>input_sequence_40561
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-------------------------------------------------ATGGGGCTCAAGGGGAACAAGCGCTTCGGCG
GCCGCGGCGGCGG------CGGCCAGCCGCCGGCCAAGCGCCAGGCGGCCGGGAAGGACGGCCCCGCCGAGGAAACCGAC
GACGGCATCGTCGTCGCGCAGGTGTTGTTTCCGTACTCCCGACCAACCTACCGCTCCCTCTCAAAAGGCAGATCCCTAAA
ACCCTCGACCCGTGGATTTATTTATTTTTTCATTCTTCC-CTTCAGATATCGAAGAACAAGAGGGTGGCTGTGAGGAGCT
GGAACGGCAAGGTGATGGTCGACATGCGCGAGTTCTACGAAAAGGACGGCAAGAGCCTCCCGACCCGCAAAGGTATCCTG
GCATTTCTTTCTTGTTCCGTAGTAGCATGTTCGA----------------------------------------------
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--------------------------------------------------------GTTCGAAACCTGAATGTTTGCCTG
TGCACTTGCGTATTGTATTATTACCCTGCCGTAATCCATGTGGATCTGAAATATGT-TATTATCTGAATGTCAGAAC-AT
TGCATTTCTTTTGCCTACGTGGAAGGTGGGCATATGTTAAATCTTGGGGACACCTGATGCATCTAGTGGTCAACTACAT-
ACATGTGGCCCGTAATTGCTTTTTGTATTGTCCGTGCTTGGTAATGGCACTCTGTTAAGTGTAAAGCACTCTATTAAGTG
AATGCTTTATGAATGAGCCAGGAGGAAGTGCAATAACAAATTCTTCCCTTTAGCAATTAGTTTGGT--TACACCAATGAA
GGGTCTTCAGCCTTGATATGACTTCCCCACCCACTAACATT-ATAATGGATGGATGTCCATATCTTGAAACAGGCATACA
AAAATGAGCATCCTTGTGT----TTAGCACACTATGTTGTAAGCTCAAGCAGGTGATGAACATGACATTCTGCAAAATAC
TTATTGTAGCTGTAGGTAGAGACTACCCCCATTTAATCCGCGTCTTACGTCTTGACGTTAATCCTT-GACTACCTTTTGT
CTATGCACTTCTTGGATCAGTTGAAAATGCAATATTTGGTCAAATGATGAAGCAGGGGT---TCATACTTCTGATCACAG
ATATTTCATTACCCTAGTTGATAGATATAAATGAGTTAAG------TTCTTAGATTTTGTGAGAGTATAATAAAC-GTCT
GAATGTGTACCTATGCCACTGACTTCATTTTTAAACCCAGAATACCGTTCTATGTTCTACTCATTCAGTATCATTGAATA
CCAGTTGCCAGAAATGAT--------------------------------------------------------------
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-----------------------------------------------------TATCTTAAGTGTGGGTGCATTCTATTG
GAATCTGGACGTACACATGCTGGCATTTTTTTTTTTTTGCTTATTTCCCTCAAGCTCAAGTACTAT-CTGTAATGTTTTC
AGTTTAAAAGAATGTACTATCTGTTATAATTGTTCAAGATGATGCTATAGCTTTTCGGCTTATTATTTCATTTTCCTTTT
TTCAGGTATATCGCTTTCAATGGATCAGGTAAGATGCATTTCAAGATCTATTTGTATCCTATACGCATAAAGCAAATCTG
TTACCCTGAGAAGATAGATCATGATCTGTCTGAAATGTGAATGATACATTAGAATATCTAGTAGGCGGCGTGAAAATTTC
TTGGCAAGCTTTGACATCCTTTTTTTAGCATGAAG---------ACACGTCAGAGGATACTCCTACCTTAAAGCCGAATA
ATTTTAGTTTCAGTGCCCATCTCTCATGCTGTCTGTTACAGGAACATGATCACAAGTACCTTAAT--ATGTTAAATTTGC
GTGCACGTAACGTCAAGTTCGGGCCTATTGCCACATACGTACATGCCATGATTGTCTTTGTTGGCTGTGATCGACTTGC-
---TGTATAGGTGGTACTCTGGTAGCAACCAACTATTGTGTGATCTTTTACTTGGGTTTGCAGCAACAAACCATCACTTC
CTTCCTATAACAGCTCACTAGTTTTTTACATGTGCAGTGGAAGATACTGAGGGACAACATCGAAGCTATAGACGAGGCCA
TCAAGGAGAACACTTGA---------------------------------------------------------------
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--------------------------------------------------------------
>chr5A_1_TraesCS5A01G299800
TTCCTGACTATCTACTACAACAAATTATGCGCGGCTCCGACAAGAGAGGGACGCTGATGTCGACACGCCTTCTGCTCGCT
TCAATGCTTGTAGCCGTGGCTAGGTGGTCTACGAATCTGGTGTAATTTTTTTTATTTCTTGTGTTCGTTGTACTACCATG
ATTGGAGATGAATACATCGAAAGTTTCCCGCAAATAATTCTTTGCAATATAAGATGGGCATTTTGGCCTAGAGAGAGTAA
AGGTGGGGTAAACGGTAAATTGACCCTAGTCACAGTGGTCTCTACAATTCAGATCGGGTCAACCCGCCGTTGTTTTTTAG
AAGAAGTCGTTCTTTGTTTTTTTAGGGGTATAACTAAGCTTTATTGATTATAGTCGACACGAAGTGGTATACAAAAAGGA
TTATGGGGATGGATGAACCAAATATGTCACCCCTGATGATGAGTGTTTAAAAACTTAGCTAACCTATCTGCATCAGTATT
TGATGCCTGACCTTTAAAAATAAACTTACAATTAATTAAACCAGCTCACCGCTTAATCTCAGTAATGGTACAACTATAAG
TGCTACTATTCCCTCTTTCAATGTTGTTCACCACCTGCTTAGAATCGGAGGCAATTATAACATTTTGAATCATCAAGTCT
TCTGCGAGAGCCAAATCTTCTCTGCATGCCAACGCCTCGAGTGTGACTACATCGATGATTCCCCGGACAACCAGAGAAGA
GCTGCCCAAATATCATCATCTCGGCACACTGCACATGCCGCTCCTCTCAATTTAGAATTTGCCACGATATCGACACGTTC
TTTGTTTTTTGTTTTTGTTTTATTCTTTGTTTGTTGGAAAAAGAAAGAACATAATGGGCCACATTCGAACCTGATGGGCC
GCCAGCCCAGGCGAGCGGTAGCAATCGAATGCTCCCGAACGGTTTTCC--------------------------------
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---------------------------------------------------------AACTCGGCCGGGGAGTCGGGCTG
AGCAATTGAGGATTTGAGGAAGCCAGACTTGGCGGACAGATCCAGGGAGATGGGGCTCAAGGGGAACAAGCGCTTCGGCG
GCCGCGGCGGCGG------CGGCCAGCCGCCGGCCAAGCGCCAGGCGGCCGGGAAGGACGGCCCCGCCGAGGAAACCGAC
GACGGCATCGTCGTCGCGCAGGTGTTGTTTCCGTACTCCCGACCAACCTACCGCTCCCTCTCAAAAGGCAGATCCCTAAA
ACCCTCGACCCGTGGATTTATTTATTTTTTCATTCTTCC-CTTCAGATATCGAAGAACAAGAGGGTGGCTGTGAGGAGCT
GGAACGGCAAGGTGATGGTCGACATGCGCGAGTTCTACGAAAAGGACGGCAAGAGCCTCCCGACCCGCAAAGGTATCCTG
GCATTTCTTTCTTGTTCCGTAGTAGCATGTTCGA----------------------------------------------
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--------------------------------------------------------GTTCGAAACCTGAATGTTTGCCTG
TGCACTTGCGTATTGTATTATTACCCTGCCGTAATCCATGTGGATCTGAAATATGT-TATTATCTGAATGTCAGAAC-AT
TGCATTTCTTTTGCCTACGTGGAAGGTGGGCATATGTTAAATCTTGGGGACACCTGATGCATCTAGTGGTCAACTACAT-
ACATGTGGCCCGTAATTGCTTTTTGTATTGTCCGTGCTTGGTAATGGCACTCTGTTAAGTGTAAAGCACTCTATTAAGTG
AATGCTTTATGAATGAGCCAGGAGGAAGTGCAATAACAAATTCTTCCCTTTAGCAATTAGTTTGGT--TACACCAATGAA
GGGTCTTCAGCCTTGATATGACTTCCCCACCCACTAACATT-ATAATGGATGGATGTCCATATCTTGAAACAGGCATACA
AAAATGAGCATCCTTGTGT----TTAGCACACTATGTTGTAAGCTCAAGCAGGTGATGAACATGACATTCTGCAAAATAC
TTATTGTAGCTGTAGGTAGAGACTACCCCCATTTAATCCGCGTCTTACGTCTTGACGTTAATCCTT-GACTACCTTTTGT
CTATGCACTTCTTGGATCAGTTGAAAATGCAATATTTGGTCAAATGATGAAGCAGGGGT---TCATACTTCTGATCACAG
ATATTTCATTACCCTAGTTGATAGATATAAATGAGTTAAG------TTCTTAGATTTTGTGAGAGTATAATAAAC-GTCT
GAATGTGTACCTATGCCACTGACTTCATTTTTAAACCCAGAATACCGTTCTATGTTCTACTCATTCAGTATCATTGAATA
CCAGTTGCCAGAAATGAT--------------------------------------------------------------
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-----------------------------------------------------TATCTTAAGTGTGGGTGCATTCTATTG
GAATCTGGACGTACACATGCTGGCATTTTTTTTTTTTTGCTTATTTCCCTCAAGCTCAAGTACTAT-CTGTAATGTTTTC
AGTTTAAAAGAATGTACTATCTGTTATAATTGTTCAAGATGATGCTATAGCTTTTCGGCTTATTATTTCATTTTCCTTTT
TTCAGGTATATCGCTTTCAATGGATCAGGTAAGATGCATTTCAAGATCTATTTGTATCCTATACGCATAAAGCAAATCTG
TTACCCTGAGAAGATAGATCATGATCTGTCTGAAATGTGAATGATACATTAGAATATCTAGTAGGCGGCGTGAAAATTTC
TTGGCAAGCTTTGACATCCTTTTTTTAGCATGAAG---------ACACGTCAGAGGATACTCCTACCTTAAAGCCGAATA
ATTTTAGTTTCAGTGCCCATCTCTCATGCTGTCTGTTACAGGAACATGATCACAAGTACCTTAAT--ATGTTAAATTTGC
GTGCACGTAACGTCAAGTTCGGGCCTATTGCCACATACGTACATGCCATGATTGTCTTTGTTGGCTGTGATCGACTTGC-
---TGTATAGGTGGTACTCTGGTAGCAACCAACTATTGTGTGATCTTTTACTTGGGTTTGCAGCAACAAACCATCACTTC
CTTCCTATAACAGCTCACTAGTTTTTTACATGTGCAGTGGAAGATACTGAGGGACAACATCGAAGCTATAGACGAGGCCA
TCAAGGAGAACACTTGATCGGAAAAGCGGCTAAGGAGATATTGCTGGGCAAAGTTTC-GCTCATTTGCTGCTTAAGTATG
CTG---GTAGTCTAGTGCTGTTTTTAGTCACACC-TTACCTGGAATGTTGCACTTATGGTGGACTGTAACTATTGTTGTC
GTGAAGGTGACCTAATGCTAATGGTAGAATGGTTTTAGGGGATACACCCGGACACTGACCGGGTGCGTCGGCGGACGTTT
GAGGGGTCAGATTTGTGCATCGTGGTTGTAGATGTAGTAGGGTATCATTCCGTTAGCCCCTACCTGGTAGGAATCGGGTC
CAAACCCCAGTTGAATCTTATGGTTTCGCCCTGGCTGGGGTTTGATCCTGGTCCACCTTGTGCATCGGTTAAACCCGGTC
AGGATATATCCCTGGCATAACCCATTCCAAATCCCTGTGTTCCACTGTTAAAATCATCTTGTCATGCTATCTAGAGAGGC
GTTCAGTGGTATTTGTTCCCCTTTTCCTTTTCTTGTACTGTTTCGTGGGGTTGGAGAAGATAATTTTACCCTGGTGGAAC
TTTGATGTGGATGGAGAATTATTAATCATAAGTAGGCGAAAGGTGGGCACATGATCTTCTGTTAGGTCAGACAGCATGTG
TATTAGTACGGTTAGGACATGAAATACCCGTTGAGACATGCAGTAACAAGCCTATTGAATAAAGGGAGCCCACCTCTAAG
GGCATCCCTTTACATAAGGGACAAAGCAGTGATTTAGCTGAACACTTAGGTGAGACCACAGAACCAAGTGCCAAGCAATG
GTTATTTGCTATGATCGAAACACGGAAACACTATCACATGCTGCCTTCGTTTGGATGGTGGTCACTCTTTGGACGTTGTG
GTGGGCGAGAAGAAAGGCAATTCATGAACAGATTTTCCAAAGCCCATCAGCTACTCACCAATTCATTGCACGTTTCATGG
CTGATCTGGAACTTTTGCCAAAGAAGATTGTCCAGCAGCGACGTACACCAGCGAACGTACCC
>chr5D_823
T-------------------------------------------------------------------------------
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-----------------------TCTTTCTTTGCT-GAAAAAAAACCATCATAATAGCCCACATTCGAACCTGATGGGCC
GCCAGCCCAGGCGAGCGGTAGCAATCGAATGCTCCCGAACGGTTTTCC--------------------------------
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---------------------------------------------------------AACTCGGCTGGGGAGTCGGGCTG
AGTC---GAGGATTTGAGGAAGCGAGACTTGGCGGAGAGATCCAGGAAGATGGGGCTCAAGGGGAACAAGCGCTTCGGCG
GC------GGCGG------CGGCCAGCCGCCGGCCAAGCGCCAGGCGGCCGGGAAGGACGGCCCCTCCGAGGAAACCGAC
GACGGCATCGTCGTTGCCCAGGTGATGGCTCCGCACCCCTCACCAACCTATCGCCCCCTCTCAAAAGGAAGATCCCTAAA
ACCCTAGACCCGTGGATTT-----TTTTTTAATTCTTGCACTTCAGATATCGAAGAATAAGAGGGTGGCTGTGAGGAGCT
GGAACGGCAAGGTGATGGTCGACATGCGCGAGTTCTACGAAAAGGACGGCAAGAGCCTCCCGACCCGCAAAGGTATCCTG
CCATGTCCTTCTTGTTCCGTAACACCCATGGGTGTCAAGTGTCAAAAGTGTGTTGTCTGTTGTGTTGTGTGGTCTCAATT
GGATGGGATTGCATTTCCTTGCCCTAGCTCGTACCATGCCCATGTA-----------------TATATTGTATAAATGTT
--------------------TGAAACCTGAATGCTGTCTGCCACTCTAGGTAGTGTGTTC---ACCTGAATGTTTGCTTT
TGTGCCTGCGTGTTGTATTG---CCCTTCCATAATCCATGTGGATCTGAAATATGTGTATTGTCTGAATGTCAGCAC-AT
TGCATTTCTTTCACCTACGTGGAAGGAACACATATGTTGAATCTTGGGGACACCTGATGCATCTAGTGGTCATCAACATA
ATGTGTGACCCGTATT---TTTTTTTATTCTTTGTACTTGGTAATGGTACTCTGTTAAGTGTAAAGCACCCTATTAGGTG
AATGTTCTATGAATGAGCAAGTAGGAAGTGCAATAACAAATTATTTCCTTTAACAATCAGTTGGATTATACATCAATGGA
ACATGTTCAGCCTTGATACGACTTCTCCATCCACTAACATT-ATAATGGATGGATGTCCATATCTTGAAACAGGCATACA
GAAATGAGCATCATTGTGTAACCTTAGAACGCTATGTTGTAAGCTCAAGCAGGTGACGAAAACGGCATTCTGCAAAATAC
TTATCATAGCTGTCGGTAGAGAGTACCCCCATTTAATCTGTGTGTTACATGTTGACGTTAATCCTTGGACTACCTTTTGT
CTCTGCACTTCTTGAATCAGTTGAAAATGCAATATTTGTTCAAATGATAAAGCAGGTGT---TCATACTTCCGATTACAA
ATATTTCATTACGATAGTTGATAGATATAAATGAGCTATAGTCTAATTCTTAGATTTCGTGAGAATATAATAAAC-TTCT
GAATGTGTAACTATGCAGCTGACTTCAGTTTTAAACCCAGAACAAGGTTCCAAGTTCTACTCATTCAGTATCACTAAAGA
CCAGTTGCCAGAAATGGTAC------------------------------------------------------------
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--------------------------------------------------------CTTAAATGTGGCTGCATTCTATTG
GAATTTAAACTAACACATGGTGGAAAAAAA------TTGCTTATTTCCCTCCAGCTCAAGCACTAT-CTGTAATGTTTTC
AGTTAAAAAGAATGTACTATCTGTGATAATTGTTCAAGATGATGCTATAGCTTCTTGGCTTATAGTTTTGTTTCCCT-TT
TTCAGGTATATCGCTCTCAATGGATCAGGTCAGATGCATTTCCATATTT-TTTTTATCCTATACGCATAAAGCAAATCTG
TTGCCCTGAAAAGATAGATCATGATCCTTCTGAAACGTTAATGCTGCATTAGAATATCTAGTTGCCCGTGTGAAAATTTC
TTGGCAAGCTTTAACATCCTTTTTTGAGCCTGAAGATATCACGAACACATCAGAAGATACTCCTACCTTAAAGCTGAATA
ATCTTAA----AGTACCCACCTCTCATGCTGTCTGCTACAGGAACATGATCACAAGTATCTTAAT--ATGTTAAATTATC
GTGCACGT-ACGTCAAGTTCGGGCCTATTACCATATA--TATATGCCATGATTGTCTTTGTTGGCTGTGATTGACTTGTA
TAGCGCAC-----------------------T------TGTGATCTTTTACTTGGGTTTGCAGCCGCAAGTCCTCACTTC
CTTCCTATAACAGCGCACTTGTTTTTTACATGTGCAGTGGAAAATACTGAGGGACAACATCGAAGCTATAGACGAGGCCA
TCAAGGAGAACACTTAATCGGAGAAGCGGTTAAGGAGATATTGCTGGGCAAAGTTTTTGCTCATTGGCTGCTGAAGTATG
CTAGTAGTAGTGTAGGGCTGTTTTCAGTCACACCTTTACCTGGAATGTCGCACTTATGGTCGAATGTAACTACTATTGTC
CTGAAGGTGACCTAATG---------------------------------------------------------------
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>chr5B_824
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-----------------------TCTTTGTTTGTT-GAAAAAAAAAGAACATAATGGGCCACATTTGAACCTGATGGGCC
GCCAGCCCAGGCGAGCGGTGGCAATCGAATGCTCCCGAACGGTTTTCCGGGAGCTCCTATGTGCCGCTTATTGCGGCACA
CAGTCGGGACTTCGCACAGGGGACCGGCCAACTGGGCCGGCCCATCGGGGCGTGCCATACTGTAGCGTGTAGCGGGGCGT
GTGGATACTGTAGCGGGCGAATAAGTCACAAAAAATTGTACGCGATGCAGTGGGTTCGAACTGTAGACCTCCCGCTACGG
TTGATTGTCCATTGCCACCTGACCTAACAACTGTTACTGACTTAAACTGCAGCGCAAATTCTTAAGAAGGAACGCCAACA
ACAGATCTGATTTTTGAATAAAGTTCAAACGCAACCTTTTCTCTGCAAACTTGCATATTATTATGAAACGCGCCTTTTTA
AAACATAGTAAAGAGTATTTCAGAAAAAGGAACTCAAACAGTTTTCTAAAACATAAAATATTTTTGGAAAATCTTGATTA
TTCTTGAAAACATCAACATTTTTTTAATCATTGATCAATTTTGAGAAACGGGAACATATTTTCAAAACTTTGAATGAAGT
TTGCAAAAACAGGAATATTTTTTAAAACTTTGAACAAATTCGAAAGTACGAACATATTTAGGGTCTACGAATTTTTTTTA
AATCGGGTATTCTTGAAATTCCGAGAACAACTGGAAAAGGTTAACATTTTTTGAAAATGGGAACATTTTAAACTGCTGAA
CAAAATATTAAAACGCGAACAATTTTTAAATACACGAAGATTTTTTTATACTCCGGAACAAATTTTGAAATTGGTAACAT
TTTCCAAACTCCTGATTTTTTTAGAAAAACACGAACAATTTTGGAAGCACATACATTTTTTTAAAACGGGAACATTTTAA
ACTCCCGAACAACATATTAAAATGCGAACAATTATTGAAAACACAATCTTTTTTTTTTAAATTCCGGAACAAATTTGGAA
AATGGAAACATTTTGTGAAACTCTTGATTTTTTTCTAAAAACACGAACAATTTTGAAAACACAAACATTTTTTGAAAGCG
GGAACATTTTAAACTCCGAAGAAAATAATAAACGCAGACAAAATTAGAAAACACAAACATTTTTTAAACTCGGGAACAAA
TTTGGAAAATGGGAACATTTTATGAAATTCTTCAAGTTTTCTAGAAAACAGGAACAATTTTGAAAACACAAACATTTATT
GACAATGGGAACATTTGTGCTTTAAAATTCCAACTTTTTGTTCCAAAATTTGAGTCATTTTTTGAATGTACGTTTTTTTT
TGAAAAAATGCGAACAAATTCTATGAAAACGAACAAATTTTAATTTTCCCAAACATTTTACGAAAACATGAACATTTTTG
GAATTTGAGAACAATTTTTTAAAGCACGAATGATTTTTGAATCTTGAGAACAAATTTGGAAGTGAACTATTTTTTAAAGC
ACGAACATTTTTTGAATCTTGAGAATAAATTTTGAAATGAAGAACAATTTTGAAAAATTCCGAACAATTTTGTAAAGCAT
GAACATTTTTTGAATCTTGAGAACAAATTTTGAAACAGGGAACAATTTTGAAAATTCCCAGACAAATTTGGAAGAGCGAA
CATTTTTTGAATATGTGAACCAAAAGTTGAAATCTGGTACATTTTCTAATTTTCGAAAGTTTTGAACTTTTTTGTGTAGA
GAGAACAATTTTTGAATTTTGAGAACATTTTTTTGAAACACGAACAAAACTTATAGTTTCGATATTTTTGAAAAAAAAGA
GAAGAAAAGAAAAAGAAATAAAAACTAAAATCCTAAACATTTTGGAAAACTGCGAATATCTTCCGAAAAATACAAAAAAA
AGAAATAAAAAAAGAAACAGAAAACGAAAAAAAAATAGAAACGTGAAAAACCAATAAAAGAAAAAAACGGTTCATGGAAC
CTACTAGAAGGTTCACAAAACCTGAGTGGGAAGCTCCTAAGTGGGCCGGCCCAAAAAGCATCGCTGCGCGCTCGTCCCTG
TGCGAAGCGGGGGCAGTTTGCCGCAGTGAGCGGCGAGTAGGATATTCCCGGTTTTCCAACTCGGCTGGGGAGTTGGGCTG
AGCAGTTGAGGATTTGAGGAAGCCAGACTTGGCGGAGAGATCCAGGGAGATGGGGCTCAAGGGGAACAAGCGCTTCGGCG
GC------GGCGGCGGCCGCGGCCAGCCGCCGGCCAAGCGCCAGGCGGCCGGGAAGGACGGTCCCTCCGAGGAAACCGAC
GACGGCATCGTCGTTGCGCAGGTTCTGGCTCCGTACTCCCGACCAACCAACCGCTCCCTCTCAAAAGGCAGATCCCTAAA
ACCCTAGCCCCGTGGATTT-----TCCATTCTTGAT----CTTCAGATATCGAAGAACAAGAGGGTGGCCGTGAGGAACT
GGAACGGGAAGGTCATGGTCGACATGCGCGAGTTCTACGAAAAGGACGGCAAGAGCCTCCCGACCCGCAAAGGTATCCTG
GCATTTCCTTCTTGTTCCGAAACACCCATGGGTGTCAAATGTCCAAAGTGCGTGCTGTGTGGCCTCGGTTCA--TCAGTT
GGATGGGATTGCATTTCCTTTCCCTAGCTGTCGGCCACTCGTGCGAGCAGAAGCGGCATCATGTATATTGTATAATTGTT
GGTAGTAGTACTAGTACGTTTGAAACCTGATTGCTCTCTGACACTCCAGGCTGCATGTTCGAAACCTGAATGTTTGCCTG
TGCGCCTGCATA---------------TCCATAATCCATGTGGATCTGAAATGTGTGTATTGTCTGAATGCCAGCACGAT
TGCATTTCTTTTGTCTACGTGGGAGGTACACATATGTTGAATCTTGCGGACACCTGATGCATCTAGTGGTCAAGTACATA
ACATGTGGCCTGTAATTACTTCTTTTATTGTTCGTGCTTGGTACTGGTACTCTGTCAAGTGTAAGGCA--CTATTAAGTG
AATGGTTTATGAATGAGCCAGTAGGAAGTGCAATAAAAAATTCTTTCCTTTAAGAATTAGTTGGATTA--CACCAATAAA
ACGTGTTCAGCCTTGATACGACTTGCCTACCCACTTAAAATCATAATGGATGGATGTCTGTATCTTGAAACAGGCATACA
AA-ATGAGCATCGTTCGGTAATCTTAGCATGCTATGTTGTAAGCTCAAGCAGGTGATGAACATGACATTCTGTAAAATAC
TTATCATGGCTGTAGGTAGAGACTACCCCCATTTATTCTGTGTCTTACATGTTGGCGTTAATCCTT-GACTACCTTTTGT
CTCTGCACTTCTTGGATCAGTTGAAAATGCAATATTTGGTCAAGTGATGAAGCAGGGGTTTGTCATACTTCCGATTACAA
ATATTTCATTGCCCTAGTTGATAGATATAAA--------------------AGATTTTGTGAGAGTATAATAAAAGTTCT
GAATGTGTACCTATGCAGCTGACTTTATTTCCAAACTCAGAACGCTGTTCCATGTTCTATTCGTTCAGTATCATTAAATG
CCAGTTGCCAGAAATGATACTCCCTCCATCCAAATATAATGGGCCTAATACATTTTTTGAGGCTGCCTTTGACCAACAAC
AACAACAAAGCCTTTAGTCCCAAACAAGTTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTCGCAACCAACTCATGGCT
CTGGCACATGGATAGCAAGCTTCCACGCACCCCTGTCCATAGCTAGCTCTTTGGTGATACTCCAATCCTTCAGGTCCCTC
TTAACAGACTCCTCCCATGTCAAATTCGGTCTACCCCGCCCTCTCTTGACATTCTCCGCATGCTTTAGCCGTCCGCTATG
CACTGGAGCTTCTGGAGGCCTGCGCTGAATATGCCCAAACCATCTCAGACGATGTTGGACAAGCTTCTCTTCAATTGGTG
CTACCACAACTCTATCTCATATATCATCATTCCGGACTGATCCTTCCTCGTGTCGCCACACATCCATCTCAACATATGCA
TCTCCGCCACACCTAACTGTTGAACATGTCACCTTTTAGTCGGCCAACACTTAGCGCCATACAACATTGCGGGTCGAACC
GCCGTCCTGTAGAACTTGCCTTTTAGCTTTTGTGGCACTCTCTTGTCACAGAGAATGCCAGAAGCTTGGCGCCACTTCAT
CCATCTGGCTTTGATTTGATGGTTCACACATCTTCATCAATACCCCCATCCTCCTGCAGCATTGACCCCAAATACCAAAA
GGTGTCCTTCTGAGGTACCACCTGGCCATCAAGGCTAACCTCCTCCTCCTCACACCTAGTAGTACTGAAACCGCACATCA
TGTACTCAGTTTTAGTTCTACTAAGCCTAAACCCTTTCGATTCAAAGGTTTGTCTCCATAACTCTAACTTCCTATTTACC
CCCGTCCGACTATCGTCAACTAGCACCACATCATCCGCAAAGAGCATACACCATGGAATATCTCCTTGTATATCCCTTGT
GACCTCATTCATTACCAATGCAAAAAGATAAGAGCTCAAAGTTGACCCCTGATGCAATCCTATCTTAATCGGGAAGTCAT
CAGTGTCGACATCACTTGTTCGAACACTTGTCACAACATTATCATACATGTCCTTGATGAGGGTAATGTACTTTGCTGGG
ACTTTGTGTTTCTCCAAGGCCCACCACATGACGTTTCGCGGTATTTTATCATAGGCCTTCTCCAAGTCAATGAACACCAT
ATGCAAGTCCTTCTTTTGCTCCCTATATCTCTCCATAAGTTGTCGTACCAAGAAAATGGCTTCCATGGTCGACCTCCCAG
GCATGAAACCAAACTGATTTTTGGTCACGCTTGTCATTCTTCTTAAGCAGTGCTCAATGACTCTCTCCCATAGCTTCATT
GTATGGCTCATCAGCTTAATTCCACGGTAATTAGTACAACTCTGAACATCCCCCTTGTTCTTGAAGATTGGTACTAATAT
ACTCCGTCTCCATTCTTCTGGCATCTTGTTTGCCCGAAAAATGAGGTTGAAAAGCTTGGTTAGCCATACTATCGCTATGT
CCCCGAGACCTTTCCACACCTCAATGGGGATACAATCAGGGCCCATCGCCTTGCCTTCTTTCATCCTTTTTAAAGCCTCC
TTGACCTCGGACTCCTGGATTCGTCGCACAAAATGCATGCTGGTCTCATCAAAGGAGTCGTCCAGTTCAATGGTAGAACT
CTCATTCTCCCCATTGAACAACTTGTCGAAGTACTCCTGCCATCTATGCTTAATCTCCCCGTCCTTCACCAAGAGTTGGC
CTGCTCCGTCCTTGATGCATTTGACTTGGCCAATATCCCTCGTCTTCCTCTCTCAGATCTTGGCCATCTTATAGATGTCC
CTTTCGCCTTCCTTCGTGCCTAACCATTGGTAGAGGTCCTCATATGCCCGACCCCTTGCTTCACCAACAGCTCGCTTTGC
GGCCTTCTTCGCCATCTTGTACTTCTCTATGTTGTCTGCACTCCTATCCAGGTATAGGCGTCTGAAGCAATCTTTCTTCT
CTTTAATCGCCTTCTGGATATCATCATTCCACCACCAGGTATCCTTATCTTTGCTTCTCCTTCCCTTGGACACTCCAAAC
TCCTCAGAGGCCACCTTACGAATGCAAGTCGCCATCTTCATCCACACATTGTCCGCATCCCCTCCTTCCTCCCAAGGGCC
CTCCTTAATGACCCTCTCCTTGAACGCCTGAGCTACCTCTCCCTTGAGCTTCCACCACTTCTTTCTAGGGACTTTGGCAC
GCTTATCCCGCTGGACACGAATCCGAAAGCGGAAGTCAGCAACCAGCAGCTTATGCTGGGGTACAACACTCTCTCCAGGT
ATCACCTTACAGTCTAGGCACGCATGCCTATCTTCTCTTCTCGAGAGGATGAAATCAATCTGGCTAGAGTGTTGGCCACT
ACTAAAAGTCACCAGATGTGATTCCCTCTTTCTAAAGAGGGTGTTAGCTACAATCATGTTGTAGGCTAGAGCGAAGCTTA
AGACATCTTCTCCTTCTTGATTCCTGATGCCATAGCCAAAGCCCCCATGCGTCCCTTCAAAACCTGTGTTAGATGTACCC
ACGTGGCCATTGAGGTCTCCTATGAAGAGCTTCTCACCAATCGGTACACTCCTAACCATGTCTTCCAGGCCTTCCCAGAA
CTCCCTCTTGGTGTTCTCATTGTGGCCTACTTGCGGGGCATACGCGCTGATAACATTGAGAACCAAGTCCTCAACTACCA
GCTTGACCAGGATAATCCGGTCCCCACGTCTCTTGACGTCTACCACTCCATACTTGAGGCTCTTGTTGATCAAGATGCCT
AGGCCATTTCTGTTTGCAGCCTTTGACCATTGATAAAAAATTAATATATGAGATGTATGATATAAAAAATACTCCATCTA
TCATTAGAAACTTTCACGTACAAATTTAACGGTATGCTTTGTGTAACATGCATGTCATACATTATTGTTCTAACTCATGG
TCAAAGGTAACATCAAAGAACGTATTAGGCCCTATATATCTGAACGGAGGGAGTATCGTAAGTGTGGGTGCATTCTATTG
GAATTTGGACGTCCTCATGCTGGAAAAAAA------TTGCTTATTTCCCTCCAGCTCAAGTACTATTCTGTAATGTTTTC
AGTTAAAAAGAGTGTACTATCTGTAATAATTGTTCAAGATGATGCTGTAGCTTCTTGGCTTATTATTTTGTTTCCCTTAT
TTCAGGTATATCGCTCTCAATGGATCAGGTAAGATGCATTTCTTCATCTGTTTGTATCCTACACGCATAAAACAAATCTG
TTGCCCTGAAAACATAGATCATGT----------------ATGCTGCATTAGAATATCTAGTAGCCCGGGTCAAAATTTC
TTGGCAAGCTTAGACATCCTTTTTTGACA-TGAAGATGTCATGAACACATCAGAAGATACTCCT----------------
---TTAGTTTCAGTACCCATTTCTCATGATGTCTGTTACAGGAACCTGATCACAAGTATCTTATAACATGCTAAATTATC
GTGCACGTAACGTCGAGTTCGGGCCTATTGCCACATAC----ATGCCCTGATTGTCTTTGTTGCCTGTGATTGACTGACT
TATTGTATAGGTGGTACTCTTGTAGCTACCAT------TGTGATATTTTACTTGGGTTTGCAGCAGCAAGTCATCACTTA
CTTCCCATAACAGCTCGCTTGTTTTTTACATGTGCAGTGGAAAATACTGAGGGACAACATCGAAGCTATAGACGAGGCCA
TCAAGGAGAACACTTGATCAGAAAAGCGGTTAAGGAGATATTACTGGGCAAAGTG-TTGCTCATTCGCTGCTTAAGTATG
CTAGTAGT---CTAGGGCTGTTTCTAGTCACACCTTAT-CTGGAATGTCGCACTTATGGTGGACTGTAGCTACTGTTGTC
GTGAAGGTGACCTAATGCTGATGGTAAAAT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS------------S------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
----S-------------------------------S-------------------------------------------
--SSSSSS---------------------------------------------------------S--------------
--------------S---------S--SS---------------------------------------------------
-----S-------------SSSSS-------------S------------------------------------------
--------------------------------------------------------------------------------
-------S-------------SS-S-SSSSSSSS----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-S-------------SSSS----S--S------------------------------S------------S-----
---------------------------SSS--------S-----------------------------------------
-----------------S------S------S---------------S---------------------S----------
----S----------------S-----------------------S------S---------S-S---------------
SS--S-------------S-------------------------------------------------------------
------------S-----------------S-------------------------------------------------
----SS--------------------------------S-S-------S-S-----------------------------
--S--------------------------------------------------------------------S---S---S
-----------------------------------S--SS------------------------------------S---
----------------SS------------------------S--S----S------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S------------------S-SSSSSSSSSSS---------------S----------------------------
----S-------------------S----------------------------S-S------------SS---S------
---------------S--------------------------S-S----S------------------------------
--S------S----------------SS-------S--S----S-S------------------S-S-S-----------
-------------------------S---S------------------S-----S-------------------S-----
--S-----------S-------------------------------------------S------------------SS-
--------------------------------------S--S-----------------------------S--------
--------------------S-----S----SSSSSSS---------------------------S---SS---------
-------------------S----------------------S-------------------------------------
-----------------------------S--------------------------S--------S--------------
--S------------S--------------------------------S-----------------------S-------
-------------------S------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_726
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACAACCAGAGAAGA
GCTGCC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_7855
--------------------------------------------------------------------------------
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--------------GCCCATCTCTCATGCTGTCT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_730
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CCAGAGAAGA
GCTGCCCAAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_7919
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GC
GTGCACGTAACGTCAAG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_798
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTGCCACGATATCGACACGT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_7992
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CGACTTGCT
GTATAGGTGGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_3709
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTTGCCTACGTGGAAGGTGG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_8515
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CTGGGGTTTGATCCTGGTCC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
