>input_sequence_40376
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--------------------------------------------------------------ATGGTTTTTTCTCAGACA
TCCTCTCTGGCAGTAAAGCTTGCACAAGGACCCAAGCTCTTTACTACAAAGACAATTCTCCCCATGGACCCCCCGGGTGT
TGTCTCCTCTGAAAATGCTGAATATGATTTCTCTGATGTTTTTGGTTCCAGTCCAGTCGAGACAGCAACAGAACTTTGTG
TTGTTGATCCAGAGAGCCCTGCAGCTCCCGTTGAGTCCCCTGAGGAGGTTTATAATGATCCTGCGGTCATCTTCAAGCGG
TCACATTCTCTTGTTGGTCCATCATCACTTGTTAGCTGCTCTTTGGGACTTGGCAAGCTCACTCTAAACATAGCAGATGG
ATCATCAGAACTTGTAGGCCACACCACAGAAGAAAAGGAACTTAACCTAGAGCAGTTCAGTGATGAAGAGTTTGGTGATG
CCGTGACTGAGGATGAGGGTGTTGGGCTTGATGACTTTGAAATCTTGAAGCTTGTAGGCCAAGGGGCATTTGGCAAAGTC
TTTCAGGTGAGAAAGAAGGGTACTTCAGAAATATATGCAATGAAAGTTATGAGGAAGGACAAGATACTGGAGAAAAACCA
TTCCGAGTACATGAAAGCTGAAAGAGACATACTGACAAAAGTTGACCATCCTTATGTAGTGCAGCTGAGGTACTCCTTTC
AGGTAGGTCATTTGTATACATATTGTCATCTCTACGTTGGCGTTCATATCTTGGTACAAATATTCAAACAGTTTGCCTGT
GCAGACCAAATATCGACTTTACCTTGTCCTGGACTTCGTAAACGGGGGGCATCTCTTCTTTCAGCTCTACAAGCAAGGAT
TATTTAGGTGCTGTTTCACTTGTTAGTAATTTTGTTTGCCAAAAGATAGCTGCACATGCCTTTAAACTAAACCCTTTCAT
ATTAACAGGGAGGAACTTGCACGAATCTATACGGCTGAGATTATATCTGCTGTAGCCCACCTCCATGCTAATGGGATTAT
GCATAGAGATCTTAAGCCCGAGAACATCCTATTGGATGCTGAAGGCCATGTAAGAATTCTTTGTTGCAGCCAACAATCCC
GTTTTGTCTCGTCTTCAGTCATCTGACATCTATTTGCTTGTGCCGCTGTTATAGGCCATGCTAACTGACTTTGGCCTTGC
GAAAGAATTCCGTGAGAACACCCGATCAAACTCGATGTGTGGCACTGTCGAGTATATGGCCCCTGAAATTATTCAGGGCC
AGGGGCATGATAAGGCCGCAGATTGGTGGAGTGTAGGAATCCTCCTGTTTGAAATGCTGACGGGCAAGGTGAGTTGCATA
TTTGCATGGGATGTCAAGCTTATCATCCGAGAGGTTTTCTGTGCAGACGTGTCATGGCTTATAACTTCCTACTCTTTGCA
GCCCCCGTTTGTCGGGAACAGAGACAAAGTTCAGCAGAAGATAGTGAAGGAGAAGTTGAAGCTTCCTCCGTTTTTGACTA
GCGAAGCCCACTCGCTGCTGAAAGGAGTACGTTTTCCGGCTTGTTTGATTTCATTATTCTTGTAGGAGTAACTCATAGCA
CATATAGTACCATGTAGAGGTCTTTCCAAACAAAACAAAAACAGCATGGGAGCAAATTGGCAGCTTAACTATTTTATCTG
AAAAAAAAA--CAATATTGCAGTTGCTGCACAAAGAAGCCGGCAAGCGGCTGGGAACCGGACCCGGCGGCAGCGACGAGA
TAAAGAGGCACAAGTGGTTCAAGCCGATCAACTGGAGGAAGCTGGACGCCCGGGAGATCAAGCCGAGCTTCCGGCCCGAC
GACGCTGGCCTGACCTGCATCGCCAACTTCGACGTGTGCTGGAACAACACGCCCGTGCTGGACTCCCCGGCCGCCACCCC
CGTCACCGCCGGCGGCGGGCAAGGCAACTTCGCGGGGTTCACCTACGTCAGGCCCGCGCCGTTCCTCCATGACCTGAAGC
CGCCCTCGAGCT----CTAGCTAG--------------------------------------------------------
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>chr2B_1_TraesCS2B01G121500
AAAAGAATGCCGATGTTAGAGCTGATTTCGAGGTGTT---GAACATAGCGTGGCTAGGATGCTAGAATT--------TGG
AAGTACAATTTTGGTCTAAAGGCACACTGTCCTGCTTTTAGAAAGCACGTAGTATGCCTTTGTGCTCTAAGAATCCACTG
GAAGTAACTTTCTAGAAATCTTATCTCATTGCTAGATCGCAAAGCTTTAGGTTCCCTGTGCTAGGAGTTTAGTACACTAT
GCA-------CACTGTTCAGGATGTTTGAGGGCGTGCAAGATGCTCGAACTGCTGATGATGCAGTGATGCAGCTTAGATT
TCTGTAAATGATGAAGCCGCAGAGTCATCTGCTGGCTTCTTCCTTGCTGATTGCTGTGTGGGAGATTCAAATGAGGCCAG
TGAGAGGTGCTGACAGTCGGTGATGCGAACTGAGATCCTGCCAGTAGTCAACTGATTGTCCTTTAGTTTTGTCGATGTCG
AGAGACAGTTTTCCTGCAACACATGATTGCTTCTGGTGTCAGTGAAGGTTTAAATCCTAGCAAGACAAATATTCTTAGAA
CTGAC---AGTAACCGTTTGTACCATGTTCTTATAGATTCCCCTACAGAAGATATTGGTCGTTTGCACAGGGTATCCCTA
TCCAATACTTGTCCTGCAAATGTTGCTTTCCTTTTTAGATTTCTTCCAATACTAGATGAGACTGACGATTTATCTGTTCT
GTGTCCGTTTTAGATTTCTGCTTCACGAGTCCAGGAAGAACAACACTGGCATCAAGCAAGTCATATTCAGCAGGGAACAG
CAGCATCGTTTTGATCCGCCTTTTCGCAGGGTACTTGGGCAATTCATAGTGGAAACTTCAACTTGTTCAAGGCCTCTCTG
TTCACAGCAGTACATCATTTTACATCCTTGGAAATTGTGGAGCGAGCCTACTTGAGAATGCAATGTAGAATGAGTCATTA
GTTTCAGTAAGTT-GAGACTTGCCCTGGAGCTGCCATACTCGGCTGCATTGGCCTTTGATAGATGGTTTTTTCTCAGACA
TCCTCTCTGGCAGTAAAGCTTGCACAAGGACCCAAGCTCTTTACTACAAAGACAATTCTCCCCATGGACCCCCCGGGTGT
TGTCTCCTCTGAAAATGCTGAATATGATTTCTCTGATGTTTTTGGTTCCAGTCCAGTCGAGACAGCAACAGAACTTTGTG
TTGTTGATCCAGAGAGCCCTGCAGCTCCCGTTGAGTCCCCTGAGGAGGTTTATAATGATCCTGCGGTCATCTTCAAGCGG
TCACATTCTCTTGTTGGTCCATCATCACTTGTTAGCTGCTCTTTGGGACTTGGCAAGCTCACTCTAAACATAGCAGATGG
ATCATCAGAACTTGTAGGCCACACCACAGAAGAAAAGGAACTTAACCTAGAGCAGTTCAGTGATGAAGAGTTTGGTGATG
CCGTGACTGAGGATGAGGGTGTTGGGCTTGATGACTTTGAAATCTTGAAGCTTGTAGGCCAAGGGGCATTTGGCAAAGTC
TTTCAGGTGAGAAAGAAGGGTACTTCAGAAATATATGCAATGAAAGTTATGAGGAAGGACAAGATACTGGAGAAAAACCA
TTCCGAGTACATGAAAGCTGAAAGAGACATACTGACAAAAGTTGACCATCCTTATGTAGTGCAGCTGAGGTACTCCTTTC
AGGTAGGTCATTTGTATACATATTGTCATCTCTACGTTGGCGTTCATATCTTGGTACAAATATTCAAACAGTTTGCCTGT
GCAGACCAAATATCGACTTTACCTTGTCCTGGACTTCGTAAACGGGGGGCATCTCTTCTTTCAGCTCTACAAGCAAGGAT
TATTTAGGTGCTGTTTCACTTGTTAGTAATTTTGTTTGCCAAAAGATAGCTGCACATGCCTTTAAACTAAACCCTTTCAT
ATTAACAGGGAGGAACTTGCACGAATCTATACGGCTGAGATTATATCTGCTGTAGCCCACCTCCATGCTAATGGGATTAT
GCATAGAGATCTTAAGCCCGAGAACATCCTATTGGATGCTGAAGGCCATGTAAGAATTCTTTGTTGCAGCCAACAATCCC
GTTTTGTCTCGTCTTCAGTCATCTGACATCTATTTGCTTGTGCCGCTGTTATAGGCCATGCTAACTGACTTTGGCCTTGC
GAAAGAATTCCGTGAGAACACCCGATCAAACTCGATGTGTGGCACTGTCGAGTATATGGCCCCTGAAATTATTCAGGGCC
AGGGGCATGATAAGGCCGCAGATTGGTGGAGTGTAGGAATCCTCCTGTTTGAAATGCTGACGGGCAAGGTGAGTTGCATA
TTTGCATGGGATGTCAAGCTTATCATCCGAGAGGTTTTCTGTGCAGACGTGTCATGGCTTATAACTTCCTACTCTTTGCA
GCCCCCGTTTGTCGGGAACAGAGACAAAGTTCAGCAGAAGATAGTGAAGGAGAAGTTGAAGCTTCCTCCGTTTTTGACTA
GCGAAGCCCACTCGCTGCTGAAAGGAGTACGTTTTCCGGCTTGTTTGATTTCATTATTCTTGTAGGAGTAACTCATAGCA
CATATAGTACCATGTAGAGGTCTTTCCAAACAAAACAAAAACAGCATGGGAGCAAATTGGCAGCTTAACTATTTTATCTG
AAAAAAAAA--CAATATTGCAGTTGCTGCACAAAGAAGCCGGCAAGCGGCTGGGAACCGGACCCGGCGGCAGCGACGAGA
TAAAGAGGCACAAGTGGTTCAAGCCGATCAACTGGAGGAAGCTGGACGCCCGGGAGATCAAGCCGAGCTTCCGGCCCGAC
GACGCTGGCCTGACCTGCATCGCCAACTTCGACGTGTGCTGGAACAACACGCCCGTGCTGGACTCCCCGGCCGCCACCCC
CGTCACCGCCGGCGGCGGGCAAGGCAACTTCGCGGGGTTCACCTACGTCAGGCCCGCGCCGTTCCTCCATGACCTGAAGC
CGCCCTCGAGCT----CTAGCTAGGTTGTAAGACTCGCTC-AGTGCACCCGAAACGGGTGCGCGCAATTTTGATCTAGTT
TATTCACTGAACTACTGTGTTCTATGGCTTGTATGATGTATATCGATTCTTCTGCATCTTGCATTACGTGCGGCAATGAG
AAAGTTGGAGACAGAAAGCAACTAACAATATCTGTCAGTACGGATTGGTAGAGTA-------------------------
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-----------------------------------------------------------------------CTAACCAAA
TCCAGTCAGATTTTGAAGCTGAAAGTTGAGAAGCATGAATTTCTGAAACCAATGATCGACGTGAGCTGAAACTTTCTCAG
ATTAATCATCTATGCATTCTTCAGTTTCTGGGATTTTTTTGTAATATGTTTGGA--------------------------
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-----------------------------------------------------AACTTTGAAATTTCTGTTAAAATTCAG
TCAAATTTTGAAGCTAAACGTTCAGAAGCATGAA--TCTCAAACCAATGGTTCCCGTTAGCTGAAAGTTTCCCAGATTGG
TTATATATCTGCGCTTCAATTTGTGGAATTGTTTCAGAATTTGCTGGAGAATGAACCTTCATAACTCTTCCTACCCACAG
TCCTATCG-------ATACATGGATCTCTCAAAAGTTTCCCAGAACCATTTGGACAGCATTTAGACCATACCAGGGCTCA
AATCGAAGCACATACTTCCTCCATTCCTAAATACTTGTCTTTCTAGAGATTTCAACAAGTGACTACATACGGAGCAAAAT
GAGTGAATCTACACTCTAAAATATGTCCATATACATCCGTATGTAATAGTCTATTTGAAATATCTAAAAAGACAAATATT
TAGGAACGGAGGGAGTACAACACATGGAGAATCAACCTCCAGAATCTTCTTGCCTACTGCCGTACTGACATAATAATATT
GACCTCAACAGAAATATCAATAACATCAAATACTTGCTTTAATGCGTTTCTCGCTGTGAATTAAACTACAGGTTGGAATT
CATGGCCCAAACAAACGCAGGTGAAGATAAGGGGGTGTGAGTCATGGAAAACTTAGGAGCCATAAAAAGAAACGGCACTT
TTGTCTAAT
>chr2D_1
AAAGGAATGTCGATGCTAGGCTGG--TTCGAGGTGTTGAAGAACATAGCGTGGCTAGGATGCTAGAATT--------TGG
AAGTACAATTTTGGTCTAAAGGCACACTCTCCTGCTTTCAGAAAGCACGTAGTATGCCTTTGTGCTCTAAGAATC---TG
GAAGTAACTTTCGAGAAATCCTGTCTCATTGCTAGATTGCAAAGCTTTAGGTTCCCTGTGCTAGGAGTTTAGTACACTAT
GCA-------CACTGTTCAGGATGTTTGAGGGCGTGCAAGATGCTCGAACTGCTGATGATGCAGTGATGCAGCTTAGATT
TCTGTAAATGATGAAGCCGCAGAGTCATCTGCTGGCTTCTTCCTTGCTGATTGCTGTGTGGGAGCTTCAAATGAGGCCAG
TGAGAGGTGCTGACAGTCAGTGATGCGAACTGAGATCCTGCCAGTAGTCAACTGATTGTCCTTTAGTTTTGTCAATGTCG
AGAGACAGTTTTCCTGCAACACATGGTTGCTTCTGGTGTCAGCGAAGGTTTAAATCCTAGCAAGATAAATATTCTTAGAA
CTGACTACAGTAACCGTTTGTACCATGTTCTTATAGATTCCCCTACAGAAGATATTGGTCGTTTGCACAGGGTATCCCTA
TCCAATACTTGTCCTGCAAATGTTGCTTTCCTTTTTAGATTTCTTCCAATACTAGATGAGACTGATGATTTATCTGTTCT
GTGTCCGTTTTAGATTTCTGCTTCACGAGTCCAGGAAGAACAACACTGACATCAAGCAAGTCATATTCAGCAGGGAACAG
CAGCATCGTTTTGATCTGCCTTTTCGCAGGATACTTGGGCAATTCATAGTGGAAACTTCAACTTGTTCAAGGCCTCTCTC
TTCACACCAGTACATCATTTTACATCCTTGGAAATTGTGGAGCGAGCCTACTTGAGAATGCAATGTAGCAGGAGTCATTA
GTTTCAGTAAGTTGGAGACTTGCCCTGGAGCTGCCATACTCGGCTGCATTGGCCTTTGATAGATGGTTTTTTCTCAGACA
TCCTCTCTGGCAGTAAAGCTTGCACAAGGACCCAAGCTCTTTACTACAAAGACAATTCTCCCCATGGATCCCCCGGGTGT
TGTCTCCTCTGAAAATGCTGAATATGATTTTTCTGATGTTTTTGGTTCCAGTCCAGTCGAGACAGCAACAGAACTTTGTG
TTGTTGATCCAGACAGCCCTGCAGCTCCCATTGAGTCCCCTGAGGAGGTTTATAATGATCCTGCGGTCATCTTCAAGCGG
TCACATTCTCTTGTTGGCCCATCATCACTTGTTAGCTGCTCTTTGGGACTTGGCAAGCTCACTCTAAACATAGCAGATGG
ATCATCAGAACTTGTAGGCCACACTACAGAAGAAAAGGAACTTAACCTAGAGCAGTTCAGTGATGAAGAGTTTGGTGATG
CCGTGACTGAGGATGAGGGTGTTGGGCTTGATGACTTTGAAATCTTGAAGCTTGTAGGCCAAGGGGCATTTGGCAAAGTC
TTTCAGGTGAGAAAGAAGGGTACTTCAGAAATATATGCAATGAAAGTTATGAGGAAGGACAAGATACTGGAGAAAAACCA
TTCCGAGTACATGAAAGCTGAAAGAGACATACTGACAAAAGTTGACCATCCTTATGTAGTGCAGCTGAGGTACTCCTTTC
AGGTAGGTCATTCGTATACATATTGTCATCTCTACGTTGGCATTCATATCTTGGTACAAATATTCAAACAGTTTGCCTGT
GCAGACCAAATATCGACTTTACCTTGTCCTGGACTTTGTTAACGGGGGGCATCTATTCTTTCAGCTCTACAAGCAAGGAT
TATTTAGGTGCTGTTTCACTTGTTAGTAATTTTGTTTGCCAAAAGATAGCTGCACATGCCTTTAAACTAAACCCTTTCAT
A-TAACAGGGAGGAACTTGCACGAATCTACACAGCTGAGATTATATCTGCTGTAGCCCACCTCCATGCTAATGGGATTAT
GCATAGAGATCTTAAGCCCGAGAACATCCTATTGGATGCTGAAGGCCATGTAAGAATTCTTTGTTGCAGCCAACAATCCC
GTTTTGTCTCCTCTTCGGTTATCTGACATCTGTTTGTTTGTGCCACTGTTATAGGCCATGCTAACTGACTTTGGCCTTGC
GAAAGAATTCCGTGAGAACACCCGATCAAACTCGATGTGTGGCACTCTCGAGTATATGGCCCCTGAAATTATTCAGGGCC
AGGGGCATGATAAGGCCGCAGATTGGTGGAGTGTAGGAATCCTCCTGTTTGAAATGCTGACGGGCAAGGTGAGTTGCATA
TTTGCATGGGATGTCAAGCTTATCATCCGAGAGGTTTTCTGTGCAGACGTTTAATGGCTTATAACTTCCTACTCTTTGCA
GCCCCCGTTTGTCGGGAACAGAGACAAAGTTCAGCAGAAGATAGTGAAGGAGAAGTTGAAGCTTCCTCCGTTTTTGACTA
GCGAAGCCCACTCGCTGCTGAAAGGAGTACGTTTTCCAGTTTGTTTGATTTCATTATTCTTACAGGAGTAACTCATAG--
-------TACCATGTAGAGGTCTTTCCAAACAAAACAAAAACAGCATGAGAGCAAATTGGCCGCTTAACTATTTAATCTG
AAAAAATAA--CAATATTTCAGTTGCTGCATAAAGAAGCCGGCAAGCGGCTGGGAACCGGACCCGGCGGCAGCGACGAGA
TAAAGAGGCACAAGTGGTTCAAGCCGATCAACTGGAGGAAGCTGGACGCCCGGGAGATCCAGCCGAGCTTCCGGCCCGAC
GTGGCCGGCCTGACCTGCATCGCCAACTTCGACGTGTGCTGGACCAACACGCCCGTGCTGGACTCCCCGGCCGCCACCCC
CGTCACTGCTGGCGGCGGGCAAGGCAACTTTGCGGGGTTCACCTATGTCAGGCCCGCGCCGTTCCTCCATGACCTGAAGC
CGCCCTCAAGCTCTAGCTAGCTAGGCTGCAAGGTTCGCTCTAGTGCACCCGAAATGGGTGCGCGCAATTTTGATCTAGTT
CATTCACTGAACTGCTGTGTTCTATGGCCTGTACGATGTATATCGATCCTTCTGCATCT-GCTTTACTTGCGGCAATGAG
-AAGTTGGAAACAGAGAGCAACTA-CAATATCTGCAATTACAAATTGGCTGATAGTACTCCCTCCGTCCGGAATTACTTG
TTGCAGAAATGGATGTATCTAGTAGATACATCCATTTATGTGACAAGTAAGTAATTCCGGATGGGGCATGTCCCCAGGAT
ATGCTCAAGAGTTGCATTGCAGCCCTGTGACTGATGAATCTGAAACTCAGAAACAAGAAAGGAAAACCGTAGTGCAAAAC
TGGCTGCGGCCATGAGTCGGCTCTCAAGGTAGATCTACCTAGAGTTTTGACTAATAGTTACGGTTAAATTTAACGTATGC
GTTAATTATATGGGGCTAATAGCAGTTTACATCATCAATAAATATTCTAGAGCTTACTGCTTGTCTAGTCTACTGCTCCT
ACTTATTTCCAACACTCTCTTTGTATCTCTCCCTTCGAAGTTCGAGGAGCAGGGGCAGCACCAAACACCAAGCAAAGCAG
CAGATTCAGCAATCAGCAGGTACTACGCAGATACGCAGGTACTACGCAGATACGCAGATTCAGCAAAGCAGCTCTCCACT
CCCTGGACAAATCGATTCAACAATCAGCAGGTAGTCGATAAATCTGCACCGAGCGCTTCTCTCTTTCTTTCTCAACCCCC
TCTCTGAACTCTGATTTATGCAGCTGCCAAACAGCCAGAATAACCCACGGTTTCATGCAAGCTACTACTAAAAAAGAGAT
AATAACATACCCTGTCACAAAGGATCACAAAGGCAGCATTGGTTTTGCAGTCCGACAATGACACCGGCTACTACGATGAC
CACGGTGAAGCCAAGACCATGGACAAGCTCAACTCCACCTTCTGGCAGGGGGTCGGTCTGATCGGATGCGTGCAGTCAGT
CGCGTGTCAAGAAGGTGGTGTTCGATCAGTTCACCGGGGGGACAAACCAGGTTGGGTTCCTGAAGCTGGCCCTTGGGCGA
GCGG---TGCTGCTGCAAGAGGTGACAGTCATAAACTGCAGCCGTTGGCTTCCAAGAGAATGTG---------GGTCTTG
GACAAACCTTCTTTGGAGGTCTGTGGGGGCGCAGCAGGTCACATTTGGAGGTACAACAGAGCACCTGATCTTTCTAGCAA
AGACCCATTTATTTCTTAAGGCAGTCCTGATGGAGCGTTCGTTAAGTAGCACTTAGCAGCTAGAGCATCATCGATCATTT
GACTGTTTGAGTGACCTATTTATTTGTTAAGGCAGTACAGATGGAGCGTTCAGAGTAAATAGCATAAAACGAGTACTACT
TTACAGGCTATGGTTTTAAAAAACTACCGGTTTTTAATTTTTTTCAGATAACTACCAAATGGGTGGTCGGCTGTTTCAAA
AAACCCCAAATGCACGTTGTTTAAAAATTAAACATGTTAATGACAGGTCGGGCCCGCACCTAAACAACATGTCTCTTTGA
CTGTGTGTTTGACCGTTAACTGGCATGCCGGGCCCACAGGTCAGTGTATCTTTCATCGATTTTTTTACAGAATAACCCCT
CCAAATATTTTTAAAAAGCAATCAGGTCCCTATAATAATTTTTTAAAAGCAATCGGGTCTTTGGAGTCGCTGTCGCCGCG
CTGCCACGGCGCTCCGCCTGGGGTCAGCGCCGTGCCGCCTGGGGTCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGCCGCCATGGCGCTCCGCCGGGTGTCGCCCCGCGCGCGCCGCCATGGGTC
GCCGCCTGGGGTCACTCTTTCTGCCACAGTGGTCCGCCTGCGGTCGCCGCCGCGCCACCATGGGGTGACACGCCTGGAGT
TGCCGCCGCCTGTCCTGGAGCTGTTGCCCGCCAGGGGTCACTGCTTCGCATCTTCGGTAAGCGCCACCAGCACGAGGCGG
ACGCTGGTCCGGTGGTGGGCGTAGAGAGGTCGGGGGAAAAGGAGGTGGGCCGGAGGAATGGCCAGGGTTGAGCCCCAGTG
ATCGTCGGCGACGCGTGGGCGGGCGGCAGAGGGAGCAGTTCCCCCTCGATCTGACATGGCTGACATGTGGGCCACAGACC
TCAGTTAACGGTCAAATAGCCGGTTTGTTTAGGGGTGGGCCCGGCCTGTCAGAAACCGGATCAATTCTAAATCGCACGGT
CTTTAGGGTTTTTTGAAATAGCCGACCACCCATTTGGTAGTTATCTGAGAAAAATTAAAAACCGGTGGTTTTTTGAAACC
CTAGCATAGTTTTATGCTATTTACTCGAGCGTTCATTACCGTTGTCGTTTGAATGACTCGTAGCTCTTTGTGAATGGCTT
TTATTGTGGCTGTTGCCCACGTTGCTACCTGAATGGTAACAATTGTTTCTGCATTCAGTGTGATCTCCATGGCCTGTGGC
TCTGGCTTCCACATGTTTATTAGAATTGGTCTTAACATGATTTTCATGTTTTGATTCTGCCCATGTTACAATTGGGCAAG
ATTTATGTTTAGTTAGTTTCACTGCTTTTTTTTTTTGAAAGTGGTTAGTTTCACTGCTTGATGCAGTGGTGTGTTGTATG
TTCTGGAAAAACTGATGTGTGTTGTAACTCCAGAGAATTGCTCGACTAAAAGCTTTGTATCCCATTGGAACTGTCGGGCA
GCACCTCTCTGCCCATGCTGGAGCTCACATTACATTTTCTGTTTAATTAATAGAAAATGTAAGTGATTGGAGTTGAACCC
CTATTTCACTGTACCATGGACCCACCTGTCGTATTTGTAATTATCTTTTTTTTTTACTGGGAACTGTAGGGGAAACCCCC
ACAGCATATCAAAACTTTATTGATAAAGAGAGAGAATGTACAAGTAATAAGAGGGATTACAAGAGGTAATCAAACTAAAC
TAAGGGGAGAAAGAGAAGAAACAAGTTAAAATTACAGAAAATCGTATTTGTAATTATCATTCAACAACCAAATTTAGTAG
AAAGCAAACCTTTCTTCAGATTAAATTTTGAAGCTGAAAGTCTAGAAGAATGAATATCTCAAACCAATCCAAGTGAACTG
AAACTTCCGCAGATTAGTGATATATGT-----------------------------------------------------
----------------ATTCTTCAATTTCTGAATTGTTTTCACTTTTTTTTTTCTGGAAACTTTGAACTTCCTAACCAAA
TCCAGTCAGATTTTGAAGTTGAAAGTTGAGAAGCATAAATTTCTCAAACCAATGATCCACGTGAGCTGAAACTTTCTCAG
ATTAGTCATATATGCATTCTTCATTTTCTGGGATTTT-TTGTACTCCCTCCATTCCCTTATACTAGGCCACTTCGTTTTT
CGTGTCAAAATTTGACTTGTATTTTTGGTCAACCAAAGATGGATTATATGTCATACAAAATATATCATCTGAAAGTTTTT
TGAAATGTGCATCCAATGAAATACTTTTTGTGGCATATAGCTCACTTTTTGTTGGTAAAATTAATGGTCAAAGTTAGACA
TAAAAATATGAAGTGGCCTTGTATAAGGGAATGGAGGGAGTAATACGTCTGGGAACTTTGAAATTTCTGTTAAAATTCAG
TCAAATTTTGAAGCT--------------ATGAATCTCTCAAACCAGTGGTTCCCGTTAGCTAAAAGTTTCCCAGATTAG
TTATCTATCTGCGCTTCAATTTGTGGAATTGTTTCAAAATTATCTGGAGAATGAACCTTCATAACTCTTCCTACATAGAG
TCCTATTGATACATCATACATGGATCTCTCAAAAGTTTCCCTGAACCATTTGGACAGCATTTAGACCATACTAGGGCTCA
AATCAAAGCACATAC-----------------------------------------------------------------
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>chr2A_1
AAAGGAATGCCGATGCTAGGCTGA--GTCGAGGTGTTGAG---CATAGCGTGGTTAGGATGGTAGGATTGTGGAAGTTGG
AAGTACAATTTTGGACTAAAGGCACGTTGTCCTGCTTTTAGAAAGCAT---GTATGCCTTTGTGTTCTAAGAATC---TG
GAAGTAACTTTCGAGAAATCTTTTCTCCTTGATAGATTGCAAAGCTCCAGCTTCCTTGTGCTGGGAATTTAGTACACTAT
GCACACTGTTCACTGTTCAGGATGTTTGAGGGCATTCAAGATGCTCGAACTGCTGATGATGCAGTGATGCACCTTACATA
TCTGTAAGTGGTGAAGCCGCAGAGTCATCCGCCGGCTTCTTCCTTGCTGATTGCTGTGTGGGAGCTTCAAATGAGGCCAG
TGATAGGTGCTGATGGTCGGTGATGCAAACTGAGATCCTGCCAGTAGTCAACTGATTGTCCCTTAGTTTTGTTGATGTCG
AGAG--AGTTTTCCTGCAACACATGATTGCTTCTGGTGTCAGTGAAGGTTTAAATCCTAGCAAGATAAATATTCTTAGAA
CTGACTACAGTAACCGTTTGTACCATGTTCTTATAGATTCCCCTACAGAAGATATTGGTCGTTTGCACAGGGTATCCCTA
TCTAATACTTGTCCTGCAAATGTTGCTTTCCTTTTTAGATTTCTTCCAATACTAGATGAGACTGACAATTTATCTGTTCT
GTGTCCGTTTTAGATTTCTGCTTCACGAGTCCAGGAAGAACAACACTGGCATCAAGCAAGTCATATTCAGCAGGGAACAG
CAGCATCGTTTTGATCTGCCTTTTCGCAGGATACTTGGCCAATTCATAGTGGAAACTTCAACTTGTTCAAGGCCTCTCTG
TTCACAGCAGTACATCATTTTACATCCTTGGAAATTGTGGAGCGAGCCTACTTGAGAATGCAATGTAGCAGGAGTCATTA
GTTTCAGTAAGTCGGAGACTTGCCCTGGAGCTGCCATACTCGGCTGCATTGGCCTTTGATAGATGGTTTTTTCTCAGACA
TCCTCTCTGGCAGTAAAGCTTGCACAAGGACCCAAGCTCTTTACTACAAAGACAATTCTCCCCATGGATCCCCCGGGCGT
TGTCTCCTCTGAAAATGCTGAATATGATTTCTCTGATGTTTTTGGTTCCAGTCCAGTCGAGACAGCAACAGAACTTTGTG
TTGTTGATCCTGACAGCCCTGCAGCTCCCGTTGAGTCCCCTGAGGAGGTTTATAATGATCCTGCGGTCATCTTCAAGCGG
TCACATTCTCTTGTTGGTCCATCATCACTTGTTAGCTGCTCTTTGGGACTTGGCAAGCTCACTCTAAACATAGCAGATGG
ATCATCAGAACTTGTAGGTCACACTACAGAAGAAAAGGAACTTAACCTAGAGCAGTTCAGTGATGAAGAGTTTGGTGATG
CCGTGACTGAGGATGAGGGTGTTGGGCTTGATGACTTTGAAATCTTGAAGCTTGTAGGCCAAGGGGCATTTGGCAAAGTC
TTTCAGGTGAGAAAGAAGGGTACTTCAGAAATATATGCAATGAAAGTCATGAGGAAGGACAAGATACTGGAGAAAAACCA
TTCCGAGTACATGAAAGCTGAAAGAGACATACTGACAAAAGTTGACCATCCTTATGTAGTGCAGCTGAGGTACTCCTTTC
AGGTAGGTCATGTGTATACATATTGTCATCTCTGCGTTGGCATTCATATCTTGGTACAAACATTCAAACAGTTTGCCTGT
GCAGACCAAATATCGACTTTACCTTGTCCTGGACTTCGTAAACGGGGGGCATCTCTTCTTTCAGCTCTACAAGCAAGGAT
TATTTAGGTGCTGTTTCACTTGTTAGTAATTTTGTTTGCTAAAAGATAGCTGCACATGCCTTTAAACTAAACCCTTTCAT
ATTAACAGGGAGGAACTTGCACGAATCTATACGGCTGAGATTATATCTGCTGTAGCCCACCTCCATGCTAATGGGATTAT
GCATAGAGATCTTAAGCCCGAGAACATCCTATTGGATGCTGAAGGCCATGTAAGAATTCTTTGTTGCAACCAACAATCCC
GTTTTGTCTTCTCTTTGATTATCTGACATCTATTTGCTTGTGCCGCTGTTATAGGCCATGCTAACTGACTTCGGCCTTGC
GAAAGAATTCCGTGAGAACACCCGATCAAACTCGATGTGTGGCACTCTCGAGTATATGGCCCCTGAAATTATTCAGGGCC
AGGGGCATGATAAGGCCGCAGATTGGTGGAGTGTAGGAATCCTCCTGTTTGAAATGCTGACGGGCAAGGTGAGTTGCATA
TTTGTATGGGATGTCAAGCTTATCATCCGAGAGGTTTTCTGTGCAGACGTGTCATGGCTTATAACTTCCTACTCTTTGCA
GCCCCCGTTTGTTGGGAACAGAGACAAAGTTCAGCAGAAGATAGTGAAGGAGAAGTTGAAGCTTCCTCCGTTTTTGACTA
GTGAAGCTCACTCACTGCTGAAAGGAGTACGTTTTCCAACTTGTTTGATTTCATTATACATCATGTAGTAACTCATAGCA
CAAATAGTACCATATAGAGGTCTTACAGAACAAAA----AACAGCATGAGGG-AAACTGGCCAGTTAACTGTTTTATTAT
CTAAAATATTGCAATATTTCAGTTGCTGCACAAAGAGGCCGGCAAGCGGCTGGGAACCGGACCTGGCGGCAGCGACGAGA
TAAAGAAGCACAAGTGGTTCAAGCCGATCAACTGGAGGAAGCTGGACGCCAGGGAGATCCAGCCGAGCTTCCGGCCCGAC
GTCGCCGGCCTGACCTGCATCGCCAACTTCGACGTGTGCTGGACCAACACGCCCGTGCTGGACTCCCCGGCCGCCACCCC
CGTCACTGCCGGCGGCGGGCAAGGCAACTTCGCGGGGTTCACCTACGTCAGGCCCGCGCCGTTCCTCCATGACCTGAAGC
CGCCCTCGAGCT----CTAGCTAGGCTGCAAGGTTCACTCTAGTGCGCCCGAAACGGGTGTGCGCAATTTTGATCTAGTT
CATTCACTGAACCGCTGTGTTCTATGGCCTGTATGATGTATA--GATTCTTGTGCATCT-GCTTTACTTGCGGCAATGAG
-AAGTTGGAAACAGAGAGCAACTAGAGAAGTTGAGAAGTCGGCCCTTTCTCTGCTCCTTTTTCACTCAATGATTCCTTTG
AATTTGCCGACCAAAAATTCTATGTCTATTCTAT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------GTCCGACAATGGCACCGACTACTAGGATGAC
CACGGTGAAGCCAAGGCCATGGACAAGCTCAACTCCACCTTCTGGCAGGGGGTCGGTCTGATCGGATGCGTGCAGTC---
-GCGTGTCAAGAAGGTGGTGTTCGATCAGTTCACCGGGGGGACAAACCAGGTTGCGTTCCTGAAGCTGGCCCTTGGGCGA
GCCGTGCTGCTGCTGCAGGAGGTGACAGTCATAAACTGCAGCCGTTGGCTTCCAAGAGAATGTGGGCCAGTAAGGTCTCG
GACAAACCTTCTTTTGCTGAACTGCAGCCGTCGGCTTCCAAGAGAATGTGCGCCAAGAC---------------------
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AAACTTTCACAGATTAGTGATATTTTGAATTGTTTTCATTTTTCACTCAATGATTCCTTTGAATTTGCCGACCAAAAATT
CTATGTCCGCTGACAAATTCTTGAATTTCTGAATTGTTTTCA---TTTTTTTTCTGGATACTTTGAACTTCCTAACCAAA
TCCAGTCAGATTTTTAAGCTGAAAGTTGAGAAGCATGAATTTCTCAAACCAATGATCCACGTGAGCTGAAACTTTCTCAG
ATCAGTCATATATGCATTCTTCAATTTCTGGGATTTT-TTGTAATATGTCTGGA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AACTTTGAAATTTCTGTTAAAATTCAG
TCAAATTTTGAAGCTAAACGTCCAGAAGCATGAATCTCTCAAACCAATGGTTCCCGTTAGCTGAAAGTTTCCCAGATTAG
TTATATATCTGCGCTTCAATTTGTGGAATTGTTTCAAAATTTTCTAGGGAATGAACCTTGCCTATAGTCATATT------
-------G-------ATACATGGATCTCTCAAAAGTTTCCCAGAACCATTTGGACAGCATTTAGACCATACCAGGGCTCA
AAGCAAAGCACATAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------
>chr4D_1041
--------------------------------------------------------------------------------
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----------------------CACAACGCCCCAAGCTCTTTACAGGGATGATACTTCTGCCAAAAGGGCCTCCAGATGT
TGTCCTTCCTGAAAATGTTGAGTTTGATTTTAACGATGTTTTTGGTGCTACGGCGGTCCAGACCCCCACAGAAGTAAGCA
TTCTCACTCCAGGCAGCCCTGCACCTTTGGCTGAGTCCAATGAGGAGGTTTACAATGACCCTGTAGTCATTACCAAGCGA
TCTCATTCTCTTGTTGGCCCAACTTCACTTGTTAGCCAATCCTTGCCACTTAGTAAGCTTACTCTACATGAGTCTGAGAG
CTCATTAGATCTGCTAGAGTGTCTTTCTAAAGAAAAGAAAAGTGGCCAGGGGAGTCTTAGTGATGAAGAGCTCAATGATA
CAACAAAGGAGAATGAGGCTGTTGGACTCGACGACTTTGAACTCTTGAAGCTTGTTGGCCAAGGGGCATTTGGCAAAGTC
TATCAGGTGAGAAGGAAATGTACTTCAGATATATATGCAATGAAAGTCATGAGGAAAGACAAGATTTTGGAGAAGAACCA
TGCTGAGTACATGAAAGCAGAGAGAGATATACTGACAAAAGTTGATCATCCTTTTGTGGTGCAGCTGAGGTACTCCTTTC
AGGTAGG-------------------------------------------------------------------------
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>chr4B_1096
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-----------------------------------------------------------------------------TGT
TGTCCTTCCTGAAAATGTTGAGTTTGATTTTAACGATGTTTTTGGTGCTACGGCGGTCCAGACCCCCACAGAAGTAAGCA
TTCTCACTCCAGGCAGCCCTGCACCTTTGGCCGAGTCGAATGAGGAGGTTTACAATGACCCTGTAGTCATTACCAAGCGA
TCTCATTCTCTTGTTGGCCCAACTTCACTTGTTAGCCAATCCTTGCCACTTAGTAAGCTTACTCTACATGAGTCTGAGAG
CTCATTAGATCTGCTAGAGTGTCTTTCTAAAGAAAAGAAAAGTGGCCAGGGGAGTCTTAGTGATGAAGAGCTCAATGATA
CAACAAAGGAGAATGAGGCTGTTGGACTCGACGACTTTGAACTCTTGAAGCTTGTTGGCCAAGGGGCATTTGGCAAAGTC
TATCAGGTGAGAAGGAAATGTACTTCAGATATATATGCAATGAAAGTCATGAGGAAAGACAAGATTTTGGAGAAGAACCA
TGCTGAGTACATGAAAGCAGAGAGAGATATACTGACAAAAGTTGATCATCCTTTTGTGGTGCAGCTGAGGTACTCCTTTC
AGGTAGG-------------------------------------------------------------------------
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---------
>SNPs
---S-----------S---SSSS-SS------------------------------------------------------
---------------------------------------------------------------------------SSS--
------------S---------S--------------S------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------S-------------S-------------------------------------------------
--------------------------------------------------------------------S-S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------S-----S--S------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S-----------------------SS-----------------
--S---------------------------------------------S------------S------------------
------S-----------S-------------------------------------------------------------
-----------------------------------------------------------S--------------------
-S---S-------------------------------------S------------------------------------
------S-------------------------------------------------------------------------
-------------------------S--S---SS----------------------------------------------
S------------S--------------S------------------------------S--S----S------------
S--------S-----S--------S---------SS------S-----SS---SS-------------------------
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--------------------------------------------S------------S----------------------
----S----S-------------S-------------S-----------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S--------------------------------------------------------S-
------------------------------------S-----S-------------------------------SS-S--
------S-------------------------------------------------------------------------
----S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS
>forward_385
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------GCTGATTGCTGTGTGGGAGA---------------
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---------
>reverse_2207
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----------------------------------------------GTCGAGTATATGGCCCCTGA--------------
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>forward_1385
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----TCAGAACTTGTAGGCCACACC-------------------------------------------------------
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>reverse_3108
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GTGCGGCAATGAG
AAAGTTGG------------------------------------------------------------------------
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---------
