>input_sequence_40520
--------------------------------------------------------------------------------
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--------------------------------------------------------ATGAAAAAGCTCACACTACGGCGA
CTGCTGGCCGTAGCCATTAGTGTTGGAGCAGTCTTCATAGCCTTTACACCAGAGACATCTCACCGCTGCGACGCTGCTCA
GGCGGTGGCTAAAAGCATCTTCGTCGACCACACGGGCCGTGGTGACTTCAAGACCATCCAAGCAGCCATCGACTCCGTCC
CTTTCGGCAACAACCAATGGATCCGTGTCCACGTCGCCGCCCGCACTTACACGTGA--TATGTGCATCTTTCATTTGTTT
CATACATAGTATAAACGTTGTCTCAAAAGAAAAAAATCTTTCATACAGACACCATGTGCGTACGTAGTTGATTGTTATAA
TAATGAAGCAGATTTTGACTATGTTTTTT---------CATATTCTCGTAATGGATACACGATGAAGTGAGAAGGTGACT
GTGCCATTTAACAAAAGCTTCATCCTGCTGGAAGGCGAGGGGAGGTTGCAGACGTCCATCGAGTGGGCCGACCATGCCGG
CGGGTCGTCCACCACCGCCGACACCCCAACTTTTGCCTCTCATGCCGACGATTTCATGGCCCGTGACATCACGTTCAAGG
TTAGTATGTCACCCC----AATGGTTTTTCTCACCGCCCATATGATTGCCAGAAGATTTCAACCTT-GACTTGATTTATC
ATTGTAGAACACATACGACGGGGCCAGCCTGGCGCAAGCAGTGGCTGCCCTAGTTGACGGGGACCGGTCGTCATTCTATG
GATGTGGCTTCTTCAGTGTTCAGGACACGTTGTGCGATATGGCTGGGAGGCACTACTATGAGAATTGTGTCATCGGCGGC
GCCGTGGACTTCATCTTTAGCAACGCCAGGTCCATCTTTCAGGTGCAAATTAAATCAGGCCTGCCTATCAACTCTCAACA
TGTGTGTTTTTGTTTTCTAGAGAAAAAGGGCTTCTGCGGCCCTGGCTCCATTGCATACCAATGAAACCCAGCATGTGTGT
TGTTGATGATGGAATTGTGCATGCATGT---------TGTAGGGATGTAATCTATGGACAGGAAAGTTAACAAAGACGCT
GGGATCCATCACGGCGCATGGGCGAGACAGTGACAAAGATGACACCGCATTTGTGTTCAAACAATGCAAGGTGGGCGGCT
TCATGCCGATATACCTCGGACGTCCATGGCGAGACTATGCTAGGGTCATCTTCTACCAGACCAACATGTCTACCGTTGTG
GACCGCCAAGGTTGGGACATCTGGAACTCCAAGGGCAAAGAGTGAGTTTTAAACAAGCGGATCATCTAGAATGGATTTTG
TGCTTCTGAGTGTGCTTGCACATTT-ACTTTCAAAATATTAAAATGATTTTTACATTCTTAAAAAGTTGATAGTATATAT
GGTAGTATATTATGCACTTCCGGAATTTCTTAAGAAAAATGGCATTTTT-ATATACTTAAAAACCCTGAAAGGGGTCCAT
AGAATAGTACCCTTTTTTTGCGGAAGATAGAATAGTTCCATTTTGTACACTCAGGTTAGTTTCTTCCAAGCGACACAAAG
AACAAGTTTTTTTTCTTCTTCACCAAACTTAATGTCTACACATCCTCCCTCTGTAAA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CTAATATATGATCTTTCAGATCAATATCTTATTAGTTTACAGAGGAAGTAATACTTAGT-ATGTGTATG
CATGATTGTTATT------ATTAAAAAAAGAAAATACTATATTTTCTTGAGCCAGGATTGTGTGCTTCTGTGCTCACATA
ATAGTTTCATGTCGATCGTGCAGTTAAACGGTTGCACATATATATGATTTTCTTGGTCTTTGGTTTACTTGCAGGGGATT
GCTAACGATGGTGGAATCGGAGTGCATAGGGGCGGGGTCCAACACGACGGAGCGAGTACCGTGGGCCAAGCAGCTGAGTG
GCAAAGAAATCGCTACATTCGTCAGCTTGTCCTACATCTCTCCCGATGGCTGGCTCGACGCACAGCCACATTAG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr7B_1_TraesCS7B01G018800
AAAGAAAACTTTGTGTAAATCTTTGTAACACTCTTCTTCTTCTAATTGAAAGGCTGCGTTCCTATCAATTACTCGGAAAA
AAGTACAGTATTTCTCACCTGATTGCATGTGTCTCTCTTTGTAGAGAAAAAAAAAAGAAAACTATATCTCCCCCGATTGC
ATGTATATCTTTCTTCCTAGTTTACTTGCCGCTAATCAATAAATTAGACATGGGTAATTTCATCCTAAATTATCTATAGT
TATGTGATTTGGTCACCGTGCTGAAAATAATACATCTTACATAAAGGAACAGAGGGACTACTAGCAAGAGATGAGAATGA
AGATACGTCTGCTCTCAAACTTTGACCAAAATAACAAGACATTTAAGACATGGCTGACAACATACCATATTGAGGTTAAA
TTTTCTTTGCACTTAATTAAACTTTCATGTTTGTAGTAGGTAAAGTGAAAAAAAATCATACACAACATATATGGTAATGA
ATTATCCTATTTAGTTTTCATATATATCAAAATTACATAGTATAATTATATAATGTGAGGTTGTCGAGCTAAAATTGAGC
GAGCCAGTGTTGGATCATGGCCAGCTCGTTTCATGATTGAGGTTCATAAAGTGTTCATCCTCAGCTAGTCTCTTTTTGAG
TCGATCTTAAGTCGAACCAAAATATGAGTCATTCTCAAGTGGCTCACCAGCCTCGAGCATTTTTGCAGCCCTACATAGCG
AAGCCGAGAAGCCGCCCAACATTACA--ACATGCCCGCTGCATGGTTCGAGCGCATGTACAAGACATGAAATGGAAAGAT
ATCACCGTTCACCACGCATGGAAAGATGTGATTCGGAATCAGTCACTTACCAAACCTGGAGCACCCATCAGTGATTGCTC
ATTTCCAAACGGGCCTTATTTCTTTCCCGGTTGGTTCGAAAATTTGTCGAGCTT--------------CATTATATATCA
GTATCAGCTCTTTCCTTTTCATCTCTTTAGACTAGACTAATAGGTGACGAAGCTAAATGAAAAAGCTCACACTACGGCGA
CTGCTGGCCGTAGCCATTAGTGTTGGAGCAGTCTTCATAGCCTTTACACCAGAGACATCTCACCGCTGCGACGCTGCTCA
GGCGGTGGCTAAAAGCATCTTCGTCGACCACACGGGCCGTGGTGACTTCAAGACCATCCAAGCAGCCATCGACTCCGTCC
CTTTCGGCAACAACCAATGGATCCGTGTCCACGTCGCCGCCCGCACTTACACGTGA--TATGTGCATCTTTCATTTGTTT
CATACATAGTATAAACGTTGTCTCAAAAGAAAAAAATCTTTCATACAGACACCATGTGCGTACGTAGTTGATTGTTATAA
TAATGAAGCAGATTTTGACTATGTTTTTT---------CATATTCTCGTAATGGATACACGATGAAGTGAGAAGGTGACT
GTGCCATTTAACAAAAGCTTCATCCTGCTGGAAGGCGAGGGGAGGTTGCAGACGTCCATCGAGTGGGCCGACCATGCCGG
CGGGTCGTCCACCACCGCCGACACCCCAACTTTTGCCTCTCATGCCGACGATTTCATGGCCCGTGACATCACGTTCAAGG
TTAGTATGTCACCCC----AATGGTTTTTCTCACCGCCCATATGATTGCCAGAAGATTTCAACCTT-GACTTGATTTATC
ATTGTAGAACACATACGACGGGGCCAGCCTGGCGCAAGCAGTGGCTGCCCTAGTTGACGGGGACCGGTCGTCATTCTATG
GATGTGGCTTCTTCAGTGTTCAGGACACGTTGTGCGATATGGCTGGGAGGCACTACTATGAGAATTGTGTCATCGGCGGC
GCCGTGGACTTCATCTTTAGCAACGCCAGGTCCATCTTTCAGGTGCAAATTAAATCAGGCCTGCCTATCAACTCTCAACA
TGTGTGTTTTTGTTTTCTAGAGAAAAAGGGCTTCTGCGGCCCTGGCTCCATTGCATACCAATGAAACCCAGCATGTGTGT
TGTTGATGATGGAATTGTGCATGCATGT---------TGTAGGGATGTAATCTATGGACAGGAAAGTTAACAAAGACGCT
GGGATCCATCACGGCGCATGGGCGAGACAGTGACAAAGATGACACCGCATTTGTGTTCAAACAATGCAAGGTGGGCGGCT
TCATGCCGATATACCTCGGACGTCCATGGCGAGACTATGCTAGGGTCATCTTCTACCAGACCAACATGTCTACCGTTGTG
GACCGCCAAGGTTGGGACATCTGGAACTCCAAGGGCAAAGAGTGAGTTTTAAACAAGCGGATCATCTAGAATGGATTTTG
TGCTTCTGAGTGTGCTTGCACATTT-ACTTTCAAAATATTAAAATGATTTTTACATTCTTAAAAAGTTGATAGTATATAT
GGTAGTATATTATGCACTTCCGGAATTTCTTAAGAAAAATGGCATTTTT-ATATACTTAAAAACCCTGAAAGGGGTCCAT
AGAATAGTACCCTTTTTTTGCGGAAGATAGAATAGTTCCATTTTGTACACTCAGGTTAGTTTCTTCCAAGCGACACAAAG
AACAAGTTTTTTTTCTTCTTCACCAAACTTAATGTCTACACATCCTCCCTCTGTAAA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CTAATATATGATCTTTCAGATCAATATCTTATTAGTTTACAGAGGAAGTAATACTTAGT-ATGTGTATG
CATGATTGTTATT------ATTAAAAAAAGAAAATACTATATTTTCTTGAGCCAGGATTGTGTGCTTCTGTGCTCACATA
ATAGTTTCATGTCGATCGTGCAGTTAAACGGTTGCACATATATATGATTTTCTTGGTCTTTGGTTTACTTGCAGGGGATT
GCTAACGATGGTGGAATCGGAGTGCATAGGGGCGGGGTCCAACACGACGGAGCGAGTACCGTGGGCCAAGCAGCTGAGTG
GCAAAGAAATCGCTACATTCGTCAGCTTGTCCTACATCTCTCCCGATGGCTGGCTCGACGCACAGCCACATTAGCATTTC
CAGCAGGCTACTCCTAGTTAGCATTGCACAGGAAGTTTACCACGACCATCAGATCATGTGCCGGGACTAG----GATGCA
TGCATCACCCATGAAAACTGATGCACTCTGCGTGTAT-GGAGCTGCTTAATAAAAGATTAAAGGACATGTTTAATTATGG
ATCGA--------------------TCTCCCGCTACTAGAAATCCTCGCTTTCCATGCCAGGCAAAATAC-AAGGAACGA
CCTGAAAATGGTAAAAAGAACGTTTCCTTACGGATATTCCAAGAAAACGCGAGAGGGGAATAGAGAATGTCGATA-----
---GGAAAATGGGAAATAAATCCTTTCTTGTTGTTTTGTGCCTAACAATGCAAGGAATGCGTCGATCCCAACAATTTA-A
AATAG---TAGAACTTTGACCACATGGCTGCTCCCACGTAAAATCTCTCTCTCCACGGCTTCTCTTGCTGGGCTGAAATT
-TTTTCACGGAAAGGTTGAGTATAAGTGAAGATCATAGTAATATTAATTCCTTTCAATCACATTTCAACAACTATTTATG
ATCCAAAGTTCACATATTCGCATGCATCTTGGACAATGTCTTTGCAAGAGTGACACGGGAACGAGGATAGAGGGAGGAGC
GGACCAGGGAGAGAAAAGATAAGAGGAAGGAGACAATAGCTCATCGGTTGAGACTGCCCGCAGGATAGCCTCTCAGGCCT
AGGCGAAGGGAGCGCCGGGAGGGGCGGGCACCCTCGTTGATGATGAGGGCACCACTGCGGGTGCGGCGCCGCTACGGCGT
CTCTTCCGGCTCTGGCTTGACGGGACGGAGAGCCGGCGTGCCGGAGGAGAGCGAGCCGGAGCCTGACGACGAGGACGTCG
GCTCCATTCGCCACGGCGTCCAGAACTGCCGCGGCGGCGAGAGATGCACGGCCGCGTCGGGTACTCGAGGGGCGGCACGT
TGCCGGTCTCGATGTGGTCGAGAACGGCCTCGAGGGTGCGGCCAGGGACGCCCCACCACTCGCGCCGTCCATC
>chr7A_714
CATAGCAC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
AAGCCGAGAAGCCGCCTAATTACTACCTACATGCCCAGTGCATGGTTCGAGCGC-CGTACAAAACGTGAAATGGAAAGAT
ATCGCTGTTCACCACGCATGGAAAGATGTGATTCGGAATCAGTCACTTACCAAACCCGGAGCGCCCATCAGTGATTGCCC
GTTTTCAAACCGGGCTTATTTCTTTCTCAGTTGATTCGATTTTTTGTCGAGCTTCTCACCGTCTACTTCATTATATATTA
TCATTAGCCCTTACTTTCTCATCTGTTTAGACTAATAGGTACAA-AACGAAGAGACATGAAGAAGCTCGCACTACGGCGA
CTGCTGGCCATAGCCATTAGTGTTGTAGCACTCTTCATATCCTTTACACCCGAGACATCTCACCGCTGCGATGCTGCACA
GACGGTGGTTAAAAGTGTCTTCGTCGACCAGACTGGCCGAGGCGACTTCAAGACTATCCAAGCAGCCATCGACTCCGTCC
CTTTCGGCAACAACCAATGGACCCGAGTCCACGTCGCCGCCGGCACTTACACGTGA--TCTGTGCATCTTTCATTTGTTC
CACATA---TATAAATGTTGTTTCAATAGAAAAATAT----------------------------------------TAA
CAATGAAGCCGATTTTGACTATGTTTTTT---------CGTATTCTCGTAATGGATACACGATGAAGTGAGAAGGTGACT
GTGCCATTTAACAAAAGCTTCATCCTGCTGGAAGGCGAGGGGAGGTTGCAGACGTCCATCGAGTGGGCCGATCACGCCGG
CGGGTCGTCCACCACCGCCGACACCCCGACTTTCGCCTCTCATGCCGATGATTTCATGGCCCGCGACATCACGTTCAAGG
TTAGTATGTCACCCAACATAATGGTTTTTCTCACCACCGATATGACTGCAAGAAGATTTCAGCCTTAGACGTGAGTTGTC
ATTGTAGAACACATACGACGGGGCCAACCTGGCGCAAGCGGTGGCTGCCCTAGTTGATGGGGACCGGTCGTCGTTCTATG
GATGCGGCTTCTTCAGTGTTCAGGACACATTGTGCGATATGGCTGGGAGGCACTACTATAAGAATTGTGTCATCGGCGGC
GCCGTGGACTTCATCTTCGGCAACGCCAGGTCCATCTTCCAGGTGCAAATTAAATCAGGCATGTCTATCAGGTCTCGA--
-----------------------------------------------------------------------CATGTGCGT
TGTCAATGACGGTGC-----GTGTGTGTACGCATGCATGTAGGGCTGTGATCTATGGACGGGAAAGTTAACAAAGACGCT
GGGATCCATCACGGCGCATGGGCGAGACACTGACAAAGACGATACCGCATTTGTGTTCAAGCAGTGCAAGATCGGCGGCT
TCATGCCGATATACCTGGGACGCCCATGGCGAGACTATGCTAGGGTCATCTTCTACCAGACCAACATGTCTATCGTTGTG
GACCGCCAAGGTTGGGACATCTGGAACTCCAAGGGCAAAGAGTGAGTTTTAAACAAGCGGATCATTGAGAATGGATTTTG
TGCTTCTGAGTGTGCTTGCACATTTTACTTTTAAAATATTAAAATGATTTTTATATTCTTAAAAAAATGATAGTATATAT
GGTAGTATATTATGCACTTCCGGAATTTCTTAAGAAAAATGGCATTTCTTA-----------------------------
AGAATAGTACCCTTTTTTTTGCGGAGATAGAATAGTTCCATTTTGTACACTCAGTTTAGTTTCTTCCAAGCGACACAAAG
AACAAGTTTTTTT-CTTCTTCACCAAACTTAATGTCTACATGTGCTCCCTCTGTAAACTAAGGGCATGTACAATGGTTGA
TAAGATAGTCTTATCTTAAATTTTGCATATAATCTAGAGATAACAAAAAAAGAGTCTACAATGGGTCATCTCTTAGCCTT
ATCATCAATAACTAGCAATTTCTAAAGACATGGTGAGACATATTGTGCTAAAAGATCATCTCTTGTCTTCTCTTAAATAA
GAGAAGACAAGCCTTTTCTTATGAGTTCTCTCTCTTCCACCTCATCATTTATCCTACGTGGCACTCCTAAGATAGCACCA
TTGTACATATCCTAATATATGATCTTTTAGATCACTATCTTATTAGTTTACAGAGGAAGTAATACTTAGTCGTGTGTATG
CATGATTGTTATTGTTATTATTAAAAAAAGAGAATAATATATTTTCTTGAGCCAGGATTGTGTGCTTCTATGCTCACATA
ATAGTTTCATGTCGATCGTGAAGTTAAACGGTTGCACATATATATGATTTTCTTGGTGTTTGGTTTACTTGCAGGGGATT
GCTGACGATGGTGGAATCAGAGTGCACAGGGGCGGGGTCCAACACGACGGAGCGAGTACCGTGGGCCAAGCAGCTGAGCG
GCAAGGAAATCGCTAGATTCGTCAGCTTGTCCTACATCTCTCCCGATGGCTGGCTCGACGCGCAGCCACGCTAGCAAATC
CAGCAG------CCTAGTTAGCATTGCGTAGGAAGTTTACCACGATCATCAGATCATGTGCCGGGACTAG----GATGCA
TGTATCACCCATGAAAACTGATGCACTCTGCGTGTAT-GGAGGTGTTTAATAAAAGATTAAAGGAGATGTTTAATTATCT
CATCATG-AATGGATCTATTACCTTTCTCCCGCTAGTAGAAATCCTCATTTTCCATGCCAGGGAAAATACGAAGGAACAA
CCTGAAAATGGTAATAGAATA-TTTCCTTATGACAATTCAAAGAAAACCCGAGAGGGGAATAACCGAATAAGGAATATTG
ATGGGAAAAGGGGAAAGAAATCCTTTCTTATTGTTTTGTGCATACAAATGTAAGGAATGCATCGATCCCAACAATTTTTA
AAAAG---TAGAACTTTGAACACATGGCTGCTCC-ACGTAAAATATCTTTCTCTACGGCTTCTCTTGCTGGGCTGAAATT
-GTTTCAGGGAAAGGTTGAGTATAAGTGAAGATCATAATAATATTAATTCCTTTCAATCACATTTCAACAACTATTTATG
ATCCAAAGTTCACATATTCACATGCAT-TTGGGCAAAGTCTATGCAAGAGTGACACGGGAACGAGGAATAGGGAGGT-GC
GGACCAGGGAGAGAAAATATGAGAGGAAGGAGACAATAGCTCATCGGTTGAGACCGCCCGTAGGATAACCTCTCGGGC--
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr7D_714
CATAGCAC------------------------------------------------------------------------
--------------------------------------------------------------------------------
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AAGCCGAGAAGCCGCCTAATTACTACCTACATGGCCGCTGCATGGTTCGAGCGCACGTACAAGACGTGAAATGGAAAGAT
ATCACTGTTCACCACGCATGGAAAGATGTGATTCGGAATCAGTCACTTACCAAACCCGGAGCGCCCATCAGTGATTGCCT
GTATCAATACCGGGCTTATTTCTTTCCCAGTTGATTCTATTTTTTGTCGAGCTTCTCACGGTCTCCTTCATTATTTATCA
CCATTAGCCATTTCTTTCTCATCTGTTTAGACTAATAGGTACAG-GACGAAAAGACATGAAGAAGCTCGCACTACGGCGA
CTGCTGGCCGTAGCCATTAGTGTTGTAGCACTCTTCATAGTCTTTACACCCGAGACATCTCACCGCTGCGACGCTGCACA
GGCGGTGGTTAAAAGCGTCTTCGTTGACCATACTGGCCGAGGCGACTTCAAGACTATCCAAGCAGCCATCGACTCCGTTC
CTTTCGGCAACAACCAATGGATCCGAGTCCACGTCGCCGCCGGCACTTACACGTGAGATCTGTGCATCTTTCATTTGTTC
CACATA---TATAAACGTTGTCTCAATAGTAAAATAT----------------------------------------TAA
CAATGAAACCGATTTTGACTATGTTTTTT---------CGTATTCTCGTAATGGATACACGATGAAGTGAGAAAGTGAAT
GTGCCATTTAACAAAAGCTTCATCCTACTGGAAGGCGAGGGGAGGTTGCAGACGTCCATCGAGTGGGCCGATCACGCCGG
CGGGTCGTCCACCACCGCCGACACCCCGACTTTTGCCTCTCATGCCGACGATTTCATGGCCCGCGACATCACGTTCAAGG
TTAATATGTCACCCAATATAATGGTTTTTCTCACCACCGATATGACTGCAAGAAGATTTCAGCCTTAGACGTGAGTTGTC
ATTGTAGAACACATACGAGGGGGCCAACCTGGCGCAAGCGGTGGCTGCCCTAGTTGACGGGGACCGGTCGTCGTTCTATG
GATGCGGCTTCTTCAGTGTTCAGGACACGTTGTGCGATATGGCTGGGAGGCACTACTATGAGAATTGTGTCATCGGCGGC
GCCGTGGACTTCATCTTCGGCAACGCCAGGTCCATCTTCCAGGTGCAAATTAAATCAGGCATGTCTATCAGGTCTCGA--
-----------------------------------------------------------------------CATGTGCGT
TGTCAATGACGGAATTGTGTGTGTGTGTACGCATGCATGTAGGGCTGTGATCTATGGACGGGAAAGTTAACAAAGACGCT
GGGATCCATCACGGCGCATGGGCGAGACAGTGACAAAGACGATACCGCATTTGTGTTCAAGCAGTGCAAGGTCGGCGGCT
TCATGCCGATATACCTGGGACGCCCATGGCGAGACTATGCTAGGGTCATCTTCTACCAGACCAACATGTCTATCGTTGTG
GACCGCCAAGGTTGGGACATCTGGAACTCCAAGGGCAAAGAGTGAGTTTTAAACAAGCGGATCATCGAGAATGGATTTTG
TGCTTCTGAGTGCTC--GCACATTTTACTTTTAAAATATTAAAATGATTTTTATATTCT--AAAAAAAGATAGTATATAT
GGTAGTATATTATACACTTCCGGAATTTCTTAAGAAAAATGGCATTTTTTATATACTTAAAAACCCTGAAAGGAGTCCAT
AGAATAGTACCCTTTTTTTGCGGA-GATAGATTAGTTCCATTT-GTACACTCAGGTTAGTTTCTTCCAAGCGACACAAAG
AACAAGTTTTTT--CTTCTTCACCAAACGTAATGTCTACACGTGCTCCCTCTGTGAACTGTATTAGT-------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------TACTTAGCCATGCGTATG
CATTATTGTTATTTAG---------AAAAGAGAATAAAATATTTTCTTGACCCAGGATTGTGTGCTTCTGTGCTCACATA
ATAGTTTCCTGTCGATCATGTAGTTAAACTGTTGCACATATATATGATTTTCTTGGTGTTTGGTTTACTTGCAGGGGATT
GCTAACGATGGTGGAATCAGAGTGCACAGGGGCGGGGTCCAACACGACGGAGCGAGTACCGTGGGCCAAGCAGCTGAGCG
GCAAGCAAATCGCTAGATTCGTCAACTTGTCCTACATCTCTCCCGATGGCTGGCTCGACGCGCAGCCACGCTAGCAAATC
CAGCAG------GCTAGTTAGCATTGCATAGGAAGTTTACCACGACCATCAGATCATGTGCCGGGACTAGCTACGATGCA
TGTATCACCCATGACAACTGATGCACTCTGCGTGAATGGGAGCTGTTTAATAAAAATATTGAAGGGGTGTTTAATTATCT
CATCATGGAATAGATCAATTACCTTTCTCCCGCTACTAGAAATCCTCATTTTCCATGCCAGGAAAAATAC-AAGGAACAA
CCTGAAAATGGTAATAGAACAATTT-------------------------------------------------------
------AAACAGGAAGGAAATCCTTTCTTATTGTTTTGTGCCTACAAACGTAAGGAATGCTTTGATCCCAACAATTTA-A
AATAGTACTAGAACTTTGACCACATGGCTGCTCCCACATAAAATATCTTTCTCTACGTTTTCTCTTGCTGGGCTGAAAAT
ATTTTCAGGGAAAGATTGAGTATGAATGAAGATCATAATAATATTAATTCCTTTCAATCACATTTCAACAACTATTTGTG
ATTTAAAGGACACATATTCACATGCA------------------------------------------------------
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-------------------------------------------------------------------------
>chr3D_865
--------------------------------------------------------------------------------
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------------------------------------------------------------------ATCAGTGATTGCCC
ATTTCCAAACCGGGCTTATTTCTTTCCCAATTGATTCGATTTTTTGTCGAGCTTCTCACCGTCTGCTTCATTATTTATCA
CCATTAGCCCTTTCTTTCTCATCTCTTTAG---AATAGGTACAA-GACGAAGAAACATGAAGAAGCTCGCACTACTGCAA
CTGCTAGCCGTAGCCATTATAGTTGGAGCACTCCTCACGGCCTTTACACCAGAGACATCTCACCGCTACGACGCGGCGCA
GGCGGTGGCTAAAAGTATCTTCGTCGACCAGACGGGCCGTGGTGACTTCAAGACT--------AGCCATCGACTCCGTCC
CTTTCAGCAACAACCAATGGATCCGAGTCCACGTCGTCGCCGGCACTTACACGTGA--TCTGTGAATC-----TTTTTTT
CACATA---TATAAACGTTGTCTCAAAAAATATAT----TTCATATATACATCATGAGC----GTAGTTGATTGGTATAA
TAATGAAGCAGATTTTGACTATGTGTGTTTTTCTTATTCGTATTCTCATAATGGATACACCATGAAGTGAGAAGGTGACT
GTGCC---------------------------------------------------------------------------
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-------------------------------------------------------------------------
>SNPs
S-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
----------------S--SSSSSSS-----------------------------S---------S--------------
-----S--------------------------------------------------S-----S---------------S-
----------S--S--------------S----S-----SSS--------------------------------------
SS--S---S-----S--S----------------SSSSSSSSS-S-------SS-S-----S------S-----------
------------------------------S----------------------------------------------S--
------------------------------S-----------------------S-------------------------
-------------------------S---------------S-----------------S--------------------
--S-S-SSS-------------------------S--SS------S-S---S----S--SSSS-----------S-----
---------------------------------------S----------------------------------------
-----------------------------------------------------------------------S--S-----
---------------------------S-----------------------------------S----------------
--------------S--------------------S--S------S---S-----------S--------S---S--S--
--------------------------S------------S--------------------------------S-------
----S---------------------------------------------------------------------------
-----------------SS-------------------S---------------------S--S------SS----S-SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--
---SS----S---------SS--SS-------------------S---S----------S--------------------
---------------------------------------S--S-----------------S--S--------S-------
----------------S-----S-------------------------------------------------S-------
------------------------------------------------------------------S-------------
-------------------------------S---------------------S-----------SS-------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
-------------S---------------------------S-S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S------S---------------------------------------------
-------------------------------S----S-------------------------------------------
--------------------S------------------------------------S----------------------
------------------S-------S---------------------------------------------------S-
----S----------S---------------------------------------------S-------SS-----SS--
------SSSSSS----------------S---------------------------------------------------
--S------------------------------------------S-------------------S------------SS
SSSS-------------------------------------------SS-------------S---------------S-
--------------S-SS-SSS--------S-SSS----S--------S-------------SSSS-SSSS-SS------
---------S------S------------S--------------SS----S---------S-------------------
--------------------------------------------S---S----S--------------------------
-------S-----------------------------S------------------------------------------
-------------------S-------S----S---S----S-------------------------SSSS--SS-SS--
-----------------S--S---------------------------------S-----S------S------S---SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_593
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ATCATGGCCAGCTCGTTTCA-----------------------------------------------
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>reverse_1961
--------------------------------------------------------------------------------
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----------------------------------------CCTGGCTCCATTGCATACCA--------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>forward_596
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------ATGGCCAGCTCGTTTCATGA--------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1986
--------------------------------------------------------------------------------
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-----------------------------------------------------------------ACCCAGCATGTGTGT
TGTTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>forward_597
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------TGGCCAGCTCGTTTCATGAT-------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_1987
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CCCAGCATGTGTGT
TGTTGA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_746
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AGAAGCCGCCCAACATTACA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2183
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TCCATGGCGAGACTATGCTAG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_1980
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CCTGGCTCCATTGCATACCA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_3488
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GCTTTCCATGCCAGGCAAAA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
