>input_sequence_40552
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-ATGGACGCGGCGTGGGCGTGCGCGGTGGACCGTGCCGCCGGCGTGGCCGACTCCACCAGGCGCTTCTTCCTCTCCTTCC
GCCGCCCTCCCCCTCCGCAGCCCGGCCCCAACCCGGTAAGCGCGCGA-----CCTCCCTCGCCGTCCTCTCGCCCCGTAC
GAATTCCGAGGGTTTGTGGCCCGGCGCCAGGACAACAATGCCGGCCGCGGCCGGCCAT--------GCGCTCGGCCCGTC
TGGGCGCTCTGCGCATCGCCGGCCGGGCTCGGCGTCTCGGTTAGGAATGACCATGGCCTGTGCTGCTTACTGCTTGCG--
ACTGCCGAGGGAGCTGAATTGCCGTGGTACTGAAGAAGTAGCTTCTTCTTCAGATGTAAATCTATTCATAGTGGATAGTG
GTGCCACAAACCAGG--------GTAGATAACCTGCAAAAGGATGCGCTTTTGCTTGCACTGATTAT-------------
------ATATCTGCGAAGATTATATATAGCTCTTCCCTGCACAAACTTGTCTGATGA--TCTGCTGATCTGCAAAAACGA
ATGGATAGAAGATGTTGTTTGCTGCTAGTTTCTTAGCCTGGGAAACAAAGTGTCTCGATTACATCGCTGAGGGGGGGAAT
TTTTTCT---CCCCCGGGCTCGAGATACCCACTGTCTTTTCTAGCATACACCTGTAACCATTGTGGCGG------CGGGG
CACGAAGCTGGTTTTCAATTGG-TAGCACAGCTTTTTCTTCTTCTC-ATTCCTTTAAACACACGCATGTTTC--------
----------------------------------------------------------------------GTATCCTCTG
ATTTCATGTAAATTTGGAAGACGACAAGA-AAACCAACTTGTGTTGACCTCTCTGCCTTTTATTCTCTTTGCTGTATACT
GCAGACAGACATCTTGAAGCGTCTGCAGCGACAAGCGTTCTATGACATAATGCAGCTGAGGGATAGACAAGAGAAGGTCG
AGAAGGTGCTCACGCTGTTCAAATCTCACAAAATCGGTCCGTTTGCGGAAGAGAGCACCCAGGTCAAGGGCCTCGTCAAT
TTCGCCGGAGCCCTAGCACTAAACAGCAAAGAAGGCACGGAACTAGACAACTCAGAAGCAAATTCTGGCATCAGTTCACA
GTTTGCGTTCCGGACCAGTGTCCGGAAGAAGGATTCTCTCCTGGCAGAGCTTGCCACCGATTCCAGATACTTCTATCAGG
AAAA---TGATCTCATGGGGAGCCCTCTTGTGCTGTCGAAGGTGATGTACCTGGCAATCGTCGGCGACGACATTTCTGTT
GCTGCGGTGCCGGTAGGAGCAAGGTGTGATGATTTTTCAACCGATCCAAGCATCCAAGAGGTAATTGATTTCTTCATCCT
TGCACCTGTGCTTACACACTATCATTTTGCCTGCTGATATATCAGGTGATAGTTTCTTTGACAGGGGCAATGGGTTCCCA
ACTTCCATTCCTCGCTGAGGCCACCTCTGCTGCTTAAGCGTCACAGGCGCGCTGCTGGCTTGATACTGAAATCGCAGAAC
TTTGCAGCATCTCTCGCGGAGTTGATCTCAACAGCTGCGAAAAGCAATGGTGAAGCCA---GCAGTGTCTTCACAGGATT
CGGGCAGATTTCATGCAAGATGTGTGACGATATAAAGCTGACCATGTCCGCGGCCTGGCATGGACCGTCTGCGATTCCTC
GGAAGAGCAAACCGACCGCTGGAGGGTGCGTCGATCTTGAACTGAAATTTGACGAGGACTCAAGGGTCGGGGCCTGGGTC
GAGGTGAAGAGGTCGAACCCGAGGCAGCTGAAATGGGCCGTCACGCTGTCGGATACGCCGGAGAACGACCTAGGCTGGGG
AGTGAGCCTGCGGAGAGGCTCCGAGGGGGTGCCAGAGCGGATTCAGCTAGAAGGGTTTCTGAACATACATCTAGGCCAGA
ATGCCACCCTGCAGCCTGGTGTCATGTTCAACCTGGATGGGAGGCGATGCGCCCCAGCGGTCGTGTTCCGGTCAAGTTGG
TTCTTGTGA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr7A_1_TraesCS7A01G542800
CGTCTTCTTTTTACCTTTTGTTACTATCAAATATATATATATATATATATATATATATATATATATATATATATATATAT
ATATATATATGTAGCTTCAAGTTTCACGAC-----ATGTGATGTGATGTAATGTAACGCGTTGCGGTTTGATTTCTCGCA
GTCGGTCTCTTCCCTTTCGTTTTCCCGGTGGTGTTTTAAGGCAGTTCCCAAACTAGTCCTCATTTTGTTTACCACTTCTC
CTTCTAAGCAAGGCGCTATAGATAAACATATCGTTTTATTTGCGAGGATGTTTCAGAAATCATTGACTTTTAAACAGATA
AAAACAAGTACTATTTGGTTAGGTGATTTGTTAAGCTTTCACTGAAATAGCTGTCTCATATAGAAAAAATGTGAATCTGT
TTTTCAAGTGAATTCAGAATATGTTTTTCTTTTCAGCAAATCCAAAATATGTCCTAGCCCAGGGATATAAAAGTCTTCTT
GATGTTGAAGCCCAGACCGGCCCGCTCGTATCTCGGCGGCCTTTCAAGGCAGTTTTTAGACTAGTCTTCACACATTTCTA
ATCAAGATGCTACCTAGATATAAATTTTATTTGCGACGATTTTTCAGAAATCATCGACTTGCAAACAAACACAAAGAAGT
AT----TTGGTTATGTGATTTGTTAAACTTTCACTGAAATAGCTGTAAAACTTCCTAAATCTGTTTTTTCAGAGAATTCA
AAAATATGTGTTAATGCTGAAGCCCAGACGGGTCCACTCGTATCTCGGCCCGGCGGCCCGGCCCACCCCGTTCGCGTGAC
CCA----AAAGCG--------------------ACGAGGCG---AAAGCAGCGGAGAAAGGAAAAGCAGGGAAGCCTCGA
GACTCCTCCCCCCGGTCCTGTCCTGTCTCCCCCAGCCCCGGCGGCT--C--CCGCTCGACGGCCGCCGGCGAGCGCCGCC
AGGGAGGCAAGTGCGGGACAGAAGGCGGAACGCAGGCCGCGGGGCCAGGGCAGCCGTCCGTGCGGAGGGCAGGGGA-AGG
GATGGACGCGGCGTGGGCGTGCGCGGTGGACCGTGCCGCCGGCGTGGCCGACTCCACCAGGCGCTTCTTCCTCTCCTTCC
GCCGCCCTCCCCCTCCGCAGCCCGGCCCCAACCCGGTAAGCGCGCGA-----CCTCCCTCGCCGTCCTCTCGCCCCGTAC
GAATTCCGAGGGTTTGTGGCCCGGCGCCAGGACAACAATGCCGGCCGCGGCCGGCCAT--------GCGCTCGGCCCGTC
TGGGCGCTCTGCGCATCGCCGGCCGGGCTCGGCGTCTCGGTTAGGAATGACCATGGCCTGTGCTGCTTACTGCTTGCG--
ACTGCCGAGGGAGCTGAATTGCCGTGGTACTGAAGAAGTAGCTTCTTCTTCAGATGTAAATCTATTCATAGTGGATAGTG
GTGCCACAAACCAGG--------GTAGATAACCTGCAAAAGGATGCGCTTTTGCTTGCACTGATTAT-------------
------ATATCTGCGAAGATTATATATAGCTCTTCCCTGCACAAACTTGTCTGATGA--TCTGCTGATCTGCAAAAACGA
ATGGATAGAAGATGTTGTTTGCTGCTAGTTTCTTAGCCTGGGAAACAAAGTGTCTCGATTACATCGCTGAGGGGGGGAAT
TTTTTCT---CCCCCGGGCTCGAGATACCCACTGTCTTTTCTAGCATACACCTGTAACCATTGTGGCGG------CGGGG
CACGAAGCTGGTTTTCAATTGG-TAGCACAGCTTTTTCTTCTTCTC-ATTCCTTTAAACACACGCATGTTTC--------
----------------------------------------------------------------------GTATCCTCTG
ATTTCATGTAAATTTGGAAGACGACAAGA-AAACCAACTTGTGTTGACCTCTCTGCCTTTTATTCTCTTTGCTGTATACT
GCAGACAGACATCTTGAAGCGTCTGCAGCGACAAGCGTTCTATGACATAATGCAGCTGAGGGATAGACAAGAGAAGGTCG
AGAAGGTGCTCACGCTGTTCAAATCTCACAAAATCGGTCCGTTTGCGGAAGAGAGCACCCAGGTCAAGGGCCTCGTCAAT
TTCGCCGGAGCCCTAGCACTAAACAGCAAAGAAGGCACGGAACTAGACAACTCAGAAGCAAATTCTGGCATCAGTTCACA
GTTTGCGTTCCGGACCAGTGTCCGGAAGAAGGATTCTCTCCTGGCAGAGCTTGCCACCGATTCCAGATACTTCTATCAGG
AAAA---TGATCTCATGGGGAGCCCTCTTGTGCTGTCGAAGGTGATGTACCTGGCAATCGTCGGCGACGACATTTCTGTT
GCTGCGGTGCCGGTAGGAGCAAGGTGTGATGATTTTTCAACCGATCCAAGCATCCAAGAGGTAATTGATTTCTTCATCCT
TGCACCTGTGCTTACACACTATCATTTTGCCTGCTGATATATCAGGTGATAGTTTCTTTGACAGGGGCAATGGGTTCCCA
ACTTCCATTCCTCGCTGAGGCCACCTCTGCTGCTTAAGCGTCACAGGCGCGCTGCTGGCTTGATACTGAAATCGCAGAAC
TTTGCAGCATCTCTCGCGGAGTTGATCTCAACAGCTGCGAAAAGCAATGGTGAAGCCA---GCAGTGTCTTCACAGGATT
CGGGCAGATTTCATGCAAGATGTGTGACGATATAAAGCTGACCATGTCCGCGGCCTGGCATGGACCGTCTGCGATTCCTC
GGAAGAGCAAACCGACCGCTGGAGGGTGCGTCGATCTTGAACTGAAATTTGACGAGGACTCAAGGGTCGGGGCCTGGGTC
GAGGTGAAGAGGTCGAACCCGAGGCAGCTGAAATGGGCCGTCACGCTGTCGGATACGCCGGAGAACGACCTAGGCTGGGG
AGTGAGCCTGCGGAGAGGCTCCGAGGGGGTGCCAGAGCGGATTCAGCTAGAAGGGTTTCTGAACATACATCTAGGCCAGA
ATGCCACCCTGCAGCCTGGTGTCATGTTCAACCTGGATGGGAGGCGATGCGCCCCAGCGGTCGTGTTCCGGTCAAGTTGG
TTCTTGTGAG-----------TGATTTTGGTGTGATCCCTCTTGAGGATGTAGAGAAGTCGTGGTAGATCAGAGAAAGTA
GAAACAATCATTTGTGAAATCTGAAAGAATGACAGTAATTATCATTTTGTATGATGCTATGATAGGTTTTGTTATCATTA
TCATTGTCTAATGCTATGATCGGGTTT-GTTATCGCAGTGG-TTCATTATCATTATTCTTATGCTGCCCTGTGATACACG
TTCAGAAACAGATGTGTGTACCATTTTTGTGTTTGA---GTCAA-CCTGAAACTGAAATGGTGATGGGTTAG--CCACAT
GGAAAAGCAAAAAACACGCATGATCCATTACATCTCAAAC-CTTTTTACATGTAGTTAC--TACAAATTTGCCATAGAAA
TTTGGGCCTATAGTGCATC-CCTATGTCATCTGCAGCAGAATCTACTGGAAATTACAGAATTAATTTTCCCCTGACTACA
ACACACCAAGAAAAGGGGTGTTCTAC-TTTGCACAACCAAAGAA-TCATGATCGAACATTTC-GGTCCAGCCTAGCTTGC
CTGCGAAGTTCTTTTTACAGCAGGGAGCTCCACGGAGCTGAGGTCTGCGGGGTACGGAGTCCACAGCCCTAACCCTCCCC
TGCTCTCCTTCAGTCCCTTCTTCAAAATCTCGTCGATCGTCTTGGCCCACTCCACCTTCGATGAGTGCTCCCTCGTGTGT
CTGTGCAGGATGAACAGGGAATTGTACTCGCAGTTGGGGAACATGAAGAACTTGAGAGCGTCTCCGAGCCGATGGGCCAC
GTAGCCGAAGCTGAGCTGGTCACGAGGAGTGAAGAGGTTGACTTCGTTGAACCAGAGGCAGCTGAACAGATCCGTTATCG
TCGTGTGCTCCCTGATCAGCACTGCTCCTTCTGGTATGTCTGCAAGTCGCAGCTTGTTTGATTAGCACTGGGAGTTGAGT
AACTATGGTAGCACAACAGAAATACCCAAGAGGTGGAATGATTCGTCAGTTAGTTCATGCTGTACAATAAGCTTT
>chr2A_77
----------------------------------------------------------------------------ATAT
ATATATACGTGTAGCTTCAAGTTTCACGACATGTGATGTGATGTGATGTAATGTAACGCGTTGCGGTTTGATTTCTCGCA
GTCGGTCTCTTCCCTTTCGTTTTCCCGGTGGTGTTTTAAGGCAGTTCCCAAACTAGTCCTCATTTTGTTTACCA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------ATTTTATTTGCAGTGATTTTTCAGAAATCGTCGACTTGCAAACAAACACAAAGAAGT
ATGTATTTGGTTATGTGATTTGTTAAACTTTCACTGAAATAGCTGTAAAACTTCCTAAATATGTTTTTTCAGAGAATTCA
AAAATATGTGTTAATGCTGAAGCCCAGACGGGTCCACTCATATCTCGGCCCGGCGGCCCGGCCCACCCCGCTCGCGTGAC
CCA----AAAGCGACGAGGCTCGAACCCAACCCACGAGGCG---AAAGCAGCGGAAAAAGGAAAAGCAGGGAAGCCTCGA
GACTCCTCCTCCCGGTCCTGTCCTGTCTCCCCCAGCCCCGGCGGCT--C--CCGCTCGACGGCCGCCGGCGAGCGCCGCC
AGGGAGGCAAGTGCGGGACAGAAGGC--------GGCCGCGGGGCCAGGGCAGCCGTCCGTGCGGAGGGCAGGGGA-AGG
GATGGACGCGGCGTGGGCGTGCGCGGTG----------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr7D_711
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-AAAAAAGTCTTGATGCTGAAGCCCAGACCGGTCCATTTGTATCTCGGCCCGGCGGCCCGGCCCG-CCCGCTCGCGTGAC
CCG----AAAGCGGCGAGGCTCGAACCCA--CCACGAGGCCCCAAAAGCAGCGG-AAAAGGAAAAGCAGCGAAGCCTCGA
GACTCCTCCCCCCGGTCCTGTCCTGTCTCCCCCAGCCCCGGCGGCT--CTCCCGCTCCACGGCCGCCGGCGAGCGCCGCC
AGGGAGGCAACTGCAGGACATACAGAA-------GGT---GGCGCACGCGCAACCGACCGCGTGGAGCGCGGAGCGGAAG
GATGGACGCGGCGTGGGCGTGCGCGGTGGACCGGGCCGCCGGCGTGGCCGACTCCACCAGGCGCTTCTTCCTCTCCTTCC
GCCGCCCTCCGCCTCCGCCGCCCGGCCCCAACCCGGTAAGTGAGCATGCCCA-----CTCGCCGTCCTCTCGTCCCGTAC
GAAATTCGAGGGTTTGTGGCCTGGCGCCATGGCAACAATGCCGGCCGCGGCCGGCCGGCCGGCCAAGCGCTCGGCCCGTC
TGGGCGCTCCGTGCATCGCCGGCCGGGCTCGCCGTCTCGGTCAGGAATGACCATGCCCTGTGCTGCCTATAGTGTTTACA
ACTGCTGAGGGAGCTGAATTGCCGTGGCACTGAAGAAGTAGCTGCTTCTTCAGATGTGAATCTACTCATAGTGGGTATTG
GTGGCACAAACCAGG--------GCAGATAACCTGCAAAGGAGGCTTTTTTTTA-ATGGCATTGACCACTGACCGACCAG
CCCTGATGATCTGTGAAGATTATGTATAGCTCTTACTTGCACAAACTTGTCTGATGATCTCTGCTGATCTGTAAAAATGA
ATTGATC--------TGTTTGCTGCTAGTTCCTTAGCCTGGCAAATAAAGTGTCTCAATTACATCGGAGCTCGAGA----
---------CCCCTGGGGCTCGAGATACCCGCTGTCTTTTCTAGCATATATCTGTCACCATT---GCGG------AGGGG
CACAAAGTTGGTTATCAATTGGGTAGCACAGCCTTTTTTTTTCTCA-TTTCCTTTGAACATAGGCATGTTTTGTACTCCC
TCCGTCCGGAAAAGCTTGTCCCTCAAATGGATGTATCTAAGCTTGGGACAAGTTTTTTCGGACGGAAGGAGTATCCTCTT
ATTTCATGTACATTTGGAAGACGACAAGG-AAACCAACTTGTGCTGACCTCCCTGCCTTTATTCTCTTGCC--GTACACT
GCAGATAGACATCTTGAAGCGTCTGCAGCGACAAGCGTTCTACGACATAATGCAGCTGAGGGATAGGCAAGAGAAGGTCG
AGAAGGTGCTCACGCTGTTCAAATCTCACAAAGTCGGTCCATTTGCGGAAGAGAGCACCCGGGTCAAGGGCCTCATCAAT
TTCACCGGAGCCCTAGCACTGAACAGCAAAGAAGGCGTGGAACCATACAGCCCGGAAGCAAATTCTGGCATCAGCTCACA
GTTTGCGTTCCGGACAAGTGTCCGGAAGAAGGACTCTCTCCTGGCAGAGCTTGCCACCGATTCCAGATACTTCTATCAGG
AAAA---TGATCTCATGGGGAGCCCTCTTGTGCTGTCGAAGGTGATGTACCTGGCAAACGTCAGCGACCACATGTCTGTT
GCTGCGGTGCCGGTAGGAGCAAGGTGTGATGATTTTTCAACCGATCCAAGCATCCAAGAGGTAATTAATTTCTTCATCCT
GGCACCTGTGCTCATACACCATCATTTTGCCTGCTGATATATCAGATGGTAGTTTTCTTGACAGGGGCAATGGGTTCCCA
GCTTCCATACCTCGCTGAGGCCACCTCTGCTGCTTAAGCGTCACAAGCGCGCTGCTGGCCTGATACTGAGGTCGCAGAAC
TTCGCGGCCTCTCTCGCCGAGTTGATCTCAACAGCTGCGAAAAGCTCGGGTGAAGCCA---GCAGCATCTTCACCGGATT
CGGGCAGATTTCATGCAAGATGTGTGACGACATAAAGCTGACCATGTCCGCGGCCTGGCATGGACCGTCTGCGATTCCTC
GGAAGAGCAAACCGACCGCTGGAGGGTGCCTCGACTTCGAGCTGAAGTTCGACGAGGACTCGAGATTTGGGGCGTGGGTC
GAGGTGAAGAGGTCGAACCCGAGGCAGCTGAAATGGGCCGTCACGCTGTCGGATACGCCGGAGAACGACCTAGGCTGGGG
CGTGAGCCTGCGGAGAGGCTCCGAGGGGGCGCCAGAGCGGATTCAGCTAGAAGGGTTTCTCAACTTACATCTAGGCCAGA
ATGCCACCCTGCAGCCTGGTGTCATGTTCAACCTGGATGGGAGGCGATGCGCCCCAGCGCTCGTGTTCCGGTCAAGTTGG
TTCTTGTGAGGCCTGAGTGAGTGA-------GTGATCCCTCCTGAGGATGTAGAGAAGCCATGGTAGAGCAGAGCAAGTA
GAAACAATCATTTGTGAAGTCTGAAAGAATGACAGTAATTATCATTGTGTCTGATGCTATGATAGGTTTTGTTATCATTA
TCATTGTCTAATGCTATGATTGGTTTTTGTTACCGCAGTGGTTTCAATATCATTATTCTTATGCTGCCCTGTGATACACG
TTCAGAAACAG--ATGTGTACCATTTTTGTATTTGA---GTCAAGCCTGAAACTGAAATGGCGAAGATGGGTTACCACTT
GGAAATGCAAAAAACA----TGACACATTCCATCCTCAAC-TTTTTTACATGTAACGTAGTTACAAGTTCGTCGTAAAGA
TTTGGACCTATAGT-------CTATGTCATCTGCAGCAGAATCCACTGGAAATTGCAGAA---ATTTTCCCCCGACTACA
ACACACCAAGAAAAGGGGTGTTCTAC-TTTGCACAACCAAAGAAATCATAATCGAACGTTTCGGATCCAGTCTAGCTTGC
CTGCGAAGTTCTTTTTACAGCGGGGAGCTCCACGGAGCTGAGGTCTGCGGGGTACGGAGTCCACAGCCCTAACCCTCCCC
TGCTCTCCTTCAGTCCCTTCTTCAAAATCTCGTCGATCGTCTTGGCCCACTCCACCTTCGACGAGTGCTCCCTCGTGTGT
CTGTGCAGGATGAACAAGGAATTGTACTCGCAGTTGGGGAACATGAAGAACTTGAGAGCGTCTCCGAGCCGATGGGCCAC
GTAGCCGAAGCTGAGCTGGTCACGAGGCGTGAAGAGGTTGACTTCGTTGAACCAGAGGCAGCTGAACAGATCCGTTATCG
TCGTGTGCTCCCTGATCAGCACCGCTCCTTCTGGTATGTCTGCAAGTCACAGCTTGTTTAATTAGCACTGGGAATTGAGG
AACTATGGAAGCACAACAGAAATACTCAGGAGGTGGAATAATTCATCAGTTATTTCATACTGTACTATA------
>chr7B_712
AAAAAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------GTGTTGATGCTGAAGCCCAGACCGGCCCGCTCGCATCTCCGCCCGGCGGCCCGGCCCACCCCGCTCGCGTGAC
CCATCCAAAAGCGGCGAGGC--------------------G---AAAGCAGCGG-AAAAGGAAAAGCGGCGAAGCCTCGA
GACTCCTCCCCCCGGTCCCGTCCTGTCTCCCCCGGCCCCGGCGGCTCACTCCCGCCCGACGGCCGCCGGCGAGCGCCGCC
AGGGAGGCAGGTGCAGGATATACAGAA-------GGCGGCGGCGCACGCCCAACCGACCGCGTGGAGCGGAGCGGA-AAG
GATGGACGCGGCGTGGGCGTGCGCGGTGGACCGGGCCGCCGGCGCCGCCGACTCCACCAGGCGCTTCTTCCTCTCCTTCC
GCCGCCCACCGCCTCCGCCGCCCGGCCCCAACCCGGTAAGCGAGCATGCCCCCCTCCCTCGCCGTCCTCTCGCCCCGTAC
GGATTCCGAGGGTTTGTGGCCTGGCGCCAGGACAACAATGCCGGCCGCGGCCGGCC--------------------CGTC
CGAGCGCTCAGCGCATCGCCGGCCGGGCTCGCCGTCTCGGTTAGGAAGGGATAGTGGCTAGTAGCTT-------------
-----------------------------------------CTTCTTCTTCAGATGCAAATCTACTCATAGTGGATAGTG
GTACCACAAACCAGACCAGGGTAGTAGATAACCTGCAAAGGAGGCCTTTTTTTTCATGGCAGTGACCACTGGCCGACCAG
TGCTGAATATCTGCCAAGATCATATACACCTCTTGCCTGCACAAACTTGTCTGGTGA--TCTGCTGATCTGCGCAAACGA
ATGGACAGAAGGGATTGTTCGCTGCTGGTTTCTTAGCCTGGGAAAACAAGTGCCTCGATTACATCGGCGAGGGGGGGATT
TTTTTCTCTCCCCCGGGGCTCGAGACACCCGCTGTATTTTCCAGCATACATCTGTCACCATT---GCGGCGGTAGCGGGG
CACGAATTTGGTTTCCAATTGG-TAGCACAGCATTTTCTTCTTCTCGTTTCCTTTGAACATAGGCATGTTTT--------
----------------------------------------------------------------------GTATCCTCTG
TTTTTATGTGCATTTGGAAGACGACAAGAAAAACCAACCTGTGTTAACCACTCTGCCTTCTATTCTCTTTGTTGTGTACT
CCAGATAGACATCTTGAAGCGTCTTCAGCGACAAGCGTTCCACGACATAATGCAGCTGAGGGACAGGCAGGAGAAGGTCG
AGAAGGTGCTCACGCTCTTCAAGTCTCACAAAACCGGCCCGTTTGCCGAAGAGAGCACCCGGGTCAAGGGCCTCGTCAAT
TTCGCCGGAGCCCTGGCGCTGAGCAGCAAAGAAGGCGCGGAACCAGACGGCTCGGGAGCGAATTCCGGCATCAGCTCACA
GTTTGCGTTCCGGACCAGTGTCCGGAACAAGGACTCCCTCCTGGCAGAGCTTGCCACCGACTCCAGATACGTCTATCAGG
AAAACGATGATCTCATGGGGAGCCCTCTCGTGCTGTCGAAGGTGATGTACGTGGCGAACGTCGGCGGCGACATGTCTGTT
GCTGCGGTGCCCGTAGGGGCAAGGTGTGATGATTTTTCGACCGATCCAAGCATCCAGGAGGTAATTGATTTCTTCGTCCA
TGCACCTGTGCTTATGCACCATCATTTTGCCTGCTGATATATCAGGTGATAGTTTTCTTGACAGGGGCAATGGGTTCCCA
GCTCCCATTCCTCGCTGAGGCCGCCTCTGCTGCTCAAGCGTCACAGGCGCGCCGCTGGCCTGATACTGAGGTCGCAGAAT
TTCGCAGCATCTCTCGCCGAGTTGATCTCAACAGCCGCGAAAAGCAATGGTGAAGCCAGCAGCAGTGTCTTCACCGGATT
CGGGCAGATTTCGTGCAAGATGTGTGACGACATCAAGCTGACCATGTCTACGGCTTGGCACGGACCGTCTGCGATACCTC
GGAAGAGCAAACCGACCGCCGGAGGGTGCGTCGACTTCGAGCTGAAGTTCGACGAGGACTCGAGATTTGGGGCCTGGGTC
GAGGTGAAGAGGTCGAACCCGAGGCAGCTGAAGTGGGCGGTCACGCTGTCGGACACGCCGGAGAACGATCTAGGCTGGGG
CGTGAGCCTGCAGCGAGGCTCCGAGGGGGCGCCGGAGCGGATGCAGCTGGAAGGGTTTCTGAACTTGCATCTAGGCCAGA
ATGCTACCCTGCAGCCTGGTGTCATGTTCAACCTGGACGGGAGGCGATGCGCCCCGGCGCTCGTGTTCCGGTCGAGTTGG
TTCCTGTGAGGCCTGAGTGAGTGGTTTTGGTGTCACCCCTCCTGAGGATGTAGAGAAGCCATGGTAGATCAGAGAAAGTA
GAAACAATCATTTGTGAAGTCTGAAAGAATGACAGTAATTATCACTTTGTATGATGCTATGATAGGTTTTGCTATCATTA
CCATTGTCTAATGCTATGATTGGTTTT-GTTACCACAGTGGTTTCATTATCATTATTCTTATGCTGCCCTGTGACACACG
TTCAGAAACAGATATGTGTACCATTTATGTATTTGATGAGTCAA-CCTGAAACAGATATATGC----------ACCACTT
GGAAAAGCAAAAAACA----TGATCCATTCCATGCTCAACTTTTTTTACATGCAATGTAGTTACAAGTTCGTCGTAAAGA
TTCGGGCCTATAGTGCATCCCCTATGTCATCTGCAGCAGAATCCACAGGAAATTACAGAA---ATTTTCCCCTGACTACA
ACACACCAAGAAAAGGGGTGTTCTACTTTTGCACAACCAAAGAA-TCGTGATCGAACATTTCGGGTCCAGCCTAGCTTGC
CTGCGAAGTTCTTTTTACGGTGGGGAGCTCGACGGAGCTGAGGTCTGCGGGGTACGGAGTCCACAGCCCCAGCCCTCCCC
TGCTCTCCTTCAGTCCCTTCTTCAAAATCTCGTCGATCGTCTTGGCCCACTCCACCTTCGACGAGTGCTCCCTCGTGTGT
CTGTGCAGGATGAACAAGGAGTTGTACTCGCAGTTGGGGAACATGAAGAACTTGAGAGCGTCTCCGAGCCGATGGGCCAC
GTAGCCGAAGCTGAGCTGGTCACGGGGCGTGAAGAGGTTGACTTCGTTGAACCAGAGGCAGCTGAACAGGTCCGTTATCA
TCGTGTGCTCCCTGATCAGCACCGCTCCTTCTGGTATGTCTGCAAGTCGCAGCTTGTTTAATTAGCACTGGGAATTGGGG
AACTATGGTAGCACAATAGAAATACACAAGAGGTGGAATGATTCATCAGTTACTTCATACTATACAATAAGCTTT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
-------SS-----------------------------------------------------------------------
--------------------------------------------------------------------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS-----------SSS---------------S---------------------------
------------------------------------------------------------S-------------------
----------------------------------------------------------------------S---------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------SSSSSSSS----------------------------------------------
---------------------------------S----------------------------------------------
----------S-------S-----------------------S--SS---------------------------------
---------------------S----------------------------------SS----------------------
---------S---------------------S-------------------------------------SS-SS-SSS--
-----S---------------------S------------------------------------S---------------
---------------------------------------S-SSSS-SS----SSSSSSS-S-SSSSS-------------
----------------------------------S---------------------------------------------
-----------SSS-------------------------------S--------------------SS----------S-
--------------S---------------S-------------------S----S------SSS---------------
-------S------------------------S--------------S-------S----S-S--------S--------
--------------------------------------------------------------------------------
----------S------------------------------------------------------------S--------
-----S------------------------------------S-----------------------S-------------
------------------------------------------------------------S-------------------
--------------------S---------------S------S-----S---S--------------------S-----
---------------------------------S----------------------------------------------
---------------------------------------------------------S---------------S------
--------------------------------------------------------------------------------
--------------S----S-----------------------------------SS-----------------------
S----------------------------------------------------------S---------SS---------
--S--------------S--------------------------------------------------------S-----
------------------------------S-------------------------------------------------
----------------------------------SS-S--S-----S--S-----------S--SS-S------------
--------------------------------------------------------------------------------
S----------------------------S----------------------------------S---------------
-----------------------------------------------------------S--------------------
-----------------------------------------S----------------S-S-------------------
------------------S-------------------------------------------------------------
--------------------S--S--------S-----------------------------------------------
-------------S----------------S------------------------------S--S-SSSSSS------S-
----------------SSSS---------S----SSS----S------------S-SSS-------S--S-S-S--S-S-
-------------------------------------------S----------------SSS-----------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
-------------------------------------------------------------S------------------
----------------S---------------------------------------------------------------
---------------------------S----------------------------------------------------
----------------------S------------------------------------S-------------S-----S
-------------------------S------------------S-------S-----S----------------
>forward_256
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TCTC
CTTCTAAGCAAGGCGC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>reverse_2181
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------AAACAGCAAAGAAGGCACGG----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>forward_1357
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------CTGTGCTGCTTACTGCTTGC---
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>reverse_2537
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------TTTGACAGGGGCAATGGGTT----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>forward_2204
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------AGCAAAGAAGGCACGGAACT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_3301
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------CGGGTTTGTTATCGCAGTGG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
