>input_sequence_40329
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---------------------------------ATGAGCAAGGAGGATGTGCTCAAGATACAGGTGAGTTCTTCCTTGCT
TTGCTTCCTCTCGACTGAAGACATTCCCCCGCATGTTCCTTCTTGTTTCTGCCGCCATGAAATTTTTGTGAGGTTGCTTG
CTTGCTTGCTCCTGTGTCTGATCCGTGCATGCTGTCCGTGTGTGTTTGTTTGTTCGTCCCCGAATCCGCAGACCTGCGTG
CTCAAGGTGAACATCCACTGCGACGGGTGCCAGAAGAAGGTGAAGAAGATCCTCAGCAAGATCGATGGTAAATAATAC--
TAGATGCACTTCTGTTTATCCGTGTTGTT--TTGTTGTTCGACCGTGGGGATAATGTGTTGGATTCATCCATCTTGTTTT
GCAGGCGTGTACCAGAGCACCATCGACCCGGAGGAGGGCAAGGTGATGGTGTCCGGACTCGTGGATCCGGACACCATCAT
TAAGAAGCTCAACAAGGGCGGCAAGCCCGCTGTGCTCTGGGGCTCCAAGCCCGCCGGCGTCGCCAATCAGTTCCAAAAGC
TCAACCTCGACGGTAGCGGCGGCGGTGGTAAGGGCCAGCAGCCCAAGGAC---------------------------GCC
GGCGGCAAGGCCCACAAGGGCGGCGGCAAGGACGCCAAGATGGCGATGCCGCAGCCGACCCCGCAGCAGATTCAGCAAAT
GCAGCAGCAGATGCAGATGAAGGGCGCGCCGACGCCGCAGCAGCTTCAGCAGCTGCAGCAGCAGATGCAGATGAAA----
--------------------------------------------------GGTGCGCCCACGCCGCAGCAGCTCCAGCAG
CTGCAGCAGCAGATGCAGATGAAGGGCGCGCCGACGCCGCAGCAGATGCAGCAGCTGCAGCAGCAGATGCAGATGAAGGG
CGCGCCCACGCCGCAGCAGCTCCAGCAGCTGCAGCAGCAGATGCAGATGAAGGGGCTGAAGCTGCCGCCCCAGTTCATGG
GCGGCGCCCCGGCCAAGATGCCGTTCCCGGCGGGTGCGCCGGCCAAGGACCCCAAGTCCGTCAAGTTCAACCTCCCCGAG
GACGGCTGGGGCGACGACGGCGGCAGCGAGTTCGACGACGAGTTCGACGAATTTGACGACGACGAAGATTACGACGATGA
GGGCTTCGAAGACGACTACTACGACGACCCCAAGATGATGATGAAGCAGATGGCCATGCCGCCGAACGCCGGCGGGGGCG
ACAAGAAGGGCGCCGGCAATGGTGGGAAGAAGGGCGGTGGAGGAAACG---------AGATCCCGGTGCAGATCAAGGGC
AACGGCAACAACGGCGGC------------------GGCAAGAAAGACGCGGGTGGCAAGCAGCAGCACCAAGGT-----
-GGGAA---CGGCAACGGCAACGGCGGGGGTAAGAACGGAGGCGGTGGTGGGCAGCCGAACAACGTCAAGGGAGGAGGAG
CGCCGGTCCAG------------------------------GGGAAGAAGGGCGGCGGCGCTGGTGGCCCGGCCCCAGGC
ATGGGTGGCCCGATGGGGGG---CGGCATGCCGCCGCCGCAGCAGGCCATGTTCAGGCCTAACATGATGGGCGGCGCCGG
TTTCCC---CGGCATGGGC---------GGTCCAATGGGCCACCCGCACGCGGCGAGCGGCGCGCAGGCTGGCCGCGCCA
TGCAG------------------GGCATGCCGCCGGCTGGGGTTTACCAG---GGCGCTGGCGGCGGCGGCGGCGGCGGC
ATGCCGTCCGGC---GCGGAGATGCTGCAGGCTGCCGCGGCGGCCGGGAACCCCATGGCGCAGCAGCAGTACATGCAACT
GATCCAGCAGCAGCAACAGCAGCAGCAGATGGCAATGCTGCAGCAGCAGCAGCAGCAACAACAACAA------ATGATGA
TGATGA---------------------------ACGGCGGCCACGGCGGCGGCGCGGGAGGGTACCCGCAGATGGGCTAC
GGGCCAGGGTACGGGCGCCCGCCGATGGGCTCGTACCCAATGCCAACCGCCTATGCGATGCCGCCGCAGCCACCAGCGGG
---GGAGCCTTACAACTACTTCAGCGACGAGGACCCCAACAGCTGCTCGGTGATGTGA----------------------
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>chr4A_1_TraesCS4A01G184700
ACCGAGAAAA--AAAAAGTAACCGCCACATGCATTCTGTCACTTTCACTCTCGTCACCGACAATAGAAATGTATCGGTCA
TACGTCACATGTATTTTAGCACGATAACATGGCAACTCATTCATATGAATTAGTATTTATTAACCACGTCAAAATTTTAC
GGTCAAAACACACGTCTTCGTCCCGTGCTACACTGCCCTTGGCAAACCATGTACCGTATGAACTTTTTAACCTCTTAGCC
----AACGAAGGACCTAACGGCGTATTTGCCCCGTTGGACGGTGGGTACTCACGGCCGTCCACAGAGCC---CCCTCTCT
CCGGGTCTAAAATTGGCAGGAGAACAAGACAAATAAAAGGTGGCTAAAGAATTGGCAGCGGACCCGTGTGGACTGCTTTT
TAG-------AAAAAACTGAACCGACATTGGTAACCGCAGTTATTATAAAGCCCCGGGGTACCACCTCACATGTTCAGCC
TCTGTCTCTGCTCACTGACCGGTCCATGTTTAGCAACTCTGATCCATATTTAGTTGCTACTAATACTAGTAATTGATTGA
GGGAGAGCAAAAGCGAAAGGCTTCCAATCCATCCA-----TCCCCAAAGCCCAAAGAGTAGCTAGAGGAATAAATCTTGA
AAAGGGTAAAGAGTAATTTCCTTCCTAGCTTTGCACAAGATAGAGATAGAGAGAGAGAGAG-------------------
CCTCCGCCGCTCCCCTATTAATTTCCTTCTAGTTTTCTGCAGGCACACACTCTGATAAGAAGCCCCTCCCCCCTCCTCCC
TCC------------AGCACTCGCTCTTTGTGTGAGTGTGGGACGGGACACTTATTATATTATCTTCACCGAGAAGCCAG
TTCCTCCTTCTCTCGCTCGCCCTCTCACACACTCACACTGCGGGAGAGAGATGGAGCGCAATGTTTCCTGGTAGCTGCCT
TCTCCCTGCTCTCCTCCCCCTGATTTGAGGCCTCCCTCCGCGTCCGTTTCCTCTGCGCCAGATCTGCGTTCGTC------
---------------TCGGCCGGGAAGTCAGCCATGAGCAAGGAGGATGTGCTCAAGATACAGGTGAGTTCTTCCTTGCT
TTGCTTCCTCTCGACTGAAGACATTCCCCCGCATGTTCCTTCTTGTTTCTGCCGCCATGAAATTTTTGTGAGGTTGCTTG
CTTGCTTGCTCCTGTGTCTGATCCGTGCATGCTGTCCGTGTGTGTTTGTTTGTTCGTCCCCGAATCCGCAGACCTGCGTG
CTCAAGGTGAACATCCACTGCGACGGGTGCCAGAAGAAGGTGAAGAAGATCCTCAGCAAGATCGATGGTAAATAATAC--
TAGATGCACTTCTGTTTATCCGTGTTGTT--TTGTTGTTCGACCGTGGGGATAATGTGTTGGATTCATCCATCTTGTTTT
GCAGGCGTGTACCAGAGCACCATCGACCCGGAGGAGGGCAAGGTGATGGTGTCCGGACTCGTGGATCCGGACACCATCAT
TAAGAAGCTCAACAAGGGCGGCAAGCCCGCTGTGCTCTGGGGCTCCAAGCCCGCCGGCGTCGCCAATCAGTTCCAAAAGC
TCAACCTCGACGGTAGCGGCGGCGGTGGTAAGGGCCAGCAGCCCAAGGAC---------------------------GCC
GGCGGCAAGGCCCACAAGGGCGGCGGCAAGGACGCCAAGATGGCGATGCCGCAGCCGACCCCGCAGCAGATTCAGCAAAT
GCAGCAGCAGATGCAGATGAAGGGCGCGCCGACGCCGCAGCAGCTTCAGCAGCTGCAGCAGCAGATGCAGATGAAA----
--------------------------------------------------GGTGCGCCCACGCCGCAGCAGCTCCAGCAG
CTGCAGCAGCAGATGCAGATGAAGGGCGCGCCGACGCCGCAGCAGATGCAGCAGCTGCAGCAGCAGATGCAGATGAAGGG
CGCGCCCACGCCGCAGCAGCTCCAGCAGCTGCAGCAGCAGATGCAGATGAAGGGGCTGAAGCTGCCGCCCCAGTTCATGG
GCGGCGCCCCGGCCAAGATGCCGTTCCCGGCGGGTGCGCCGGCCAAGGACCCCAAGTCCGTCAAGTTCAACCTCCCCGAG
GACGGCTGGGGCGACGACGGCGGCAGCGAGTTCGACGACGAGTTCGACGAATTTGACGACGACGAAGATTACGACGATGA
GGGCTTCGAAGACGACTACTACGACGACCCCAAGATGATGATGAAGCAGATGGCCATGCCGCCGAACGCCGGCGGGGGCG
ACAAGAAGGGCGCCGGCAATGGTGGGAAGAAGGGCGGTGGAGGAAACG---------AGATCCCGGTGCAGATCAAGGGC
AACGGCAACAACGGCGGC------------------GGCAAGAAAGACGCGGGTGGCAAGCAGCAGCACCAAGGT-----
-GGGAA---CGGCAACGGCAACGGCGGGGGTAAGAACGGAGGCGGTGGTGGGCAGCCGAACAACGTCAAGGGAGGAGGAG
CGCCGGTCCAG------------------------------GGGAAGAAGGGCGGCGGCGCTGGTGGCCCGGCCCCAGGC
ATGGGTGGCCCGATGGGGGG---CGGCATGCCGCCGCCGCAGCAGGCCATGTTCAGGCCTAACATGATGGGCGGCGCCGG
TTTCCC---CGGCATGGGC---------GGTCCAATGGGCCACCCGCACGCGGCGAGCGGCGCGCAGGCTGGCCGCGCCA
TGCAG------------------GGCATGCCGCCGGCTGGGGTTTACCAG---GGCGCTGGCGGCGGCGGCGGCGGCGGC
ATGCCGTCCGGC---GCGGAGATGCTGCAGGCTGCCGCGGCGGCCGGGAACCCCATGGCGCAGCAGCAGTACATGCAACT
GATCCAGCAGCAGCAACAGCAGCAGCAGATGGCAATGCTGCAGCAGCAGCAGCAGCAACAACAACAA------ATGATGA
TGATGA---------------------------ACGGCGGCCACGGCGGCGGCGCGGGAGGGTACCCGCAGATGGGCTAC
GGGCCAGGGTACGGGCGCCCGCCGATGGGCTCGTACCCAATGCCAACCGCCTATGCGATGCCGCCGCAGCCACCAGCGGG
---GGAGCCTTACAACTACTTCAGCGACGAGGACCCCAACAGCTGCTCGGTGATGTGAGAG---ATGGATCGC-GCCACC
GCCGCTCATGTTCATGGTTGGAAGGAAGACCATGATGAATCTGGCAGTGGCAATGACATGGGGCAACAACAAGTCCCATC
TAGATCGTTTCTTCTTGATTAATTTAGCTTCTACATTTTCGCCTTTTATTTCAAGCTAAAAAAGAACAAGAGTTGTGAGA
CTTGCTTGAAGGCGATTGTAGGTACAGTAATTATCTATAGATGTCATAAGAGATGAATGCTCCATGCTGTTACAGTTGAA
GAACAATGTGATTGACTGATGGTAGATCAATGAACAGTATGCAAAATAACTCTGGTGTCAATGTTGTGGC-TTGTGTTTA
CATTCTGCGTTG-----GTATGACTGAAAGGTGAGATGTCCAGAAGTAACGACAGTAGACATGTAGAAAGGG-ATATGTG
CTTGATGCCATCGAGGAATGCTTCACACTGGATGGCAGTCAGCTACATCTTCTCAACCAAGCTTTTCTGCTCCTCCTTCC
TAAGAAAGACTCCTCACTGGACTTAGAGGCTGTTTGGTTTGTGACTAAGATTGCCACACCTAAGGTTAGGCAAGTTTGAC
CAACTTAGATGAGTGTTTGGTTCAAGCCACACCTTAGACAAGCCACACTTGGGCCCCACATGACATACACTCAAAACGTG
TGACAAGATTTGCTTAGGCTTGCCAACTTATGGCTCTCATTTTGATGAACTAACCTTAGGCAAGCTTGGCAAAAATGTGT
GACAAAATGTGGCAATGCTAGTCCTAGAACCAAACAGCCCCTTAGCCAATTTCCGCCCGATAAGCCACAAGCACGGCTTC
CCCAAGCTTGTTGCAAAGGTGCTCGCCTTAGCCGATTTCTTCCCGATAAGCCTTGTGCACAGCTTGCCCAAGCTTCTCGC
AAAGGTGATCGTCTGATAAGCCTTGTGC--------------ACAACTTCCTCAAACTTCTTGCAAAGGTGCTCACGAAT
CGACTAGCCCAACGTCTCTATGAGCTCATCTCGTCCCCAAAGA
>chr4B_1
ACCGACAACAACAAAATGTAACTGTCACATGCATTCTCTCACTTTTACTCTCAGCGCCGACAATAGAAATGTATCGGTTA
TGCGTCACATGTATTTTAGCACAATAACATGGCAACTCATTCGTATGAATTA----------ACCACGTCAAAAAATTAG
GGTTATAACACACGTTTCCGTCCCGTGCTACACTGCTCTTGGCAAACCATGTACCGTATGAACTTTTTAACCTCTTAACC
AACGAACGAAGGACCTAACGGCGTATTCACCCGGTTGGACGGTGGGTACTCAGGGCCGTCCACAGAGGGAGCCCCTCCCT
CCGGGTCTTGAATTGGCAGGAGAACAAGACAAATAAAAGCTAGCTAAAGAATTGGCAGCGGACCCGGGTAGACTGCTTTT
TAGAAGAAAAAAAAAACTGAACCGACATTGGTAACCGCAGTT-TTATAAAGCCCCGGGGTACC---TCACATGTCCAACC
TCTGTCTCTGCTCACTGACCGGTCTATGTTTAGCAACTCTGATCCATATTTAGTTGCTACTAATACTAGTAATTGATTGA
GAGAGAGCAAAAGCGAAAGGCTTCCA----ATCCA-----TCCCCAAAGCCCAAAGACTCA----AGGAATAAATCTTGA
AAAGGGTAAAGAGTAATTTCCTTCCTAGCTTTGCAGAAGATAGAGACAGAGAGTAGAGAGAGAGTGCCCTCTCTCTCCTT
CCTCCGCCCCTCCCCTATTAATTTCCTTCTAGTTTTCTGCAAGCACACACTCTGATAAGAAGCCCCTCCCCTCTCCTCCC
TC-------TCTCCAAGCACTCGCTCTTTGTGTGAGTGTGGGACGGGAAAGTTATTATATTATCTTCAGCGAGAAGGCAG
TTCCTCCTTCTCTCGCTCGCCCTCTCACACACTCACACTGCGGGAGAGA--TGGAGCGCAATGTTTCCTGGTAGCTGCCT
TCTTCCTGCTCGCCTCCCCCTGATTTGAGGCCTCCCTCCGCGTCCGTTTCCTCTGCACCAGATCTGCGCTCCTCCTCC--
GTGGCCTGCTGCGTTTCGGTCGGGAAGTCAGCCATGAGCAAGGAGGATGTGCTCAAGATACAGGTGAGTTCTTCCTTGCT
TTGCTTCCTCTCGACTCAAGACATTCTCCCGCATGTTCCTTCTTGTTTCTGCCGCCATGAAATTTCCATGAGCTTGCTTG
TTTGCTTGCTCCGGTGTCTGATCCCTGCATGCCGTTCGTGTGTGTTTGTTTGTTCGTCCCCAAATCCGCAGACCTGCGTG
CTCAAGGTGAACATCCACTGCGACGGGTGCCAGAAGAAGGTGAAGAAGATCCTCAGCAAGATCGATGGTAAATAAT--AG
TAGATGGACTTCTGTTTATCCGTGTTGTTCTTTGTTGCT---CCGTGGGGATAATGTGTTGGATTCATCCGTCTTCTTT-
GCAGGCGTGTACCAGAGCACCATCGACCCGGAGGAGGGCAAGGTGATGGTGTCCGGGCTGGTGGATCCGGACACCATCAT
CAAGAAGCTCAACAAGGGCGGCAAGCCCGCTGTGCTCTGGGGCTCCAAGCCCGGCGGCGTCGCCAACCAGTTCCAGAAGC
TCCACCTCGACGGTAACGGCGGCGGTGGTAAGGGCCAGCAGCCCAAGGACGCCGGCGGCAAAGGCCATCCCAAAGATGCC
GGCGGCAAGGCCCACAAGGGCGGCGGCAAGGACGCCAAGATGGCGATGCCGCAGCCGACCCCGCAGCAGATTCAGCAAAT
GCAGCAGCAGATGCAGATGAAGGGCGCGCCGACC----------------------------------------------
--------CCGCAGCAGCTCCAGCAGCTGCAACAGCAGATGCAGATGAAGGGTGCGCCGACGCCGCAGCAGCTCCAGCAG
CTGCAGCAGCAGATGCAGATGAAGGGCGCGCCGACGCCTCAGCAGATGCAGCAGCTGCAGCAGCAGATGCAGATGAAGGG
TGCGCCGACGCCGCAGCAGCTCCAGCAGCTGCAACAGCAGATGCAGATGAAGGGGCTGAAGCTGCCGCCGCAGTTCATGG
GCGCCGCCGCGGCCAAGATGCCGTTCCCGGCGGGTGCGCCGGCCAAGGACCCCAAGTCCGTCAAGTTCAACCTCCCCGAG
GACGGCTGGGGCGACGACGGCGGCAGCGAGTTCGACGACGAGTTCGACGAATTTGACGATGACGAAGATTTCGACGACGA
GGGCTTCGAAGACGACTACTACGACGACCCCAAGATGATGATGAAGCAGATGGCCATGCCGCCGAACGCCGGCGGGGGCG
ACAAGAAGGGCGCCGGCAATGGTGGGAAGAAGGGCGGTGGAGGAAACG---------AGATCCCTGTGCAGATCAAGGGG
AACGGCAACAACGGCGGC------------------GGCAAGAAAGACGCGGGTGGCAAGCAGCAGCACCAAGGTGGCAA
CGGCAA---CGGCAACGGCAACGGCGGCGGTAAGAACGGAGGCGGTGGTGGGCAGCCGAACAACGTCAAGGGAGGAGGAG
CGCCGGTCCAG------------------------------GGAAAAAAGGGCGGCGGTGCTGGTGGCCCGGCCCCAGGC
ATGGGTGGCCCGATGGGCGG---CGGCATGCCGCCGCAGCAGCAGGCCATGTTCAGGCCTAACATGATGGGCGGCGCCGG
TTTCCC---CGGCATGGGC---------GGTCCAATGGGCCACCCGCACGCGGCGAGCGGCGCGCAGGCTGGCCGCGCCA
TGCAG------------------GGCATGCCGCCGGCTGGGCTTTACCAG---G------------GCGCTGGCGGCGGC
ATGCCGTCCGGG---GCGGAGATGCTTCAGGCTGCGGCCGCGGCCGGGAACCCCATGGCGCAGCAGCAGTACATGCAACT
GATCCAGCAGCAGCAACAGCAGCAGCAGATGGCAATGCTGCAGCAACAGCAGCAGCAG---CAGCAA------ATGATGA
TGGTGA---------------------------ACGGCGGCCATGGCGGCGGCGCGGGAGGGTACCCGCAGATGGGCTAC
GGGCCAGGGTACGGGCGTCCGCCGATGGGCTCGTACCCGATGCCAACCGCCTATGCGATGCCGCCGCAGCCACCAGCGGG
---GGAGCCTTACAACTACTTCAGCGACGAGGACCCCAACAGCTGCTCGGTGATGTGAGAGATGATGGATCGC-GCCACC
GCCGCTCA------TGGTAGAAAGGGAGACCATGATGAATCTGGCAGTGGCA-TGACATGGGGCAACAACAAGTCCCATC
TAGATCGTTTCTTCTTGATTAATTTAGCTTCTACATTTCCGCCTTTTATTTCAAGCTAAAAAGGAAAAAGAGTTGTGAAA
CCTGCTTGAAGGCGATTGTAGGTACAGTAATTATCTATAGATGTCATAAGAGGTGAATGCTCCATGCTGTTACAGTTGAA
GAACAATGTGATTGACTGATGGTAGATCAATGAACAGTATGCAAAATAACTGTGGTGTCAATGTTGTGTCTTTGTGTTTA
CATTCTGCGTTGCGTTGGTATGACTGAAAAGTGAGATGTCCAGAAGAAACGATAGTAGAAATGTAGAAAGGATATATGTG
CTTGATGCCATGGAGGAATGCTTCACACTGGCCGGCAGTCAGCTACATCTTCTCAACCAAGCTTTTCTGGCCCTCCTTCC
TAAGAAAGACTCCCCACTGGACTTAGACAATTTCCGCCCGATAAGCCTTGTGCACAGCTTTCCCAAGCTTCTTCTTGCAA
AGGTGCTCG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CCTTAGCCGATTTCCGCCCGGTAAGCGTTGTGCACAACTTC
CCCAAGCTTCTTGCAAAGGTGCTCGCCTTAGCCGATTTCTGCCCGATAAGCCTTGTGCACACCTTGCCCAAGCTTCTGGC
AAAGGTAATCTCCTTAGCT------------------------------------GCTTCTTGCAAAGGTGCTCACGAAT
CGACTAGCCCAACGTCTCTATGAGCTCATCTCGTCCCCAAAGA
>chr4D_16
-----------------GTAACGGTCACATGCATTCTCTTACTTTCACTCTTGGCACCGACAATAGAAATGCATCGGTCA
TGCGTCACATGCATTTTAGCACGATAACATCGCAACTC-TTCATATGAATTAGTATTTATTAACCACGTCAAAATTTTAC
GCTCAAAACACACGTTCTCGTCCCGTGCTACACTGCTCCTGGCAAACCATGTACCGTATGAACCTTTTAACCTCTAACT-
----AACAAAGGACCTAACGGCGTATTTCCCCGGTTGGACGGTGGA-ACTGACGGCCGTCCACAGAGCCAGCCCCTCTCT
CCGGGTCTAAAATTGGCAGGAGAACAAGACAAATAAAAGGCAGCTAAAGAATTGGCAGCGGACCCGTGTGGACTGCTTTT
TAG-------AAAAAACTGAACCGACATTGGTAACCGCAGTT-TTATAAAGCCCCCGGGTACC---TCACATGTTCAGCC
TCTGTCTCTGCCCACTGACCGGTCCATGTTTAGCAACTCTGATCCATATTTAGCTGCTACTAATACTAGTAATTAGTTGA
GAGAGAGCAAAAGCGAAAGGCTTCCA----ATCCAATCCATCCCCAAAGCCCAAAGACTATC--GAGGAATAAATCTTGA
AAAGGGTAAAGAGTAATTTCCTTCCTAGCTTTGCACAAGATAGAGATAGAGAGAGAGTGCCC----------CTCTCCTT
CCTCCGCCCCTCCCCTATTAATTTCCTTCTAGTTTTCTGCAGGCACACACTCTGATAAGAAGCCCCTCCCCCCTCTCCTC
TCTCTCCATTCTCCGAGCACTCGCTCTTTGTGTGAGCGTGGGACGGGACACTTATTATATTATCTTCACCAAGAAGGCAG
TTCCTCCTTCTCTCGCTCGCCCTCTCACACACTCACACTGCGGGAGAGA--TGGAGCGCAATGTTTCCTGGTAGCTGCCT
TCTTCCTGCTCTCCTCCCCCTGATTTGAGGCCTCCCTCCGCGTCCGTTTCCTCTGCACCAGATCTGCGCTCGTCCGTGGG
GTGGGCTGCTGCGTTTCGGTCCGGAAGTCAGCCATGAGCAAGGAGGATGTGCTCAAGATACAGGTGAGTTCTTCCTTGCT
TTGCTTCCTCTCAACTCAAGACATTCCCCCGCATGTTCCTTCTTGTTTCTGCTGCCATGAAATTTTTGTGAGG----TTG
CTTGCTTGCTCCTGTGTCTGATCCCTGCATGCCGTTCGTGTGTGTTCGTTTGTTCGTCCCCAAATCCGCAGACCTGCGTG
CTCAAGGTGAACATCCACTGCGACGGGTGCCAGAAGAAGGTGAAGAAGATCCTCAGCAAGATCGATGGTAAATAATATAG
TAGATGGAGTTCTGTTTATCCGTGTTGTT--TTGTTGTT---CCGTGGGGAGAATGTGTTGGATTCATCCATCTTGTTT-
GCAGGCGTGTACCAGACCTCCATCGACGCGGAGGAGGGCAAGGTGATGGTGTCCGGACTCGTGGATCCGGACACCATCAT
CAAGAAGCTCAACAAGGGCGGCAAGCCCGCTGTGCTCTGGGGCTCCAAGCCCGGCGGCGTCGCCAACCAGTTCCAAAAGC
TCCACCTCGACGGTAACGGCGGCGGCGGTAAGGGCCAGCAGCCCAAGGACGCCGGCGGCAAAGGCCATCCCAAAGATGCC
GGCGGCAAGGCCCAGAAGGGCGGAGGCAAGGACGCCAAGATGGCGATGCCGCAGCCGACCCCGCAGCAGATTCAGCAAAT
GCAGCAGCAGATGCAGATGAAGGGCGCGCCGACGCCGCAGCAGCTTCAGCAGCTGCAGCAGCAGATGCAGATGAAGGGCG
CGCCCACGCCGCAGCAGCTTCAGCAGCTGCAGCAGCAGATGCAGATGAAGGGTGCGCCGACGCCGCAGCAGCTCCAGCAG
CTGCAGCAGCAGATGCAGATGAAGGGCGCGCCGACGCCGCAGCAGCTCCAGCAGCTGCAGCAGCAGATGCAGATGAAGGG
TGCGCCGACGCCGCAGCAGCTCCAGCAGATGCAGCAGCAGATGCAGATGAAGGGGCTGAAGCTGCCGCCGCAGTTCATGG
GCGCCGCCGCGGCCAAGATGCCGTTCCCGGCGGGTGCGCCGGCCAAGGACCCCAAGTCCGTCAAGTTCAACCTCCCCGAC
GACGGCTGGGGCGACGACGGCGGCAGCGAGTTCGACGACGAGTTCGACGAATTTGACGACGACGAAGATTACGACGATGA
GGGCTTCGAAGACGACTACTACGACGACCCCAAGATGATGATGAAGCAGATGGCCATGCCGCCGAACGCCGGCGGGGGCG
ACAAGAAGGGCGCCGGCAATGGTGGGAAGAAGGGCGGTGGAGGAAACG---------AGATCCCTGTACAGATCAAGGGG
AACGGCAACAACGGCGGC------------------GGCAAGAAAGACGCGGGTGGCAAGCAGCAGCACCAAGGT-----
-GGCAA---CGGCAACGGCAACGGCGGCGGTAAGAACGGAGGCGGCGGTGGGCAGCCGAACAACGTCAAGGGAGGAGGAG
CGCCGGTCCAG------------------------------GGAAAGAAGGGCGGCGGCGCTGGTGGCCCGGCCCCAGGC
ATGGGTGGCCCGATGGGCGG---CGGCATGCCGTCGCAGCAGCAGGCCATGTTCAGGCCTAACATGATGGGCGGCGCCGG
TTTCCC---CGGCATGGGC---------GGTCCAATGGGCCACCCGCACGCGGCGAGCGGCGCGCAGGCTGGCCGCGCCA
TGCAG------------------GGCATGCCGCCGGCTGGGCATTACCAGGGCGCT------GGCGGCGGCGGCGGCGGC
ATGCCGTCCGGC---GCGGAGATGCTGCAGGCTGCCGCGGCGGCCGGGAATCCCATGGCGCAGCAGCAGTACATGCAACT
GATCCAGCAGCAGCAACAGCAGCAGCAGATGGCAATGCTGCAGCAACAGCAGCAGCAG---CAACAA------ATGATGA
TGATGA---------------------------ACGGCGGCCACGGCGGCGGCGCGGGAGGGTACCCTCAGATGGGCTAC
GGGCCGGGGTACGGGCGCCCGCCGATGGGCTCGTACCCGATGCCAACCGCCTATGCGATGCCGCCGCAGCCACCAGCGGG
---CGAGCCTTACAACTACTTCAGCGACGAGGACCCCAACAGCTGCTCGGTGATGTGAGAG---ATGGATCGC-GCCACC
GCCGCTCA------TGGTTTGAAGGAAGACCATGATGAATCTGGCAATGGCA-TGACATGGGGCAACAACAAGTCCCATC
TAGACCGTTTCTTCTTGATTAATTTAGCTTCTACATTTTCGCCCTTTATTTCAAGCTAAAAAAGAACAAGAGTTGTGAGA
CTTGCTTGAAGGCGATTGTAGGTACAGTAATTATCTATAGATGTCATAAGAGATGAATGCTCCATGCTGTTACAGTTGAA
GAACAATGTGATTGACTGATGGTAGATCAATGAACAGTATGCAAAATAACTCTGGTGTCAATGTTGTGTC-TTGTGTTTA
CATTCTGCGTTG-----GTACGACTGAAAAGTGAGATGTCCAGAAGAAACGATCGTAGAAATGTAGAAAGGATATGATGG
CAGTTCGCTACATTTTTTTTTGAGGGGC------GCAGTTCGCTACATCTTCTCAACCAAGCTTTTCTGGTCCTCCTTCC
TAAGAAAGACTCCCCACTGGACTTGGCCAATTTCGGCCCGATAAGCCTTGTGCACAGCTTTCCCAAGCTTCT----GCAA
AGGTGCCCA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CCATAGCCCATTTCCGCCCGGTAAGCATTGTGCACAGCTTC
CCCAAGCTTCTTGCAAAGGTGCTCGCCTTGGCCGATTTCTGCCCGATAAGCGTTGTGCACAACTTGCCCAAGCTTCTCGC
AAAGGTGAGCCTTAGCTGAATTCCGCCCGACAAGCTATGTGGACAACTTCCTCTAGCTTCTTGCAAAGGTGCTGGCGAAT
CGACTAGCCCAACGTCTCTATGAGCTCATCTTGTCCCCAAAGA
>chr5D_1843
CGCAGC--------------------------------------------------------------------------
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-----CGACGGCGCAGCAGCTTCAGCAGCTGCAACAGCAGATGCAGATGAAGGGAATGAAGCTGCCGC---AGTTCATGG
ACGGG---------AAGATGCCGTTCGCGGCGGCCGCGCCGATGAAGGACCCCAAGTCCGTCAAGTTCAACCTCCCACCA
GAGGATGAGTTCGGGGACGACGGCAGCGAGTTCGACGACGAGTTCGACGACTTCGACGACGAGGATGATTTCGACGATGA
CGGCCTCGACGACGACTACTTCGACGACCCCAAGATGATGATGAAGCCGATGGCCATGCCACCGAACGCCGGTGGAGGAG
ACAAGAAGGGCGGCAACAATGGTGGCAAGAAGGGTGGC------AACG---------AGATCCCGGTGCAGATCAAGGGG
AATCCCAACAACGGCGG------TGGCGGTGGCGGTGGCAAGAAAGACGCAGGTGGCAAGCAGA---ACCAAGGT-----
-GGCGGGGGCGGTAACGGCAACGGCGGTGGCAAGAATGGA---GGCGGTGGCCAGGCGAACAACGCCAAAGGAGGAGGAG
---GAGGCGCCCCGGGCGGCGGGGGCCAGGCGGGCCAACCTGGGAAGAAGGGCGGCGGCG---GTGGCCCCGGCCTCGGT
GTCGGTGGACCGATGGGCGGCATCGGCATGCCGCCGCAGCAGCAGGCCATGATGAGGCCTAACATGATGGGCGCTCCCGG
CTTTCC---TGGTATGGGCCCGATGGGAGGGCCCATGGGCCACCACCCCCACATGGGAGGCGCGCAGGGCGGTGGCGGAG
CCGCTCATGGCATGCCGGCCGGCGGCATGCCTCCACCTGGGTTCTTCCAGGGAGGCGCGGGCGGCGGCGGCGGCGGCGGC
ATGCCGTCCGGCCCCGCCGAGATGATGCAGGCT---------GCCGGGAACCCCATGGCGCAGCAGCAGTACATGGCCAT
GATGCAGCACCAGCAACAAATG------------ATGATGCAGCAGCAGCAGCAACAG---CAGCAG------GCGATGA
TGAACGGGCACGGGCACGCCCACGCCCACCCCCACCACGGCGGTGGCGGCGCTCCGGCGGGGTACCCGGCGATGCCGATG
GGGTACGGGTACGGGCGGCCGCCCATG---------CCGTACCCAATGGCGTACCCGATGCCGATGCAGCCGCACCCGCA
CGCGGACCCTTACAACTACTTCAGCGACGAGAACCCCAACAGCTGCTCGGTGATGTGAGAGGAGACGGATCGTGGCCGCC
GCCG----------------------------------------------------------------------------
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>chr5B_1843
CGCAGC--------------------------------------------------------------------------
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-----CGACGGCGCAGCAGCTTCAGCAGCTGCAACAGCAGATGCAGATGAAGGGAATGAAGCTGCCGC---AGTTCATGG
ACGGG---------AAGATGCCGTTCGCGGCGGCCGCGCCGATCAAGGACCCCAAGCCCGTCAAGTTCAGCCTCCCACCA
GAGGATGAGTTCGGGGACGACGGCAGCGAGTTCGACGACGAGTTCGACGACTTCGACGACGAGGATGATTTCGACGATGA
CGGCCTCGACGACGATTACTTCGACGACCCCAAGATGATGATGAAGCCGATGGCCATGCCACCGAACGCCGGTGGAGGAG
ACAAGAAGGGCGGCAACAATGGTGGCAAGAAG---------------G---------AGATCCCCGTGCAGATCAAGGGG
AACCCCAACAACGGCGG------TGGCGGTGGCGGTGGCAAGAAAGACGCAGGTGGCAAGCAGA---ACCAAGGT-----
-GGCGGGGGCGGTAACGGCAACGGCGGTGGCAAGAATGGA---GGCGGTGGCCAGGCGAACAACGCCAAAGGAGGAGGAG
GAGGAGGCGCCCCGGGCGGCGGGGGCCAGGCGGGCCAACCTGGGAAGAAGGGCGGCGGCG---GTGGCCCCGGCCTCGGT
GTCGGTGGACCGATGGGCGGCATCGGCATGCCGCCGCAGCAGCAGGCCATGATGAGGCCTAACATGATGGGCGCTGCCGG
CTTTCC---TGGTATGGGCCCGATGGGAGGGCCCATGGGCCACCACCCCCACATGGGAGGCGCGCAGGGCGGTGGCGGAA
CCGCTCATGGCATGCCGGCCGGTGGCATGCCTCCACCTGGGTTCTACCAGGGTGGCGCGGGCGGTGGCGGTGGCGGCGGC
ATGCCGTCCGGCCCCGCCGAGATGATGCAGGCT---------GCCGGGAACCCCATGGCGCAGCAGCAGTACATGGCCAT
GATGCAGCACCAGCAACAAATG------------ATGATGCAGCAGCAGCAGCAGCAG---CAACAACATCAGGCGATGA
TGA------ACGGGCACGCCCACGCCCATCCCCACCACGGCGGTGGCGGCGCTCCGGCGGGGTACCCGGCGATGCCGATG
GGGTACGGGTACGGGAGGCCGCCTATG---------CCGTACCCAATGGCGTACCCGATGCCGATGCAGCCGCACCCGCA
CGCGGACCCTTACAACTACTTCAGCGACGAGAACCCCAACAGCTGCTCGGTGATGTGAGAGGAGACGGATCGTGGCCGCC
GCCGCT--------------------------------------------------------------------------
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-------------------------------------------
>chr5A_1845
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--CGCCGACGGCGCAGCAGCTTCAGCAGCTGCAACAGCAGATGCAGATGAAGGGAATGAAGCTGCCGC---AGTTCATGG
ACGGG---------AAGATGCCGTTCGCAGCGGCCGCGCCGATGAAGGACCCCAAGTCCGTCAAGTTCAACCTCCCACCA
GAGGATGAGTTCGGGGACGACGGCAGCGAGTTCGACGACGAGTTCGACGACTTCGACGACGAGGATGATTTCGACGATGA
CGGCCTCGACGACGACTACTTCGACGACCCCAAGATGATGATGAAGCCGATGGCCATGCCACCGAACGCCGGTGGGGGGG
ACAAGAAGGGCGGCAACAATGGTGGCAAGAAG---------------GGTGGCAACGAGATCCCCGTGCAGATCAAGGGG
AACCCCAACAACGGCGGTGGCGGTGGCGGTGGCGGTAGCAAGAAAGACGCAGGTGGCAAGCAGA---ACCAAGGT-----
-GGCGGGGGCGGTAACGGCAACGGCGGGGGCAAGAATGGA---GGCGGTGGCCAGGCGAACAACGCCAAAGGAGGAGGAG
---GAGGCGCCCCGGGCGGCGGGGGCCAGCCGGGCCAACCTGGGAAGAAGGGCGGCGGCG---GTGGCCCCGGCCTCGGT
GTCGTTGGACCGATGGGCGGCATCGGCATGCCGCCGCAGCAGCAGGCCATGATGAGGCCTAACATGATGGGCGCTGCTGG
CTTTCCTGGTGGTATGGGCCCGATGGGAGGGCCCATGGGCCACCACCCCCACATGGGAGGCGCGCAGGGCGGTGGCGGAG
TCGCTCATGGCATGCCGGCCGGCGGCATGCCTCCACCTGGGTTCTTCCAGGGAGGCGCGGGCG------------GCGGC
ATGCCGTCCGGCCCCGCCGAGATGATGCAGGCT---------GCCGGGAACCCCATGGCGCAGCAGCAGTACATGGCCAT
GATGCAGCACCAGCAACAAATG------------ATGATGCAGCAGCAGCAGCAGCAG---CAGCAGGC---GGCGATGT
TGA------ACGCGCACGCCCACCCCCACCCTCACCACGGCGGTGGTGGCGCTCCGGCGGGGTACCCGGCGATGCCGATG
GGGTACGGGTACGGGCGGCCGCCCATG---------CCGTACCCCATGGCGTACCCGATGCCGATGCAGCCGCACCCGCA
CGCGGACCCTTACAACTACTTCAGCGACGAGAACCCCAACAGCTGCTCGGTGATGTGAGAGGAGACGGATCGTGGCCGCC
GCCGCT--------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------
>SNPs
-----S--S-------S-----S-S------------S---------------S--------------------------
-S------------------------------------------------------------------------------
---------------S--------------------S----------------------------------------S--
----------------------------S---S-----------------------------------------------
-----------------------------------------S--------------------------------------
------------------------------------------S--------------------SSS--------------
--------------------------------------------------------------------------------
-S------------------------SSSS---------------------------S--S-SS----------------
---------------------------------------------------------S-SS-------------------
--------S-----------------------------------------------------------------------
--S-------------------------------------------------------------------------S---
-------------------------------------------------SS-----------------------------
---S----------------------------------------------------S-----------S-----------
-------------------S------------------------------------------------------------
----------------S---------------------------------------------------------------
------------------------S-------S--S-------------------------S------------------
-----------------------------------------------------------------------------S--
------S--------------------------------SSS-------------------------------------S
--------------------------------------------------------------------------------
S----------------------------------------------------S------------S-------------
--S------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
S-----S--------------------------------------------------------------S----------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-------------------S------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S----------------S---------------------
--------------------------------------------------------------------------------
---------------------------------------------------------SSSS-------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------SSSSSS--------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-----------------------------S----------------S-----S------S-----------S--------
-----------S-------------------SS------------------------------------S----------
-------------S-------------SSS-S-SS-SSSSS-S-SSSSSS-SSS--SSSS-SSSSSSSSS-SSS--SS-S
SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-----------S-----SSSSS----S-----
---------S------------------------------S--------------------S------------------
----------S------S-SSSSS-SS--------------------------S-S------------------------
-------------------------------------------
>forward_964
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----------------------------------------------------------------TTCCTGGTAGCTGCCT
TCTC----------------------------------------------------------------------------
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-------------------------------------------
>reverse_2678
--------------------------------------------------------------------------------
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-------------------------------------CGCAGCAGGCCATGTTCAG------------------------
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--------------------------------------------------------------------------------
-------------------------------------------
>forward_1225
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TTGCTCCTGTGTCTGATCCG-------------------------------------------------------
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-------------------------------------------
>reverse_3333
--------------------------------------------------------------------------------
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----------------------------------------------------ATGACATGGGGCAACAACAAG-------
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--------------------------------------------------------------------------------
-------------------------------------------
