>input_sequence_40347
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ATGTCACCGGCGACGGCGAGAGGCGGTGC
CCAGGAGGAC---CAGGCCGGCGAAGCCGGCGTGGACAAGGACGGCGCCGCCGAGGGAGGGAAGGGCACGTGGAGGCACG
CGGCGGTCCACGTGGCGACGACGATCGCCACGCCGGCAGCCTACGCTCCCTTGCCCTTTGCCCTCGCATCCTTGGGCTGG
CCTCTGGGTAAATTTTCACAAACCGATGTGCTATTAACAATCGCCATACTGTTTATTTACCGTACGGTGTAAATTCTCTG
GTTGGTTATTTTTTGATCGGGTG--ATTAGCGGCTCTGTTTTTCCCACAGGTGTTTGCAGTTTGGTGATAGGGACGCTGG
TCACCTGGTGTTCTAGCCTGGCCGTTGCCTCGCTGTGGCAGTGGAACGGGGAGAAGCACACCAGCTACCGGCTGCTCGCA
CAAAGCATATTTGGTCAGTGCAATTTTCC--TCCAACAAATAG---TAGTTCTTACCATCTGACGAATACTGTAACTGCA
GAAACCTTTTTTATTGTTGCAAAAGAAAGTTGCTGAGAGAAATGCTCTTTTGATCATTTAACTGCAATTCTCGTCAATGG
TGCACTTATGATTCAACATCGACTGTTAAGTGTTAACAGCACAATAGTTGGTGAAAATTTACCTTGAG-AGTGACTCTGT
ACTTTGTTGATCAGGTCCATGGGGCTACTGGTATGTGTCGTTCTTCCAGCAAGTGGCGTCGGTTGGCAACAACATTGCGA
TCCAGATTGCGGCCGGCAGCAGCCTCAAGGCCGTCTACAAGCACTACTACGCCGCCGACCATGGCGCGATGACGCTGCAG
CACTTCATCCTCCTCTTCGGCGCGTTCGAGCTGTTTCTCTCGCAGCTTCCCGACATCCATTCGCTCCGGTGGGTGAATGC
TACCTGCACTGCGTCCACCATTGGGTTTGCCGGGACAGCCATCGGTGTCACGATATACGATGGTAAAATTCAGTAAATTT
TCAT----CATA----AAGTACTGAAATTGCTGAAGATATGAAACAATCTGACAGCATCCTCTGCTGGCTACCGCACTAC
CGCAGGATATCGGGTTGACCGAAATGATGTTGGCTACAGCCTGCAAGGAAGCACCGGAACTAAGGTCTTCAGAGGTTTCA
ATGCACTGGGCACAATAGCCTTCTCATTTGGTGATGCAATGCTGCCAGAAATCCAGGTGCCCACCTGAAAATTCAGTTGA
TGTATCGATGAATTAAGTGTACAATCAATCATTCCTTGTGTAAAACTGGCTGAAATGCAGAGCACCGTGCGAGAACCGGC
GACGACAAACATGTACAAGGGTGTCTCGACGGCGTACACATTGATCGTCGTGTCCTACTGGACACTGGCATTCAGTGGCT
ATTGGGCATTTGGCTCTGAAGTCCAGCCATACATCTTGTCCTCCCTGACTGTCCCAAGATGGGCAATTGTAATGGCAAAC
ATATTTGCAGTCATTCAGATCACAGGTTGCTTTCAGGTAACTGTAACTTATGGCAAACGTGCTACTTCCATCAGAAGTTT
CTTGGCAACCATCCAGTAACTAACTGTACCTCT------TCTTCACAAAGATATACTGCAGGCCGACATACGCGCACTTT
GAAGAGCGCATTCAGGCGAAGAACACGGCGTACAGAGCATGGCTGTGGCGACTGATGTACACCTCTGCATACATGGCGAC
GATCACCCTTGTTGCTGCCGCAATGCCATTCTTTGGGGACTTTGTATCAGTTTGTGGAGCGGTTGGGTTCACCCCACTGG
ACTTTGTGCTGCCTGCATTGGCATTTCTCAAGGCCGGGAAGCTGCCCAAAAACCTGGGCCTGCGGCGTACTGTCAAGGCC
CTTTGCTGCTCCGGCGCCGTCTTGTTCTCTGTCATCGGAGTTCTTGCGTGCACTGGCGCCATCAGAGCAATTGCGCTCGA
TGTCAAGACCTACAAGTTCTTCCATGACATGTGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr3A_1_TraesCS3A01G102300
AGATATTTGAGCATTTAAATATTTTATATTATTTTAAATGCCCAAATTCAAATATTTATGATTTAATTCAAAAACCCTAG
GATGGCCTAGGAAAATGTGCACCATTTTTGGCAGAGGTTTTGAACCAAGACAAAAATGATGGGCATTTTAGAAGGGCATT
TCAGGTTCATTGAAAAAATTATTTTAGTAACCCTAGTTGGTTTCAGAGGGGACTGGGGGTTCTGTCATCCCCATTTCAAG
TTTCTGATGAAAGAATAAACATGATGCAACACTCTAATGCATGACTAGCTAGGGTGTGACATCAGAGAAGGAGGTTGACG
AGGAGTAGTTTTTTATCTATCGTAGGAGGAGGATATAAACTATCTATGTATCGTTTTTATCTCTCGTTTATTTATCTATG
CCTATAGTATCACACGATGTTGAATGTGTATCGGGTCGGAGTAGAAGAAGAAGAAATATAACGCGTCTGCTAGAGCGGCG
CGCGCGCAATATTTTACAGCGGACGTTGGAGCCAGCGCACAGCGGCGCGTACAAACTGGCTACAGAGACGTTGTAAACGC
TTTTTTAGCGTGCCACGCGTTGCGCGCCTTGTTGGAGATGTTTTTACTGTATCTTTGCTTAGTCCTTGGTAATAATATAT
AGATCTAACTTTCCTCACAAAACAGTAGCATATACTATTTTCTTCGTCTCAAAATAAGTGTCTTAACTTTGTATTAGTTT
TGATATAAAATTGTACTAAGACTGAGACATTTATTTAGGGACAGAGGGTGTACTTGGAAAGAAGCGGTTGGTTTTCGTTG
TTCCATGCCAAAGCATGTATTCCATTTCCACGCTACTCCAATATGAGATGAGTCCATCTTTCTCCGCTTCCGTTCTTCA-
----------GTGCAGAAACCGCCTGGGTCAACACCAGATAAGAGGCGTGACATAAGGCAGCGGATCACTCGCCCTCAAG
CTCTTCTTAGTTCTTACTGAAGTCCAGTGAAGAGGAGCAGCAGCAGTGGGCATGTCACCGGCGACGGCGAGAGGCGGTGC
CCAGGAGGAC---CAGGCCGGCGAAGCCGGCGTGGACAAGGACGGCGCCGCCGAGGGAGGGAAGGGCACGTGGAGGCACG
CGGCGGTCCACGTGGCGACGACGATCGCCACGCCGGCAGCCTACGCTCCCTTGCCCTTTGCCCTCGCATCCTTGGGCTGG
CCTCTGGGTAAATTTTCACAAACCGATGTGCTATTAACAATCGCCATACTGTTTATTTACCGTACGGTGTAAATTCTCTG
GTTGGTTATTTTTTGATCGGGTG--ATTAGCGGCTCTGTTTTTCCCACAGGTGTTTGCAGTTTGGTGATAGGGACGCTGG
TCACCTGGTGTTCTAGCCTGGCCGTTGCCTCGCTGTGGCAGTGGAACGGGGAGAAGCACACCAGCTACCGGCTGCTCGCA
CAAAGCATATTTGGTCAGTGCAATTTTCC--TCCAACAAATAG---TAGTTCTTACCATCTGACGAATACTGTAACTGCA
GAAACCTTTTTTATTGTTGCAAAAGAAAGTTGCTGAGAGAAATGCTCTTTTGATCATTTAACTGCAATTCTCGTCAATGG
TGCACTTATGATTCAACATCGACTGTTAAGTGTTAACAGCACAATAGTTGGTGAAAATTTACCTTGAG-AGTGACTCTGT
ACTTTGTTGATCAGGTCCATGGGGCTACTGGTATGTGTCGTTCTTCCAGCAAGTGGCGTCGGTTGGCAACAACATTGCGA
TCCAGATTGCGGCCGGCAGCAGCCTCAAGGCCGTCTACAAGCACTACTACGCCGCCGACCATGGCGCGATGACGCTGCAG
CACTTCATCCTCCTCTTCGGCGCGTTCGAGCTGTTTCTCTCGCAGCTTCCCGACATCCATTCGCTCCGGTGGGTGAATGC
TACCTGCACTGCGTCCACCATTGGGTTTGCCGGGACAGCCATCGGTGTCACGATATACGATGGTAAAATTCAGTAAATTT
TCAT----CATA----AAGTACTGAAATTGCTGAAGATATGAAACAATCTGACAGCATCCTCTGCTGGCTACCGCACTAC
CGCAGGATATCGGGTTGACCGAAATGATGTTGGCTACAGCCTGCAAGGAAGCACCGGAACTAAGGTCTTCAGAGGTTTCA
ATGCACTGGGCACAATAGCCTTCTCATTTGGTGATGCAATGCTGCCAGAAATCCAGGTGCCCACCTGAAAATTCAGTTGA
TGTATCGATGAATTAAGTGTACAATCAATCATTCCTTGTGTAAAACTGGCTGAAATGCAGAGCACCGTGCGAGAACCGGC
GACGACAAACATGTACAAGGGTGTCTCGACGGCGTACACATTGATCGTCGTGTCCTACTGGACACTGGCATTCAGTGGCT
ATTGGGCATTTGGCTCTGAAGTCCAGCCATACATCTTGTCCTCCCTGACTGTCCCAAGATGGGCAATTGTAATGGCAAAC
ATATTTGCAGTCATTCAGATCACAGGTTGCTTTCAGGTAACTGTAACTTATGGCAAACGTGCTACTTCCATCAGAAGTTT
CTTGGCAACCATCCAGTAACTAACTGTACCTCT------TCTTCACAAAGATATACTGCAGGCCGACATACGCGCACTTT
GAAGAGCGCATTCAGGCGAAGAACACGGCGTACAGAGCATGGCTGTGGCGACTGATGTACACCTCTGCATACATGGCGAC
GATCACCCTTGTTGCTGCCGCAATGCCATTCTTTGGGGACTTTGTATCAGTTTGTGGAGCGGTTGGGTTCACCCCACTGG
ACTTTGTGCTGCCTGCATTGGCATTTCTCAAGGCCGGGAAGCTGCCCAAAAACCTGGGCCTGCGGCGTACTGTCAAGGCC
CTTTGCTGCTCCGGCGCCGTCTTGTTCTCTGTCATCGGAGTTCTTGCGTGCACTGGCGCCATCAGAGCAATTGCGCTCGA
TGTCAAGACCTACAAGTTCTTCCATGACATGTGATCATAGTTAAGTTATATCAGGTTGCTCT-GTGCATCAGTTCATTTA
GATGTAGGTTTGTTTGTGCCAGTGTTAGATGCCAGGTAGTAATATGCAATGTCATATACAATAGTACATGGGGACTCATT
TTGTAAGTTGAGTCACATTTTTGAAACATATATAGGATCAGAATCAAAACACAGACATCTCAGACATCTCAGAC------
--------------------------TTCGATGACCACAGAAATCGACTTACAATTCAT-GAAAAAAGATATCAAGAAAG
CAACGAATAAGCATACCACTGTAATAGAAGAACCTAGAGCAAAGCATACATGATGGATGCTGTCATATAAATCATGACAT
CA------------------------------------------------------------------------------
------TACATAACAATAGTGCATTTCCTTCTAAACACAAAGTGTAGGACTAGGACACATTAAATTTCGTCAAGAATTGA
TTCTCATATTGAACTGAGCA---------------TTCTAAGGTCCGACAACCTAGTGGTGTGAAATCTGTCTTCTGCAA
ACTCCTCTGACAATTTCAGGTCAATGCCTGCAACAGCATTGACACCGAACCTTTTCACCCTGTCACTGAGAAGAACTGTT
ATTATAGAGTCTGAGATATGGCTGGGTGCACCAGAAACAACCTTGAAGAGGGCCTCTCTCGGCAAAATCGGCTGTGCGGT
CGGTACTTACTACCATGCCAAGGTAGTAGATGAGAACTTCATTCATGTAGCCATGTGCATGTTCTGGAGTTTCCTCTGCT
GTTCAATTGATGCTGGTCAA---CAGCCTAAATTCATCAATCTTAGAATTGGCCAAGGTTTGTGAGGTGAATGAGGAGAA
AGGTTTCATGTGAA--TTTGTGTCTTACTCATATAAAATTGGGCTGCTGCAAATGGTTTCAAATAAATTAAATTAAATCA
TACCAGCTGGAAA-ACATTTTGAAAACTGCCACTTTCCTGGTCCCAAATGTCACTACTGCTAAATTTGGTCTAAATATCA
TGGTCAAGTGTCGAGACAGACACCTCCCTTTAATATTAGGTAGAGACAGATAT
>chr3D_773
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CTTGGAAAGAAGCGGTTAGTTTTTGTTT
TCCCATTCCAAAGCATGTATTCCGTTTCCACGCTACTCCAATCCAATACGAGCCCATCTTTCTCCTCTTCTGGCTTCTGC
TCTTCGATCGGTGCAGAAACCGCCTACGTCAACACAAGATAAGAGGCGTGACATAAGCTACTGGATCACTCGCTCTCAAG
CTCTTCTTACTCCA-----AAGTCCAGTGAAGAGAAGCAGCAGCAGTGGGCATGTCGCCGGCGACGGCGAGAGGCGGTGC
CCAGGAGGACTACCAGCCCGGCGAAGCCGGCGTGGACAAGGACGGCGGCGCCAAGGAAGGGAAGGGCACGTGGAGACACG
CGGCGTTCCACGTGGCGACGACGATCGCCACGCCGGCAGCCTACGCTCCCCTGCCCTTTGCTCTTGCATCCCTGGGCTGG
CCTCTGGGTTAGCAGCG------------------------------------------CCATATGGTGTAGATTCTCTG
GTTGGTTATTTTT-GATCGGGTG--ATTAGCAGTTCTGTTTTTCCCACAGGTGTTTGCTGCTTGGTGATAGGGACGCTGG
TCACCTGGTGTTCGAGCCTGGCCGTTGCCTCACTGTGGCAGTGGAACGGAGAGAAGCACACCAGCTACCGGCTGCTCGCA
CAAAGCATATTTGGTCAGTGCAATTTTTTCTTCCAACAAATAGT---------TACCATCTGACGATACTGTTAACTGCA
GAAACCTTTTTTATTGTTGCAAAAGAAAGTTACTGAGAGAAATGTTCTTTTGATCATTTAACTGTAATTCTCATCAATGG
TGCACTTATGATTCAACAAGC------AACTGTTAACATCACATCAGTTTGTGAAAATTTACCTTTGATAGTGACTCTGT
ACTTTGTTGATCAGGTCCATGGGGCTACTGGTATGTGTCATTCTTCCAGCAAGTGGCCTCGGTTGGCAACAACATTGCGA
TCCAGATTGCGGCCGGCAGCAGCCTCAAGGCCGTCTACAAGCACTACTACGCCGCCGACCACGGCGCGATGACGCTGCAG
CACTTCATCCTCCTCTTCGGCATGCTCGAGCTGTTTCTCTCGCAGCTTCCTGACATCCATTCGCTCCGGTGGGTGAATGC
TACCTGCACTGCTTCCACCATTGGGTTTGCAGGGACGGCCATCGGTGTCACGATATACGATGGTAAAATTCAGTAAATTT
TTATTCTGCATACATAAAGTACTGAAATTACTGAAGATGAAAGGAATCGACG--GCAT---------------CCTCTAC
TGCAGGATATCGGATTGACCGAAATGATGTGGGTTACAGTCTGCAAGGAAGCACCGCAACCAAGGTCTTCAGAGGTTTCA
ATGCATTGGGCACAATAGCCTTCTCATTTGGTGACGCAATGCTGCCAGAAATCCAGGTGCCCATCTGAAA-TTCTGTCC-
-ATATCGATGAACTTAGTGTACAAACAATCATTGTTTGCATAAAATTGGCTGAAATGCAGAGCACTGTGCGAGAACCGGC
AACAACAAACATGTACAAGGGTGTGTCGACGGCGTACACATTGATCGTCGTGTCCTACTGGACACTGGCATTCAGTGGCT
ATTGGGCATTCGGCTCTGGAGTCCAGCCATACATCTTGTCCTCCCTGACCGTTCCAAGATGGGCAATTGTAATGGCAAAC
ATATTTGCAGTTGTTCAGATCACAGGTTGCTTTCAGGTAACTGTAACTTATGGCAAACCTCCTACTTCCATCAGGAAATT
CTTGCCAACCATCCAGTAACTAACTCTACTTCTTCTTCTTCTTCACAAAGATATACTGCAGGCCGACATACGCGCACTTC
GAAGAGCGCATTCAGGCGAAGAATATGGCGTACAGAGCATGGCTGTGGCGACTGATGTACACCTCTGCATACATGGCGAC
GATCACCCTTGTTGCCGCCGCAATGCCATTCTTTGGGGACTTTGTATCAGTTTGTGGAGCGGTTGGGTTCACCCCACTGG
ACTTTGTGCTGCCTGCATTAGCATTTCTGAAGGCTGGGAAGCTGCCCAAAAACCTGGGGCTGCGGCGTACCGTCAAGGCC
CTTTGCTGTGCCGTCGCCGTCTTGTTCTCTGCCATCGGAGTTCTTGCATGCATTGGAGCCATCAGAGCAATTGTGCTCGA
CGTCAAGACCTACAAGTTCTTCCATGACATGTGATCATAGTTAAGTTATATCAGGTTGCTCTTGTGCATCAGTTCACTTA
TATGTAGGTTTGTGTGTGGCAGTGCTAGATGCCAG---GTAATATGCAATGTTATATACAATAGTACATGGGGACTCATT
TTGTAAGTTGAGTCACATTTTTGAAACATGTATAGGATCAGAATCAAAACACAGACATCTCAGACCAATC---AGTAAGT
CTATAATCTATTGCCTACAAAAACAATTCGATGACCACATAAATCGATTTACAATTCCAGGAAAAAAGATATCAAGAAAG
CAACAAATAAGCATACCACTCCAATAGAAGAACCTAGAGCAAAGCACACATGATGGATGCTGTCATATAAATTATGAACA
TCATACTCCCTCCGTAAAGAAATATAAGAGCGTTTACATCACTAAAGTAGTGATCTAAACGCTCTTATATTCCTTCACAG
AGGGAGTACATAACAATAGTACAGTTCCTTCTAAACACAAAGTGTAGGACTAGGACACATTAAATTTCGCCAATAATTTA
TTCTCAATCTTAGAATTGGCCGAGGTTTGTGAGGTG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AACAGCAGCCTAAATTCATCAATCTTAGAATTGGCCGAGGTTTGTGAGGTGAATGAGGAGAA
AGGTTTCACGTGACAGTTTGTTTATTGCTTGTACAAAATTGGGCTGCTGCAAATGGTTTGGAAGAAATAAAATTAAATCA
TACCAGCTGGAAA-ACATTTTGAAAACTGCCACTTTCCTGGTCCCAAATGTCAGTACTGCTAAATTTGGTCTAAATATCA
TGGTCAAGTGTCGAGACAAACACCTCCCTTTAATATTAGGTAGAGACAGATAT
>chr3B_1228
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------CGCCATACTGTTTATTTACCATATGATGTAAATTCTCTA
GTTGGTTTTCTAT-GGATCCGGTGAATTAGCAGCTCTGTTTTTCCCACAGGTGTTTGCAGCTTGGTCATAGGGACACTGG
TCACCTGGTGTTCTAGCTTGGCCGTTGCCTCGCTGTGGCAGTGGAACGGAGAGAAGCACACCAGCTACCGGCTGCTTGCA
CAAAGCATATTTGGTCAGTGCAATTTTTTCTTCCAACAAATAGTACTAGTTCTTACCATCTGACGA----------TGCT
GTAACTTTTTTTATTGTTGTAAAAGGAAGTTACTGAGAGAAATGTTCTTTTGATCATTTAACTGTAATTCAAATCAATGG
TGCACTTATGATTCAACATCC-------ACTGTTAACAGCACAATAGTTTGTGAAAAATTACCTTGAG-AGTGACTCTGT
ACTTTGTTGA--AGGTCCCTGGGGCTACTGGTATGTGTCATTCTTCCAGCAAGTGGCGTCGGTTGGCAACAACATTGCGA
TCCAGATTGCGGCCAGCAGCAGCCTC-AGGCCGTGTACAAGCACTACTATGCCACCGACCATGGCGCGATGACGCTGCAG
CACTTCATCCTCCTCTTCGGCGCGCTCGAGCTGCTTCTCTCCCAGCTTCCCGACATCCATTCGCTCCGGTGGGTGAATGC
TACCTGCACTGCCTCCACCATTGGGTTTGCTGGGACAGCCATCGGTGTCACGATATATGACGGTAAAATTCAGTAAATTT
TCATTCTGCATA----AAGTACTAAAATTGCTGAATATATGAAAAAATCTGACAGCAT---------------GCTCTAC
CGCAGGATATCGGATTAACCGAAATGATGTTGGTTACAGTCTGCAAGGAAGCACCGCAACCAAGGTCTTCAGAGGTTTCA
ATGCACTGGGCACAATAGCCTTCTCATTTGGTGATGCAATGCTGCCAGAAATCCAGGTGCCCACCTGAGA-TTCAGTTGA
TATATTGATGAATTAAGTGTGCAATCAACCATTCTTTGCGTAAAACTGGCTGAAATGCAGAGCACCGTGCGAGAACCGGC
GACGACAAACATGTACAAGGGTGTTTCGACGGCGTACACATTGATCGTCATGTCCTACTGGACACTGGCATTCAGTGGCT
ATTGGGCATTCGGCTCCGGAGTCCAGCCATACATCTTGTCCTCTCTGACTGTTCCAAGATGGGCAATTGTAATGGCAAAC
ATATTTGCAGTTGTTCAGATCACAGGTTGCTTTCAGGTAACTGTAACTTATGCCAAACCTCCTACTTTCATCAGGAATTT
CTTGGCAACCATCCAGTAACTAACTCTA------CTTCTTCTTCACAAAGATATACTGCAGGCCGACATATGCGCACTTT
GAAGAGCGCATTCAGGCAAAGAATATGATGCACAGAGCATGGCTGTGGCGACTGATGTACACCTCTGCATACATGGCGAC
GATCACCCTCGTTGCCGCCGCAATGCCATTCTTTGGGGACTTTGTATCAGTTTGTGGAGCGGTTGGGTTCACCCCACTGG
ACTTTGTGCTGCCAGCATTGGCATTTCTCAAGGCTGGGAAGCTGCCCAAGAACCTGGGACTGCGGCGTACTGTCAAGGCC
CTTTGCTGCGCCGGCGCCGTCTTGTTCTCTGTCATCGGGGTTCTTGCATGCATTGGCGCCATCAGAGCAATTGCGCTCGA
TGTCAAGACCTACAAGTTCTTCCATGACATGTGATCATAGTTAAGTTATATGAGGTTGCTCTTGTGCGTCAGCTCACTTA
GATGTAGCTTTTTTTGTGTGAGTGCTAGATGCCAGGTA-TAATATGCAATGTTATATACAATAGTACAATGGGACTCATT
TTATAAGTTGAGTCACATTTTTGAGACATATATAGGATCAGAATCAAAACACAGATATCTCATACCAATCCGAAGTAAGT
CTATAATCTATTGCCTACAAAAACAATTCGATGACCACATAAATCGACTTACAATTCCAGGAAAAAAGATATCAAGAAAG
CAACAAATAAGCATACCACTGCAATAGAAGAACCTAGAGCAAAGCATACATGATGGATGCTGTCATATAAATTATGAACA
TCATAC--------------------------------------------------------------------------
---------ATAACAATAATGCAGTTCCTTCTAAACACAAAGTGCAGGAC----------TAAAATTCGTCAAGAATTGA
TTCTCATATTGAACTGAGCACAAGCAGTTTATGTATTCTAAGTTCCGACAACCCAGTGGTGTGAAATCTGTCTTCTGCAA
ACTCCTCTGACAATTTCAGGTAAATGCCCACAACAACATTGACACCGAGCCTTTTCACCCTGTCACTGAGAAGAACTGTT
ATTGTAGAGCCTGAAATGTGGCTGGGTGCACCAGAAACGACCTTGAAGAGGGCCTTGCTCGGCAAAATCGGCTGTGCGGT
CGGTGCGCCAGAAACGACCTTGAAGAGGACCTTG-----------------------------------------CTGCT
GTCCAATTGATGCTGGTAAACAGCAGCCCAAATTCATCAATCTTAGAATTGGCCGAGGTTTGTGAGGTGAATGAGGAGAA
AGGTTTCATGTGACAGTTTGTGTCTTACTCATATAAAATTG--CTGCTGCAAATGGTTTCAAAGAAATTAAATTAAATCA
TACCAGCTGGAAAAACATTTTGAAAACTGCCACTTTCCTGGTCCCAAATGTCAGTACTGCTAAATTTGGTCTAAATATCA
TGGTCATGTGTCGACACAGACAGCTCCCTTTAATATTAGGCAGAGACAGATAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S-----S---S
-S----S----------------S------------------SSS-S-S---S------------S----S-SSS-SSS-
-------------------------SS--------S---------------------SS-SS-----------S------
---------S-S-SSSSSS---------------S---------------------S-----------------------
----------------S------------------------------S----S---S------------------S----
-----S--------------------------------------------S----------S--S------S--------
---------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S--S---------------
-------------S-----------------S----------------------------S-------------------
-------------------------------------------------S------------------------------
---------------------------SS-------------------------------------SSSSSS--------
-------------------------------S------------S-------------------S-------S-------
--------------------SSSSSSS--S-------------------S------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
------------S-----------------S-------------------------------------------------
--------------------------------------------S-------------SSSSSSSSSSSSSSS--S----
-------------S-------------------S-----S----------------S---S-------------------
----------------------------------------------------------------------S---------
-S--------------------------------S---S-----------------------------------------
------------------------S-------------------------------------------------------
----------S-------S---------------------------------S---------------------------
-----------SS---------------------------------------------S-S-------------S-S---
-------------------------S---S--------------------------------------------------
-----------------------S-S------------------------------------------------------
---------------S----------------------------------------------------------------
----------------------------------S-----------------------S---------------------
---------S-------------------------------------S----S---------------------------
----------------------------------------------------------------------------S---
------------------S-----S---------------------------S---------------------------
-----------------------------------------------------------------SSS--S--S------
---------------------------------------S-----------------SS---------------------
----S----------------S--------------------------------------------------S----SSS
SS------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
------------------------------------------S----------S--------------------------
---------------------S------SS-----S------------S-------------------------------
---S-----S----S--S--------------------S----------------SS-----------------------
----S-SSSSS-SSSSS--SS-SSSSSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
--S--------------S------------------------------------S-------------------------
-------------S-------------------------------------------------S----------------
-----------------------------------------------------S--------------------------
-----------------------------------------------------
>forward_873
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CCATCTTTCTCCGCTTCCGT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2076
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACTAC
CGCAGGATATCGGGT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1214
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GGCTGG
CCTCTGGGTAAATT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2114
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------CTACAGCCTGCAAGGAAGCA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TTCCCACAGGTGTTTGCAGT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2345
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------CTCGACGGCGTACACATTGA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1720
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GGGGCTACTGGTATGTGTCG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_3809
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------AGCCATGTGCATGTTCTGGA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
