>input_sequence_40540
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-------------------------------------------------ATGTATCACCAACATCAGGGCCCTAGTGAGC
TCTTCACTACTAGGACAACCTTTCCTATGGAGAGGCATCTGTTTCTGCACGGAGGAAGTACGCAAGGAGATTCCGGGCTA
GTTCTCTCAACCGATGCAAAACCAAGGCTCAAATGGACACCCGAGTTACATCAGCGATTTGTAGATGCGGTCAATCAATT
GGGTGGAGCAGAGAGTTAGTATACATCTATATGATTCTTATCTACTCATTGTACAGAAGTCCGCTGAATTCTTACACTCA
T--GTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTATGGGCATTCCAGGACTCACCTTGTATCATCTGAA
AAGCCACCTCCAGGTACATGATAATCATAAATTCTCATGTTAAAAATGGCGCCCATAACTGCAGTCAAGTCAGAATTTCT
TTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGTTAACGTCGGGACAAACAAGAACAGTAAGCCCAA
GTTTAACTTCTATAGTTCCATCTTTACCATTATAATATATCTGTATAATAACACACAGGCCATGAAATTTTGCAGCCATA
GGATGTGCAATTGCAGCTGATGGCATGCCCGGAACAAGTGTGCCAGCGATGATCAATACAAATGTCATTCCACAGCCAGA
GAAGTAAGGAAACTGGCCATGCAATTCAGAATTGTATTTCATGTGAATATTGAAGTACTAATCTCTCTTAATGGGTGACA
GAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAGAGACAATTAAACGAACAACTCGAGGTGAGGTAC
TGAAACTAATTGTGTAATAAGCTCTTAACCAAGACAATTCATTAGATGCACACAGTAGATGGAAATCAAGATAA-CTGAA
TCAAGCATCCAGCTACCACTCTCGTGCCAACCAAATAAAAAACTGATAATGTATTCTAAATCCTTATTTGACACCTTTGA
ACGCTGCGCTTCCTTCAGGGATGGCCCCATAAAAGGAATACAGTCTAGCAATTAAAGAACCAAAAGAGCGAAAAAGCAAT
TTGGCATCACTCATTAAATTCAGATGCTTAATACCTTCTTCTAATGTAGCAATGAACTTTTGTCAAATTCCAGCTAAGTA
ACACACCATGCATGCAGTGACTAAAACATATCCATCAGTGCAGTGGTTCTAACCTGAAATTAAATTGGCAACAGGTACAA
CGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGCAGTTCTAGAGCAGGCACAAGAGAGCCTTGGAAA
ACAGAATTCGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATATCAGAACTAGTCTCACAAGTATCAAATGAATGTT
TCGGCAGTGCAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGACTAGAGCCAAGGCAAATCCAGTTCATGGAAAGT
TCAACCAATAACTGTTTGACTGCAGCCGGAGGATTCATCAATGAGCATAGACTACACAGCCATGGAATGCTCAAAGCATA
TGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCATGAGTATCAGTTTTCCCTTAATAGAAGCCTAAGCGAGC
GTAAGATGGGTCATTTGCACAATGTGAATGAGTACCACAAAGCAGAGTTTGGAAGTGAAAGTGACATGGAGATTCAACAG
GAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCGCCAGTTCGGCCTCAGGAAGCAAAGAAAGAGATGCAGACAG
ACTATATCTTGAAGAACCAAACTGCAAGAGACAAGCGGTTGAACATTCAGGTTTTGAGCATCCAAGTTCTGGGAAGAAAC
TTGATCTGAACACTCAAAACACTGACGATGGTGATCAAGGGTATAGGCATTTTGATTTAAATGGCTTCAGCTGGAGCTGA
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>chr1D_1_TraesCS1D01G305200
AGGTCCACACTTTTCTGGACTACAATGAGAATATGTACCAATCTCAGGAAAGGACACTGATGGAACTTGTGCTTGTTCAT
ATTCTATCCACTTTACAGTAGTACAAAGGACAGAATAAATTGACAGAAAAATTGTGTTTTTGTGTGAAT--TGTCACTCT
CCAAGAAGGCAACAAGTATCAGCAATGAAAAAAATAACTTAATTGATTCATTTAAACAAAGATACACATACTGCATTCCT
CTAAGAACATTAAAATCATTAATCACGTAACATGAACCAGCAACACTAAACTAAA----TAGTAACTAAGGTAACAGAGA
AGTTGCGCAAATATTTCCATCTCGGCAAAATGAGTGATTCGGAAAGGTATCTTTCATGCTCCAAGCAG--ATAGCAGATA
ATATGCCAAAAAATAACATTTTAGAAAGATAAATTGCTCCAGTTGTAGGTATTTATTCTGTAAGATAAATTGCTCCAGTT
GTAGGTATTTATTCTGTACACATACCTTCTACTGATCTAATGAGTAAAATATGCAGCTGAAGTTTCCATACAGAAATGCA
GAGAAAGCTAAAGGGCAAGTTTCATTACTGAGGGG-TACAAGGTTGATGTTACTCAGCTGTCACAGGTTGCTATTAGTAC
TGATATTTTTTATTTTGGTTATTATTTCCAAGAATAACTAAGGACAGCATCTTCTGTCAGTTGGGTTAAAGATTGTTCTT
CTGCTGCTTGTTCTAAGATGCTAGATTCTATGTTTCCCCATATAAGGAGCCCCTCACAGGGCATTCCTTATCAACCTGAG
AAGACCAAAAGGATATCAACAGGCTTAAGCTCACACGGAGAACAAGACTGGTATTCGTCTTGTCAGTAGGGAAATACTCA
ATACACAGTTTCAACGTGCAACAGCAAAGAGGAAGGAAGCGACTGCAGAACAAGTAAGAAGTTGGTTAGATCTTTCAGCC
CTCCACATTTCTGTTGTTCTAAAAATTTCTGTCCATTCTACAGCAGAAGATGTATCACCAACATCAGGGCCCTAGTGAGC
TCTTCACTACTAGGACAACCTTTCCTATGGAGAGGCATCTGTTTCTGCACGGAGGAAGTACGCAAGGAGATTCCGGGCTA
GTTCTCTCAACCGATGCAAAACCAAGGCTCAAATGGACACCCGAGTTACATCAGCGATTTGTAGATGCGGTCAATCAATT
GGGTGGAGCAGAGAGTTAGTATACATCTATATGATTCTTATCTACTCATTGTACAGAAGTCCGCTGAATTCTTACACTCA
T--GTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTATGGGCATTCCAGGACTCACCTTGTATCATCTGAA
AAGCCACCTCCAGGTACATGATAATCATAAATTCTCATGTTAAAAATGGCGCCCATAACTGCAGTCAAGTCAGAATTTCT
TTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGTTAACGTCGGGACAAACAAGAACAGTAAGCCCAA
GTTTAACTTCTATAGTTCCATCTTTACCATTATAATATATCTGTATAATAACACACAGGCCATGAAATTTTGCAGCCATA
GGATGTGCAATTGCAGCTGATGGCATGCCCGGAACAAGTGTGCCAGCGATGATCAATACAAATGTCATTCCACAGCCAGA
GAAGTAAGGAAACTGGCCATGCAATTCAGAATTGTATTTCATGTGAATATTGAAGTACTAATCTCTCTTAATGGGTGACA
GAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAGAGACAATTAAACGAACAACTCGAGGTGAGGTAC
TGAAACTAATTGTGTAATAAGCTCTTAACCAAGACAATTCATTAGATGCACACAGTAGATGGAAATCAAGATAA-CTGAA
TCAAGCATCCAGCTACCACTCTCGTGCCAACCAAATAAAAAACTGATAATGTATTCTAAATCCTTATTTGACACCTTTGA
ACGCTGCGCTTCCTTCAGGGATGGCCCCATAAAAGGAATACAGTCTAGCAATTAAAGAACCAAAAGAGCGAAAAAGCAAT
TTGGCATCACTCATTAAATTCAGATGCTTAATACCTTCTTCTAATGTAGCAATGAACTTTTGTCAAATTCCAGCTAAGTA
ACACACCATGCATGCAGTGACTAAAACATATCCATCAGTGCAGTGGTTCTAACCTGAAATTAAATTGGCAACAGGTACAA
CGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGCAGTTCTAGAGCAGGCACAAGAGAGCCTTGGAAA
ACAGAATTCGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATATCAGAACTAGTCTCACAAGTATCAAATGAATGTT
TCGGCAGTGCAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGACTAGAGCCAAGGCAAATCCAGTTCATGGAAAGT
TCAACCAATAACTGTTTGACTGCAGCCGGAGGATTCATCAATGAGCATAGACTACACAGCCATGGAATGCTCAAAGCATA
TGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCATGAGTATCAGTTTTCCCTTAATAGAAGCCTAAGCGAGC
GTAAGATGGGTCATTTGCACAATGTGAATGAGTACCACAAAGCAGAGTTTGGAAGTGAAAGTGACATGGAGATTCAACAG
GAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCGCCAGTTCGGCCTCAGGAAGCAAAGAAAGAGATGCAGACAG
ACTATATCTTGAAGAACCAAACTGCAAGAGACAAGCGGTTGAACATTCAGGTTTTGAGCATCCAAGTTCTGGGAAGAAAC
TTGATCTGAACACTCAAAACACTGACGATGGTGATCAAGGGTATAGGCATTTTGATTTAAATGGCTTCAGCTGGAGCTGA
ATTGTTAATGATATGCAATATGATTGAAGAGAAGAAATGATCATACAAATAATTTTTCCTGGCATTTTCAACACCATTAT
TTGGTGATTAAACTGCGTAGGTGAAG-AAAAAAATACTAGTACACCAGAGTTCAACCATTGAGTATAGAAACTGAGATGT
TATGGCTCAGCAGTTTAAATCTCCATTTCGAGAGGTGTAATACATATGAATAGGATATCAAATCCGTA-TAATAAAAAAA
GGAATAGGGATGCAATATAGGAATAGAATGCAGAAGGCAAAGATAGCTAGAGAACCACCAATCGAGTAAGCGCCACACTT
AATACAGGTAAACCATGGTGAGAAATACTCATCCATGTATATAATACAATTTCTCGGAATTTAAGCAGTAAGAATAGCAG
GGACTACCAGAACCTTACCCTCCCAAATAACACCGTTAAATCAATTTAGTAACAGAAGCTATCCCTGCCATTATGGGGAG
ACTTTCAGCTCAACACGGC-------TTAAAACAAAACCAAACAGTTCATCAATTGATGCAGACTTCATGAAAACAACTA
CCATCTCAG------------AGAATAAAGATGGAAGTAATTCGTCCGCAGTCATCTCTGCACATCGTTCAACCAGCATA
TAAACTGAGGTATCTATTCATCCACACAACACAAACAATTTTTGAGGGTAAGTCCATCGCAGTACTTGTTTGTATATCAA
------CAGGCAAGGCAAGAGTCACTTATTGCA---TATTT-AATTAAAAACTGGAAATGAAAGAGCAAAGCTATGTATA
ATCTTGGGGTGTGATGTGCATCACAAGTGATATAAGAAGACATGTATCTATTCCTTTGTTCCTCTCCTTATTCTCAACTA
TACTTGCCACAAGAGCAAGAGCACTGTATTATAGAGTATGC---A--ATAACTAGAAAACTA-----GTTTATTATGGAG
AGCAGTGAGCGCTGGTGTCTGTCATCCACTCATAGCTGCTACCACTACTACTTCTTGATCCGGCGCACCTTCTTGGCGCC
C
>chr1B_1
AGGTCCATACTTTTCTGGACTACAATGAGAATATGTACCAATCTCAGGAAAGGACACTGATGGAACTTGTGCTTGTTCAT
ATTCTATCCACTTTACAGTAGTACAAAGGACAGAATAAATTGACAGAAAAATTGTGTTTCTGCACGTAAGATGTCACTCT
CCAAGAAGGCAACAAGTATCAGCAATAAAAAAAATAACTTAATTGATTCATTTAAACAAAGATACACATACTGTATTCCT
CTAAGAACATTAAAATCATTGATCACATAACATGAACCAGCAACACTAAACTAAGTACTTAGTAACTAAGGTAACAGAGA
AGTTGCACAAATATTTCCATCTCGGCAAAATGAGTGATTCGGAAATGTATCTTTCACGCTCCAAGCAG--ATAGCAGATA
ATATGCCAAAAAATAACATTTCAGAAAGATAAATTGCTCCAGTTGTAGGTATTTATTA----------------------
--------------TGTACATATACCTTCTACTGATCTAATGAGTAAAATATGCAGCTGAAGTTTCCATACAGAAATGCA
GAGAAAGCTAAAGGACTAGTTTCATTACTGAGGGGGTACAAGGTTGATGTTACTCAGCTGTCACAGGTTGCTATTAGTAC
TGATA-TTTTCATTTTGGTTATTATTACCAAGAATAACTAAGGACAGCATCTTCTGTCAGTTGGGTTAAAGATTGTTCTT
CTGCTGTTTGTTCTAAGATGCTAGATTCTATGTTTCCCCATATAAGGAGCCCCTCACAGGGCATTGCTTACCAACCTGAG
AAGACCAAAAGGGTATCAACAGGCTTAAGCTCACACGGAGAACAGGACTGGTATTCATCTTGTCAGTAGGGAAATACTCA
ATACACAGTTTCAACGTGCAACAGCAAAGAGGAAGGAAGCGACTGCAGAACAAGTAAGAAGTTGGTTTGATCTTTCTGCC
CTCCACATTTCTGTTGTTCTAACAATTTCTGTCCATTCTACAGCAGAAGATGTATCACCAACATCAGGGCCCTAGTGAGC
TCTTCACTACTAGGACGACCTTTCCCATGGAGAGGCATCTGTTTCTGCACGGAGGAAGTACGCAAGGAGATTCCGGGCTA
GTTCTCTCAACCGATGCAAAACCAAGGCTGAAATGGACACCCGAGTTACATCAGCGATTTGTAGATGCGGTCAATCAATT
GGGCGGAGCAGAAAGTTAGTATACGTCTATACGATTCTTATCTACTCATTGTACAGAAGTCCGCTGAATTCTTACACTCA
TATGTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTATGGGCATTCCAGGACTCACCTTGTATCATCTGAA
AAGCCACCTTCAGGTACATGATAATCATAAATTCTCATGTTAAAAATGGCACCCATAACTGCAGTCAAGTCAGAATTTCT
TTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGTTAACGTTGGGACAAACAAGAACAGTAAGCCCAA
GTTTAACTTCTATAGTTCTATCTTTACCATTATAATAAAACTGTATAATGACACACAGGCCATGAAATTTTGCAGCCATA
GGATGTGCAATTGTAGCTGATGGCATGCCCGGAACAAGTGTGCCAGCGATGATCAATACAAATGTCATTCCACAGCCAGA
GAAGTAAGGAAACTGG-CATGCAATTCAAAATTGTATTTCATGTGAATATTGAAGTACTAATCTCTCTTACTGGGTGACA
GAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAGAGACAATTAAACGAACAACTCGAGGTGAGGTAC
TGAAACTAGTTGTGTAATAAGCTCTTAACCGAGACAATTCATTAGATGCACACAGTAGATGGAAATCAAGATAACCTGAA
TCGAGCATCCAGCTACCACTCTCGTGCCGACCAAAGAAAAAACTGATAATGTATTCTAAATCCTTATTTGACCTCTTTGA
ACGCTGCGCTTCCTCCAGGGATGGCCCCATAAAACGAATATAATCTAGCAATTAAAGAACCAAAAGAGAGAAAAAGCAAT
TTGGCACCACTCACTAAATTCGGATGCTTAATACCTTCTTCTAATGTAGCAACGAACTTTTGTCAAATTCCAGCTAAGTA
ACACACCATGCATGCAGTGACTACAACATATCCATCAGTACAGTGGTTCTAACCTGAAATTAAATTGGCAACAGGTACAA
CGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGCAGTTCTAGAGCAGGCACAAGAGAGCCTTGGAAA
ACAGAATTTGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATATCAGAACTAGTCTCACAAGTATCAAACGAATGTT
TCAGCAATGCAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGACTAGAGCCAAGGCAAATCCAGTTCATGGAAAGT
TCAACCAACAACTGTTTGACTGCAGCCGGAGGATTCATTAATGAGCATAGACTACACAGCCATGGAATGCTCAAAGCATA
TGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCGTGAGTACCAGTTTTCCCTTAATAGAAGCCTAAGCGAGC
GTAAGATGGGTCATTTGCACAATGTGAATGAGTACCACAAAGCAGAGTTTGGAAGTGAAAGTGACATGGAGATTCAACAG
GAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCACCAGTTCAGCCTCAGGAAGCAAAGAAAGAGATGCGGACAG
ACTATATCTTGAAGAACCAAACTGCAAGAGACAATTGGTTGAACATTCAGGTTTTGAGCATCCAAGTTCTGGGAAGAAAC
TTGATCTGAACACTCAAAACACTGATGATGGTGATCACGGGTATAGGCATTTTGATTTAAATGGCTTCAGCTGGAGCTGA
ATTGTTAATGATATGCAATATGATTGAAGCGAAGAAATGAGCATACAAATAATTTTTCCTGGCATTTTCAACACCATTAT
TTGGTGATTAAACTGCGTAGGTCAAG-AAAA-AATACTAGTACACCAGAGTTCAACCATTGAGTATAGAAACTGAGATGT
TATGGCTCAGCAGTTTAAATCTCCATTTCGAGAGGTGTAATACATATGAATAGGATATCAAGTCCGTAATAATAAAAAAG
GGAATAGGGATGCAATATAGGAACAGAATGCAGAAGGCAAAGATAGCTAGAGAACCACCAACCGAGTAAGCGTCACACTT
AATACAGGTAAACCATGGTGAGAAATACTCATCCATGTA-ATAGTATAATTTCTCGGAATTTAAGTAGTAAGAATAGCAG
GGACTACCAGAACCTTACCCTCCCAAATAACATGGTTAAATCAATTTAGTAACAGAAGCTATCCC--------------G
ACTTTCAGCTCAACACAGCTTAAAAGTTAAAACAAAACCGAACAGTTCATCAATTGATGCACACTTCACGAACACAACTA
ATATCTCAGAGAAGCGTGTGTAGAATAAAGATGGAAGTAATTCGTCCGCAGTCATCTGTGCACATCATTCAACCAGCATA
TAAAGTGATGTATCTGTTCGTCCACACAACATAAACGAGTTTTGAAGTAAAGTACATCGCAGCACTTATTTGTATACCAT
CAGCATCAGGCAAGGCAAGAGTCACTTATTGCA---TAATTCAATTAAAAACTGCAAATGAAAGAGCAAAGCTATGTATA
ATCTTGGGGTGTGATGTGCATCACAAGTGATATAAGAAGACATGCATCTATTCCTTTGTTCCTCTCCTTATTCTCAACTA
TACTTGCCACAAGTGCAAGAGCACTGTATTATAGAGTACTATATGTGATAACTAGAAAACTACTGTAGTTTATTATGGAG
AGCAGTAAGCGCTGGTGTC----ATCCACTCATGCTG----CTACTACTACTTCTTGATCCGGCGCACCTTCTTGGCGCC
C
>chr1A_1
AGGTCCATACTTTTCTGGACTACAATGAGAATATGTACCAATCTCAGGAAAGGACACTGATGGAACTTGTGCTTGTTCAT
ATTCTATCCACTTTACAGTAGTACAAAGGACAGAATAAATTGACAGAAAAATTGTGCTTCTGTGTGTAAGATGTCACTCT
CCAAGAAGGCAACAAGTATCAGCAATG-AAAAAAAAACTTAATTGATTCATTTAAACAAAGATGCACATACTGCATTCCT
CTAAGAGCATTAAAATCATTAATCACATAACATGAACCAGCAACACTAAACTAAATACTAGTAACG-AAGGTAACAGAGA
AGTTGCACAAATATTTCCATCTCGGCAAAATGAGTGATTCGGAAAGGTATCTTTCACGCTCCAAGCAGATATAGCAGATA
ATATGCCAAAAAATAACATTCCAGAAAGACAAATTGCTCCAGTTGTAGGTATTTATTC----------------------
--------------TGTACATATACCTTCTACTGATCTAATGAGTAAA-TATGCAGCTGAAGTTTCCATACAGAAATGCA
GAGAAAGCTAAAGGACTAGTTTCATTACTGAGGGG-TACAAGGTTGATGTTACTCAGCTGTCACAGGTTGCTATTAGTAC
TGATA-TTTTGATTTTGGTTATTATTTCCAAGAATAACTGAGGACAGCATCTTCTGTCAGTTGGGTTAAAGATTGTTCTT
CTGCTGTTTGTTCTAAGATGCTAGATTCTATGTTTCCCCATATAAGGAGCCCCTCACAGGGCATTCCTTATCAACCTGAG
AAGACCAAAAGGGTATCAACAGGCTTAAGCTCACACGGAGAACAAGACTGGTATTCGTCTTGTCAGTAGGGAAATACTCA
ATACACAGTTTCAACGTGCAACAGCAAAGAGGAAGGAAGCGACTGCAGAACAAGTAAGAAGTTGGTTAGATCTTTAAGCC
CTCCAAATTTCTGTTGTTCTAAAAATTTCTGTCCATTCTACAGCAGAAGATGTATCACCAACATCAGGGCCCTAGTGAGC
TCTTCACTACTAGGACGACCTTTCCCATGGAGAGGCATCTGTTTCTGCACGGAGGAAGTACGCAAGGAGATTCTGGGCTA
GTTCTCTCAACCGATGCAAAACCAAGGCTCAAATGGACACCCGAGTTACATCAGCGATTTGTAGACGCGGTCAATCAATT
GGGTGGAGCAGAGAGTTAGTATACATCTATATGTTTCTTATCTACTCATTGTACAGAAGTCCGCTGAATTCTTACACTC-
-ATGTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTATGGGCATTCCAGGACTCACCTTGTATCATCTGAA
AAGCCACCTCCAGGTACATGATAATCATAAATTCTCATGTTAAAAATGGCGCCCATAACTGCAGTCAAGTCAGAATTTCT
TTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGTTAACGTCGGGACAAACAAGAACAGTAAGCCCAA
GTTTAACTTCTATAGTTCCATCTTTACCATTATAATATATCTGTATAATGACACACAGGCCATGAAATTTTGCAGCCATA
GGATGTGCAATTGCAGCTGATGGCATGCCCGGAACAAGTGTGCCAGAGATGATCAATACAAATGCCATTCCACAGCCAGA
GAAGTAAGGAAACTGGCCATGCAATTCAGAATTGTATTTCATGTGAATA-TGAAGTACTAATCTCTCTTACTGGGTGACA
GAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAGAGACAATTAAACGAACAACTTGAGGTGAGGTAC
TGAAACTACTTGTGTAATAAGCTCTTAACCAAGACAATTCATTAGATGCACACAGTAGATGGAAATCAAGATAACCTGAA
TCCTTATTTG-------------------------------ACTGATAATGTATTCTAAATCCTTATTTGACACCTTTGA
ACGCTGCGCTTCCTCCAGGGATGGCCCCATAAAACGAATACAGTCTAGCAATTAAAGAACCAAAAGAGCGAAAAAGCAAT
TTGGCACCACTCATTAAATTCAGATGCTTAATACCTTCTTCTAATGTAGCAATGAACTTT-GTCAAATTCCAGCTAAGTA
ACAGACCATGCATGGAGTGACTAAAACATATCCATCAGTGCAGTGGTTCTAACCTGAAATTAAATTGGCAACAGGTACAA
CGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGCAGTTCTAGAGCAGGCACAAGAGAGCCTTGGAAA
ACAGAATTCGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATATCAGAACTAGTCTCACAAGTATCAAATGAATGTT
TCGGCAGTGGAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGACTAGAGCCGAGGCAAATCCAGTTCATGGAAAGT
TCAACCAATAACTGTTTGACTGCAGCCGGAGGATTCATCAATGAGCATAGACTACACAGCCATGGAATGCTCAAAGCATA
TGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCATGAGTATCAGTTTTCCCTTAATAGAAGCCTAAGCGAGC
GTAAGATGGGTCATTTGCAAAATGTGAATGAGTACCACAAAGCAGAGTTTGGAAGTGAAAGTGACATGGAGATTCAACAG
GAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCGCCAGTTCGGCCTCAGGAAGCAAAGAAAGAGATGCAGACAG
ACTATATCTTGAAGAAGCAAACTGCAAGAGACAAGCGGTTGAACATTCCGGTTTTGAGCATCCAAGTTCTGGGAAGAAAA
TTGATCTGAACACTCAAAACACTGATGATGGTGATCAAGGGTATAGGCATTTTGATTTAAATGGCTTCAGCTGGAGCTGA
ATTGTTAATGATATGCAATATGATTGAAGAGAAGAAATGAGCATACAAATAATTTTTCCTGGCATTTTGAACACCATTAT
TTGGTGATTAAACTGTGTAGGTTAAGAAAAA-AATACTAGTACACCAGAGTTCAACCATTGAGTATAGAAACTGAGATGT
TATAGCTCAGCAGTTTAAATCTCTATTTCGAGAGGTTTAATACATATGAATAGGATATCAAATCTGTA-TAATAAAAAAA
GGAATAGGGATGAAATATAGGAATAGAATGCAGAAGGCAAAGATAGCTAGAGAACCACCAACCGAGTAAGCGTCACACTT
AATACAGGTAAACCATGGTGAGAAATACTCATCCATGTATATAATACAATTTCTCGGAATTTAAGCAGTAAGAATAGCAG
GGACTACCAGAACCTTACCCTACCAAATAACACCGTTAAATCAATTTAGTAACAGAAGCTATCCCTGCCATTATGCGGAT
ACTTTCAGCTCAACACAGC-------TTAAAACAAAACCAAACAGTTTATCGATTGATGCAGACTTCACGAACACAACTG
ACATCTCAGAGAAGCATGTGTAGAATAAAGATGGAAGTAATTCGTCCGCAGTCATCTCTGCACATCGTTCAACCAGCATA
TAAACTGATGCATCTATTCATCCACACAACGCAAACGATTTTTGAGGTAAAGTCCATCGCAGCACTTATTTGCATACGAT
CAGCATCAGGCAAGGCAAGAGTCATTTATAGCATAATAATTCGATTAAAAACTGCAAATGGAAGAGCAAAGCTATGTATA
ATCTTGGGGGGTGATGTGCATCACAAGTCATATAAGAAGACATGTATCTATTCCTTTGTTCCTCTCCTTATTCTCATCTA
TACTTGCCACAAGAGCAAGAGCACTGTATTATAGAGTATGGAATA--ATAACTAGAAAACTA-----GTTTATTATGGAG
AGCAGTGAGCGCCGGTGTC----ATCCACTCATCGCTGCTACTACTACTACTTCTTGATCCGGCGCACCTTCTTGGCGCC
C
>SNPs
-------S------------------------------------------------------------------------
-----------------------------------------------------------S------S-S-----------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
------S-------------------------------------------------S-----------------------
---------------------S------------------------------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS------S-----------------------------------------------------------
--------------S-S---------------------------------------------------------------
-----S----S---------------------------------------------------------------------
------S-------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S--------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--S-------------------------S------S--------------------------------------------
--------------S-------------------S---------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
----------------------------------------S---------------------------------------
----------------------S--------S------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S----------S-------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
----------------S---------------------------------------------------S---S-------
S-------------------------------------------------------------------------------
--------S---------------------------S----------SS-------------S----S--------S--S
--------------------------------------S---------------S-------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
-------------------SSSS----------S--------S-------------------------------------
-
>forward_577
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TGCA
GAGAAAGCTAAAGGGCA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_1751
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATGGGTGACA
GAACTATGCAA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>forward_813
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TCAACCTGAG
AAGACCAAAAGGA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_2035
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GGAATACAGTCTAGCAATTAAAGAACC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>forward_1956
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CACTCTCGTGCCAACCAAAT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_3677
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------TCAA
CAGGCAAGGCAAGAGT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
