTCCCTCCCCACATCGAGTTCTGTTCTGCTTGAATTCGGCTCTGCTTTCCCGTTCCCCGCTCGATCAAGTAGCTCG
GTGAAGTGATGGCCTCCCGATCAGCCAGATCGGCGCAATATTCTCGAGTTGTTTGTGCTTTCGCC-TTTGCTGGTGTCTA
ATTGGCGGGATCGATTCTCGCTGACGAGTTCCGTGGCTGCGAATTGTTTGCTGCAGGCAACATGGACCCGTACGCGGTTC
TAAAATGCACATCGCAGGAGCAGAAGAGCACCGTCGCCTCAGGTAAATTTCTTCGTTAGCTTGCAAATATTTTGCTC---
---ACAGTATATAGGAAACCTTA--TATATCTCTTCAATTTATCGATCAACGCTTTCGTTCACTAGTAGCGTTCAAAACG
ATATC---TTAATGATAGTGAAATCTGGTCCTTGTGGTCCTTCAC--AAAGAAAAAAACGAGCACTGGTACTGAATGAGT
CCTAGGTTCCACGTGCTGCTAGAAAGCTACCAGGCTTGAAGCTTGAGTCTGTCATGTGTTTTGCCATGTCAGTAATGTCT
GGACACTTGAACAGCAGGAAAATCTAGACGATCATAATAAGAACGCAGATCGATTCAGAATGGCAGCAACCAATGCGCTA
AAAGCACGTTAATTAAGTAGTTAACGCATCTTATTTTCCCACCTCGTTTGCGATAAGCCGAATCAACCGTGGATCCTTCC
ATGAGG--AAAATTGGAAATCATCAAGACATGTTAAAAGCAGCAGCATGCATCTAAATGCTGCTGTGCATGTGTGCTATT
GACTTCTTTATGAGA-------------------------------TGTAACTTGACTTCACTCGATGCATGCAGGAAAG
GGAAGTGATCCTGAATGGAACGAAACCTTTGTGTTCACCGTCTCTGAGAATGCAACCGAGCTCGTCATCAAGCTCCTCGA
CAGTGATGGTGGCACGGACGACGACAGCGTTGGTGAAGCAACGTAAGTCGAAATGAGCTAGGAGTAGCAATTTTGGTCCT
GTGTCAGTTTCTATCCCTGAAGATGTGGCCAACCCAG------------------------------AGTGTTCCTTTGA
GTTAGTTGTGGGGCTGGCGGTCTTACATAAAACTGGCTCAAATGTTTGGCGAAATCTGTTTTTGAAACACTTGCAGTTTG
CATTTCGATTGATGTCGCAGCATCGCGGGATGCAAAATTGAATGATCGCAGATTGCATCATCCACTACAACTCTGAGTAT
TTGATTCTTTCAGGATCCCATTGGATGGAGTGTACACTGAAGGAAGCATCCCACCAACTGTTTACAATGTTGTCAAAGAC
GAAGAGTACCGTGGAGAAATCAAAATCGGTCTGACGTTCACTCCGGAGGTAGCTGTCTTACATTCATGTTCAGGGACTAA
ACCCATTTCACTTTACCGTGTCCTCTGTTTCTCTGTGGCTAACTAAACGTCTGCATTAGTAACTGTATATGCAAGCTTGT
AGGGCCTTATTCGCTGTTAACAGTTTTCACATATGATAAACTGATCACCACCACACACTTGGCTGTAATTCTTCAACTCC
CTCCACAGATACATTCCGTTTGAGCGACAAGTAACATGGATCGGAGGAAGTACCATCTTTTAGCCTTTCAACTTCTAGTT
TCAGCACCACTAATTGTGTAGAGTATCCGGGTCTTATTTTTATGCTCCTTTGATGCCTTCCTTTTCTTTTCTTTTTTTGA
CACGTCAACTGCGGGCTTACACAAGCCTGAAATGCTTTCCATTTTTATGAAGATGAACGAGCTGGTCCTTCTTCTGACCT
CAATACTTACATTTCTGCTAAATGCTTTTCTCTGTTCACAGGAGGCTCGTGATGAGGATCAACCCGAGGAAAACTACGGT
GGGTGGAACCAATCATCTTGAGAAGAAGTAGGTGCTTTGCTGAACTGTGGTGCGTGACAAGTCGTGTGCTAGAACTAAAG
CCTATTTTAATTGTTAAAGACTGTATTTATCATTGATTCCATCAATTATGGATAAGCTACAAATCTCCTTATTGATTGGT
ATCGTTTTCTAGTATTCAAATTTGTAATAACAGTGTTCCCCACTTGTATGAAGTATGAGCCCTCTTTAATGTCACTAAAT
TGATTTGCAATGGTGATGGCCCCATTTCTTAATAGA--------------------------------------------
-------------------------------------------------------------------GAAGGTTGTGTGC
ATCAATTGATGCAAAGGCCAAAGGCACTCGCTTGT-TTTCTTCCTTTTTGG-AAAGAGTACATTTTCTCCTTTCTTTTGT
CGATGGTGCTTCC---TTTGTTGTAGATATTCAATCTAGCCTACATGTGAGGATGAAATCCTCTTATAACAACCC-TGTT
GTCCATGGTGACCTACCAATTTTCTATCTTTTGAATGTCGAAGTGGGAACTAAAAAGAATAGACAAGATATGGTGACACT
TCCACCGGGGGAAAGAGTTAGGGGTACCCTAACATTCTTGAATTTTACAAGTTTAATCATGCTTTTCGCCTCTAGTGGTC
GTGGTTTCACTGACCAAGCTTCAACCTAGTAGAGCTTCAATAGTGGTACTAACGGTTTAAAACTGGTGCTACTATGAAAA
TGACCTCAGTGACAGGATTTAGAGAACCTAGTAGTTTGGGGTTGATGTAGTTGTTGTGCTTCGGAAGTTGGAACTACCGG
GTTCTCATGTTGTTGCCTCTGGGAAGCCTTTCTCTTCTTAGCTGCTAAGTCCATCGCTCTGTCAACACTG-CAGGTTTTG
GTTTGGTATTGCCGAGTTTGTATTCTGGATCTGGGTTTGTTGACTGCTTCCTTTGTCGGGTTTTGTGTACAGTAGCTCCA
TGAAAAAGTTTTGTTGTGCGGCATGAATCACACTTCAAACCTCGATAGTATCGAT--TTTGTGCCGTTGGTTTTAATCTC
AATTGGATTCTATTTGAGAAA
>chr2D_1
TGAACTATTTCTGAATTTTTGGACATTTATTTTTAAATGGGAACAATTTTTTAATTTTCATTTT---TTTTGAGGAACAG
TAATTTTTTAATTGCAAACAAAATGTGAAATTATAATCATTTTTTG-------------------TAT-TTTTAAGCATT
TTTTTGGAAAACATGAACAAAATTTGAAAACATAATCATTTTTGAAAATTCCAAACATTT-TTTGGAAAAGAAAATAATT
AGGAAATTTTGAACAA-TTTTGGATATTTCTTGAAAATTTTGAATTAAAGAAG---------------AAAA--------
-----AAAAACCGGCAAACCAGTAAGAAAACAAATCGGGAA----------GGTTCCAGAAACCGCTTAGGAACCTTGTA
AAACCGGCCCTGGCAGTTTTCTCGCTCGATTTATAATGGGCCGGCCGGTCCACGGTCCCTAGTGAGGAAACGCTACGCTA
GGGATTGCAACGGGCGATATATAGCGTTCGTGGCCTCTAAAAAAATGCAGTTGTGGCCCCGGACGGCCACCGTCCATGGA
TGATGCA---AC----TACACTGCACCTGCACGATCACACGAACGGTGACAGACTGGGCGCGTGAAGCCCGTCCTCTCGC
TCCCTAATCATCCAATCGGCACGGCCGGCCTACGGGCAGACACGCGCGAAACCGGCGGAAGAAGCCACCGCCCCCTCCCA
CA-----ATTGGCGCGCGGCGCAGTACTTGACCTGCCTTATACAAGTTGGCAAGCTGCCTATGCCCTACCACACACCGGG
TCCAT-------------------GTGATGCGACGTGGGGGAGGCGCGAGGAAGACGCGGCCGAGCCTTCCATTTTTCAA
CTCCTAGTCCTATACATACAGCGGCGCCCCGGGGCTCGGATCGGATCTACAGCGATTAGTCTCGACCTTCAGTCGTGCTG
CCTGCTCATCAGCATATAATTCCTGATCGAGCGAGCGGGAGAGGAAGGCGAGATCAG---------GCCGGGAGAGAAGA
TGGCGCAGGGGACGCTGGAGGTGCTGCTCGTCGGAGCCAAGGCCCTCGAGAACACCGACTACCTCTGTAAGCTACCTTCG
GCCTCTGACTCCCCCCATCGAGTTCT----------------GCTCTGCTTTCCCGTCCCCCGCTCGA---AGTAGCTCG
GTGA-----TGGCCTGTCGATCAGCCAGATCGGCGCAATATTCTCGAGTCGCTTGTGGTTTCGCTTTCTGCTGGTCTCTA
ATGGATGGGATCGATTCTCGCTGACGAGTTCCGTGGCTGCGAATTGTTTTCTGCAGGCAACATGGACCCGTACGCGGTTC
TAAAATGCACCTCGCAGGAGCAGAAGAGCACCGTCGCCTCAGGTAAATCTCTTCGTTAGCTTACAAATTTCTTGTTGATA
CATACAGTACATAGGAAACCTTATATATACCTCTTCAATTTATCGATCAACGCTTTCCTTCACTAGTAGTGTTCTAAACG
ACATC---TTAACGATAGTGAAATCTGGTCCTTGTGGTCCTTCAC--AAAGAAAAAAACGAGCACTGGTGCTGAATGAGC
CCTAGCTTCCACGTGCTGCTAGAA-GCTATCAGGCTTGACGCTTGAGTCTGTCATGCGTTTTGCCATGTCAGTAATGTCT
GGACACTTGAACAGCAGGAAAATCTAGACGATCATAATAAGAACGCAGATCGATTTAGAATGGCAGCAACCAATGCGCTA
AAAGCACGTTAA----GTAGTTAACCCATCTTATTTTCCCACCCCGTTTGCGATAGGCCGAATCAACCGTGGC-CCTTCC
ATGAGG--AAAAGTGGAATTCATCAAGACATGTTAAAAGCAGCATCATGCATCTCAATGCTGCTGTGCATGTGTGCTATT
GACTTCCTTATGAGATGTAACTTGACTTAAATTTTTTTTTGCGGGGTGTAACTTGACTTCACTCGATGCATGCAGGAAAG
GGAAGTGATCCTGAGTGGAACGAAACCTTTGTGTTCACCGTCTCTGAGAATGCAACCGAGCTCGTCATCAAGCTTCTGGA
CAGTGATGGTGGCACGGACGACGACAGCGTTGGTGAAGCAACGTAAGTCGAAATGAGCTAGGAGTAGCAATTTTGGTCTT
GTGTCA------------------------------G------------------------------AGTGTTCCTTTGA
GTTAGTTGTGGGGCTGGCGGTCTTACATAAAACTGGCTCAAATGTTTGGTGAAATCTGTTTCTGAAACACTTGCAGTTTG
CATTTCGATTGATGTCGCTGCATCGCGGGATGCAAAACTGAATGATCGCAGATTGCATCATCCACTACAG--CTGAGTAT
TTGATTCTTGCAGGATCCCATTGGATGGAGTGTACACTGAAGGAAGCATCCCACCAACTGTTTACAATGTTGTCAAAGAC
GAAGAGTACCGTGGAGAAATCAAAATCGGTCTGACGTTCACTCCGGAGGTAGCTGTCTCACATTCATGTTCAGGGACTAA
ACCCGTTTCACTTTACCGTGTCCTCTGTTTCTCTGTGACTAACTAAATGTCTGCATTAGTAACTGTATATGCAAGCTTGT
AGGGCCTTATTCGCTGTTAA-------CACATATGATAAACTGATCACCACCACACAGTTAGCTGTAATTCTTCTACTCC
CTCCATAGATACA-TCCGTTTGAGCGACAAGTAATATGGATCGGAGGAAGTACCATCTTTTAGCCCTTCAACTTCTATTC
AACTTCTAGT---TTGTGTAGACTCACCCAGTCTTC-TTTTATGCTCCTTCAATGTTTTCCTT--------TTTTTTTGA
CATGTCAACGGTGGGCTTACACCGGCCTGAAATGCTTTCCATTTTTATGAAGATGAACAAGCTGGTC---CTTCTGATCT
CAATACTTACATTTCCGCGAAATGTTTTTCTCTGTTCACAGGAGGCTCGTGATCAGGATCAACCCGAGGAAAACTACGGT
GGGTGGAACCAATCATCTTAAGAAGAAGCAGGTGCTTTGCTGAACTATGGTGCGTGACAAGTCGTGTGCTAGAACTAAAG
CTTATTTTAATTGTTAAAGACTGTATTTGTCGTTGATTCCGTCAATTATGTATAAGCTACAAATCTCCTTATTGATTGGT
ATCATTTTCTAATCTTCAAATTTGTAATAATAGTGTTCCCCACTTGTATGAAGTATGAGCCCTTTTTAATGTCACTAAAC
TGAGTTGCAATAGCGATGGCCCCATTTCTTATGTAATACTC-ACTCAATCCCAAAATAAGTGTCTCAACATTAGTACAAC
TT-----------TGTACTAAAGTTGAGGCTCTTATTTCTGAACCGAGGGAGTACTAGAGAACTGGTGATGGTTGTGTGC
ATCAGTTGATACAAAGGCCGGGGGCACTCCCTCGT-TTTCTACCTTTTTGG-AAAAAGTGTATCTTATCTGTTACCTCGT
CGATGGTCCTTCCTTTTTTGTCGTAGATATTCAATCTGTCCAGCAGGTGAGGACGAAACCCTCTTATAACAACCC-TATC
GTCCATGGTGACCTACCAATTTTTGGTCTTTCGAATGTCTAAGTGGGAACTAAAAAGAATTGACAAGATATGGCGACACT
TCCACTGGGCGAAAGAGTTAGGGGGGCTCTGACATCCTTGATTTTCACAATTTTGATCACGCTTTTCGTCTCTAGTGGCA
GTGGTTTTATTGAGCGAGCTTCAACCTAGTAGAGCTTCAATAGTGGTACTAACGGCTTAAAGCTGGTACTATTGTGAGAA
TGACCTCTATGTTGGGAGGTAGGGAACCTAGTAGTTTGGGGTTGCCC---TTGTTGCGCTTTGAAAGTCGGAACTGTCGG
GTTCTCATGTCAGTGCCTCCGAGAAGCCTTTCTCTTCTTAGTTGCTCAGTCTAGCGCTTCGTCGACACTACCAAGTTTTG
GTTTGGTATTGCCGACTTTGCATTCTGGATCTGGGTTTGTTGACTGCTTGCTTTTTCTGTTTTTGTGTGTGGTAGCTCCA
CGAAAATGTTTTGTTGTGCGGCGTGAATTAGACTTGAAACACTCAAAAGTACT-GAGTTTGTGCCGTTGGTTTGAATCTC
AGTAGGATTTTATTTGAGCAA
>chr2B_62
AA--------------------------------------------------------CATTTG---TTTTGAGGAACAC
TAAATTTTTAAATGCAAA-AAAATGTGAAATTGCAATCATTTTTTGAAATGATTGGTTTTTTTTTTGTATTTTAAGCATT
TTTTTGGAAATCATAAACAGAATTTGAAAACGTAATCATTTTTGAAAATTCCAAACATTTTTTTGGAAAAGAAAATAATT
AGGATTTTTTGAT--TTTTTTGGATATTTCTTGAAATTTGTGAATTAAAGAAG---------------AAAAAATGAAGA
AAAAAATAAACCGGCAAACCAGTAAGAAAACGAATCGGGAACCTTCTAGAAGATTCCAAAAACCGCCTAGGAACCTTGTA
AAACCGGTCCTGGCAGTTCGCTCGCTCGATTTATAATTGGCTGGCCCGTCCACGGTCCCTAGT---GAAACGCTACGCTA
GGGATTGCAGCGGGCGATATGTAGCATTCGGGGCCTCTAAAAAAA-GCATTTGTGGCCCCGACGTGCCACCGTCCATGGA
TGATGCA---ACGGAGTACACTGCACCTGCACGATCACACGAACGGTGACAGACTGGGCGCGTCGAGCCCGCCCTGTCGT
TCCCCAATCATCCAATCGGCACGGCCGGGTTACGGGCAGACACGCGCGAAACCGGCGAAAGAAGCCACCGCCCCCTCCCA
CA-----ATTGGCGCGCGGCGCAGTACTTGACCTGCCTTAGACAAGTTGGCAAGTTGTCTATGCCCTACCACACACCGCG
TCCAT-------------------GT-------------------GCGAGGAAGACGCGGCCGAGCTTTCCATTTTTCAA
CTCCTAGTCCTATACATACAGCGGAACCCCGGGGCTCGGATCGGATCTACAGCAATTAGTCTCGACCTTCAGTCGTGCCG
CCTGCTCATCAGCATATAATTCCTGATCGAGCGAGCGGGAGAGGAAGGCGAGATCAG---------GCCGGGAGAGAAGA
TGGCGCAGGGGACGCTGGAGGTGCTGCTCGTGGGAGCCAAGGGCCTCGAGAACACCGACTACCTCTGTAAGCTACCTTGG
GCCTCTCCCTTCCCCCATCGAATTCTGATCTGCTTGAATTCGGCTCTGCGTTTCCGTCCCCTGCTCGATCAAGTAGCTCG
GTGA-----TGGCCTCTCGATCAGCCAGATCGGCGCAATATTCTCGAGTCCTTTATGCTTTCAGTTTTTGCTGGTCTCTA
ATGGATGGGATCGATTCTCGCTGACGAGTTCCGTGGCTGCGAATTGTTTTCTGCAGGCAACATGGACCCGTACGCGGTTC
TAAAATGCACCTCGCAGGAGCAAAAGAGCACCGTCGCCTCTGGTAAATCTCTTCGTTACCCTACACATATTTTGTTGATA
TAGGTAAACCT--------------TATACCTCTTCAATTTATGGATCAACGCTTTTGATAATTAGTAGTGTTCAAAACG
ATATATTATTATTGATAGCGAAATCTGGCCCTTGTGGTCATTTTTTAAAGGAAAAAAACGAGCACTGGTGCTGAATGAGT
GTCTGTCA--------------------------------------------------TTTTGCCATGTCAGTAATGTCT
GGACACTTGAACAGCAGGAAAATCTAGATGATCATAGTAAGAACGCAGATCGATTCAGAATGGCAGCAACCAATGCGCTA
AAAGCACGTTAA----GTAGTTAAGACCTCTTATTTTCCCACCTCGTTTGTGATAAACCGAATCAACCATGGATCCTTCC
ATGAAAAAAAAAATGAAATTCATCAAGAC--GTAAAGAGTAACGTCATGCATCTCAATGCTACTGTTCATGTGTGCTATT
GACTTCCTTATGAGATGTAACTTGAA-------------------------------TTCACTCGGTGCGTGCAGGAAAG
GGAAGTGATCCTGAGTGGAACGAAACCTTTGTGTTCACCGTCTCTGAGAATGCAACTGAGCTTGTCATCAAGCTACTGGA
CAGTGATGGTGGCACGGACGACGACAGCGTTGGTGAAGCAACGTAAGTCGAAATGAGCTAGGAGTAGCAATTTTGGTCTT
GTGTCA------------------------------GTTTCTATCCGTGAAGATGTGGTCAACCCAGAGTGTTCCTTTGA
GTTAGTTGTGGGGCTGGCGGTCTTACATAAGACTGGCTCAAATGTTTGGCGAAATCTGTTTTTGAAACACTTACAGTTTG
CAATTCGATTGATGTCGTAGCATCACGGGATGCAAAATTGAATGATCGCAGATTGCATCATCCACTACAA--CTGAGTAG
TTGATTCTTGCAGGATCCCATTGGATGGAGTGTACACTGAAGGAAGCATCCCACCAACTGTTTACAATGTTGTCAAAGAC
GAAGAGTACCGTGGAGAAATCAAAATTGGTCTGACGTTCACTCCGGAGGTAGCTGTCTCACATTCATGTTCAGGGACTAA
ACCTGTTTCACTTTACCGTGTCCTCTGTTTCTCTGTGGCTACCTAAACGTCTGCATTAGTAACTGTATATGCAAGCTTGT
AGGGCCTTATTCGCTGTTAA-------CACATATGATAAACTGATCACCGCTACACAGTTAGATGTAATTCTTCTACTCC
CTCCATAGATGCA-CCCGTTTGAGCGACAATTAACATGGATCGGAGGAAGTACCATCTTTTAGCCTTTTAACTTCTAGTT
T-------------TGTCTAGAGTAACCCGGTCTTC-TTTTATGCTCCTTCTATGTTTTCCTT--------TTTTTTTGA
CGTGTCAACGGTGGGCTTACACCGGCCTGAAATGCTTTCCATTTTTATGAAGATGAACGAGCTGGTCCTTCTTCTGATCT
CAATACTTACATTTCCGCGAAATGTTTTTCTCTGTTCACAGGAGGCTCGTGATCAGGATCAACCCGAGGAAAACTATGGT
GGGTGGAACCAATCATCTTGAGAAGAAGCAGGTGCTTTGCTGAACTATGGTGCGTGACAAGTCGTGTGCTAGAACTAAAG
CCTATTTTAATTGTTAAAGACTGTATTTGTCGTTGATTCCCTCAATTATGGATAAGCTACGAATCTACTTATTGATTGGT
ATCGTTTTCTAATATTCAAATTTGTAATAACAGTGTTCCCCACTTGTATGAAGTATGAGCC-TCTTTAATGTCACTAAAC
TGAGTTGCAATAGCGATGGCCCCATTTCTTATGTAATACTCCACTCCGTCCCAAAATAAGTGTCTCAACATTAATACAAC
TTTATACTAAAGTTGTACTGAAGTTGAGGCACTTATCTTGGGACCGAGGGAGTACTAGAGAACTGGTGATGGTTGTATGC
ATCAATTGTTACGAAGGTCATGGGCACTCCCTCGTCTTTCTTCCTTTCTGGAAAAAAGTGTATCTTCTGTGTTCTCTCAT
CGATGGTGCTTCTTTTTTTGTCGTAGATATTCAATCTGGT-AGCAGATGAGGATGAAACCCTCTTATAACAAACCCTATC
GTCCATGGTGGCCTACCAGTTTTTGGTCATTCGAATTCCTAAGTGGGAACTAAAAAGAATTGACAAGATATGGCGACACT
TTCTCCGAGCAAAAGAGTTATGGTGACTTTGACATCCTTGATTTTGACAAGTTTGATCATGCTTTTCGTCTCTGGTGGTA
GTGGTTTTACTGAGCGAGCTTCAACCTAGTAGAGCTTCAATAGTGGTACTAATGGTTTAAAGCTGGTACTACTGTGAGGA
TGACCTCTATGTTGGGAGGTAGATAACCT----GTTTGGGGTTGCCCTGGTTGTTGTGCTTGGAAAGTCGGAACTATCGG
GTTCTCATGTCGGG----------AGCCTTTCTCGTCTTAGTTGCTAAGTCCAGCGCTCCGTCGACACTGTTAAGTTTTG
GTTTGCTATCGCCAACTTTTTATTCTAGATCTAGGTTTGTTGTCTGCTTGCTTTTTCAGTTTTTGTGTACGGTAGCTCCA
TGAAAGTGTTTTGTTGTGCGACGTGAATCACACTTGAAATAGTCAAAAAGTGTCGAGTTTGTGCCATTGGTTTGAATCTC
AGTAGGATTCTATTTGAG---
>SNPs
----------S----------------SS----SS--SS------S------S-----SSSSSSSSS-------------
SSS------------S------S--------SS----S---S-------------SS-S-----S-----SS--------
---S--S---SSSSS---------------------------S-------------S------------S-S--------
-------S-----------S---------------------------S----SSSSSSSSSSSSSSSS------------
----------------------------------------------S-S-------S-----S-S---------------
---S-----------------------S----------------------------------------------------
--------------------------------------------------------------------------------
S------SSS--------------------------------------------------------S-------------
---S------------------------S----------------------------------S-----------S---S
SSSSSSS----------S----S----------------S-S-------------S------------------------
-----SSSSSSSSSSSSSSSSSSS--------------------------------------------------------
--------------------------------------------------------S-----------------------
---S-S---------------------------------------------------SSSSSSSSS---S----------
-------------------------------------------S------------------------------------
--------------S------------S-----------------------------S----------------------
----SSSSS-------S--------------------------------S--------------S----------S----
--S-SS-------------------------------------------S------------------------------
----------S-------------------------------------S-------------S-----------S-S---
---------S-------------------S---------------------------------------S----------
---------------------------------------------------------------------S----------
-----S------------------S----S---------S----------------S-----------------------
--------------------------------------------------------------------------------
------------SSSS---------S------------------------------------------------------
------------S-----S-------------------------S---------S-------------------------
------S-------------------------------------------------------------------------
--------------S-----------------------------------------------------------S--S--
------------------------------------------------------------------------------S-
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------SS--------
---------S----------------------------------------------------------------------
----------------------------------------------------------S---------------------
----S---------------------------------------------------------------------------
--------------------SSSSSSS------------------------------S--S-------------S-----
-----S-------S------------------------------------------------------------------
-SSSSSSSSSSSS------------S--S------SS-------------SS---SS------SSSSSSSS---------
--S------S-S----------SS-----------------------------------------------------S--
---------------S--S-----S----------------------------S--------------------------
----------------------------S-----------------S---------------------------------
----------------------------S--S--------S---------------------------------------
-----------S-------------------------------------------------------------------S
---S-------S-S-----------------SSSS---------------------------------------------
---------------------------------------------------------------------S----------
----------S---------SS-------S--S----------------------S---SS--S-----SS----S-S--
---------------------S---------------S---SS--S------------S------------------S-S
-----------------------SSS-----S-------S--------------------S------------S------
---------S--------------S--S--S----S-----S---S--------S-------------S----------S
-------S-----S-S---------------------------------------------S-----S-----S---S--
-------SS--SSS---SS-------------------------SSS-S------------S-S----S-------S---
----------S-S------S-S-------------------S-----------S-----S---S---------S------
---------------S---------------------------------S----S--S-S----------S---------
------S---------------S------------S----SSSS-S-SSS--SSS------------------S------
-S-S--------------S--
>forward_776
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------CTTCGGCAAGTTGGCAAGTC------------------------
--------------------------------------------------------------------------------
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---------------------
>reverse_2174
--------------------------------------------------------------------------------
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-------------TCCCTGAAGATGTGGCCAAC-----------------------------------------------
--------------------------------------------------------------------------------
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>forward_2078
--------------------------------------------------------------------------------
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----------------------------------------------------------AGCTCGTCATCAAGCTCCTC--
--------------------------------------------------------------------------------
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---------------------
>reverse_3917
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------CCGG
GTTCTCATGTTGTTGC----------------------------------------------------------------
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---------------------
