>input_sequence_40501
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--ATGTATCACCAACATCAGGGCCCTAGTGAGCTCTTCACTACTAGGACGACCTTTCCCATGGAGAGGCATCTGTTTCTG
CACGGAGGAAGTACGCAAGGAGATTCCGGGCTAGTTCTCTCAACCGATGCAAAACCAAGGCTGAAATGGACACCCGAGTT
ACATCAGCGATTTGTAGATGCGGTCAATCAATTGGGCGGAGCAGAAAGTTAGTATACGTCTATACGATTCTTATCTACTC
ATTGTACAGAAGTCCGCTGAATTCTTACACTCATATGTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTAT
GGGCATTCCAGGACTCACCTTGTATCATCTGAAAAGCCACCTTCAGGTACATGATAATCATAAATTCTCATGTTAAAAAT
GGCACCCATAACTGCAGTCAAGTCAGAATTTCTTTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGT
TAACGTTGGGACAAACAAGAACAGTAAGCCCAAGTTTAACTTCTATAGTTCTATCTTTACCATTATAATAAAACTGTATA
ATGACACACAGGCCATGAAATTTTGCAGCCATAGGATGTGCAATTGTAGCTGATGGCATGCCCGGAACAAGTGTGCCAGC
GATGATCAATACAAATGTCATTCCACAGCCAGAGAAGTAAGGAAACTGG-CATGCAATTCAAAATTGTATTTCATGTGAA
TATTGAAGTACTAATCTCTCTTACTGGGTGACAGAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAG
AGACAATTAAACGAACAACTCGAGGTGAGGTACTGAAACTAGTTGTGTAATAAGCTCTTAACCGAGACAATTCATTAGAT
GCACACAGTAGATGGAAATCAAGATAACCTGAATCGAGCATCCAGCTACCACTCTCGTGCCGACCAAAGAAAAAACTGAT
AATGTATTCTAAATCCTTATTTGACCTCTTTGAACGCTGCGCTTCCTCCAGGGATGGCCCCATAAAACGAATATAATCTA
GCAATTAAAGAACCAAAAGAGAGAAAAAGCAATTTGGCACCACTCACTAAATTCGGATGCTTAATACCTTCTTCTAATGT
AGCAACGAACTTTTGTCAAATTCCAGCTAAGTAACACACCATGCATGCAGTGACTACAACATATCCATCAGTACAGTGGT
TCTAACCTGAAATTAAATTGGCAACAGGTACAACGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGC
AGTTCTAGAGCAGGCACAAGAGAGCCTTGGAAAACAGAATTTGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATAT
CAGAACTAGTCTCACAAGTATCAAACGAATGTTTCAGCAATGCAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGA
CTAGAGCCAAGGCAAATCCAGTTCATGGAAAGTTCAACCAACAACTGTTTGACTGCAGCCGGAGGATTCATTAATGAGCA
TAGACTACACAGCCATGGAATGCTCAAAGCATATGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCGTGAGT
ACCAGTTTTCCCTTAATAGAAGCCTAAGCGAGCGTAAGATGGGTCATTTGCACAATGTGAATGAGTACCACAAAGCAGAG
TTTGGAAGTGAAAGTGACATGGAGATTCAACAGGAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCACCAGTTC
AGCCTCAGGAAGCAAAGAAAGAGATGCGGACAGACTATATCTTGAAGAACCAAACTGCAAGAGACAATTGGTTGAACATT
CAGGTTTTGAGCATCCAAGTTCTGGGAAGAAACTTGATCTGAACACTCAAAACACTGATGATGGTGATCACGGGTATAGG
CATTTTGATTTAAATGGCTTCAGCTGGAGCTGA-----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>chr1B_1_TraesCS1B01G316200
GCTTATCCCATGTAAAGAGCATAAGCCAGTAGGTCCATACTTTTCTGGACTACAATGAGAATATGTACCAATCTCAGGAA
AGGACACTGATGGAACTTGTGCTTGTTCATATTCTATCCACTTTACAGTAGTACAAAGGACAGAATAAATTGACAGAAAA
ATTGTGTTTCTGCACGTAAGATGTCACTCTCCAAGAAGGCAACAAGTATCAGCAATAAAAAAAATAACTTAATTGATTCA
TTTAAACAAAGATACACATACTGTATTCCTCTAAGAACATTAAAATCATTGATCACATAACATGAACCAGCAACACTAAA
CTAAGTACTTAGTAACT---AAGGTAACAGAGAAGTTGCACAAATATTTCCATCTCGGCAAAATGAGTGATTCGGAAATG
TATCTTTCACGCTCCAAGCAG--ATAGCAGATAATATGCCAAAAAATAACATTTCAGAAAGATAAATTGCTCCAGTTGTA
GGTATTTATTA------------------------------------TGTACATATACCTTCTACTGATCTAATGAGTAA
AATATGCAGCTGAAGTTTCCATACAGAAATGCAGAGAAAGCTAAAGGACTAGTTTCATTACTGAGGGGGTACAAGGTTGA
TGTTACTCAGCTGTCACAGGTTGCTATTAGTACTGATA-TTTTCATTTTGGTTATTATTACCAAGAATAACTAAGGACAG
CATCTTCTGTCAGTTGGGTTAAAGATTGTTCTTCTGCTGTTTGTTCTAAGATGCTAGATTCTATGTTTCCCCATATAAGG
AGCCCCTCACAGGGCATTGCTTACCAACCTGAGAAGACCAAAAGGGTATCAACAGGCTTAAGCTCACACGGAGAACAGGA
CTGGTATTCATCTTGTCAGTAGGGAAATACTCAATACACAGTTTCAACGTGCAACAGCAAAGAGGAAGGAAGCGACTGCA
GAACAAGTAAGAAGTTGGTTTGATCTTTCTGCCCTCCACATTTCTGTTGTTCTAACAATTTCTGTCCATTCTACAGCAGA
AGATGTATCACCAACATCAGGGCCCTAGTGAGCTCTTCACTACTAGGACGACCTTTCCCATGGAGAGGCATCTGTTTCTG
CACGGAGGAAGTACGCAAGGAGATTCCGGGCTAGTTCTCTCAACCGATGCAAAACCAAGGCTGAAATGGACACCCGAGTT
ACATCAGCGATTTGTAGATGCGGTCAATCAATTGGGCGGAGCAGAAAGTTAGTATACGTCTATACGATTCTTATCTACTC
ATTGTACAGAAGTCCGCTGAATTCTTACACTCATATGTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTAT
GGGCATTCCAGGACTCACCTTGTATCATCTGAAAAGCCACCTTCAGGTACATGATAATCATAAATTCTCATGTTAAAAAT
GGCACCCATAACTGCAGTCAAGTCAGAATTTCTTTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGT
TAACGTTGGGACAAACAAGAACAGTAAGCCCAAGTTTAACTTCTATAGTTCTATCTTTACCATTATAATAAAACTGTATA
ATGACACACAGGCCATGAAATTTTGCAGCCATAGGATGTGCAATTGTAGCTGATGGCATGCCCGGAACAAGTGTGCCAGC
GATGATCAATACAAATGTCATTCCACAGCCAGAGAAGTAAGGAAACTGG-CATGCAATTCAAAATTGTATTTCATGTGAA
TATTGAAGTACTAATCTCTCTTACTGGGTGACAGAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAG
AGACAATTAAACGAACAACTCGAGGTGAGGTACTGAAACTAGTTGTGTAATAAGCTCTTAACCGAGACAATTCATTAGAT
GCACACAGTAGATGGAAATCAAGATAACCTGAATCGAGCATCCAGCTACCACTCTCGTGCCGACCAAAGAAAAAACTGAT
AATGTATTCTAAATCCTTATTTGACCTCTTTGAACGCTGCGCTTCCTCCAGGGATGGCCCCATAAAACGAATATAATCTA
GCAATTAAAGAACCAAAAGAGAGAAAAAGCAATTTGGCACCACTCACTAAATTCGGATGCTTAATACCTTCTTCTAATGT
AGCAACGAACTTTTGTCAAATTCCAGCTAAGTAACACACCATGCATGCAGTGACTACAACATATCCATCAGTACAGTGGT
TCTAACCTGAAATTAAATTGGCAACAGGTACAACGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGC
AGTTCTAGAGCAGGCACAAGAGAGCCTTGGAAAACAGAATTTGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATAT
CAGAACTAGTCTCACAAGTATCAAACGAATGTTTCAGCAATGCAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGA
CTAGAGCCAAGGCAAATCCAGTTCATGGAAAGTTCAACCAACAACTGTTTGACTGCAGCCGGAGGATTCATTAATGAGCA
TAGACTACACAGCCATGGAATGCTCAAAGCATATGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCGTGAGT
ACCAGTTTTCCCTTAATAGAAGCCTAAGCGAGCGTAAGATGGGTCATTTGCACAATGTGAATGAGTACCACAAAGCAGAG
TTTGGAAGTGAAAGTGACATGGAGATTCAACAGGAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCACCAGTTC
AGCCTCAGGAAGCAAAGAAAGAGATGCGGACAGACTATATCTTGAAGAACCAAACTGCAAGAGACAATTGGTTGAACATT
CAGGTTTTGAGCATCCAAGTTCTGGGAAGAAACTTGATCTGAACACTCAAAACACTGATGATGGTGATCACGGGTATAGG
CATTTTGATTTAAATGGCTTCAGCTGGAGCTGAATTGTTAATGATATGCAATATGATTGAAGCGAAGAAATGAGCATACA
AATAATTTTTCCTGGCATTTTCAACACCATTATTTGGTGATTAAACTGCGTAGGTCAAGAAAA-AATACTAGTACACCAG
AGTTCAACCATTGAGTATAGAAACTGAGATGTTATGGCTCAGCAGTTTAAATCTCCATTTCGAGAGGTGTAATACATATG
AATAGGATATCAAGTCCGTAATAATAAAAAAGGGAATAGGGATGCAATATAGGAACAGAATGCAGAAGGCAAAGATAGCT
AGAGAACCACCAACCGAGTAAGCGTCACACTTAATACAGGTAAACCATGGTGAGAAATACTCATCCATGTA-ATAGTATA
ATTTCTCGGAATTTAAGTAGTAAGAATAGCAGGGACTACCAGAACCTTACCCTCCCAAATAACATGGTTAAATCAATTTA
GTAACAGAAGCTATCCC--------------GACTTTCAGCTCAACACAGCTTAAAAGTTAAAACAAAACCGAACAGTTC
ATCAATTGATGCACACTTCACGAACACAACTAATATCTCAGAGAAGCGTGTGTAGAATAAAGATGGAAGTAATTCGTCCG
CAGTCATCTGTGCACATCATTCAACCAGCATATAAAGTGATGTATCTGTTCGTCCACACAACATAAACGAGTTTTGAAGT
AAAGTACATCGCAGCACTTATTTGTATAC------CATCAGCATCAGGCAAGGCAAGAGTCACTTATTGCATA---ATTC
AATTAAAAACTGCAAATGAAAGAGCAAAGCTATGTATAATCTTGGGGTGTGATGTGCATCACAAGTGATATAAGAAGACA
TGCATCTATTCCTTTGTTCCTCTCCTTATTCTCAACTATACTTGCCACAAGTGCAAGAGCACTGTATTATAGAGTACTAT
ATGTGATAACTAGAAAACTACTGTAGTTTATTATGGAGAGCAGTAAGCGCTGGTGTCATCCACTCA--------TGCTGC
TACTACTACTTCTTGATCCGGCGCAC
>chr1D_1
GCTTATGCCATGTAAAGAGCATAAGCCAGTAGGTCCACACTTTTCTGGACTACAATGAGAATATGTACCAATCTCAGGAA
AGGACACTGATGGAACTTGTGCTTGTTCATATTCTATCCACTTTACAGTAGTACAAAGGACAGAATAAATTGACAGAAAA
ATTGTGTTTTTGTGTGAAT--TGTCACTCTCCAAGAAGGCAACAAGTATCAGCAATGAAAAAAATAACTTAATTGATTCA
TTTAAACAAAGATACACATACTGCATTCCTCTAAGAACATTAAAATCATTAATCACGTAACATGAACCAGCAACACTAAA
CTAAA----TAGTAACT---AAGGTAACAGAGAAGTTGCGCAAATATTTCCATCTCGGCAAAATGAGTGATTCGGAAAGG
TATCTTTCATGCTCCAAGCAG--ATAGCAGATAATATGCCAAAAAATAACATTTTAGAAAGATAAATTGCTCCAGTTGTA
GGTATTTATTCTGTAAGATAAATTGCTCCAGTTGTAGGTATTTATTCTGTACACATACCTTCTACTGATCTAATGAGTAA
AATATGCAGCTGAAGTTTCCATACAGAAATGCAGAGAAAGCTAAAGGGCAAGTTTCATTACTGAGGGG-TACAAGGTTGA
TGTTACTCAGCTGTCACAGGTTGCTATTAGTACTGATATTTTTTATTTTGGTTATTATTTCCAAGAATAACTAAGGACAG
CATCTTCTGTCAGTTGGGTTAAAGATTGTTCTTCTGCTGCTTGTTCTAAGATGCTAGATTCTATGTTTCCCCATATAAGG
AGCCCCTCACAGGGCATTCCTTATCAACCTGAGAAGACCAAAAGGATATCAACAGGCTTAAGCTCACACGGAGAACAAGA
CTGGTATTCGTCTTGTCAGTAGGGAAATACTCAATACACAGTTTCAACGTGCAACAGCAAAGAGGAAGGAAGCGACTGCA
GAACAAGTAAGAAGTTGGTTAGATCTTTCAGCCCTCCACATTTCTGTTGTTCTAAAAATTTCTGTCCATTCTACAGCAGA
AGATGTATCACCAACATCAGGGCCCTAGTGAGCTCTTCACTACTAGGACAACCTTTCCTATGGAGAGGCATCTGTTTCTG
CACGGAGGAAGTACGCAAGGAGATTCCGGGCTAGTTCTCTCAACCGATGCAAAACCAAGGCTCAAATGGACACCCGAGTT
ACATCAGCGATTTGTAGATGCGGTCAATCAATTGGGTGGAGCAGAGAGTTAGTATACATCTATATGATTCTTATCTACTC
ATTGTACAGAAGTCCGCTGAATTCTTACACTCAT--GTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTAT
GGGCATTCCAGGACTCACCTTGTATCATCTGAAAAGCCACCTCCAGGTACATGATAATCATAAATTCTCATGTTAAAAAT
GGCGCCCATAACTGCAGTCAAGTCAGAATTTCTTTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGT
TAACGTCGGGACAAACAAGAACAGTAAGCCCAAGTTTAACTTCTATAGTTCCATCTTTACCATTATAATATATCTGTATA
ATAACACACAGGCCATGAAATTTTGCAGCCATAGGATGTGCAATTGCAGCTGATGGCATGCCCGGAACAAGTGTGCCAGC
GATGATCAATACAAATGTCATTCCACAGCCAGAGAAGTAAGGAAACTGGCCATGCAATTCAGAATTGTATTTCATGTGAA
TATTGAAGTACTAATCTCTCTTAATGGGTGACAGAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAG
AGACAATTAAACGAACAACTCGAGGTGAGGTACTGAAACTAATTGTGTAATAAGCTCTTAACCAAGACAATTCATTAGAT
GCACACAGTAGATGGAAATCAAGATAAC-TGAATCAAGCATCCAGCTACCACTCTCGTGCCAACCAAATAAAAAACTGAT
AATGTATTCTAAATCCTTATTTGACACCTTTGAACGCTGCGCTTCCTTCAGGGATGGCCCCATAAAAGGAATACAGTCTA
GCAATTAAAGAACCAAAAGAGCGAAAAAGCAATTTGGCATCACTCATTAAATTCAGATGCTTAATACCTTCTTCTAATGT
AGCAATGAACTTTTGTCAAATTCCAGCTAAGTAACACACCATGCATGCAGTGACTAAAACATATCCATCAGTGCAGTGGT
TCTAACCTGAAATTAAATTGGCAACAGGTACAACGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGC
AGTTCTAGAGCAGGCACAAGAGAGCCTTGGAAAACAGAATTCGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATAT
CAGAACTAGTCTCACAAGTATCAAATGAATGTTTCGGCAGTGCAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGA
CTAGAGCCAAGGCAAATCCAGTTCATGGAAAGTTCAACCAATAACTGTTTGACTGCAGCCGGAGGATTCATCAATGAGCA
TAGACTACACAGCCATGGAATGCTCAAAGCATATGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCATGAGT
ATCAGTTTTCCCTTAATAGAAGCCTAAGCGAGCGTAAGATGGGTCATTTGCACAATGTGAATGAGTACCACAAAGCAGAG
TTTGGAAGTGAAAGTGACATGGAGATTCAACAGGAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCGCCAGTTC
GGCCTCAGGAAGCAAAGAAAGAGATGCAGACAGACTATATCTTGAAGAACCAAACTGCAAGAGACAAGCGGTTGAACATT
CAGGTTTTGAGCATCCAAGTTCTGGGAAGAAACTTGATCTGAACACTCAAAACACTGACGATGGTGATCAAGGGTATAGG
CATTTTGATTTAAATGGCTTCAGCTGGAGCTGAATTGTTAATGATATGCAATATGATTGAAGAGAAGAAATGATCATACA
AATAATTTTTCCTGGCATTTTCAACACCATTATTTGGTGATTAAACTGCGTAGGTGAAGAAAAAAATACTAGTACACCAG
AGTTCAACCATTGAGTATAGAAACTGAGATGTTATGGCTCAGCAGTTTAAATCTCCATTTCGAGAGGTGTAATACATATG
AATAGGATATCAAATCCGTA-TAATAAAAAAAGGAATAGGGATGCAATATAGGAATAGAATGCAGAAGGCAAAGATAGCT
AGAGAACCACCAATCGAGTAAGCGCCACACTTAATACAGGTAAACCATGGTGAGAAATACTCATCCATGTATATAATACA
ATTTCTCGGAATTTAAGCAGTAAGAATAGCAGGGACTACCAGAACCTTACCCTCCCAAATAACACCGTTAAATCAATTTA
GTAACAGAAGCTATCCCTGCCATTATGGGGAGACTTTCAGCTCAACACGGC-------TTAAAACAAAACCAAACAGTTC
ATCAATTGATGCAGACTTCATGAAAACAACTACCATCTCAG------------AGAATAAAGATGGAAGTAATTCGTCCG
CAGTCATCTCTGCACATCGTTCAACCAGCATATAAACTGAGGTATCTATTCATCCACACAACACAAACAATTTTTGAGGG
TAAGTCCATCGCAGTACTTGTTTGTATAT------CA------ACAGGCAAGGCAAGAGTCACTTATTGCATATTT----
AATTAAAAACTGGAAATGAAAGAGCAAAGCTATGTATAATCTTGGGGTGTGATGTGCATCACAAGTGATATAAGAAGACA
TGTATCTATTCCTTTGTTCCTCTCCTTATTCTCAACTATACTTGCCACAAGAGCAAGAGCACTGTATTATAGAGTATGC-
--A--ATAACTAGAAAACTA-----GTTTATTATGGAGAGCAGTGAGCGCTGGTGTCTGTCATCCACTCATAGCTGCTAC
CACTACTACTTCTTGATCCGGCGCAC
>chr1A_1
GCTTATCCCATGTAAAGAGCATAAGCCAGTAGGTCCATACTTTTCTGGACTACAATGAGAATATGTACCAATCTCAGGAA
AGGACACTGATGGAACTTGTGCTTGTTCATATTCTATCCACTTTACAGTAGTACAAAGGACAGAATAAATTGACAGAAAA
ATTGTGCTTCTGTGTGTAAGATGTCACTCTCCAAGAAGGCAACAAGTATCAGCAATGAAAAAAA-AACTTAATTGATTCA
TTTAAACAAAGATGCACATACTGCATTCCTCTAAGAGCATTAAAATCATTAATCACATAACATGAACCAGCAACACTAAA
CTAAA----TACTAGTAACGAAGGTAACAGAGAAGTTGCACAAATATTTCCATCTCGGCAAAATGAGTGATTCGGAAAGG
TATCTTTCACGCTCCAAGCAGATATAGCAGATAATATGCCAAAAAATAACATTCCAGAAAGAC-----------------
-------------------AAATTGCTCCAGTTGTAGGTATTTATTCTGTACATATACCTTCTACTGATCTAATGAGTAA
A-TATGCAGCTGAAGTTTCCATACAGAAATGCAGAGAAAGCTAAAGGACTAGTTTCATTACTGAGGGG-TACAAGGTTGA
TGTTACTCAGCTGTCACAGGTTGCTATTAGTACTGATATTTTG-ATTTTGGTTATTATTTCCAAGAATAACTGAGGACAG
CATCTTCTGTCAGTTGGGTTAAAGATTGTTCTTCTGCTGTTTGTTCTAAGATGCTAGATTCTATGTTTCCCCATATAAGG
AGCCCCTCACAGGGCATTCCTTATCAACCTGAGAAGACCAAAAGGGTATCAACAGGCTTAAGCTCACACGGAGAACAAGA
CTGGTATTCGTCTTGTCAGTAGGGAAATACTCAATACACAGTTTCAACGTGCAACAGCAAAGAGGAAGGAAGCGACTGCA
GAACAAGTAAGAAGTTGGTTAGATCTTTAAGCCCTCCAAATTTCTGTTGTTCTAAAAATTTCTGTCCATTCTACAGCAGA
AGATGTATCACCAACATCAGGGCCCTAGTGAGCTCTTCACTACTAGGACGACCTTTCCCATGGAGAGGCATCTGTTTCTG
CACGGAGGAAGTACGCAAGGAGATTCTGGGCTAGTTCTCTCAACCGATGCAAAACCAAGGCTCAAATGGACACCCGAGTT
ACATCAGCGATTTGTAGACGCGGTCAATCAATTGGGTGGAGCAGAGAGTTAGTATACATCTATATGTTTCTTATCTACTC
ATTGTACAGAAGTCCGCTGAATTCTTACACTCAT--GTTTATCACGCAGAAGCTACTCCAAAAACAGTCATGAGGCTTAT
GGGCATTCCAGGACTCACCTTGTATCATCTGAAAAGCCACCTCCAGGTACATGATAATCATAAATTCTCATGTTAAAAAT
GGCGCCCATAACTGCAGTCAAGTCAGAATTTCTTTGATGTTTCAGAAATACAGGCTCAGTAAGAACCTCCAAGCTCAAGT
TAACGTCGGGACAAACAAGAACAGTAAGCCCAAGTTTAACTTCTATAGTTCCATCTTTACCATTATAATATATCTGTATA
ATGACACACAGGCCATGAAATTTTGCAGCCATAGGATGTGCAATTGCAGCTGATGGCATGCCCGGAACAAGTGTGCCAGA
GATGATCAATACAAATGCCATTCCACAGCCAGAGAAGTAAGGAAACTGGCCATGCAATTCAGAATTGTATTTCATGTGAA
TA-TGAAGTACTAATCTCTCTTACTGGGTGACAGAACTATGCAAATTGGTGAAGCCCTACAGATGCAAATCGAGGTGCAG
AGACAATTAAACGAACAACTTGAGGTGAGGTACTGAAACTACTTGTGTAATAAGCTCTTAACCAAGACAATTCATTAGAT
GCACACAGTAGATGGAAATCAAGATAACCTGAATCCTTATTTG-------------------------------ACTGAT
AATGTATTCTAAATCCTTATTTGACACCTTTGAACGCTGCGCTTCCTCCAGGGATGGCCCCATAAAACGAATACAGTCTA
GCAATTAAAGAACCAAAAGAGCGAAAAAGCAATTTGGCACCACTCATTAAATTCAGATGCTTAATACCTTCTTCTAATGT
AGCAATGAAC-TTTGTCAAATTCCAGCTAAGTAACAGACCATGCATGGAGTGACTAAAACATATCCATCAGTGCAGTGGT
TCTAACCTGAAATTAAATTGGCAACAGGTACAACGGCATCTGCAACTACGGATAGAAGCCCAAGGGAAGTATCTGCAGGC
AGTTCTAGAGCAGGCACAAGAGAGCCTTGGAAAACAGAATTCGGGTCCTGCAAACCTGGAAGATGCAAAGATGAAAATAT
CAGAACTAGTCTCACAAGTATCAAATGAATGTTTCGGCAGTGGAGTTACAGAGATAAAAGAAAGTTCAAGTATGCACAGA
CTAGAGCCGAGGCAAATCCAGTTCATGGAAAGTTCAACCAATAACTGTTTGACTGCAGCCGGAGGATTCATCAATGAGCA
TAGACTACACAGCCATGGAATGCTCAAAGCATATGATGATAGTTCAATATTTTGCAGAAAGCACTCTCCTGACCATGAGT
ATCAGTTTTCCCTTAATAGAAGCCTAAGCGAGCGTAAGATGGGTCATTTGCAAAATGTGAATGAGTACCACAAAGCAGAG
TTTGGAAGTGAAAGTGACATGGAGATTCAACAGGAATATACTACACCTCAAAAGAATGGCAGAGGCAGCACCGCCAGTTC
GGCCTCAGGAAGCAAAGAAAGAGATGCAGACAGACTATATCTTGAAGAAGCAAACTGCAAGAGACAAGCGGTTGAACATT
CCGGTTTTGAGCATCCAAGTTCTGGGAAGAAAATTGATCTGAACACTCAAAACACTGATGATGGTGATCAAGGGTATAGG
CATTTTGATTTAAATGGCTTCAGCTGGAGCTGAATTGTTAATGATATGCAATATGATTGAAGAGAAGAAATGAGCATACA
AATAATTTTTCCTGGCATTTTGAACACCATTATTTGGTGATTAAACTGTGTAGGTTAAGAAAAAAATACTAGTACACCAG
AGTTCAACCATTGAGTATAGAAACTGAGATGTTATAGCTCAGCAGTTTAAATCTCTATTTCGAGAGGTTTAATACATATG
AATAGGATATCAAATCTGTA-TAATAAAAAAAGGAATAGGGATGAAATATAGGAATAGAATGCAGAAGGCAAAGATAGCT
AGAGAACCACCAACCGAGTAAGCGTCACACTTAATACAGGTAAACCATGGTGAGAAATACTCATCCATGTATATAATACA
ATTTCTCGGAATTTAAGCAGTAAGAATAGCAGGGACTACCAGAACCTTACCCTACCAAATAACACCGTTAAATCAATTTA
GTAACAGAAGCTATCCCTGCCATTATGCGGATACTTTCAGCTCAACACAGC-------TTAAAACAAAACCAAACAGTTT
ATCGATTGATGCAGACTTCACGAACACAACTGACATCTCAGAGAAGCATGTGTAGAATAAAGATGGAAGTAATTCGTCCG
CAGTCATCTCTGCACATCGTTCAACCAGCATATAAACTGATGCATCTATTCATCCACACAACGCAAACGATTTTTGAGGT
AAAGTCCATCGCAGCACTTATTTGCATACGATCAGCA------TCAGGCAAGGCAAGAGTCATTTATAGCATAATAATTC
GATTAAAAACTGCAAATGGAAGAGCAAAGCTATGTATAATCTTGGGGGGTGATGTGCATCACAAGTCATATAAGAAGACA
TGTATCTATTCCTTTGTTCCTCTCCTTATTCTCATCTATACTTGCCACAAGAGCAAGAGCACTGTATTATAGAGTATGGA
ATA--ATAACTAGAAAACTA-----GTTTATTATGGAGAGCAGTGAGCGCCGG----TGTCATCCACTCATCGCTGCTAC
TACTACTACTTCTTGATCCGGCGCAC
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------SSS-----------------------------------------S-----------------------
-----------------------S--------------------------S-----------------------------
----SSSSS---------------------------------------------------------------------S-
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-------------------------------------------S---------------S--------------------
--------------------------------------------------------------------------------
------------------S----S-----------------------------------------------------S--
---------S----------------------------------------------------------------------
--------------------S--------S-------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
------------------------------------S--------S-----------S------S---------------
----------------------------------SS--------------------------------------------
------------------------------------------S-------------------------------------
---S----------------------------------------------------------------------------
------S--------------------------------------------S------------------S-S-------
----------------------------------------------S---------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
-----------------------------------------S---------------------S----------------
-----------------------------------S-------------------------S------S-----------
-------------------------SS----------------------------------------------S-S----
---------------------S------------------------S-------S-------------------------
-----S--------------------------------------------------S---------------S-------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-------------------------S---------S---S----------------------------------------
-----------------------------------------S-----------------------------S--------
--------------------------------------------------------------------------S-----
-S------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
S--------------------------S---------------------------------------SS-----------
----------------------------------------------------------------------S---------
--------------------------------------------------------------S-----------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-------------S------S----------S-----------------------S------------------------
---------------------------------------------------------------------------S--S-
-----------------S----------------------------------------------SS--------------
---------------------------------------------------SSSSSSS-------------S--------
-------------S-------------------S-------------S--------------------------------
---------S--------S-----------------S----------S---S-----------S------S------S--
-----S-------------------------------SSSSSS-------------------------------------
--------------------------------------------------------------------------------
--S------------------------------------------------S------------------------SSSS
--SSS---------------SSSSS-------------------S------------SSS--SS--------------S-
--------------------------
>forward_824
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CCTCACAGGGCATTGCTTAC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_2522
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------CAACTGTTTGACTGCAGCCG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_1183
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CCGATGCAAAACCAAGGCTG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_2793
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------ACCAGTTC
AGCCTCAGGAAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_1237
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------ATGCGGTCAATCAATTGGGC-------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_2801
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
AGCCTCAGGAAGCAAAGAAAGA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_2635
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------AGAAAGCACTCTCCTGACCG-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_3720
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AGCATCAGGCAAGGCAAGAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
