>input_sequence_40487
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------ATGTCG
AGGAACCCGGCCTGCAGCGTCTACGTAGGTGAGCCCCCTTCGCTTCGCGCTCCCCTCCTGCC------------------
-----------------CG---------------------------GATTGAACTAGACGCGTGCCCTAATTTCGAGGGG
TTTGGTCGATGCGCGTCTCGGTGGTCGATTGATTAGTCGCGGTAGGGTTATAGTGCGTGCGGGGAGAAGTACAGATTAGA
ACGGTGCAATTGCGAATCATCCCCTTTTGGGCTTTCGGGCTTGTTTAGTGGCTGCTATGTACTAGT----ACAATGTTAT
CCTGTTGCCACCGGTTAGTATGAGTAGTATTTGTTTTTCTTCTATGAGGGTGTCATCTACTCCCTCCGTTCGAAATATAA
GATGTTTTAGCTTTATTCTAAATTGAATGTATCTAGACGTGTTTCAGTGTGTAGATTCAATCATTTTAGTTCGTATCTAG
TCCATATTGAAATATCCAAGACATCTTATATTTTTGGTACTTGTGGTTGTCGTTTGTTTCATGTCAGCATGTGATGGATA
TATAGCTCTAATTTGCCGGCCAAATGATTCCTGATGTTTCAGTTTT-GTAACTCGATATAGACTGCTTAATGATAGAGCC
ATGACACTGCCGTCTGTAGGTTGAGTTTGCTAGTTATGTTGGTTGATAAG-AAAAACAGTAAACAACTTCAAAGATTTGT
TTTATGTTGCTGTAATGTGCTTTGGCCTTGCCTGGTAACTGCAAGCAGTACAGTGTAATCATCATTAATGGTTGTGTTTT
GGACAAAGGGCATTTCAAATTTTACACATGTATTTGGGGAATTACCTGACATGGAGACGAATTGACTCTTCCATTACTTG
GAATAATCA------CATAGCTGGGTCTGTTTGAGTAGCGCTCTTCTATCACTGTCTAGTTATCATTGTCACTTTTGTAG
GTTGTTACACTCTGT-TGCTATTCTGAGACATCA--------CTGTATGCATATGGTGTTCTCTCCGGGCAATCCTAGTG
TTTGGTCCTTTTTATATCATTTATGTAACATCCCTGTACACATTTTCAT----TCTGTTGTATTACTTCAGCAATGTTTT
GTGTTGTATTAATTTTATGACCTGTTTTTGTCAACAGGCAACTTGGATGAGAAGGTGCCTGAAAGAGTCTTGTATGAGAT
TCTTATTCAGGCAGGTCATGTAGTAGACCTATACATACCATGTGACAAAGAAACTGAGCGCCCTAAAGGTTTTGCTTTTG
CTGAGTATGAGACAGAGGCAATTGCTCAGTATGCTGTTAAACTTTTTTCAGGACTTGTTAGGCTTAATGGTAAAACACTT
AAATTTGCGGTATGTTTCTTCTTTTGTAATCTTCAAAAAAGATATGTTATGTCTGAACTATCATTACCTTGCAAATTATT
TCTGGTTATAAATTGCAGTTTGCCTAGTTGGAGCACAGTAATTGTTGCC----CTTCTTATAACCGTGTATACATATGTG
TGTTTTGTGCTAATATAAACAAGGTCAAATCCCTAAATTCGTATTAATTTTGACAGCTTTCTGGACAAGACAAGCCCTCA
TCAAATGGCAATAATCCAGTAATGCCTAAACTCAACCCTGTACCATTACCAAAGCAGCCTCAGTTTGTGCATTCTAGTGA
TACGCTTGTGTCGCATAAACCAGCATATCCGGTGGTAAATGGTGGGATTCCACATAATGGCTTTTCACAAGGCTATCATC
CTTACAATGTTCACCCTCAAGGTGAGGCTATTTCCTAGGTCTATTTATACATATTCCAGA--ATACGTGACTTAAATCTT
ACCTTGTTCTATTGTTTTCTCTTTTCACCAGCATTACCACCTCGACCGGTGCATGAGCACCGAGAATTTGTACATGGTAC
GTATGGTTACAACAGTCATGCATATGGTTCTGTTCTGAATGCTAGCTACGGAGGTTATGTTGTGAATGCTGTTGGTCATG
GAGCTATGAGGCAACCAATCATTTACCCATCCTACTAG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr3B_1_TraesCS3B01G419000
GACGGTTGCCAAACATGGCCACCGACATTAGCATAGATTAACAATTAATTAACCTATTAATTAATTCCTAACAAATGATA
ATGATTTGTAGTGTCCATTGCAACAGTTCCATGTCGACCACCCTATATATAGGACTATTATTAGCAAGCA-------TTT
TTTTCATGTCGGCCATGCTGAACCAACATCATCAAAAGTCTGAAAAAAAATTTAGAAAAATATACACACCAATGTTAAGT
CCATCTATAACTTGAAGCCTGGTGAGTTGGTTTCATCACAAAGTACCTAACCATCTGACGGTTCGGTGTCAAGCCTAAAT
GATAATGTTTTTCATTGTCCATTGCGATACTTGTACTATTTCCATGCCGACCACCCTGATAGAGTAAATTT-ATTTCCTC
AATCAAGATTATCATCAACCAC-TCTATACTCTACGGGTGGTTGGCTTCAGGATTGCCGACGAGGCATGGCCCGTCATTA
GTGCTAGTA----CTTG--TAGTATAGTG---CCATGGCCTTGTCGACATGCAGCTGGACGGTACGGCGTCAACTGAGAC
GTGATGTGGCCGACATACACGTCAGAGTTTGGTTCGGCGGGTACTCTCGCGTGCACGCCACGCGCGTCGGCCAATCGCAG
GCCTCCGCGTGGCCCCTGCCACGTAGTCCACATACCCCGGAGTCTACCGCGTATCCGTCTCTTCCTCTTCAGCTGTCGAC
CTTAGCCACTGGCAGGTGG-CCCCGGGCACGCCTTTCCTCGTCGGTCTTGAA-TCGGAGACCGAGCCGGTTTCCGAATCT
CGAGGCGGCGCCAGACAAATAGCCACCGCCCAACGGCCCAG--------GCGAACCGGCCCGACTAGAGAGACCCTGCGT
CCTCCATCCTGCGCCGCAATTCGCCCAAGCGACTTCGCGCGACTCCTTTCGCTTCCTCCTCCTCCTCC---GGATTGCGG
CGCGACGGTGGCCGTGAGCGCGCGGTGCTCCTA---CTCCTCCTCCACGGCCTTGCGCCCAGATCCGGGCCCCAATGTCG
AGGAACCCGGCCTGCAGCGTCTACGTAGGTGAGCCCCCTTCGCTTCGCGCTCCCCTCCTGCC------------------
-----------------CG---------------------------GATTGAACTAGACGCGTGCCCTAATTTCGAGGGG
TTTGGTCGATGCGCGTCTCGGTGGTCGATTGATTAGTCGCGGTAGGGTTATAGTGCGTGCGGGGAGAAGTACAGATTAGA
ACGGTGCAATTGCGAATCATCCCCTTTTGGGCTTTCGGGCTTGTTTAGTGGCTGCTATGTACTAGT----ACAATGTTAT
CCTGTTGCCACCGGTTAGTATGAGTAGTATTTGTTTTTCTTCTATGAGGGTGTCATCTACTCCCTCCGTTCGAAATATAA
GATGTTTTAGCTTTATTCTAAATTGAATGTATCTAGACGTGTTTCAGTGTGTAGATTCAATCATTTTAGTTCGTATCTAG
TCCATATTGAAATATCCAAGACATCTTATATTTTTGGTACTTGTGGTTGTCGTTTGTTTCATGTCAGCATGTGATGGATA
TATAGCTCTAATTTGCCGGCCAAATGATTCCTGATGTTTCAGTTTT-GTAACTCGATATAGACTGCTTAATGATAGAGCC
ATGACACTGCCGTCTGTAGGTTGAGTTTGCTAGTTATGTTGGTTGATAAG-AAAAACAGTAAACAACTTCAAAGATTTGT
TTTATGTTGCTGTAATGTGCTTTGGCCTTGCCTGGTAACTGCAAGCAGTACAGTGTAATCATCATTAATGGTTGTGTTTT
GGACAAAGGGCATTTCAAATTTTACACATGTATTTGGGGAATTACCTGACATGGAGACGAATTGACTCTTCCATTACTTG
GAATAATCA------CATAGCTGGGTCTGTTTGAGTAGCGCTCTTCTATCACTGTCTAGTTATCATTGTCACTTTTGTAG
GTTGTTACACTCTGT-TGCTATTCTGAGACATCA--------CTGTATGCATATGGTGTTCTCTCCGGGCAATCCTAGTG
TTTGGTCCTTTTTATATCATTTATGTAACATCCCTGTACACATTTTCAT----TCTGTTGTATTACTTCAGCAATGTTTT
GTGTTGTATTAATTTTATGACCTGTTTTTGTCAACAGGCAACTTGGATGAGAAGGTGCCTGAAAGAGTCTTGTATGAGAT
TCTTATTCAGGCAGGTCATGTAGTAGACCTATACATACCATGTGACAAAGAAACTGAGCGCCCTAAAGGTTTTGCTTTTG
CTGAGTATGAGACAGAGGCAATTGCTCAGTATGCTGTTAAACTTTTTTCAGGACTTGTTAGGCTTAATGGTAAAACACTT
AAATTTGCGGTATGTTTCTTCTTTTGTAATCTTCAAAAAAGATATGTTATGTCTGAACTATCATTACCTTGCAAATTATT
TCTGGTTATAAATTGCAGTTTGCCTAGTTGGAGCACAGTAATTGTTGCC----CTTCTTATAACCGTGTATACATATGTG
TGTTTTGTGCTAATATAAACAAGGTCAAATCCCTAAATTCGTATTAATTTTGACAGCTTTCTGGACAAGACAAGCCCTCA
TCAAATGGCAATAATCCAGTAATGCCTAAACTCAACCCTGTACCATTACCAAAGCAGCCTCAGTTTGTGCATTCTAGTGA
TACGCTTGTGTCGCATAAACCAGCATATCCGGTGGTAAATGGTGGGATTCCACATAATGGCTTTTCACAAGGCTATCATC
CTTACAATGTTCACCCTCAAGGTGAGGCTATTTCCTAGGTCTATTTATACATATTCCAGA--ATACGTGACTTAAATCTT
ACCTTGTTCTATTGTTTTCTCTTTTCACCAGCATTACCACCTCGACCGGTGCATGAGCACCGAGAATTTGTACATGGTAC
GTATGGTTACAACAGTCATGCATATGGTTCTGTTCTGAATGCTAGCTACGGAGGTTATGTTGTGAATGCTGTTGGTCATG
GAGCTATGAGGCAACCAATCATTTACCCATCCTACTAGGTTGTAGTCACCAAAGAGCGGGAGCGGGTATGCAAAGTATGC
AGGTTAAATGTAGCTTCTTAGTTCCTTGAATTCTCAGTAGCATCTTGTTTGTACCCTTGCACTTCATTTCCATGCATGTA
AATAGGGCTGGTATATCCATTATATCAACAGTAAGTTGGCAACGGAAGGCTCTGCCCAGTACATTGTACACCCTTTGTAC
TTGTCTAGAAGATAGACTGCTAGATCTGTTCT----C------TTGGAAAATAAAGAAATGCAATAGCTTGGGCTGTT--
GCAACCCTGCCGACTCATGTATTAATGATCATATGCGTGGATGATTTGAGTTATTCCTAAAGTGCCTTGTCGTGTACTCG
AATGATCATTGCTGTTACGTACCCAGAAGATGTTGATATCTCAGCTCCGGGGTCCCATATAATCATAAGTTCAAGTAAAC
TGTCCTGTGTTTGTGTCCCTATCT---ATCACAGAATTTAACC-CCATCAGGGACAACTAAATTTCTGGAATGCAATAGC
ACCCACCAATCCTGCT--------------------------------TTGTTTGTGATTTCTGTGCTTAGGTGTCATTG
CTTGGCTGGTATATCCGATTTGTTTTATTGACGGTAAATTGGCAACTGAAGACTCTGCCCAGTACATCTCCTAGCTTTTC
TTTAATCCTTGTCTAACAGATAGCCTGGTACATCTTTTCCTTTCCT------GGGAAATCAAAGAAATGCAACATTGCTG
GCCGTTTTCATGGCATCTGGCTC-GTGGATTAATGATCATATCCATGGATGATCTGAGTTATTATTCTTAAAGCTCCTTG
TTGTGCACTCGAATGATCATTGCTCTTACCCAGATTTCACAGCTCTGGAGCCACATATAATTATGAAGTCAAGTAACT--
TCCTGTGTTTGTGGCCCTGCCTATC-ACACAATTGAATCCCCATCAGGGACAACTAAGTTTCTGGAATGTAGGCTTACCC
ACCAACCCTATATTGTTATTGTATTA------------------------------------------------------
-----------------------------TATATACTTGGCTCAATAGCTTCGTTGTTT
>chr3A_75
--------------------------------------------------------------------------ATGATA
ATGATTTGTAGTGTCCATTGCAACAGTTTCATGTCGACCACCC----TATAGGATTATTATTAGCAAGTACTGTCCTTTT
TTTTCATGCCGACCATACTGAACAAACATCGTTAAAAGTCTG-AAATAAATTTTAAAAAATATATACATCAATGAGAACT
TGCATT------------CTTGTGAGCTGGTTTCACCGGAAAGTACCTAATCATCCGAGGGCTTAGTGTCAGGCCTAAAT
GATAATGTCTTTCATTGTCCATTGCGACACTTGTACTATTTCCATGCCGACCACCCTGAAAGGAGC-ATTATTTTTTCTC
AAACAAGATTATCATCAACCAC-TCTGTACTCTACGGGTGGTTGGCTTCAGGATTGCCGATGAGGCATGGCGCGTCATTA
GTGCTAGGTATACCTGTACTAGTATAGTG---TCATCGCCTTGTCGACATGCAGCTGGACGGTACGACGTCAACCGAAAC
GTGATGTGGCCGACATACACGTCACAGTTTGGTTCGGCCGGTACTCTCGCGTGCACGACACGCGCGCCGGCCAATCGCAG
GCTTCCGCGTGG-CCCTGCCACGTAGTCCACATACCCCGGTGTCTACCGCGTATCCGTCTCTTCCTCTTCGGCTGTCGAC
TCGGGCCA----------------GGGCACGCCTTTCCTCGTCGGTCTTGGAGTCGGAGACCGAGCCGATTCCCGAATCT
CGAGGCGGCGCCAGACAAATAGCCACCGCCCAACGGCCCAG------GTGCGAACCGGCCCGACTAGAGAGACCCTGCGT
CCTCCTTCCTGCGCCGCAATTCGCCCGAGCGACTTCGCGCGACTCCTTTCGCTCCCTCCTCCTCCTCC---GGATTGCGG
CGCGACGGCGGCCGTGAGCGCGCGGTGCTCCTCCTCCTCCTCCTCCACGCCCTCGCGCCCAGATCCGGCCCCCAATGGCG
AGGAACCCGGCCTGCAGCGTCTACGTAGGTGAGCCCCCTTCGCGTCGCGCTCCCCTCCTGCGGTCCTGCCCGCGTAACCG
CCGCGTCCCGTTTGGTTCG---------------------------GATTGAATTAGATGCGTGCCCTAATTTCTAGGGG
TTTGGTCGATGTGCGTCTCGGTGGTCGATTGATTAGTCGCGCTAGGGTTATAGTGCGTGCGGGGAGAAGTGTAGATTAGA
ACGGTGCAATTGCGATTCATCCCCTTTTGCGCTTTCAGGCTTGTTTAGTGCCTGCTATGTATGAAGTATCACAATGTTAT
CCTGGTGCCACCGGTTGGTATTAGTAAAACAA----TTCTTCTGTGAGGGTGTTATCTGTTGTT----------------
--------------------------------------------------------------------------------
------------------------------------GTACTTGTGGTTGTCGTTTGTTACATGTCAGCATGCGATGGTTA
TATAGTTCTAATTTGCCGGCCAAATGATTCCTGGT----------------------------------------GAGCC
ATGACACTGCCATCTGTAGGTCGAG-TTGCTAGTTATGTTGGTTGATAAAAAAAAACAGTAAACAACCTCGAAGGTTTGT
TTCATGTTGCTGCAGTGTGCTCTGCAGGCATTG-----------------CAGTATAATTATCCTTAATGGTTGTGTTTT
GGACAAAGAGCATTTCGAGTTTTGCACATGTATTTGGGGAATTACCTGACATGGAGACAAATTGACTCTTGCATTACCTG
GAATAATAATC---GCATAGCTGGGTCTGTTTGGGTAGCGCTCTTTTATCACTGTCTAGTTTTCTCGGTCACTTTCATAG
GTTGTTACACTCTGTTTGCTGTTCTGAGGCATCACTGATTCACTGTATGCATATGGTGTTCTCTCTGGGCAATCCTAGTG
TTCGGTCCTTTTTCTATGATTTATGTAACATCCCTGTACACATCTTACTACAGTCTGTTGTATTACTTAAGCAATGTTTT
GTGTTGTATTAATTCTATGACCTGTTTTTCTCAACAGGCAACTTGGATGAGAAGGTCCCTGAAAGAGTCTTGTATGAGAT
TCTTATTCAGGCCGGTCATGTAGTAGACCTACACATACCATGTGACAAAGAAACTGGGCGTCCCAAAGGTTTTGCTTTTG
CTGAGTATGAGACAGAGGCAGTTGCTCAGTATGCTGTTAGACTTTTTTCAGGACTTGTTAGGCTTAATGGTAAAACACTT
AAATTTGCGGTATGTTTCTTCTTTTGTGATCTTCAATATAGATATGCTACATCTGTACGATCATTACCTTGCAAATTAAC
ACTGGTTACAAATTGCAACTTGA----TTGGAACACACTAATTGTTGCCCTTACTTCTTATAACCGTGTATACATATGTG
TGTTTTGTATTAATATAAGCAAGGTCTAATCCCTAAATTCGTATCAATTTTGACAGCTTTCCGGACAAGACAAGCCGTCA
TCAAATGGCAATAATCCAGTAATGCCTAAACTCAACCCTATACCATTACCAAAGCAGCCTCAGTTTGTGCATTCTAGTGA
TACACTTGTGTCGCATAAACCAGCATATCCGGTGGTAAATGGTGGGATTCCACATAATGGTTTTTCACAAGGCTATCATC
CTTACAATGTTCACCCTCAAGGTGAGGCTATTTCCTAGGTCTGTTTATACATATTCCAGG--ATACATGACTTGATCTCA
T-TGTGTTCTATTGTTTTCTCCTTTCACCAGCATTACCACCTCGACCCGTGCATGGGCACCGAGAGTTTGTCCATGGTAC
GTATGGTTACAACAGTCATGTATATGGTTCTGTTCTGAATGCTAGCTATGGAGGTTATGTTGTGAATGCTGTTGGTCATG
GAGCTATGAGGCAACCAATTATTTACCCATCCTACTAGGCAGTAGGCACCAAAGAGCGGGAGCGGGTATAAAAAGTATGC
AGGTTAAATGTAGCTTCTTAGTTCCTTGAATTCTCAGTAGCATCTTGTTTGTACCCTTGCACTTCATTTCCATGCATGTA
TATAGGGCTGGTATATCCGTTTTATCAACAGTAAGTTGGCAACGGAAGGCTCTGCCCAGTACATTGTACACCCTTTGTAC
TTGTCTAGAAGATAGCCTGCTAGATCTGTTCTCTTCC------TTGGAAAATAAAGAAATGCAATAGCGGGGGCTGTT--
GCACCCCTGCTGACTCACGTATTAATGATCATATGCGTGGATGATTTGAGTTATTCCTAAAGTGCCTTGCTATGTACTCG
AATGATCATTGCTGTTACTTACCCAGCAGATGTTGATGTCTCGGCTCCGAGGCCCCATATAATCATAAGTTCAAGTAAAC
TGTCCTATGTTTGTGTCCCTGCCTATCATCACAGAATTTAACCTCCATCAGGGACAACTAAATTTCTGGAATGCAATAGC
ACCTTG----------------TTGTATTACTTGGCTCTATAGCTTTGTTGTTTGTGATTTCTGTGCTTAGGTGTCATTG
CTTGGCTGGTATATCC-----GTTTTATCGACGGTAAATTGGCAACTGAAGGCTCTGCCCAGTACATCTCCTTCCTTTTC
TTTAATCCCTGTCTAACAGATAGCTTGGTAGATCTTTTCTTTTCCT------GGG-AATCAAAGAAATGCAACATTGCTG
GCCGTTTTCATGGCCTCTGGCTC-GCGGATTAATGATCATATCAATGGATGATTTGAGTTATTATTCTTAAAGCTCCTTG
TTGTGCACTCGAATGATCATTGCTCTTGCCCAGATTTCTCAGCTCTGGAGCCACGTATAATTATGAAGTCAAGTAACT--
TCCTGTGTTTGTGGCCCTGCTTATCAACACAGTTGAATCCCCATCATGGACAACTAAGTTTCTGGAATGTAGGCTTACCC
ACCAACCCTATATTGTTATTGTATTATACTCCCTCCGTTCCAAATTACTCGTCGTGGTTTTAGTTCAATTTGAACTAAAA
CCACGACGAGTAATTTGAAACGGAGGGAGTATATACTTGGCTCAATAGCTTCGTTGTTT
>chr3D_302
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TCATGCTTAAAT
GATAATGTTTTTCATTGTCCATTGCGACACTTGTACTATTTCCATGCCGACCACCCTGAAAGGAGT-ATTA-TTTTTCTC
GAACAAGATTATCATCAACCACTTCTATACTCTACGGGTGGTTGGCTTCAGGATTGCCGATGAGGCATGGCGCGTCATTA
GAGCTAGTATATACTTG--TAGTGTAGTGCCATCATGGCCTTGTCGACATGCAGCTGGACGGTACGACGTCCACTGAGAC
GTGATGTGGCCGACATACACGTCAGAGTTTGGTTCGGCGGGTGCTCCCGCGTGCACGCCACGCGCGTCGGCCAATCGCAG
GCCTCCGCGTGG-CCCTGCCACGTAGTCCACATACCCCGGAGTCTACCGCGTATCCGTCTCTTCCTCTTCGGCTGTCGAC
TCCGGTCACTGGCAGGTGGTCCCCGGGCACGCCTTTCCTCGTCGGCCTAGGAGTCGGAGACCGAGCCGGTTTCCGAATCT
CGAGGCGGCACCAGACAAATAGCCACCGCCCCACGGCCCAGGTCCAGGTGCGAACCGGCCCGACGCACGAGACCCTGCGT
CCTCCGTCCTGCGCCGCAATTCGCCCGGGCGACTTCGCGCGACTCCTTTCGCCTCCTCCTCCTCCTCCTCTGGATTGCGG
CGCGACGGCGGCCGTGAGCGAGCGGTGCTCCTA---CTCCTCCTCCACGCCCTCGCGCCCAGATCCGCTCCCCAATGGCG
CGGAACCCGGCCTCCAGCGTCTACGTAGGTGAGCCCCCTTCGCCTCGCGCTCCCCTCCTGCC------------------
-----------------CGCGTAACCGCCGCGTCCCGTTTGGTTAGGATTGGATTAGATGCGTGCCCTAATTTCGAGGGG
TCTGGTCGATGTGCGCCCCGGTGGTCGGTTGATTAGTAGCGCTAGGGAGGGTTATGGTGCGGGGAGAAGTGTAGATTAGA
CCGGTGCACTTGCGATTCATCCCCTCTTGGGCTTTCCGGCTTGTTTAGTGGTTGCT--------------ACGATGTTAT
CCTGGTGCCACCGGTTACTATTAATA----TTTCTTTTATTCTGTGAGTTTGTTATTTGTTC------------------
--------------------------------------------------------------------------------
----------------------------------TGGTACTTGTGGTTGTCGTTTGTTTCATGTCAGCATGCGATGGATA
TATAGTTCTAATTTGCCGGCCAAATGATTCCTGATGTTTCAGTTTTTGTAACTCGATATAGACTGCTTAATGATAGAGCC
ATGGCACTGTCATCTGTAGGTTGAG-TTGCTAGTTATGTTGGTTGATGAA--------------AACTTCAAAGATTTGT
TTCATGTTGCTGCAATGTGCTTTGGCTTTGCCTGGTAACTGCAAGCAGTACAGTATAATCATCAGTAATGGTTGTGTTTT
GCACAAAGAACATTTCCAATTTTACACATGTATTTGGGGGATTGCCTGACATGCAGACAAACTGACTCTTCCATTACTTG
GAATAATAATAATTGCATAGCTGGGTCTGTTTTTCTAGCGCTCTTCTATCACTGTCTAGTTTTCTCGTTCACTTTCGTAG
GTTGTTACACTCTGT-TGCTGTTCTGAGACATCA--------CTGTATGCATATCGCGTTCTCTCTGGGCAATCCTTGTG
TTTGGTCCTTTTTCTATGATTTATGTAACATCCCTGTACACATCTTCAT----TTTGTTGTCTTACTTCAGCAGTGTTTT
GTGTTGTATTAATTTTGTGACCTGTTTTTCTCAACAGGCAACTTGGATGAGAAGGTGCCTGAAAGAGTCTTGTATGAGAT
TCTTATTCAGGCTGGTCATGTAGTAGACCTGCACATACCATGTGACAAAGAAACTGGGCGTCCCAAAGGTTTTGCTTTTG
CTGAGTATGAGACAGACGCAATTGCTCAGTATGCTGTTAGACTTTTTTCAGGACTTGTTAGGCTTAATGGTAAAACACTT
AAATTTGCGGTATGTTTCTTCTTTTGTAATCTTCAATATAGATATGTTACGTCTGTACGATCATTACCTTACAAATTAAC
ACTGGTTATAAATTGCAATTTGCCTAGTTGGTGCACAGTAATTGTTGCCCTTACTTCTTATAACCATGTA----------
-------------------CAAGGTCAAATCCCTAAATTTGTGTTCATTTTGACAGCTTTCTGGACAAGACAAGCCCTCA
TCAAATGGCAATAATCCAGTAATGCCTAAACTCAACCCTATACCATTACCAAAGCAGCCTCAGTTTGTGCATTCTAGTGA
TACGCTTGTGTCGCATAAACCAGCATATCCGGTGGTAAATGGTGGGATTCCACATAATGTTTTTTCACAAGGCTATCATC
CTTACAATGTTCACCCTCAAGGTGAGGCTATTTCCTAGGTCTGTTTATACATATTCCAGGATATACATGAATTAATCTCA
T-CTTGTTCTATGGTTTTCTCTTTTCACCAGCATTACCAACTCGACCCGTGCATGAGCACCGAGAGTTTGTCCATGGTAC
GTATGGTTACAACAGTCATGTATATGGTTCTGTTCTGAATGCTAGCTATGGAGGTTATGTTGTGAATGCTGTTGGTCATC
GAGCTGTGAGGCAACCAATCATTTACCCATCCTACTAGGTTGTAGGCACCAAATTGCGGGATCTGGTATTCAGAGTAGGC
AGGTTAATCGTAGCTTCTTGGTCCCTCAAATTCTCAGTAGCATCTTTGTTGTACCCTTGTACTTCAATTCCCTGCATGTA
AATAGGGCTGGTATATCCATTTTATCAACGGTAAGTTGGCAACGGAAAGCTCTGCCCACTACATTGTACA-CCTTTGTAC
TTGTCTAG-------CCTGGTACATCTTTTCTCTTTCTTGGAATTGGAAAATAAAGAAATGCAACATCGTGGGCTGTTTT
GCACCCCCACTGACTC----------------------GGATTATTTGAGCTATTCCTAAAGCTCCTTTTCATGTACTCG
AATGATCATTGCTGTTACTTACACAGAAGATGTTGATGTCTCAGCTCCGGGGCCTCATATAATTATAAATTCAAGTAAAC
TGTCCTGTGTTTGTGCCCTGC-CT---ATCACAGAATTGAACCTCCATCAGGGACAACTAAGTTTCTGGAATGCAAGAGT
ACCCACCAATCCTATTTTGTTATTGTATTACTTGGCTGTATAGCTTTTTTGTTTGTGATTTCTGTGCTTAGGTGTCATTG
CTTGGCTGGTATATCC-----ATTTTATCGACGGTAAATTGGCAACTGAAGGCTCTGCCCAGTACTCCTACATTGTACAC
TCTG-TCTTTGTCTAGAAGATAACCTGGTGCATCTTTTCTCTTCTCTTCCTGGGA-AATTAAAGAAATGCAACAGTGTGG
GCCGTTTCGCACCTACTCTGACTAGTGGATTAATGATCATATCCATGGATGATTTGAGTTATTATTCTTAAAACTACTTG
TTGTGTACTCGAAAGATCATTGCTAGATG-------TCTCAGCTCCAGGGCCTCATATAATTATAAATTCAAGTAAACTG
TCATGTGTTTGTGTCCCTGCCTATC-ACACAATTGAATCCCCATCAGGGACAACTAAGTTTATCTAATGCAGGCTTACCC
CCCAACCCTATATTGTTATTGTATTACTTA--------------------------------------------------
------------------------------------TTGTCTCAATAACTTCCTTGTTT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
----------------------------S--------------SSSS-------S-------------S-----------
--------S--S----S------S------S-S---------S---S------SS---------S---S-----SS--S-
SSSSS-SSSSSSSSSSSS--S-----S--------S-SS-----------S----S--S--S-SS------S--------
---------------------------S-------------------------------S--SSSSS---S-S---S---
--S---------------------------------------------------------S----------S--------
--------------------------------S---------------------------------S-------------
--------------------------------------------------------------------------------
------------S---------------------------------------------------------S---------
SSSS----------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
-----S--------------------S-----------------------------------------------------
--------S----------------------------------------S---S--------------S--------S--
-------------------------------------------S------------------------------------
-----------------------------------------------------S----S---------------------
-----------S-----------------------------S----------------------------SS--------
---------------S--------------------S------------------------SS-SS--------------
----S----------------S----SS-S--SS---------S---------S----SS--SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------S--------
-----S--------------------------------------------------------------------------
-----------S-------------S-----------------------S------------------------------
--S---------S-------------S---------------------------S-------------------------
--------S-------S-----------------------------------------S---------------------
-------S-------------------------S---------------------------S--SSS--------S----
--------------------S--------------------------------------------S--------------
-------------S---S-------------------------S------------------------------------
-----------------------------S--------------------------------------------------
------------S------------------S------------------------S---S--S----------------
---------------------------------------S----------------------------------------
------------------------------------S-S----------S-----S--S-------------------SS
S----------------S--------------------------------------------------------------
--------SS--------S-------------------------------------------------------------
---------------------------------------S----------------------------------------
------------------------------------------------------------S-------------------
------------------------------------------S----------------S------S--------SSSSS
SS---------------------------------------------S-----------------S-----S--------
--------------------S---------------------------S-------------------------------
---------------------------------------------S-----------------------S----------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
---------------S----------------------------------------------------S-----------
---S------S------S-----------------------------------------------------S--------
------------------S------------------S--------------S---------------------------
--------------------SS----------------------------------------------------------
-------------SS-----------------------------------------------------------------
----------------SSSSS-------S----------------------S--------------------SS------
---------------------------------------S---------------S------------------------
-----------------------------------------------------S--------------------------
---------------------------S----------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_34
--------------ATGGCCACCGACATTAGCAT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_1317
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GGGCTTGTTTAGTGGCTGCT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_722
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TCCTCTTCAGCTGTCGAC
CT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_2297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AGCGCCCTAAAGGTTTTGCT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_1692
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATAGAGCC
ATGACACTGCCG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_3732
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------ACTCTGCCCAGTACATCTCCT--------
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