>input_sequence_40364
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----ATGGTGAAGGAGAGATTGACCCTGACGCTGGAGAGGTACCACCGCTTCTTCGTCGACCCCTACGCCACCCGCCTCA
CCACCGTCCACCTCAACAACGTACGTGCTTGCTAATCCACCCACTCTCAACTCT--------------------------
------CAATCTCATCTGCTTCT-CTTGTTTTGGTTCCAACTTTCTCCGTGATCGGAGTGTCCATGTTCCTGAATCTGAA
TGTATGACCCCGCCCTTCTTCTTCCATGCATTTATTTCTCTTTTAGGGCGGAATTAATCTTTCGTGTCTCTTTTCCCCAT
GTTT--AACTGAATCTGTTACTCCTA---TTCCCTTCTTTCGGTTTTAACCAATATAT----------------------
--------------------------------------------------------------------------------
--------------------------AAATACTAGGCTAGGTTTTTTTTTTTGGAG--AAATTAAATACTACGCTAGGTG
ATACTGAATATTGT---TCTTCTTCCATTTTTGTTAACTGAATCTGTTGTTTTGTTTTCTT-TTTTTGAGATTCAATCTC
TTATTATGTGAT----TATATGTGATGTGTTACCTCTCCTCTCTGCGCGCGACTCTGCCATGGCCGCTTGCAGATCATCT
ACATGCATGGTTTCGCCAGGCTCCACGGCAAGAAGGTTTTCTTCCATCTATCTATCTATTT---GCCTTTTGCTTTGCTC
CGCTGCTGCCTGCTGGTGTGATTGACGGGATGGAGTTGCTCTTGCAGTCCCAGATCATGGACCACATGGTGGGGCAGGTC
GACCTGCAGCCGCCGCGCCGCTCAACGCTGCACGGTAGCGCCGCGCTCGCGCCGCCCTCCGCCGCGCGGATCGCCGCCGC
ACAGGCCTCGGCCGACGTCGACGCCATCGGCTGGGCGGAGTGCCCCATCGGCTGCGTCACCGCCTTCTCCGCCTTCGCTG
ACCCGCCGGACCCGGTGGAGCCCATGCCCCCGCCCGCCCACCACATGCTCGCGCTGGCGATGCCCCTGCGCCGCCCACGC
TCCAAGAGGACGCGCACCTCCCCTTACCAGCTCC------CTGCCGCGTCCAACACGGCCAAGGTGAAGGAGGAGGCGGT
CATGGAAGAGGAGGGTGAGGATATGTCGTTGGCGACGCCGTCGCCGCCGCGATGGATGCGCTCCCCTACCCCGCCACCTC
CGCCGCCGTCGCCCACGCCGCGGCCACAGACCGTGGTGCCTCCGCCACTATGGATGCGCTCCCCTACTCCGCCACCTCCG
CCCCCGTCGCCCTCTCCGCGGCCGCAGACCGTGGTGCCTCCGCCTTCGCCGCCGTGCAGGGGCCAGCCTGAGTTGGAGCC
GACCCTCTCTCGTCCACCAGGCTTCGGCTCGCCGCCGGAACCATGCAGGAGCCGGCCTACGCTGGAGCGGATCCTCCCCA
CACCACCACCACCAGGCTTCGGCCCGCCGCCGGAACCATGCAGGAGCGGGCCTACGCTGGAGCCGATCCTCCCAACACCA
CCACCACCAGGCTTCGGCCCGCCGCCGGAACCATGCAGGAGCGGGCCTACGCTGGAGCCGATCCTCCCAACACCACCACC
ACCAGGCTTCGGCCCGCCGCCGCAACCATGCTGGAGCCGGCCTACGTTGGCGCCGCCTCCTACCCCACCACCAGGCTTCG
GTTCGCGCCAGGTGGCGCCGCCTCCTCCGCACCTGTCCTGGGGCTTGCCGTTGCGACCGCCGTCGGGCCCAGGAGCGCCT
ACGTTCACGCAGCATCTTCAGCCTGCAGGTCCGGCACCACTCTGGCGCTCGCCGATGTCGCCGTCTTATCCGGCACCGTG
CTGGGGCGCGCCTTCTGGGCCGCCGCCGGCGCAAGCGCCTTGGCGCTGGCCACATCCACCGCCGCGCTGGGCACCACCTC
ATATGCTGCGCCCGCCGCCGCCACCCTGGGACTGCATGAGGCCGTTTGCACCTCCTATGCCGCCGCAACACCCGCCGCAT
TTTGAGATGCAGCATACGCCACCGGCACCGGGGGCGTGCTCGGGCAGGCAGGTGATTTACTTCTAG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>chr4B_1_TraesCS4B01G181900
CCCGTCCGTCGAGGTCCAGGACATGCCCGCCG---ACGCCGCCGCCCAGGGCAGCAGCGGCGGCATTGCCTCTGCTGTGT
GATTTGTAGCGTGGTTGATTGAAGCGGCGTGGAACCGGCGGTTGATCTGGTGTGCTTTGTTCTTCGCTGCTTTTGGTTCG
GTGGTGATCTGCAGTAGTTGTAAATTAATTTTAGTTTTACTGGTTTTGTTAATGATGAAGAACCATGTTGCCTGTTCAGT
TATTAACCGCGTTGATATGCGTCTGCATTTGGGATGAGATGCGTTTTGTTTCTTGCTGCTTTGATGATC-----------
-------------CTGACACCGGTTGCTGGTTTGAGCGAGTCCTCGTCGCTCTGA-------------------------
----GATGCAGAAAGAAACTGCGTTAAAAAAAGTCCTCTCTCTCTCTTGTTGCGTCAAATAAGAGTGAAC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ATGCGGAGGAGCCACTCGGCGAGCAA----GAAGTGAAAATGCGGACCT
GACCAGAATTCAGAATCCGTAGCCATCATCAGAAGTTGAGAACCAACCAAAGGATGGGAGGGAGGGACGCCTTTGATCAG
TCTTGGCCGGGCCTCCCAAGTCTGCAAAGGCAGGCTCAACTCGACTTTCTTTCAA------TGATCTGACCTGATCGGAT
GAAAGCAAAAGAG------------------CCTTTGGTTTGT-CTGCTTGTGCAGGCGACCGAGCGAGCGAGCGAAAGC
CTGTTCTGTTTGGTGGGGCCCC------GGAACAGCCCACCAACAAGAAGGTGCCCCATTCAATTCCTTCATCCCTGTCC
TGCTCTGCGCTCTGCGTTACGTA-------CGTCTCTCTCTCTCCCGGGGCA----------------------------
-----GCACGTAACGTGCCGATCGAGCGTGTTGGCC----GTGACAAAAAGCAAGGCCAGCAGGGAGGAGAGT-------
---CTTGCCAAACGGAAGGGGGGAGAGGGCCGAGAGAGAGA--------------GAGAGAGAGAGAGAGAGAGAGAGAG
GAGTTGAGCAGC-GGAAGGAGGA---CGGAGAAGGGGAGGAGAGGGCAGGGGAGGCGTGAGTCGGAAGAGGAGAGGGCGC
GGCCATGGTGAAGGAGAGATTGACCCTGACGCTGGAGAGGTACCACCGCTTCTTCGTCGACCCCTACGCCACCCGCCTCA
CCACCGTCCACCTCAACAACGTACGTGCTTGCTAATCCACCCACTCTCAACTCT--------------------------
------CAATCTCATCTGCTTCT-CTTGTTTTGGTTCCAACTTTCTCCGTGATCGGAGTGTCCATGTTCCTGAATCTGAA
TGTATGACCCCGCCCTTCTTCTTCCATGCATTTATTTCTCTTTTAGGGCGGAATTAATCTTTCGTGTCTCTTTTCCCCAT
GTTT--AACTGAATCTGTTACTCCTA---TTCCCTTCTTTCGGTTTTAACCAATATAT----------------------
--------------------------------------------------------------------------------
--------------------------AAATACTAGGCTAGGTTTTTTTTTTTGGAG--AAATTAAATACTACGCTAGGTG
ATACTGAATATTGT---TCTTCTTCCATTTTTGTTAACTGAATCTGTTGTTTTGTTTTCTT-TTTTTGAGATTCAATCTC
TTATTATGTGAT----TATATGTGATGTGTTACCTCTCCTCTCTGCGCGCGACTCTGCCATGGCCGCTTGCAGATCATCT
ACATGCATGGTTTCGCCAGGCTCCACGGCAAGAAGGTTTTCTTCCATCTATCTATCTATTT---GCCTTTTGCTTTGCTC
CGCTGCTGCCTGCTGGTGTGATTGACGGGATGGAGTTGCTCTTGCAGTCCCAGATCATGGACCACATGGTGGGGCAGGTC
GACCTGCAGCCGCCGCGCCGCTCAACGCTGCACGGTAGCGCCGCGCTCGCGCCGCCCTCCGCCGCGCGGATCGCCGCCGC
ACAGGCCTCGGCCGACGTCGACGCCATCGGCTGGGCGGAGTGCCCCATCGGCTGCGTCACCGCCTTCTCCGCCTTCGCTG
ACCCGCCGGACCCGGTGGAGCCCATGCCCCCGCCCGCCCACCACATGCTCGCGCTGGCGATGCCCCTGCGCCGCCCACGC
TCCAAGAGGACGCGCACCTCCCCTTACCAGCTCC------CTGCCGCGTCCAACACGGCCAAGGTGAAGGAGGAGGCGGT
CATGGAAGAGGAGGGTGAGGATATGTCGTTGGCGACGCCGTCGCCGCCGCGATGGATGCGCTCCCCTACCCCGCCACCTC
CGCCGCCGTCGCCCACGCCGCGGCCACAGACCGTGGTGCCTCCGCCACTATGGATGCGCTCCCCTACTCCGCCACCTCCG
CCCCCGTCGCCCTCTCCGCGGCCGCAGACCGTGGTGCCTCCGCCTTCGCCGCCGTGCAGGGGCCAGCCTGAGTTGGAGCC
GACCCTCTCTCGTCCACCAGGCTTCGGCTCGCCGCCGGAACCATGCAGGAGCCGGCCTACGCTGGAGCGGATCCTCCCCA
CACCACCACCACCAGGCTTCGGCCCGCCGCCGGAACCATGCAGGAGCGGGCCTACGCTGGAGCCGATCCTCCCAACACCA
CCACCACCAGGCTTCGGCCCGCCGCCGGAACCATGCAGGAGCGGGCCTACGCTGGAGCCGATCCTCCCAACACCACCACC
ACCAGGCTTCGGCCCGCCGCCGCAACCATGCTGGAGCCGGCCTACGTTGGCGCCGCCTCCTACCCCACCACCAGGCTTCG
GTTCGCGCCAGGTGGCGCCGCCTCCTCCGCACCTGTCCTGGGGCTTGCCGTTGCGACCGCCGTCGGGCCCAGGAGCGCCT
ACGTTCACGCAGCATCTTCAGCCTGCAGGTCCGGCACCACTCTGGCGCTCGCCGATGTCGCCGTCTTATCCGGCACCGTG
CTGGGGCGCGCCTTCTGGGCCGCCGCCGGCGCAAGCGCCTTGGCGCTGGCCACATCCACCGCCGCGCTGGGCACCACCTC
ATATGCTGCGCCCGCCGCCGCCACCCTGGGACTGCATGAGGCCGTTTGCACCTCCTATGCCGCCGCAACACCCGCCGCAT
TTTGAGATGCAGCATACGCCACCGGCACCGGGGGCGTGCTCGGGCAGGCAGGTGATTTACTTCTAGGGACTGCTCTCGTA
TCGCATTTGCTGTTATTGCTAAGCTTGACAGTTTTTGTTTTGACGGTAGCTAAGCTT----GAGAGTTACTACTACACGG
TGACGGGAAAATTAGGGACAAGGTTATCAATTTACTGTTGGAGCTGCGAACTGTTTTTGCTCTGCTCCACCTTGCTGCTG
CTAGTCTTGCCATGCCATTATTGTGCCCAGAACCATGATCAGTGGGGATATTGGAATGATTCATGCATGTCTCATGTTTA
CTTATGTACAGTACTTTCTTTCCGCACTAGCAAAACGTCAAAGTTTTGTTCGCGTGTACGACCACAACAAACCAGTTTTT
ATAGTACTGTAGTATGCTATTCCGTCCAAGTGTGTGTACTACTGCCAATTTCATCAAATCTGTTGCAGAATGCTGACAAT
GCTTTGGATCTTCTATTTTCTAGAGAATACCTCAAGAGGGCAGGGGTTCC------TACATTTCATTAAGAATAAGAAAA
TAGCCTGGTTAATGAGAAATAACCGGGTAAAAATCCGATACAAACGCACATACTTGCCGCACCATTGATTAACGAACAAT
CGTGCGAAAACCACGACCACATGATTGATTAAGGGACAACCGTACAAAA--ATAAGGATCACATCTATATCTATTACCTA
CCTAATAATAATAAAGTGAAGATTTTTTTTTTGGATTAGTTTGAATTGCTAAGTGAAGAAGATAT--------TCCTTCC
CTCATGTCTTTATATCTGTTAATATTTTTATTACATAATAATTGACGGCTGAGATTTAGAAGGATGAGGATTTTAAAGGT
AACCTCACGGAAAGATCGA----------------------------TCGACTGATCCGTTCCTG---AACAAAAGAGCA
CGTTTTTTACTCGGATATATAAACAAGATATATAAACAACAGTTTTGCTAGAACTCATCTAGATGAGATATAATTTGGTC
TCATTCACCTTTTATAGTCATTGGATGTGATGTTATAAGATGCGTGTGTGCTGACGTGGGTTGTATATGCTATTGTT
>chr4A_1
CCCGTCCATCGAGGTCCAGGACATTCCCGCCGCCGACGCCGCCGCCCAGGGCAGCAGCGGCGGCATTGCCTCTGCTGTGT
GATTTGTAGCGTGGTTGACTGAAGCAGCGTGGAACTGACGGTTGATCTGGCGTGCTTTGTTCTTCGCTGCTTTTGGTTCG
GTGGTGATCTGCAGTAGTTGTAAATTAATTTTAATTTTACTGGTTGTGTTAATGATG-AGAACCATGTTGCCTGTTCAGT
TATTAACCGCGTTGAGATGCGTCTGCATTTGGGATGAGATGCGTTTTGTTTCTTGCTGTTTTGATAATGAGATGCGTCTG
CATTTTGAAATCTCTGACAGTGGTTGCTGGTTTGAG-GAGTCCTTGTCGTTCTGAATCTACTTGGTGGCTCGGTTCAGTT
CAGCGAGGCAGAGAGAAACTGCGTTG----AAGTCCTCTCTCTTTTATTGGTGCGTAAAGTTTGCTCGGTGGGATGGGAT
AGTGACTTAACGGTCTTGATCCAGCTCGCTGTGATAATGATCTGCCTGTGCTAAACTGCCACGCACAATAGCTACATGTA
TGTTGACTGAATTTCTAATTTGGGTAAGTCAATTTTGTGGGTGAAGGAATGGATTAGAGGAGGATGAAAGATGGAGGAAG
AAGAAAAAAGGACGACCGTTGGATCTTAATGTAATGACCCAACAAATCTACTTACACAAAAAATTTAGGTTACTGTATGA
CTCGAGAGACAAGGCGCTCGTATTTGGTGGAATGCAGAGCAGGCTCTCGGCGAGGAAGAACGAAGTGAACATGCAGACGT
GACCAAAATTCAAAATCCACAGCCATCATCAGAAGCTGAGAACCAAAGGAT--------GGGAGGGACACTTTTGACGAG
TCTTGACCGGGCCTCCCAAGTTTGCAAAGGCAGGCTCAACTCAACTTTCTTCCTAATGACCTGACCTGACCTGATCGGGT
GAAAGCAAAAGAGAAACGAAACAGCGTCGTGCCTTTGGTTTGTCCTGCTTGTGCAGGCAG--------GCGAGGGAAAGC
CTGTTCTGTTCTGTTTGGCGAGGGAAATGAAACCGCCCACCAACAAACAGGAGCCCCATTCAATTCCTTCGTCCCTGCCC
TGCCCTGCCCTGCCATGCGGTAACGTACCGCGTCTCTCTCTCTCTCACACACATACAGACAGCGCTTCGGGGCAGCACCA
AATCTGCACGTAACGTGCCGATCGAGCGTGTTGGCC----GTGACAAAAAGCAAGGCCAGCAGGGAGGAGAGGGGAGGGG
AACCTTGCCAGACGGAAGGAGAGAGAGAGAGGAGGGAGAGCGAGAGCGCGCGCGCGAGAGAGAGAGAGAGAGAGAGAGAG
TTTGGCAGCGGAAGGAAGGAGGACGGCGGAGAAGGGG------------------------------GAGGAGAGGGCGC
GGCCATGGTGAAGGAGAGATTGACCCTGACGCTGGAGAGGTACCACCGCTTCTTCGTCGACCCCTACGCCACCCGCCTCA
CCACCGTCCACCTCAACAACGTACGTGCTTGCTAATCCACCCACTCCCAACTCT--------------------------
------CAATCTCATCTGCTTCTTCTAGTTTTGGTTCCAACTTTCTCCTTGATCGGAGTGTCCATGTTCCTGAATCTGAA
TGTATGACCCCGACGTTCTTCTTTCATGTATTTATTTCTCTTTTAGGG----ATTGATCTTTCGTGTCTCTTTTCCCCAT
GTTTTTAACTGAATCCGTTACTCCTAATATTCTCTTCTTTCGTTTTTAACCAATAATATATAAATACTCCCTCCGTCTCA
AAATTCTTGTCTTACATTTGTCAAAATACCGATGTATCAAGTCACGTTTTAATATTAAATACATCCATATCTAGACAAAT
TTAAGACAAGAATTTTGAAACAGAGGAAGTACTACGCTAGTTTTATTTTTGAGAAATTAAATTATATACTACGCTAGGTG
ATACTGAATATTGT---TCTTCTTCCATTTTTGTTAACTGAATCTGCTGTTATGTTTTC-T-TTTTTGAGATTCAATCTC
TTATTATGTGAT----TGTATGTGATGTGTTCCCTCTCCTCTCTGCGCGCGACTCTGCCATGGCCGCTTGCAGATCATCT
ACATGCATGGTTTCGCCAGGCTCCACGGCAAGAAGGTTTTCTTCCATCTATCTATCTATGT---GCCTTTTGCTTTGCTC
CGCTGCCGGTGTG-GGTGTGATTGACGGGATGGAGTTGCTCTTGCAGTCCCAGATCATGGGCCACATGGTGGGGCAGGTC
GACCTGCAGCCGCCGCGCCGCTCTACGCTGCACGGTGGCGCCGCGCTCGTGCCGCCCTCCGCCGCGCGCATCGCCGCCGC
ACAGGCCGCGGCCGACGTCGACGCCATCGGCTGGGCGGAGTGCCCCATCGGCTGCGTCACCGCCTTCTCCGCCTTCGCTG
ACCCGCCGGACCCGGTGGAGCCCATGCCCCCGCCCGCCCACCACATGCTCGCGCTGGCGGTGCCCCTGCGCCGCCCGCGC
TCCAAAAGGACGCGCACCTCCCCCTACCAGCGCC------CTGCCGCGTCCAACACGGCCAAGGTGAAGGAGGAGGTGGT
CATGGAAGAGGAGGGTGAGGATATGTCGTTGGTGACGCCGTCGCCGCCGCGATGGATGCGCTCCCCTACCCCGCCACCTC
CGCCCCCGTCGCCCACGCCACGGTCGCAGACCGTGGTGCCTCCGCCACTATGGATGCGCTCCCCTACTCCGCCACCTCCG
CCCCCCTCGCCCACGCCGCGGCCGCAGACCGTGGTGCCTCCGCCTTCGCCGCCGTGCAGGGGCCAGCCTGAGTTGGAGCC
GACCCTCTCCCGACCACCTGGCTTCGGCTCGC------------------------------------------------
---------------------------CGCCGGAACCATGCAGGAGCGGGCCTACGCTGGAGCCGATCCTCCCCACACCA
CCACCACCAGGCTTCGGCCCGCCGCCGCAACCATGCAGGAGCGGGCCTACGCCGGAGCCGATCCTCCCCACACCACCACC
ACCAGGCTTCGGCCCGCCGCCGCAACCATGCTGGAGGCGGCCTACGTTGGCGCCGCCTCCTACCCTGCCACCAGGCTTCG
GTTCGCGCCAGGTGGCGCCGCCTCCTCCGCAGCTGTCCTGGGGCTTGCCGATGCCACCGCCGTCGGGCCCAGGAGCGCCT
ACGTTCACGCAGCATCTTCAGCCTGCAGGTCCGGCACCACTCTGGCGCTCGCCGATGTCGCCGTCTTATCTGGCACCGTG
CTGGGGCGCGCC---------------GGCGCAAGCGCCCTGGCGCTGGCCACACCCCCCGCCGCGCTGGGCACCACCTC
ATATGCTGCGCCCGCCGCCGCCACCCTGGGACTGCATGAGGCCGTTTGCACCTCCCATGCCGCCGCAACATCCGCCGCAT
TTTGAGATGCAGCATACGCCACCGGCACCGGGGGCGTGCTCGGGCAGGCAGGTGATTTACTTCTAGGGACTGCTCTCGTA
CCGCATTTGCTGTTATTGCT-AGCTTGTCAGTTTTTGCTTTGACGGTAGCTAAGCTTTCGAGAGAGT---TACTACACGG
TGACGGGAAAATTAGGGACAAGGTTATCAATTTACTGTTGGAGTTGCGAACTGTTTTTGCTCTGCTCCACCTTGCTGCTG
CTAGTCTTGCCATGCCATTCTTGTGCCCAGAACCATCATCAGTGGG-ATATTGGAATGATTCATGCATGTCTCATGATTA
CTTATGTACATCACTTTCTTTCCGCACTAGCGAAACGTCAAAGTTTTGTTCGCGTGTAAGACCACAACAAACCAGTTTTT
ATACTAGTAGTATATGCTATTCCGTCCAAGTGTGTGTACTACTGCCAATTTCATCAAATCTGTTGCAAAGTGATGACAAT
GCTTTGGATCTTCTATTTTCTAGAGAATACCTCAAGAGGGCAGGGGTTCCTACATTTACATTTCATTAAGAATAAGAAAA
TAGCCTGGTTAATGAGAAATAACCGGGTAAAAACCCGATACAAACGCACATACTTGCCGCACCATTGATTAACGAATAAT
CATGCGAAAACCCCAACCATACGATTAATTAAGGGACAACCATACAAAAAAATAAGGATCACATCTATATCTATTACCTA
CCTTATAATAAAGTGAAGAATATA--TTTTTTGGATTAGTTTGAATTGCTAAGTTAAGAAGAATTCTTAGTTCTCCTTCC
GTCACGTCTTCATATCTGTTAAT-TTTTTATTACATAATAATTGACGGCTGAGATTTAAAAGAAAGGAGATTTTAAAGGT
AACCTCACGGAAAGATCGACCGGCCTAGCGCGTATTCCATGGAACGGTCAACTGATCCGTTCCTGCAAAACAAAAGAGCA
CGTTTTTTACTCGGATATATAAACAA------------------------------------------------------
-----------------------------------------------------------------------------
>chr4D_794
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----GCACGTAACGTGCCGATCGAGCGTGTTGGCCCGCCGTGACAAAAAGCAAGGCCATAAGGGGGGAGAGGGCAGGGG
AACCTTGCCTGACGGAAGAGGG-------------------------------------------GAGAGAGAGAGAGAG
AGTAGCAGCGGGAGGAAGGAGGA---CGGAGAAGGGG------------------------------GAGGAGAGGGCGC
GGCCATGGGGAAGGAGAGATTGGCCCTGACGCTGGAGAGGTACCACCGCTTCTTCGTCGATCCCTACGCCACCCGCCTCA
CCACCGCCCACCTCAACAACGTACGTGCTTGCTAATCCACCCACTCTCAACTCTTAATCTCATCTTCTTTTTTTGAAAAA
TATTCTCAATCTCATCTGCTTCT-CTAGTTTTGGTCCCAACTTTCTCGTTGATCG-----TCCATGTTC------CTGAG
TGTATGATCCTGCCGTTCTTCTTTCATGTATTTCATTTTTTTATTA---GGGATTGATCTTTCATGTCT-TTTTCGCCAT
GTTT--AACTGAATCTGTTAG---------TCCCCTCTTTCATTTTTAACCAATATAAATACTACTAGGT----------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GGTA
CTACTGAATATTGTTCTTCTTCTTCCATTTTTGTTAACTGAATCTGTTGTTATGTTTATTTATTTTTGAGATCCAGTCTC
TTATATTATGTGATGATATATGTGATGTGTTTCCTCTCCTCTCTGCGCGCGACTCTGCCATGGCCGCTTGCAGATCATCT
ACATGCATGGTTTCGCCAGGCTCCACGGCAAGAAGGTTTTCTTCCATCTATCTATGTAATCTTCGCCTTTTGCTTTGCTC
CGCTGCCGGTGTG-------ATTGACGGGATGGAGTTGCCCTTGCAGTCCCAGATCATGGACCACATGGTGGGGCAGGTC
GACCTGCAGCCGCCGCGCCGGTCCACGCTGCACGGTGGCGCCGCGCTCGCGCCGCCCTCCGCCGCGCGCATCGCCGCCGC
ACAGGCCGCGGCCGACGTCGACGCCATCGGCTGGGCGGAGTGCCCCATCGGCTGCGTCACCGCCTTCTCCACCTTCGCTG
ACCCGCCGGACCCGGTGGAGCCCATGCCCCCGCCCGCCCACCACATGCTCGCGCTGGCGGTGCCCCTGCGCCGCCCGCGC
TCCAAGAGGACGCGCACCTCCCCCTACCAGCGCCCTGCCTCTGCCGCGTCCAACACGGCCAAGGTGAAGGAGGAGGAGGT
CATGGAAGAGGAGGGTGAGGATATGTCGTTGGCGACGCCGTCGCCGCCGCGATGGATGCGCTCCCCTACCCCGCCACCTC
CGCCCCCGTCGCCCACGCCGCGGCCACAGACCGTGGTGCCTCCGCCACTATGGATGCGCTCCCCTACTCCGCCACCTCCG
CCCCCGTCGCCCA---------------------------------CGCCGCCGAGCAGGGGCCAGCCTGAGTTGGAGCC
GACCCTCTCCCGACCACCAGGCTTCGGCTCCC------------------------------------------------
---------------------------CGCCGGAACCATGCAGGAGCCGGCCTACGCAGGAGCCGGTCCTCCCCACACCA
CCACCACCAGGCTTCGGCCCGCCGCCGGAACCATGCAGGAGCGGGCCTACGCTGGAGCCGATCCTCCCCACACCACCACC
ACCAGGTTTCGGCCCGCCGCCGCAACCATGCTGGAGCCGGCCTACGTTGGCGCCGCCTCCTACCCCACCACCAGGCTTCG
GTTCGCGCCAGGTGGCGCCGCCTCCTCCGCACCTGTCCTGGGGCTTGCCGATGCCACCGCCGTCGGGCCCAGGAGCGCCT
ACGTTCACGCAGCATCTTCAGCCTGCAGGTCCGGCACCACTCTGGCGCTCGCCGATGTCGCCGTCTTATCCGGCACCGTG
CTGGGGCGCGCC---------------GGCGCAAGCGCCCTGGCGCTGGCCACATCCACCGCCGCGCTGGGCACCACCTC
ATATGCTGCGCCCGCCGCCGCCACCCTGGGACTGCATGAGGCCGTTTGCACCCCCTATGCCGCCGCAACATCCGCCGCAT
TTTGAGATGCAGCATACGCCACCGGCACCGGGGGCTTGCTCGGGCAGGCAGGTGATTTACTTCTAGGGACTGCTCTCGTA
CCGCATTTGCTGTTA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>chr4D_2985
--------------------------------------------------------------------------------
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-------------TATTGCTAAGCTTGACAGTTTTTGTTTTGACGGTAGCTAAGCTT----GAGAGT---TACTACACGG
TGACGGGAAAATTAGGGACAACGTTATCAATTTACTGTTGGAGTTGCGATCTGTTTTTGCTCTGCTCCACCTTGCTGCTG
CCAGTCTTGCCATGCCATTCTTGTGCCCAGAACCATGATCAGTGGGGATATTGGAATGATTCATGCATGTCTCATGTTTA
CTTATGTACAGCACTTTCTTTCCGCACTAGCAAAACGTCAAGGTTTTGTT-GCGTGTAAGACCACAACAAACCAGTTTTT
ATAGTAGTA-----TGCTATTCCGTCCAAGTGTGTGTACTACTGCCAATTTCATAAAATCTGTTGCAAAATGCTGACAAT
GTTTTGGATCTTCTATTTTCTAGAGAATACCTCAAGAGGGCAGGGGTTCCTACAT------TTCATTAAGAATAAGAAAA
TAGCCTGGTTAATGAGAAATAACCAGGTAAAAACCTGATACAAACGCACATACTTGCCGCACCATTGATTAACGAACAAT
TGTGCGAAAACCCTGACCACACGATTGATTAAGGGACAACCGTACC--AAAATAAGGATCACATCTATATCTATTACCTA
CCTAATAATAAAGTGAAGA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>SNPs
-------S----------------S-------------------------------------------------------
------------------S------S---------S-S------------S-----------------------------
---------------------------------S-----------S-----------S----------------------
---------------S------------------------------------------S------S--S-----------
-------------------SS---------------S-------S----S------------------------------
------S-----S------------SSSSS-------------S-SS-SSSSSSSS---SSSSSS-SSSS----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S---S--S-S---------S--------------S----S---S-
-----S------S-----SS---------------S----------SSS-SSSSSSSSS---------S-S-----SS--
-----S---------------S--------------------S--------S-S----------S-------------S-
----------------------------------------------------------SSSSSSSSSS-----S------
----------SS--SS---SSS-------S---S------------SS---S------------------S------S--
---S----S--SSSSSSSSSSS----------------------S-SSSSSS----------------------------
------------------------------------------------------------------------S-------
----------S----------------S-SS---S-----S---------------------------------------
SSSSSS---S-S-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S---------------------S-------------------------------
--------------S--------S----S-------------------S--S---S------------------------
------------------------------------------S--------------S----------------------
--------------------------------------------------------------------------------
----------------------------S-----S-----S---S-----SS-S-S--------S---------------
---------------------------------------------------S----------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
------S-SSSSSS------------------------------------------------------------------
-----------------------S------------S-------------------------------S-----------
-------S------------------------------------------------------------------------
-----------------------------------------------------------S----------------S---
-----------------------S-------S--------------------------------------------S---
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
------------S-S-----------------------------------------------------------------
---------S--S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------S------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------S---S-------------------------
--------------------------------------------------------------------------------
------------SSSSSSSSSSSSSSS------------S----------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
S------------------------------------------------------------------SSS----------
-------------------------------------------S------------------------------------
-------------------S------------------------------------------------------------
-----------S----------------------------------------------S---------------------
------S-SSSS-------------------------------------------------------S------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
------------S--------S----------------------------------------------------------
-----------SSSSSS---S--SSS----------------------------S-------SS----------------
S---S-----S------------S----------------------------------S---S-S-SS------------
-------------------------------------------------S------------------------------
--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_407
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AGTCCTCGTCGCT
CTGAGAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_2254
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------TGGTGTGATTGACGGGATGG-----------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_1291
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AGGGAGGAG
AGTCTTGCCAA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_2637
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CGGT
CATGGAAGAGGAGGGT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_1695
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CTGAA
TGTATGACCCCGCCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_3669
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--------------------------------------------------------------------ACTACTACACGG
TGACGGGA------------------------------------------------------------------------
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-----------------------------------------------------------------------------
