>input_sequence_40423
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-------------------------------------------------------------------------TTTCCTT
CTCATCTCTAGCCTGCGCCGCCGCCTCCACCGCACCCCCCAAAACCCTAGCGCTCGCTTCGCCCCGCCCCACCACCATGG
CCGGCGCGCAGGAGTCCCTCGTGTACGCCGGTGTGATGCGCGGCCACAACGACGTGGTCACGGCCATCGCGACGCCCATC
GACAACTCGCCCTTCATCGTCTCCTCCTCCCGCGACAAGTCGCTGCTCGTCTGGGACCTCACCAACCCCATCCAGGCCAC
CCAGGACTC------CAGCTCCGAGTACGGCGTCCCCTTCCGCCGCCTCACCGGACACGGCCACTTTGTCCAGGACGTCG
TCCTCAGCTCCGACGGCCAGTTCGCGCTCTCCGGATCCTGGGACGGCGAGCTCCGCCTCTGGGACCTCTCCACCGGGGTC
ACCACCCGCCGCTTCGTCGGCCACGAGAAGGACGTCCTCTCCGTCGCCTTCTCCATTGACAACCGACAGATCGTCTCCGC
TTCCCGCGACCGCACCATCAAGCTGTGGAACACCCTCGGTGAGTGCAAGTACACCATCGGCGGTGACCTTGGAGGTGGCG
AGGGCCACACCGGCTGGGTGTCCTGCGTCCGTTTCTCACCCAACAACTTCGCCCCGACCATCGTCTCGGGCTCATGGGAC
CGCTCTGTCAAGGTCTGGAACCTTACCAACTGCAAGCTCCGCTGCACTCTTGATGGTCATGGCGGCTATGTTAGTGCCGT
TGCAGTCAGCCCAGACGGTTCGCTCTGCGCGTCTGGTGGCAAGGATGGCGTCACCTTGCTGTGGGATTTGACCGAGGGCA
AGAGACTCTACTCGCTGGATGCGGGATCCATTATCAACTCACTTTGCTTCTCGCCCAACCGCTACTGGCTCTGCGCGGCG
ACACAGGATTCCATCAAGATCTGGGATCTTGAGTCAAAGCACATCGTGCAGGACCTTAGGCCCGAGGTCCCTGTCTCCAC
CAAGCAGGTTTATTACCTATTACCACCATCA---CTTATTTCTGTGTTTCTTTGATTGTTTACTATTGGTTAATAT--GT
GAATGTGTTGTTTGTATGACCAGCTTACCCTTGTGGCTATGTAGATCTGTTACATTTTGTGATCTGTATTTATTGTCGTA
CTCTAATTTATGATTTACAACGTGTTAGTTTTATGTTGGAATGATAATTTTAGCATAGGTTTTG-AACATTACCA-GTTA
TTGGTTTTGGTTCAACGCATTATGTAATGCAGCTGAAAGCTTGCATAGTTATGCTATTTTGTTCTTTAAGCTAGAACTGG
TTGACTTAAGTTGCCAAATTGATGAAGAGCTTTAATGCAAGCAGAAAAATAAATAGCAAGTTCACAACCAGTACTTTTTT
TATTCATGGAATATACATGTATGTGCTTGTTCTGTTGGTTATTTTTCATACATTGATATGAAATGTTTT-TGTTCATCTT
CCCTGGTGCCTCCTGCCCATCTATGCTAAGGCTGCAATTGTATTGTCAAGCGAGGTA--TATAGGAAGGAAGCACAG---
----GCATTTGTTCTAATGCATAGCTAAATAGACTGATTCTGTTTTTACAAACTCATTTTAAATTTTGAGAGTTGCTACA
TTAAGTTAAAATCTGTCGTCTGTTGAGTGGCTTCTTAATATGGTTTATACTGTTTGCCCAGATGCTCTACTGCACTTGCT
TGAGCTGGAGCGCGGATGGCAGCACTCTCTACGCTGGTTACACCGATGGAACTATCCGCATCTACAAGATCTCAGGGTTC
AGCTACTCTAGCTAGATTATGTATCTTGTTTTAGTGGCCTCTGTTCTGGTAAAACGGCTGTGGTATCTTCTT-TTTTTGA
CTGTCTTGAGGCGTAATATCTGCCTTGGTACTTCTGCTTAATTTACTATCTGTGTCTTAGCCGCAGTCATGATCTCATGG
ATAATGCATCGTTTGTTGGTTTTGGCTGTTCAATATATTGTCTCGTGAATC-----------------------------
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---------------
>chr3D_1_TraesCS3D01G264000
CACCGCGACGTGGACAGCACAGAGCAGAACGCCGGTT-GATTTGATTCATGGGGCTCTTTCTTCACTGCTTT--------
-------------------------------------TTTCAAAAACAATTGGGATGTCCGATTCGGCTCTACATGATTT
TGCTTGCACCATAGAG-AAAAAAATAAGGACACCACTAACCAGCGAACGTCA-TTTTTAGGCAATCCCAGCGAATGCCCT
TAGGATTGTCAGATCCCAATTGAACGCATGACAGTTACTATGCGCATCGTGACGATTTTTCTGCCAGTTTTCT-------
--ACATGGTAATTGTTGCTCTAGAGCATAACAAATCCCTTAGAACATCATGGCAATTTTATTTGTTTACACATGGCAGTT
CCAGGC--TCGCTGGGAAATCTTAAAAAAATCTTACATCGG-TTTTTTAACATTTCTGAAAAACTAAAGATTTTTTCCAA
GAGGTCC-GGTGAATTAAAGATTTTATATGAATTGTAGTGCAATGAATTTCTTAGGAAAAATTGGTATGTATATAATTCA
ATTGTACCAATCAAATAACCAACATAGGAAAACTCCTTAAGGATT-CTAATTCTTCAAAAATTG---TATGAATATCCTT
TTAATAAAAAATGCCCTTAGTTGATACT--TAGCTGCTAATACTAATATGTCATGACATGATCCTTTTCTTGAATCATCT
TATGCTCGAATTTTCTTGTGGTGGTCAC----------------------------------------------------
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-----------------------------------------------------------CTAAATGTTTCACCCAAGCAA
AAGCATGCAAGCAAAGCATTTCCTGCCCCATGTGGAGGACCAAAGCATTTCTTGCTTTTCCCCCCTGTACCGGTGATTAG
GCCCATGGGGCAGCAAAAG----------AAGCTATAGGCAGGCCATGCGCAAGTGAGACGATCTGCAGCGTTTGCAATG
GGCCTCTTGGGGTGCAGCCCAGAGATCCCTCTCGGTG--CATCGGACGGTCACGATTTCCGCTCAACTGAGCACAAAGTC
CACTAATCCACCAAAACCCTAGCGTCTCACGCCCGCCCCCACTATAAA---CTCCTCCTCCCTCTCCGCCCGCTTTCCTT
CTCATCTCTAGCCTGCGCCGCCGCCTCCACCGCACCCCCCAAAACCCTAGCGCTCGCTTCGCCCCGCCCCACCACCATGG
CCGGCGCGCAGGAGTCCCTCGTGTACGCCGGTGTGATGCGCGGCCACAACGACGTGGTCACGGCCATCGCGACGCCCATC
GACAACTCGCCCTTCATCGTCTCCTCCTCCCGCGACAAGTCGCTGCTCGTCTGGGACCTCACCAACCCCATCCAGGCCAC
CCAGGACTC------CAGCTCCGAGTACGGCGTCCCCTTCCGCCGCCTCACCGGACACGGCCACTTTGTCCAGGACGTCG
TCCTCAGCTCCGACGGCCAGTTCGCGCTCTCCGGATCCTGGGACGGCGAGCTCCGCCTCTGGGACCTCTCCACCGGGGTC
ACCACCCGCCGCTTCGTCGGCCACGAGAAGGACGTCCTCTCCGTCGCCTTCTCCATTGACAACCGACAGATCGTCTCCGC
TTCCCGCGACCGCACCATCAAGCTGTGGAACACCCTCGGTGAGTGCAAGTACACCATCGGCGGTGACCTTGGAGGTGGCG
AGGGCCACACCGGCTGGGTGTCCTGCGTCCGTTTCTCACCCAACAACTTCGCCCCGACCATCGTCTCGGGCTCATGGGAC
CGCTCTGTCAAGGTCTGGAACCTTACCAACTGCAAGCTCCGCTGCACTCTTGATGGTCATGGCGGCTATGTTAGTGCCGT
TGCAGTCAGCCCAGACGGTTCGCTCTGCGCGTCTGGTGGCAAGGATGGCGTCACCTTGCTGTGGGATTTGACCGAGGGCA
AGAGACTCTACTCGCTGGATGCGGGATCCATTATCAACTCACTTTGCTTCTCGCCCAACCGCTACTGGCTCTGCGCGGCG
ACACAGGATTCCATCAAGATCTGGGATCTTGAGTCAAAGCACATCGTGCAGGACCTTAGGCCCGAGGTCCCTGTCTCCAC
CAAGCAGGTTTATTACCTATTACCACCATCA---CTTATTTCTGTGTTTCTTTGATTGTTTACTATTGGTTAATAT--GT
GAATGTGTTGTTTGTATGACCAGCTTACCCTTGTGGCTATGTAGATCTGTTACATTTTGTGATCTGTATTTATTGTCGTA
CTCTAATTTATGATTTACAACGTGTTAGTTTTATGTTGGAATGATAATTTTAGCATAGGTTTTG-AACATTACCA-GTTA
TTGGTTTTGGTTCAACGCATTATGTAATGCAGCTGAAAGCTTGCATAGTTATGCTATTTTGTTCTTTAAGCTAGAACTGG
TTGACTTAAGTTGCCAAATTGATGAAGAGCTTTAATGCAAGCAGAAAAATAAATAGCAAGTTCACAACCAGTACTTTTTT
TATTCATGGAATATACATGTATGTGCTTGTTCTGTTGGTTATTTTTCATACATTGATATGAAATGTTTT-TGTTCATCTT
CCCTGGTGCCTCCTGCCCATCTATGCTAAGGCTGCAATTGTATTGTCAAGCGAGGTA--TATAGGAAGGAAGCACAG---
----GCATTTGTTCTAATGCATAGCTAAATAGACTGATTCTGTTTTTACAAACTCATTTTAAATTTTGAGAGTTGCTACA
TTAAGTTAAAATCTGTCGTCTGTTGAGTGGCTTCTTAATATGGTTTATACTGTTTGCCCAGATGCTCTACTGCACTTGCT
TGAGCTGGAGCGCGGATGGCAGCACTCTCTACGCTGGTTACACCGATGGAACTATCCGCATCTACAAGATCTCAGGGTTC
AGCTACTCTAGCTAGATTATGTATCTTGTTTTAGTGGCCTCTGTTCTGGTAAAACGGCTGTGGTATCTTCTT-TTTTTGA
CTGTCTTGAGGCGTAATATCTGCCTTGGTACTTCTGCTTAATTTACTATCTGTGTCTTAGCCGCAGTCATGATCTCATGG
ATAATGCATCGTTTGTTGGTTTTGGCTGTTCAATATATTGTCTCGTGAATCATGGAATCAGTG--TTGCTGCTTGTTATG
TCGAGGGATTTTCTAAGAATGATGTCAAATGACCTGCAAGTTCCTGTGATCTAACG---TGAGTCGCTGATGCTGTATGA
ACTCTGAATTGCCGCCTGATGTTAATTATGTGGTCGTTGTTGTGCATCCGCTTCTAGTGCTAGGTTCTAGTACCACTCAA
AAGTTTTTGCTTAGCTGTGCGTCAAAAGGAGCGCATCCGATCCGCAACTGC---GTAGAACGCCGCTCTGCTCCACTG-A
GGCCAACTCCGCACGACTGGTGCCGCAGGCACCAGAGCAAATAAATAAA-AACTGAAATAGGCCGCGGCCATGGCGTCTA
AGAATTCATGCCGGCGCACAAAAAACGCACAT--------------------------AGTTCATGTCTCGCAGTCCTAG
CTCATGCCGGCTTACAAAATGTTGTTGCTCTTGGCCGTAGCTCAATCATTTAGCTCGAGCATTGCCTTTTTTGTTTCTTC
TCGAACCAAACCTTTCTCTCACC----------------TTGCTCAACTCCACCGCCATGGTCTC---------------
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-------------CACCTGCGCAATGAAAACATTGGTCGCTTCAATCTCGAGCTTCTTCGTTTGGACGGCTTCCTCAGTC
TCGAGCTTCCTCCTTTTGACGGTCTCCTCCATCTCAAGCTTCTTCATTTGGAAATTGATGTAGACCTTCATTTGCTTCTC
CTTTTTTTT--GCGCTTCCTCTCGTCTCATGCTTTCTTTTGGGTCATCATGCCTTGCA-AGTTTGTTGCAAGGCGAATGA
TGCCGCATCACGCTCCTCGTCCACCTTGGAGTTGGTCTT-CCCTCGGTCGCTTCTCTCCTTCATGCTCAACTACGCCCGC
TGGCCCTCCATTCTTCTTTTGGGTGGCATATTGCTGTTTAAACTTGGGGCAATCTTTGATGGTCGTCCAACAATAGGGGA
GAGTGAATGGTTACCTGCCTGGCACCCCGGAGGAGGACGTCGAGACATGGGAGTCGGAGTAGTTTTATGTAGCCGATGTC
CTTCTTGAAGATCCC
>chr3A_1
CACCGCGACGTGGACAGCACAGAGCAGAACGCCGGTTTGATTTCATTCATGGGGTTCTTTCTTGAGAAAGACGGATCCTT
TCTCCACACTGCCTTATTGAGTCGCAGCCTCGCAGGGTTGCAAAAACAATGGGGATGTCCGATTGGACTCTACATGATTT
TGCTTGCACCATAGAAAAAAAAAATAAGGACACCACTTATCAGCGAACGTCATTTTTTAGGCAATCCCAGCGAATGC---
--GGACTGTCAGATCCCAATTGAACGCATGACAGTTACTGTGCGCAGCGTGATGAATTTTCTGCCAGTTTTCTGTACTAA
GTACATGGTAATTGTCGCTTTAGAGCATAACAAATCCCTTAGGACATCATGACAATTTTATTTGTTTACGCATGGCAATT
CTAGGCGTTCGCTGGGAAAGCTTAAAAAGAAACTTAAGTCAATTCTTTAACATTCCCGGAAAACTAAGGATTTTTTCCAG
GATATCCAGGTGAATTAAAGATTTTATATGAAATGTAGTGCAAAGAATTTCTTAGGACAA-----TATGTATATGATTCA
ATTGTACGAATCAAATAACCAACATAGGAAAACTCCTTAAGGATT-CTAATTCTTAAAAAATTG---TATGAATATCCTT
TTAATAAAAAATCCCCTTAGTTGATAGGAGTAGCTGCTAATACTAATATGTCATGACGCGATCCTTTTCTTGAGTCATCT
TATGCTCGAATTTTCTTGTGGTGGTCAC----------------------------------------------------
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-----------------------------------------------------------CTAAATGTTTCACCCAAGCAA
GAGCATAGAAGCAAAGCATTTCCCGCCCCATGCAGAGGACCAAAGCATTTCTTGCCTTTTCCCTCCGTAGCGATGATTAG
GCCCATGGGGCAGAGAAGAGGAGAATGGTAAGCTATAGGC---CCATGCGCAAGTGAGACGATCTGCAGCGTTTGCAATG
GGCCTCCTGGGGTGCAGCCCAGAGATCCCTCTCGGTGTGCATCGGACGGTCACGATTTCCGCTCAACTGAGCACAAAGTC
CACTAATCCACGAAAACCCTAGCGCCTCACGCCCGCCCCCACTATAAA---CTCCTCCTCCCTCTCCGCCCGCTTTCCTT
CTCATCTCTAGCCTGCGCCGCCGCCTCCACCGCACCCCC-AAAACCCTAGCGCTCGCT-----CCGCCCCACCACCATGG
CCGGAGCGCAGGAGTCCCTCGTGTACGCCGGCGTGATGCGCGGCCACAACGACGTGGTCACGGCCATCGCGACGCCCATC
GACAACTCGCCCTTCATCGTCTCCTCCTCCCGCGACAAGTCGCTGCTCGTCTGGGACCTCACCAACCCCATCCAGGCCAC
CCAGGACTC------CAGCTCCGAGTACGGCGTCCCCTTCCGCCGCCTCACCGGCCACGGCCACTTCGTCCAGGACGTCG
TCCTCAGCTCCGACGGCCAGTTCGCGCTCTCCGGATCCTGGGACGGCGAGCTCCGCCTCTGGGACCTCTCCACCGGGGTC
ACCACCCGCCGCTTCGTCGGCCACGAGAAGGACGTCCTCTCCGTCGCCTTCTCCATTGACAACCGACAGATCGTCTCGGC
GTCCCGCGACCGCACCATCAAGCTCTGGAACACCCTCGGTGAGTGCAAGTACACCATCGGCGGTGACCTCGGAGGCGGCG
AGGGCCACACTGGCTGGGTGTCCTGCGTCCGTTTCTCACCCAACAACTTCGCCCCGACCATCGTCTCGGGCTCATGGGAC
CGCTCCGTCAAGGTCTGGAACCTCACCAACTGCAAGCTCCGCTGCACTCTTGATGGTCATGGTGGCTATGTTAGCGCCGT
CGCGGTCAGCCCAGACGGTTCGCTCTGCGCGTCTGGTGGCAAGGATGGCGTCACCTTGCTGTGGGATTTGACCGAGGGCA
AGAGACTCTACTCGCTGGATGCGGGATCCATTATCAACTCACTTTGCTTCTCGCCCAACCGCTACTGGCTCTGCGCGGCG
ACACAGGATTCCATCAAGATCTGGGATCTTGAGTCAAAGCACATCGTGCAGGACCTTAGGCCCGAGGTCCCTGTCTCCAC
GAAGCAGGTTTATTTCCTATTCCCACTATCACTCCTTATTTCCGTGTTTCTTTGATTGTTTACTATTGGTTAATTT--GT
AAATGTGTTGTTTGTATGACCAGCTTACCCTTGTGGCTATGTAGATCTGTTACATTCTATCATCTGTATTTATTGTGGTA
GTCTAATTTATGATTTGCAACGTATTAGCTTCATGTTGGAATGATGAATTTAGCATAGGTTCTG-AACATTACCA-GTGA
G-GGTTTTGATTCACCGCATTATATAATGCAGCTGAAAGCTTGCATAGTTGTGCTATTTTGTTCTTTAAGCTAGAACTGG
TTGACTTAAGTTGCCAAATTGATAAAGAGCTTTAATGCAGGCATAAAAAGAAATAGCAAGTTCACTACCAGTACTTTTCT
TATTCATGGAATGTACATGGATGTGCTTGTTCTGTTGGTTATTTTTCATACATTGTTATGAAATGTTTTATGTTCATCTT
CCCTGGTGCCGCCTGCCCATCTAACTTAAGGCTGCA-TTGTATTGTCAAGCGAGGTACTTAAAGGAAGCACAGGCACTTG
TTGTGCATTTGTTCTAATGCATAGCTAAATTTACTGGTTCTGTTTTTACGAACTCATTTTAAATTTTGAGAGTTGCTACA
TTAAGTTAAAATCTATCGTCTGTTGGGT-GCTTCTTAATATGCTTCATACTGTTTGCCCAGATGCTCTACTGCACTTGCT
TGAGCTGGAGCGCGGATGCCAGCACTCTCTATGCTGGTTACACCGATGGAACTATCCGCATCTACAAGATCTCGGGGTTC
AGCTACTCTAGCTAGATTATGTATCTTGTTTTAGTGGCCTCTGTTCTGGTAAAACGGCTGTGGTATCTTCTT-TTTTTGA
CTGTCTTGAGGCGTAATATCTGCCTTGGTACTTCTGCTTAATTTACTATCTGTGTCTTAGCCGCAGTCATGATCTCATGG
ATAATGCATCGTTTGTTGGTTTTGGCTGTTCAATATATTGTCTCGTGAATCATGGAACCAGCG--TTGCTGCTTGTTATG
TCGAGGGATTTTCTAAGAATGATGTCAAATGACCTGCAATTTCGTGTGATCTAATAATATGAGTCGCTGATGCTGTATGA
ACTCTGAATTGCCGCCTGATGTTAATTATGTGGCTGTTGTCGTGCTTCCGCTTCTAGTCCCCTAGGTTGCGTTAATT---
--------------------------AGGAGCGCATACGATCCGCAACTGCTATGTAGAACGGCGCGCTGCTCCACTG-A
GGCCAACTCCTCACGACTGCAGCCGCAGGCACCGGAGCAAATAATTAAG-AACTGAAATAGGCCGCGGCCATAGCGTCAA
AGTATTCATCAATAATTTAGC-----------------------------------------------------------
------------------------TTGCCCTTGGCCGTAGCTCAGTCATTTAGCATCG-------C--TTTTGTTTCTTC
TCGAACCAAACCCTTCTCCTTAGTGACGTCTT----------CTCAACTCCAGCGCCATGAGAGTAAAATGCATCAACCG
TCCTTACTTGCTGGCAAGGACCAAAACGGTCCCTAAACTCTGAAACTGATTCCATACGATCCCTAAACTTGACAATACGA
TGTCAATACGGCCCTGCAACTCGTGCAACCAGTCCTGAGCTACGTATGCGCCTACTTCTCGCGTACGCGGCGACGTGCAC
GTCAGCCATGTCAACAAAGAGGGCCCGCGGTCAGAAAATCTGGTCGTCTCCTGGTCAAAGCAAGCCGCAATTCCTAGCTT
CCCCAAATAGCGGTCCACCACGAATGATCCCGCACGATGGGCGATGGGCGGCGCCACCGTGACACATAGTTCCGTCGACG
GCGACGGCAGCAACCTCGGCGCCTATCCACCTCCCGTCGCCGGTGGCTACCAAGTCGCGCCTCCCCCACCCGTCTCCGCC
GGTGGCCCGAGCCGCAGCTTGCTCCTCGGGCGGAGGTGGCGCGGCGGGGAGAGCCCTGTCTCCGCCCAGTGACAGGCCAT
GTGCTCCTCGCGCGGACGCCGTCCATGGATGTCCCGTGGGCACGTGCTGATGGAGATGGTGGCGATTTGATGAAGGCGGA
CGCACTTGTGGCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNATGGGGAAGCGGTGCGGCGTCCTGCCGTGCGAGGTGTGCATGACCCGTGCCCACCGCA
CGACCTGTGGCTGTGTTTCTCAACGCCGGAGAAGTGCACCTCTGTTCTGGAGTCTGCATGAAATTGAAGTGTTGCCGCCG
GCGGATCCAGTTCAGTGGCTGGAGCCGAGCAATTGGCGCGACGTCGGGATCGCTGGGCATCAAGACGACAGTATGTTAAT
TCCAGTTATATGTATATCTTAGAGTACTGAACTTGGCAGTCTGAGCTAGTATTGTTGCACTAGCATTGTTTGCAAATTAT
CTTGTGTTTGTGAACCACATTGTGTTCCAATGGGNNNNNNNNNNGTGAAATTTGCTATCTGGCATATTTATGTGAACTAT
CCCAGACAGCTATATTGTGAACTATCCTTGCACTGAACATGTACCGTAATGATTTTTGACAGTGATAACACATATATGCC
GTGAACTTTTGCACTAAACTCTTGCCAGTACACATATATGAAGTGAACATGTCAAAGCATAAGTGTTGAACCTGAACATT
ACATAGCAGGTTTACAAATTTAGTAGTCTTATGATCAGCACAATGATCATAAACAGAACATAGCCATTACAAGTTCTGCG
CCCGATCATAAGCAGAAACACAAAAGTCATGAAGATCCCCATTTCTGACGACATATTTCTTCTCACCTAAATTCATCAAA
CATGCTAACCCTTCTAGGTTTCTTGAAGCCTAGCCTGGTGACCCTGGTCTGATTGGAAGACGCACCTATTTTCATTGGCT
TCTTTCTCTGGCATGAATCTAACCTTTCCTCCTCTGCCGTTGAACTACTTGTTGTAGTTCGTGTCCTCTTGGTTATTCTG
CATTTCCCAAGCTTGTTGCCTTGCAGCCTCCCCACGAGTGAAAAACGGGCTTTCTTTCCCTGAAACAGAGTATAATTAAG
CAAGTCAGTCGCTCACCAAAAAGAGTGCTTAATCCCCTATGATCAAACATGGCCAGTGCTCAATTCACTTTCAGGAACCC
AATATTCAATGAGCCCTAGCATGATGCGTATGAAATTCCATGAAATCAAACAGCAGACATAGGGGAACTAGAAATCATTA
CTTAATCCATTTGGGAATGACTCGATCTTCACATAAAAGAATAAAACCATGCCACACCTGGATAATTTTGACTTACTGTA
CGTCGGAGCCGCAACCTCAACCAGCCGCCGTATCAAGCACTCATCGGCGCCGCAGAGCACCGTTGGAAGATGCGGCGGCG
AGCTGCTTCGTTCCTCTGCCGTCCCTGGGCCGTTCACGTGCTGGACCTGCCGACGATCATCAGGCGGCCGCCGCTATCCA
AGACTCCAAGGTCGATTACTTCTGGTCTGACAAGAGGAACATGCGACGCGGATGACTGATGAAAGCAGATCCTGGGGGCG
GCGAACGCAAAAACACCCAGGACTGGCAGCGGTTGCCCGCGAACTTGTCTGTAGCTGACCTGGACGTCGCGGCGTACGCG
AGCAGTACGCACATGCGTAGCCGAGGACTGGTCGCACAAGTTCCAGGACCGTACTGACATCGTATTTACAATTTTAGGGA
TCGTATTGGATCAGTTTCAGAGTTTAGGGACCGTTTTGGTCCTTGCCAGCGAGTTCAGGGACGGCTGATGCATTTTACTC
GCGCCATGATCACCACCTTCGCAATGAGAACATTGGTCGCTTCAGTCTCGAGCTTCTTTGTTTAGACGGCCTCCTCAGTC
TCGAGCTTCCTCCTTTTGATGGTCTC---CATCTCGAGCATCTTTGTTTGGAACTCGATGTAGACCTTCATTTGCTTCTC
TTTTCTTGTTGGCGCTTCCTCTCGTCTCGTGCTTTCTTTTGGGTCATCATGCCTTGCAAAGTTTGTTGCAAGGCGAACGA
TGCCGCATCACGCTCCTCGTCCACCTTGGAGTTGGTCTTGCCCTCGGTCGCTTCTCTCCTTCATGCTCAACTACGGCCGT
TGGCCCTCCATTCTTCTTTTGGGCGGCATATTGCTCTTTAAATTTAGGGCAATCTTTGATGGTCGTCTAACAATAGGGGA
GAGTGAATGGTTACATGCCTAGCACCCTGAAGGAGGACGCCGAAACATGGGAGTCGGAGTGGTTTTATGTAGCTGATGTC
CTTTTTGAAGATCCC
>chr3B_383
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------------------------------------------TTTTTTAACATTTCAGAAAAACTAAGAAGTTTTTTCAA
GAGGTCCGAGTGAATTAAAGATTTCCTATGAGTTGTAGTGCAATGAACTCTTTAGGAAAAATTG----GTATATGATTCA
ATTGTACGCATCAAATAACCAACATAGGAAAAATTCTTGAGCTTTGCTAATTCTTTATAATTTGTAATATGAAAATCCTT
AGAATAAAAAATGCCCTTAGTTTCC------AGCTGCTAATACTAATATGTCATG-CATGATCCTTTTCTTGAGTCATCT
TATGCTCGAATTTTCTTGTGGTGGTCACCTAAATGTTGAGTAATGCTAGACCTACGTAGGGATTCTTACGTACTTTACGT
AATTGATGATTTGTCAGTTTTTAATTCGTCATTAGTTGGGGGCACGGTCCACCCTTGAAATCAGGGGGGGGCAGTTTTGA
TTAGCGTTTAGCAAATCACGTAGGTTACGTAAGTGCCGTTCGTAGGTGTAGCATTATTGCTAAATGTTTCACCCAAGCAA
GAGCATAGAAGCAAAGCATTTCCTGCCCCATGCAGAGGGCCAAAGCATTTCTCGCCTTTTCCCTCCGTAGCGATGATTAG
GCCCATGGGGCAGAGAAGAGGAGAATGGTAAGCTATAGGC---CCATGCGCAAGTGAGACGATCTGCAGCTTTTGCAATG
GGCCTCTTTTGCAAT----------------------------GGACGGTCACGATTTCCGCTCAACTGAGCACAAAGCC
CACTAATCCACGAAAACCCTAGCGTCTCACGCCCGCCCCCACTATAAACTCCTCCTCCTCCCTCTCCGCCCGCTTTCCTT
CTCATCTCTAGCCTGCGCCGCCGCCTCCACCGCACCCCCCAAAACCCTAGCGCTCGCTTCGCCCCGCCCCACCACCATGG
CCGGCGCGCAGGAGTCCCTCGTCTACGCCGGTGTGATGCGCGGCCACAACGACGTGGTCACGGCCATCGCGACGCCCATC
GACAACTCGCCCTTCATCGTCTCCTCTTCCCGCGACAAGTCGCTGCTCGTCTGGGACCTCACCAACCCCATCCAGGCCAC
CCAGGACTC------CAGCTCCGAGTACGGCGTCCCCTTCCGCCGCCTCACCGGCCACGGCCACTTTGTCCAGGACGTCG
TCCTCAGCTCCGACGGCCAGTTCGCGCTCTCCGGATCCTGGGACGGCGAGCTCCGCCTCTGGGACCTCTCCACCGGGGTC
ACCACCCGCCGCTTCGTCGGCCACGAGAAGGACGTCCTCTCCGTCGCCTTCTCCATTGACAACCGACAGATCGTCTCCGC
GTCCCGCGACCGCACCATCAAGCTGTGGAACACCCTCGGTGAGTGCAAGTACACCATCGGCGGTGACCTTGGAGGCGGCG
AGGGCCACACCGGCTGGGTGTCCTGCGTCCGTTTCTCGCCCAACAACTTCGCCCCGACCATCGTCTCGGGCTCATGGGAC
CGCTCCGTCAAGGTCTGGAACCTTACCAACTGCAAGCTCCGCTGCACTCTTGATGGTCATGGTGGCTATGTTAGCGCCGT
TGCAGTCAGCCCAGACGGTTCGCTTTGCGCGTCTGGTGGCAAGGATGGCGTCACCTTGCTGTGGGATTTGACCGAGGGCA
AGAGACTCTACTCGCTGGATGCGGGATCCATTATCAACTCACTATGCTTCTCGCCCAACCGCTACTGGCTCTGCGCGGCG
ACACAGGATTCCATCAAGATCTGGGATCTTGAGTCAAAGCACATCGTGCAGGACCTTAGGCCCGAGGTCCCTGTCTCCAC
CAAGCAGGTTTGTTTCCAATTCCCAGTATCACTCCTTATGTCCGTGTTTCTTTGATTGTTTACTATTGGTTAATATATGT
AGATGTGTTGTTCGTATGATCAGCTTACCCTTGTGGCTATGTAGATCTGTTACATTTTGTGATCTGTATTTATTGTGGTA
GTCTAATTTATGATTTACAACGTGTTAATTTCATGTTGTAATGATGATTTTTGCATTGGTTTCTTAACATTACCACGTAA
G-GGTTTTGGTTCACCACATTATATAATGCAGCTGAAAGCTTGCATAGTTATGCTATTTTGTTCTTTAAATTTGAACTGG
TTGACTTAAGTTGCCAA-TTGATAAAGAGCTTTAATGCAAGCATAAGAATAAATAGCA-GTTCACTACCAGTATTTTTCT
TATTCAGGGAATGTACATGGATGTGCTTGTTCTGTTGGTTATTTTTCATACATTGATATGAAATG-TTTTTGTTCATCTT
CCATGGTGCCTCCTGCCCATCTATGTTAAGGCTGCA-TTGTATTGTCAAGTGAGTTA--TATAGGAAGCACAGGTATTTG
GTGTGCATTTGTTCTAATGCATAGCTAAATAGACCGATTCTGTTTTTATGAACT--------------------------
--------------ATCGTCTGTTGAGTGGCTTCTTAATATGGTTCATACTGTTTGCCCAGATGCTCTACTGCACTTGCT
TGAGCTGGAGCGCGGATGGCAGCACTCTGTACGCTGGTTACACCGATGGAACTATCCGCATCTACAAGATCTCGGGGTTC
AGCTACTCTAGCTAGATTATGTATCTTGTTTTAGTGGCCTCTGTTCTGGTAAAACGGCTGTGGTATCTTCTTTTTTTTGA
CTGTCTTGAGGCGTAATATCTGCCTTGGTACTTCTGCTTAATTTACTATCTGTGTCTTAGCCGCAGTCATGATCTCATGG
ATAATGCATCGTTTGTTGGTTTTGGCTGTTCAATATATTGTCAAGTGAATCATGGAACCAGTAAATTGTTGCTTGTTATG
TCGAAGGATTTTCTAAGAATGATGTCGATTGACCTGCAAGATCCTGTGATCTAACG---TGAGTCCCTGATGCTGTATGA
ACTCTGAATTGCCGCCTGATGTTAATTATGTGGTCGTTGTTGTGCATCCGCTT-TAGTGCTAGGTTCTAGTACCACTCAA
AAGATTTTGCTTAGCTGTGCGTTAAAAGGAGCGCATACGATCCGCAACTGC---GTAGAACGCCGCTCTGCTCCACTGGA
GGCCAACTCCGCACGACTGGTGCCT--------GGAGCAAATAAAAAAAAAACTGAAATAGGCCGCGGCCATAGCGGCAA
AGAATTCATGCCGGCTCTCTTCTATAAAGCTACGCCAATAGCGTACCTAAAAAAAGAGAGTTCATGTCTCGCAGTCCTAG
CTCATGCCGACTTACAAAATGATATTGCTCTTGGCAGTAGATCAATCATTTAGCTCGAGCATCCCC--TTCTGCTTCTTC
TTGAATCAAACCCTTCTCTTGAGTGACACCTTGCTCCAATTGCTCAACTCCACCGCCATGAT------------------
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-------------CACCTTCGCAACGAAAACATTGGTTGCTTCAATCTTGAGCTTCTTCGTTTGGATGGCCTCCTCAGTC
TTGAGCTTCCTCCTTTTGACGGTCTCTTTCACCTCGAGCTTCTTCGTTTGGAACTCGACGTAGACCTTCATTTGCTCCTC
TCTTTTTTTTGTCGCTTTCTCTCGCCTCGTGCTTCCTTTTGGGTCATCATGCCTTGCAAAGTTTATTGCAAGGCCAACGA
TGCTGCATCACGCTCCTCGTCCACCTTGGAGTTGGTCTTGCCCTCGGTCGCTTCTCTCCTTCATGCTCAACTACGGCCGC
TGGCCCTTCATTCTTCTTTTGGGCGGCATATTGCTCTTTAAACTTGGGGCAATCTTTGATGGTCGTCCAAAAAGGGGGGA
GAGTGAATGGTTACCTGCCTGGCACCCCGAAGGAGGACGTCGAGACATGGGAGTCGGAGTGGTTTTATATAGTCGATGTC
CTTCTTGAAGATCCC
>chr1A_1122
--------------------------------------------------------------------------------
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----------------------------------GATGCGCGGCCACAACGACGTGGTGACGGCGATCGCCGCGCCGATC
GACAACTCGCCCTACATCGTGTCCGGCTCCCGCGACAAGTCGCTGCTGGTCTGGGACCTCACCAACCCGGTCCAGTCCCT
CGGCGACGGCACCGTCGGCACCGACTACGCCGTGCCCTTCCGCCGCCTCACCGGCCACGGCCACTTCGTCCAGGACGTGG
TCATCAGCTCCGACGGCCAGTTCGCGCTCTCGGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGACCTCTCCACCGGCCTC
ACCACCCGCCGCTTCGTCGGCCACTCCAAGGACGTCATCTCGGTCGCCTTCTCCGTCGACAACCGCCAGATCGTCTCCGC
TTCCCGCGACAACACCATCAAGCTCTGGAACACCCTCGGCGAGTGCAAGTACACCATCGGCGGCGACATGGGCGGCGGCG
AGGGCCACACCGGCTGGGTCTCGTGCGTCAGGTTCTCCCCCAACATCCAGCAGCCCACCATCGTCTCCGGCTCCTGGGAC
AAGACCGTCAAGGTCTGGAACCTCACCAACTGCAAGCTCCGCTCCACCCTCGCCGGCCACGGTGGCTATGTCAATGCCGT
CGCCGTCAGCCCCGATGGCTCGCTCTGCGCCTCCGGCGGCAAGGACGGCGTCACTCTGCTCTGGGACCTGTCCGAGGGGA
AGAGGCTGTACCAGCTGGAAGCCGGCTCCATCATCCATGCGCTCTGCTTCTCGCCCAACCGCTACTGGCTCTGTGCCGCG
ACAGAGGAGTCTGTCAAGATCTGGGACCTCGAGTCCAAGCATGTCGTGCAGGACCTCAAGCCAGAAGTCCAGGTCTCCAA
GAACCAGGT-----------------------------------------------------------------------
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>chr1B_1122
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----------------------------------GATGCGCGGCCACAACGACGTGGTGACGGCGATCGCCGCGCCGATC
GACAACTCGCCCTACATCGTGTCCGGCTCCCGCGACAAGTCGCTGCTGGTCTGGGACCTCACCAACCCGGTGCCGTCCCT
CGGCGACGGCACCGTCGGCACCGACTACGCCGTGCCCTTCCGCCGCCTCACCGGCCACGGCCACTTCGTCCAGGACGTGG
TCATCAGCTCCGACGGCCAGTTCGCGCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGACCTCTCCACTGGCCTC
ACCACCCGCCGCTTCGTCGGCCACACCAAGGACGTCATCTCGGTCGCCTTCTCCGTCGACAACCGCCAGATCGTCTCCGC
CTCCCGCGACAACACCATCAAGCTCTGGAACACCCTCGGCGAGTGCAAGTACACCATCGGCGGCGACATGGGCGGCGGCG
AGGGCCACACCGGCTGGGTCTCGTGCGTCAGGTTCTCCCCCAACATCCAGCAGCCCACCATCGTCTCCGGCTCCTGGGAC
AAGACCGTCAAGGTCTGGAATCTCACCAACTGCAAGCTCCGCTCCACCCTCGCCGGCCACGGTGGCTACGTGAACGCCGT
CGCCGTCAGCCCCGATGGCTCGCTCTGCGCCTCCGGCGGCAAGGACGGCGTCACGCTGCTCTGGGACCTGTCCGAGGGGA
AGAGGCTGTACCAGCTGGAAGCCGGCTCCATCATCCATGCGCTCTGCTTCTCGCCCAACCGCTACTGGCTCTGCGCTGCG
ACAGAGGAGTCTGTCAAGATCTGGGACCTCGAGTCCAAGCATGTCGTGCAGGACCTCAAGCCAGAAGTGCAGGTCTCCAA
GAACCAGGT-----------------------------------------------------------------------
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---------------
>chr1D_1194
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--------------------------CTCCCGCGACAAGTCGCTGCTGGTCTGGGACCTCACCAACCCGGTCCAGTCCCT
CGGCGACGGCACCGTCGGCACCGACTACGCCGTGCCCTTCCGCCGCCTCACCGGCCACGGCCACTTCGTCCAGGACGTGG
TCATCAGCTCCGACGGCCAGTTCGCGCTCTCGGGCTCCTGGGACGGCGAGCTCCGTCTCTGGGACCTCTCCACCGGCCTC
ACCACCCGCCGCTTCGTCGGCCACGCCAAGGACGTCATCTCGGTCGCCTTCTCCGTCGACAACCGCCAGATCGTCTCCGC
CTCCCGCGACAACACCATCAAGCTCTGGAACACCCTCGGCGAGTGCAAGTACACCATCGGCGGCGACATGGGCGGCGGCG
AGGGCCACACCGGCTGGGTCTCGTGCGTCAGGTTCTCCCCCAACATCCAGCAGCCCACCATCGTCTCCGGCTCCTGGGAC
AAGACCGTCAAGGTCTGGAACCTCACCAACTGCAAGCTCCGCTCCACCCTCGCCGGCCACGGTGGCTATGTCAATGCCGT
CGCCGTCAGCCCCGATGGCTCGCTCTGCGCCTCCGGCGGCAAGGACGGCGTCACGCTGCTCTGGGATCTGTCCGAGGGGA
AGAGGCTGTACCAGCTGGAAGCCGGCTCCATCATCCATGCGCTCTGCTTCTCGCCCAACCGCTACTGGCTCTGCGCTGCG
ACAGAGGAGTCTGTCAAGATCTGGGACCTCGAGTCCAAGCATGTCGTGCAGGACCTCAAGCCAGAAGTCCAGGTCTCCAA
GAACCAGGT-----------------------------------------------------------------------
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---------------
>SNPs
-------------------------------------------S----------S--------S-SSSSSSS--------
---------------------------------------S----------S-------------S-S-------------
---------------S---------------------S-S-------------------------------------SSS
SS---S---------------------------------S------S-----S--S------------------------
---------------S---S----------------------S--------S-----------------S-------S--
-S-----------------S--------S-SSS-SS-SSSS---------------S----------S------------
----------------------------------------------------------------S---------S-----
-------S-----------------------------------------------S------------------------
--------------------------SS---------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-----SS------------------------SS---------------------S---S---S-S---S--S-------
-------------SS--SS---------------------SSS-------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-----S--------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S------S----S---------------S-------------------------------------
S---------------------------------------------------------------------------S---
S------------------------------S-------------S--------------------------------S-
SS------------S--------S--------------------------------------------------------
-----------------------S-------------------S---------------------S------------S-
------------S------S------------------------------------------------------------
-------------------------S----------S-------------------------------S-SSSS--S---
-------------------------------------------------S------------------------------
--------------S------------------------------S----------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S------------------S-------------S-------------------------------------------
---------------------------------S--------------------------------------S-----S-
---------------S-S-SSSS-SSSSS-SS------------------------------------------------
---------S-----------S-S--------------------------------------SS--SS------------
------------S------SSSS-------------------------------------S-SSS---------------
--------------------------------------------------------------------------------
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------------------S---------------------------------------------------S---------
--------------------------S-S------S---------S-------S-S------------------------
S---------------------------S------------------------------------------------S--
---------------------------------------------------------------------------S----
-----------------------S-----------S--------------------------------------------
-----------------------------S------------------------------S-------------------
---------------
>forward_968
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------TCACCCAAGCAA
AAGCATGC------------------------------------------------------------------------
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---------------
>reverse_2895
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--------------------------------------------------------------------------------
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--------------GTCGTCTGTTGAGTGGCTTC----------------------------------------------
--------------------------------------------------------------------------------
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---------------
>forward_1983
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------GCACTCTTGATGGTCATGGC-----------------
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---------------
>reverse_3825
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CCACCTGCGCAATGAA
AACA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------
