>input_sequence_40248
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----------------------------------ATGTCCTCCTGGTCACCTCCCGGGAGATCTTTCCTTCTATTCGGCG
CCAAAATAAACGTCACGGGCTGCGGCTTCGACGTGTTGATGCTCGAACACGACACGGGCACCAGCTCCAAAGTCTGCTCC
ATCACCTGTCCCGGCCACGAGATCACGGAGACGACGGCCAGGCAAGACTGCAACGGCACCTGGTGTTGCTCCGTCCCATT
TTGGTACAACCACCATGGATTTCAGTTCAGATTTGTCCGGCGGCGCGGCGAGGAAAGCAGGGGCCACCACACAAGTTCCC
TATGGAACAAAATCAGCGTGATAACGGACTATGCAAACCTGCAGTGGAATGTGGTAGATAGGCCAAGATGTGTCGACGCT
GAGGGAGACGCAGCCACCTACGCCTGCCTCAGCAACCAGAGCAGCTGCACCGATAGCCCCTTCATAGATGGAGGCTACTC
GTGCTCCTGCAACGGCGGGTACGTAGGCAATCCCTCTGTCCCCGACGGCTGCTCGCGCGACAAAGGTAACCTTCATCTTT
GTTCCCCTTAA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------TTTTTAACAAATATCCTCTCATAAGAAA
A-TTTCAGCAAGTTTGACTGTGCACT----TTGTATATCATCACGGGAACAAGAATTGGTATAAAATCTACTTTCAAAGG
TGGATAGTTATAA----------TCTTACAAAGTGAACACATCC----GTCACAAGAATGAAACAAAATATATAATATCG
ATACAAGACGTATCTTTCATGCCGGAAATATTCAAATCCAAATTTCTGAGGATTCTTAGAAAGATTCTTCTACTTGCCTT
GGACTTGCTTGAGACTTACACTTCCAAAAAAACAAGGGAATCCATGCATATATAG---AGGAAAAAAATTGACAAACTCT
GCCGTGAATAGTAGAATTTGGGTTATCTACTATGAATGGTATTATTTGTCTTTTCTTTTTGTCAGTAAGTTATTTCGATC
CGAACTTTTGTGAGGGGATGTATAAATATGAGTCTTTGCCCATATTTCAAAAAAAAATCATGATTTTCTATTGATTTCTC
AGATTGTATTTTGTACTACTTCCTCGTACATTTCTAAATGAATATAGGCAATAGATTGAAACTGATATATTCCTTAGACT
TAAAAAAGGTTTTTTCCAAAAATTACTAGCCACATAGATGGACAGATTTGATGACTATTTATGGTTACAATTTCCTATGG
ATATCAATATAAAAATTAGAGAGTTTCTAAAAAACTTTTAAAAAATCATAGGGAAATATGCAGAAAAGTTCTTAGGATGA
GTGCTGACAAACACAACTCACAAGGAGAATGATTGATTTCTAACTCAAACTGAAATTGGATTCGATACCTACAGATTTAT
TTATGGCTAAATTTATTATCCTATTGCACATGAAAAATATTTGTAATGGTCGTTTAAAGTTCAACAAGGCATCCTAAC--
TATCCAAACAAGCCATACCAACAATTAAATGTGGATCTCATAT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CT
TTATCTTTATCTTTACTCTTATAAATATATGAGGGAAATATGATTGATTTGATTGATGCATTTTTTCAGATAATGTTTTT
CATTTTGTACGAGCTCAGGGGCTATAGGGCGCTAATGTTAAACAACTAATAGTGGTAACATATAAAACAATTTACGAAAC
AATTATATCAATTTTTTGCATATATTAAAGAAAAATGCTAACATTAAACAATAGAGGATATTTGGATCCTGGGGAAATTC
ATCAATTTTCATTTCTAAAGTTTCACTAATTTGTGGAACTTTTAATAAATGGCGCACAAAAGGAAAAGCTAGGTAGGTTA
ACTTTGTCTTACAATAGTTCCCAACGATACAAAGGGTCCAAATAATGGGCATAGTGTAGGATCCACATGCG---------
--------------------------------------------------------------------------------
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------------------------------------------------------------AA------------------
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---------------------------------------------------------------ATTATGTCTTTAATTTG
GTTGGTTACG-------------------------------------------------------TTAAACACAACGTGG
CATACTACATTTTATCTAAAGAAAC-----TTTTTTTGTGCAAAAATAGGATACAACCCAATTCAATGA-----------
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-------------------------------------------
>chr6B_1_TraesCS6B01G020500
CAAAAGAAAGCTAAGGTGTTCATTGACCCAACTACAAAAGATATTATATAGAAAACATAACCTAGCTATTGCATGAGCAT
CAACATTCGCTTCCGTCGGAAAATGTTTGATTTCGTCCTTCCTGGTGGGACTAATCATCTCCACACAATCAGCATAGATT
ACCCCCGCTGCATCCCACTGTTGATCCCGTCCCGAGCATGCATCAATTGCCTCCAGGTTATCAGATTCCGCCTGGAGACT
ATTACATCGCCTCGTTGCACCGCGAGCTGGAGGCCATGCATGCTTTTTAAACTTTCAAAGCTATCCACAAGACGTGTTCC
AGGACCGCAGAACCAGATCGATCTTCCCGGGTAGCCTGAGCAATGAACGCGTCAAGACCAAGCTTTCTCCATAACTTCAT
CGTGAACACGCTTTTGAATACCACAATCCCTCTAACCATCCAACTACAGGTTGATTCGTACAGACCTTCCATGTTGGGCT
GCTTGGAATCCGGCCAGTCGCGCAGAATCAAGAATGCACGTACGTATCTACTGTTGGTGGGGTCCCCCTATAAATAAGGG
GTGCAAGTTTAAAAAGGATGTTGATTCATTAGAACATACTTACAGGCTAATTAAAACAGATAAGAGCAGAGCGAGAGATA
AGAATGAAGTGCTGCTGCTTGGTGCTCCTGCTCGCGTTGCTAGGGGCCACAAGTGGCCGGCCGTATGACGAGAGCAATCT
TGTTGTTCCCTCCACGGCCATGCTCGGCAGGTGCCCGAAGACATGCGGCAATCTGAGCTTCGCCTACCCCTTCGGCATCG
GCTCCGGCTAATTCCGCGACCCCGACTTCAACCTGACATGTGTCGACAGCGGCGGC---GGCACCACCAGGCTCTTCTTG
CGCGACGGCATCACCGAGGTCTTCGCCAGCCACAA-TTCCGGCATCGAAGTCGGCTGGTCGGAGTACATAGGCGTCTCCT
ATGCCGACGCCATCCCCGT-------------------------------------------------------------
--------------------------------------------------------------------------------
---------CGTCTCTGGCGTGGACGTTTACAACATGTCCTCCTGGTCACCTCCCGGGAGATCTTTCCTTCTATTCGGCG
CCAAAATAAACGTCACGGGCTGCGGCTTCGACGTGTTGATGCTCGAACACGACACGGGCACCAGCTCCAAAGTCTGCTCC
ATCACCTGTCCCGGCCACGAGATCACGGAGACGACGGCCAGGCAAGACTGCAACGGCACCTGGTGTTGCTCCGTCCCATT
TTGGTACAACCACCATGGATTTCAGTTCAGATTTGTCCGGCGGCGCGGCGAGGAAAGCAGGGGCCACCACACAAGTTCCC
TATGGAACAAAATCAGCGTGATAACGGACTATGCAAACCTGCAGTGGAATGTGGTAGATAGGCCAAGATGTGTCGACGCT
GAGGGAGACGCAGCCACCTACGCCTGCCTCAGCAACCAGAGCAGCTGCACCGATAGCCCCTTCATAGATGGAGGCTACTC
GTGCTCCTGCAACGGCGGGTACGTAGGCAATCCCTCTGTCCCCGACGGCTGCTCGCGCGACAAAGGTAACCTTCATCTTT
GTTCCCCTTAA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------TTTTTAACAAATATCCTCTCATAAGAAA
A-TTTCAGCAAGTTTGACTGTGCACT----TTGTATATCATCACGGGAACAAGAATTGGTATAAAATCTACTTTCAAAGG
TGGATAGTTATAA----------TCTTACAAAGTGAACACATCC----GTCACAAGAATGAAACAAAATATATAATATCG
ATACAAGACGTATCTTTCATGCCGGAAATATTCAAATCCAAATTTCTGAGGATTCTTAGAAAGATTCTTCTACTTGCCTT
GGACTTGCTTGAGACTTACACTTCCAAAAAAACAAGGGAATCCATGCATATATAG---AGGAAAAAAATTGACAAACTCT
GCCGTGAATAGTAGAATTTGGGTTATCTACTATGAATGGTATTATTTGTCTTTTCTTTTTGTCAGTAAGTTATTTCGATC
CGAACTTTTGTGAGGGGATGTATAAATATGAGTCTTTGCCCATATTTCAAAAAAAAATCATGATTTTCTATTGATTTCTC
AGATTGTATTTTGTACTACTTCCTCGTACATTTCTAAATGAATATAGGCAATAGATTGAAACTGATATATTCCTTAGACT
TAAAAAAGGTTTTTTCCAAAAATTACTAGCCACATAGATGGACAGATTTGATGACTATTTATGGTTACAATTTCCTATGG
ATATCAATATAAAAATTAGAGAGTTTCTAAAAAACTTTTAAAAAATCATAGGGAAATATGCAGAAAAGTTCTTAGGATGA
GTGCTGACAAACACAACTCACAAGGAGAATGATTGATTTCTAACTCAAACTGAAATTGGATTCGATACCTACAGATTTAT
TTATGGCTAAATTTATTATCCTATTGCACATGAAAAATATTTGTAATGGTCGTTTAAAGTTCAACAAGGCATCCTAAC--
TATCCAAACAAGCCATACCAACAATTAAATGTGGATCTCATAT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CT
TTATCTTTATCTTTACTCTTATAAATATATGAGGGAAATATGATTGATTTGATTGATGCATTTTTTCAGATAATGTTTTT
CATTTTGTACGAGCTCAGGGGCTATAGGGCGCTAATGTTAAACAACTAATAGTGGTAACATATAAAACAATTTACGAAAC
AATTATATCAATTTTTTGCATATATTAAAGAAAAATGCTAACATTAAACAATAGAGGATATTTGGATCCTGGGGAAATTC
ATCAATTTTCATTTCTAAAGTTTCACTAATTTGTGGAACTTTTAATAAATGGCGCACAAAAGGAAAAGCTAGGTAGGTTA
ACTTTGTCTTACAATAGTTCCCAACGATACAAAGGGTCCAAATAATGGGCATAGTGTAGGATCCACATGCG---------
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------------------------------------------------------------AA------------------
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---------------------------------------------------------------ATTATGTCTTTAATTTG
GTTGGTTACG-------------------------------------------------------TTAAACACAACGTGG
CATACTACATTTTATCTAAAGAAAC-----TTTTTTTGTGCAAAAATAGGATACAACCCAATTCAATGAGTAGCAAATTG
CACCCGACGATGTGGGAACATTGACATCCCATTTCCATTTGGCCTAGACGAAGGTTGTTTTGCTAGGAAGGTATTCCAGC
TCAATTGCACTAATGTGACGAACTCTACACTCCAAATGAAAGATGATGGAT---ATCAAGTGACGCACATAAATCTTAAT
GAGGGGACCGTTGATATAAATTCATGGCATATTACCAACAGGAGGCGTTTCA----GATTAACATTGATGAAGAACCTAA
TCTCTATATGGGTCCTTGGGGA---ACATCATCGGTGCAATGGGCAGTCTCTAACCTAACCTGCCAGGAGGCACTGATGG
ACATGTCTAGTTATGCATGTGTTAGCATCAATAGCACATGCTTAGTTGTAAACTGTACAATGGATGGTTTCTATGGTTAT
CGCTGCAAATGCTCACGGGGATTTCAAGGAAATCCATATGTCCGGAAAGGTTGTCAAGGTACTCTCTCTCAAACACTAGA
AACAAAAAATATCCATTACAACCTTCTGTACAAAATAATCACCTACCAACTAGCTCTCTCACATGT----ATAATAAATT
TACCTCTAACGGGTCTAACCTACATGAGATGCGGGTGCAGATATTGATGAGTGCAAGAATACAAGAGATATATGTGAAGA
GGTTTGTCATAATACTGTGGGAAGCTACTGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTAT
ATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATGATACATGTGTGAATACATAGACAAACAT
ATAGTCACTAGTATGCCTCTACTTGATTAGCTCATTAATCAAAGATGGTTATGTTTCCTAACCATAGACATGTGTTGTCA
TTTGATTAACGGGATCACATCATTAGAAGAATGATGTGATTGACATGACCCATTCCGTTAGCCTAGCACTTGATCGTTTA
GTATATTGCTATTGCTTTCTTCATGACTTATACATGTTCCTGT
>chr6A_686
--------------------------------------------------------------------------------
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---------------------------------------------GCGACAAATGGCCGGCCGTATGAGGAGGGCAATCT
TGTCATCCCGTCCCCGGCCATGCTCCGTGGGTGTCCGAAGAAGTGCGGCAATCTGAGCTTTGCCTACCCGTTCGGCATCG
GCTCCGGCTGCTTCCGCGACCCCGACTTCAACCTGACCTGCGTCGTCGACGGCAGCACGGGCACCCACAAGCTCTTCTTG
CGCGACGGCATCACCGAGATCGTCGACGG----------CGGCATCGACGTAGGCTTGACGCATTACATAAGCGTCACCT
CTGCCGACGACGCCGATGTCTCCGTTGCTGAAATTTGAGATGGGCTCTAGGCCCATATAGCAATTTCTAAAAAATCTCTA
AAAACCCATGTGGGTTATATGGCACTAGGTGTAGTGGGAAGTTTAGTCCCACCCCGCTAGTGTGAAAAATTACCTATTTA
CTCAACATCCGTCTCCGGCGTGGACATTTACAACCTGTCCTCTTGGTCACCTCTCGGGAGATCTTTCTTTCTATTCGAAG
CCAGCATTAACGTCACTGGCTGCGGCTTCGACGTGTACATGCTGGACCACGACATGAACACGGCCTCAAAGGTCTGCTCG
ACCACCTGCCCCGGCACGGAGATCGCCGAGACGATGGCCATGCAGAACTGCAACGGCACCTGGTGCTGCTCCGTCCGTTT
TCTCTTTAACTTTAATGGGTTTCAGTTCAACTTTGTCCGGCGACGGGGCGAGGAA-------------------------
-------------------------------TGCAGAACTCATGTGGAGTGTGGTGGATCAGCCAAGATGTGCCGACGCC
GAGGCAGACGTAGCTACCTACGCCTGCCTCAGCAGCAATAGCAGCTGCACCGATAGCGATTGGACATCTAGCGGCTACCA
CTGCTACTGTAACGGCGGGTATGTAGGCAATCCCTATGTTCCCGGTGGCTGCTCGCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCATAACAAACTTTCAGTTTTTGAACAAATTCCCTCTCATAACAAA
ACTTTCAGTAAGTTTTGCTGTGCATGCACCTTGTACAACATCACCGGG--AACAATTAGTATAAAGTCTACTTTGAAGGT
GGATGGTTTGTTAGTTACAATCTTCATACAAAATGAACACATCCAGAAGTCACAAGAATGAAAAGAAAA----AATATCG
GCACAAGATGTATCTTTCATGTTCAAAAATTACAAATCCAAATTTC----------------------------------
---------------------------------------ATCCATGTATTTATGGAGAAGAAAAAAAAAAGATAAGCTCT
TCCGTGAATAATCAAAAACTGATTAGCTAATAC------TAACATTTTTCTTCTCTTTTTCTCACTGGCG--TTTCAGTG
AGAACTTTTGACAGTG-----------ATGACTCTTTGCCAATATTTTAGAATTTAGAGTGAATTCCACTTTCAACCCGC
AAGCTTTGTGACAGATTTTACCCCATTTAGCAAAAATTCTTAATCTTTGCTCAATTAAGCAAAAATTGTGACATCGATTA
CCCCATTTTATTATTTTTCTTTCCAGTTTTACTGTTGACTGTACCTACCATATTTGGGATTTATTTTTTCTCGGGTTTTA
GTCTGCTTTTCCGCATTCTTGAAAACCGAATTGGCGATCAACGGATCCACCACACCGCCCCCATCGCAAACCCAACCCAT
CCTCATCGCACC---------------------ACCACTATCGAGGGAGCGAGACCTCCTCGACTGG-GGGCACACCTCC
A----CCCGTGGCGGATGCCCGCAGGTCCGCAGGGAACTCCGGAGC------------------CAACCCATACTACC--
AACCTGCAGAAGCCATGCTCCGTCCATCGATGGCCCCATCGACGCAGACATTGAGCTCCCGCACCAGCCAACAACCGTAT
AGCATGGATCTGGGTGCTAAGAGCGTCTACAACCGAAGCCTTCAAATGTCACATCCGACTGTTTGGTCCGAACAGGAGGG
AAAGTTAAAAAAAAGCCACCCGACTGGACGTGCCATATCCGAACCAAACGCCCGAACTGGCCTGCAGCCCCATATCTAAC
CCATATGCGGGGAGGATATGGGAACGTACGGGCGTGTCCGGGCAGGGAGCCACGTAGGATTTGGCCCATCGCAAACCACT
TTTTCTCTTTCTTTTCTTTTCTCTCTCTTTCTCTCCGCCAATCATATGCATATGACCGCACAATATGAGGAGTGTGATTG
TTTTGCAAGGAAAGTGAGGATCCAAAACGTGCCCGGACACTAACCTGGCATGTCCGCAGGCGTACGGGGGCCAAATTAAG
CAATCATGGTTGTAGATGCTCTAACGACGCATTCCACAGCAACCCCGTGCTCCCAGCCTCCAACCCTGGCGTTAATGAAT
ATCGACCTGGTGGCGCGTGGCAACACGTCATCTTTGAGACGGCAACCACTGCCACTGACCCGGTGTCGCTGCTCCGTCGC
CCACGCCTACATCCCACATCCACCATGCCTAGTCGGATCCCGCACCATCTACCAGAAAGAGCCACAATCCTCCTGATGCA
GGATCCGAATCACCATCCCTCAACACCTAAACTCAAAGACTAGTCGATGTCTTGCCGAGTAATGAGCTGCAGCAGCAGGA
AACATGTGCGACACCAGATCCCCTGCAGCCACACTCACGACCACCTACCGTACGTGCCACGAAAGAAGGCCCCGCCGCCT
TTGCTCGGCTATGCCTACGAGTTGCTGTGAGCGGAGGATGAAGAGTGTGGGGCGGAGAATTGCTGGATTTGGGGTTCACC
CCAGTACCGCTTTGGAGCAACATGGGAGCGAGTCCTGGTTTCTGTTTCTCGCATTTGCAAAATTGGATGATACCCCGCAC
GTTGATGCGAAGATGTTTTGCAATACATTTCAGTGTAATTTTATTGTATAGAGCATGAATAATTGAAGTAACAATACGAG
AACTAAAACAGAAAATACTTGTGATTTATTCTGCTATACTATTGCATAGTTATAAAATATCTTGCATAATAGAATGAAAA
TTATCATGTATGTTTGATATTAAGGGTTTTTTATGCTTTGTTGCATATTATGTTGGGGTGTTTTCTTATGCATGTTGATG
TGGAAACAATGTGATTTAAAACCCATTTAAAATGCACTAATGCGTGTTGCATGGTAGATGATTCTCATGCGTACATCAAA
CGGATGCTAGTGGATCAAGCTAGTAATGTTATGGCTAGGACAATTTGAATGGTGTGGAAGCATGCATGTTAAGATAATTA
GAAGTAGTGAGAATCACCCTCTTAGGTATATACTCCCTCCGTCCTTAAAAAAATGTAGTTCCAACTTTGTTTGGGAGTTA
AACTATCTCAAAGTTTGACCGAGTTTGGCAAAAATATATCAATGTTTGTGAAACCAAATAGGTATACGATGAAAATATAT
TTTTATCATGAATCTAACGCTACTAATTTGATGGCATAAATGTTGGTGTATTATTGTATAAATATGGTCAAACATAAAAA
AATTGACTTTCAATAAAGTTGAAACTTGGAAGTTCACTTTTTTAAGGACGAAGGGAGTATAGGATTATGTCTTTAATTTG
GCTGGTCATATTCTCAAAAATAAAAATTGGCTTGCTA------TTTTTTTAATTAGCTTGCTATATTAAACGCAACATGG
CACACTACATTTCATCTAAAACTTATATTTTTCTTCTTTGTGAAAATAGGATATGAGCCAATTCAACGAGTGGCAAATTG
CACACGACGATGTGGAAACATTGACATCCAATTTCCGTTCGGCCTAGAAGAAGGCTGTTTTGCGAGGGAGGTATTTCAGC
TGAATTGCACTAATGGGACGACATCTACACTACAATTGAAAGATGATGATGAGAATCAAGTAACGTACATAAATATTGAG
GAGGGGCTAATTGAGATTAATTATACCACAGATTATTACGACCTGCAGTTTTCAACGAATTATATTGAAAAAGGATCTAA
CCTCTATATGAGTAGTTATTGGCACACATCATCGGTGCAGTGGGCTGTCGCTAACCTAACTTGTCAAGAAGCACAGATGG
ACATAACTAGGTATGCATGTGTTAGCATCAATAGCACATGTTTGATTGTCAACTCTACGATGAATGGTTTCTATGGTTAT
CGCTGCAAATGTTCGGCAGGCTATCAAGGAAATCCGTACGTGCGTACAGGTTGTCAGGGTAATCCCTCC-----------
-----------------------------------------------------CTCCCTCCCTCTT----TTAAAAAGTT
TATCCCTCACGGC-CTAAACTAGATGAGATTGCGATGCAGATATTAATGAGTGCACTAATACAAGAGGTATATGTGAAGA
GGTTTGTCATAATACTGTGGGCTGCTACT---------------------------------------------------
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-------------------------------------------
>chr6D_689
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------------------------------------------------ACAAGTAGCCGGCCGTATGAACAAAGCAATCT
TGCCGTTCCGTCGGCGGCCATGATGGGCAGGTGCCCGAAGAAGTGTGGCAATCTGAGCTTCGCCTACCCATTCGGCATGG
GCACCGGCTGCTTCCGCAACCCCGACTTCAACCTGACCTGCGTCGTCGAAGGCAGCACGGGCACCTCCCGGCTCTTCTTG
CGCGACGGCATCACCGAGGTCGCTGCCGGCCATTGGTTCCGGCATCGAGGTCGGCTGGTCGCCGGAAATAAGCATCTCCT
ACACCGAAACCGTCCCTGT-------------------------------------------------------------
--------------------------------------------------------------------------------
---------CCGCTCCGGCGTGGACGTCTACAACATGTCCTCTTGGTCACCTCCCGGGCGATCTTTCTTGCTATTCGATG
CCAGCATAAACGTCACGGGCTGCGGCTTCGACGTGTACATGCTGGACCACGACTTGAACACGACCTCAAAGGTCTGCTCA
ACCACCTGCCCCGGCGGCGAGATCACGGAGACGATGGCCATGCAGAACTGCAACGACACCTGGTGCTGCTCCGTCCGTTT
TTTCTTTAACTTTAATGGGTTTCAGTTCAGCTTTGTCCGGCGACGGGGCGAGGAAGGCAGGGTAAACTACACAAGTCCCT
TGTGGAACAAGATCAGCGTCACAACGGACGATGCAATCCTGCTGTGGTATGTGGCCGATCAGCAAAGATGTGCCGACGCC
GAGGCAGACGTGGCCACCTACGCCTGCCTCAGCAGCAACAGCAGCTGCACAGATAACGATTTTACATATAGCGGCTACCA
ATGCTACTGCGACGGCGGGTATGTAGGCAATCCCTATGTTCGCGGTGGTTGCTCGCGCGACAAAGGTAACCTTCTTTTTT
TTTCCC-TTAA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TTTTGAACAAATTTTCTCTCATAACAAA
C-TTTCGGTAAGTTTTACTGTGCACT----TTGTAGAACATCACCGGG--AACAATTAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTAGTACTACCTCCGTCCGAAAAAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------CAACGGAGCCGCCACACCACCCCCATCGC-AACCCAACCCGT
CCTCATCGCACCCATAGTTTGAGTCATCGCACCACCGCTATCATGGGAGCAAGACCTCCTCGACTGGCGGGCACACCTCC
ATGTTCCCGTGGCGGACGCCCGCAGGTTCGCAGGGAACTCCAGAGC------------------CAACCCATACTACCCC
AACCTCCAGAGGCCGTGCTCTAGAACAGCACGA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------GAGCGGGTCCTGGTTTATGTTTCTCACACTTGCAAAA------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------ATTATGTCTTTAATTTG
GCTGGTCATATTATTAGAAAAATGTCTTGTTATATTATTATTCTTATTTGAATTGGCTTGTTATATTAAACACAACGTGG
CACAGTACATTTCATCCAAAACTTGTAATTT--TTCTTTGTGCAAATAGGATATAAGCCAAATCAACAAGTGACAAATTG
CACACGACGATGTGGAAACATTGACATCCAATTTCCTTTCGGCCTAGAAGAAGGCTGTTTTGCGAGGGAGGTATTTCAGC
TGAATTGCACTAATACGACAACCTCTACACTACAAATGAAAGATGATGATGAAAATCAAGTGACGTACATAAATATTGAG
GAGGGGCTAGTGGAGATTAATTATACGGCAGATTATTACAACCTGCGGTTTTCCGCGAATTATATTGACGAGGAATCTAA
CCTCTATATGAGTAGTTATTGGCACACATCATCGGTTCAGTGGGCTGTCGCTAACCTAACTTGTCAAGAAGCACAGATGG
ACATGTCTAGGTATGCATGTGTCAGCAGCAATAGCACATGTCTGATTGTCAACTCTACGATGAATGGTTTCTATGGTTAT
CGCTGCAAATGTTCGCCAGGCTATCAAGGAAATCCGTACGTACATACTGGTTGTCAGGGTAATCCCTCC-----------
-----------------------------------------------------CTCCCTCTCTCCCTGTCTTAAAAAGTT
TATCCCTCGCGGC-CTAAACTAGATGAGATTGCGATGCAGATATTAATGAGTGCACTAATACAAGAGGTATATGTGAAGA
GGTTTGTCATAATACTGTGGGGAGCTA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S--------------------S-----------
---S-----S---S---------------------------SS--------------------------S----------
---------SS--------------------------S--S----S-SS----S-----------S--------------
---------------------S-----S----SSS-------------S------------S--------S---------
-----------S----S---------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S--------------------------S------------------------S---------SS-
---SS-------------------------------SS-----S--S-------S-SS---S-S---S--S--------S
-S------S------SS-----------------S-----S---SS-------------------S----------SS--
--SS-SS---SSSS----S-----------S-----------S--S---------S------SSS--S--------S--S
-S--------S--------S-S-------S------------S------------S---SS-----------S------S
----S-----S-----------------------S-S-S------------------SSS--S-S-S--S-S------SS
S----S---------------S-------------S---S----SS----------------------------S-S---
S-----S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-------S-----------S---
--------S------S-------------------S-S------S--SSS--S----S-------S--------S--S-S
S-SSSSS--S-S-------------S------S------------------------------SS---SSSSS-------
SS------S------------SSSS---SS-S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--S---S------S-------SS--S--S----
S---------S-SS--SSSS-S---S---S--SSSSSSS--SS----S----S-------S---S-SSSSSS----SS-S
S---------SS--S-SSSSSSSSSSS----S--------S------S-S--SSS-SSSSSS---SSSSS--S-SSS-S-
-SSS-S-S---S-------S---SSS-SS-SSSSS-SSSSS-SSSSSSSSSS-SS-SSSS-SSS--SSSSS-S-SSSSSS
SSSS-SSSSS--S--SSSSSSSSS-S-SSSSSSS-S--SS-SSSSSSSSSSSSSSSSSS-S-SS--SSSS-SSSS-S-SS
S-S-SSS-S-SSSS---SSS--SSSS-S--SSSS-SS-S--SSS---SSSSSS-SSSSSS-SSSSSSSSS-SS-SSSS-S
SSS-SSSSS-S-SSS-S-SSS-SSS-SSSSSSSSSSSS-S-S-SSSS-S-SSS-SS-SSSSSSSSSS-SSS--S-SS-SS
S-S-SS-SSSSSSSSS-SS--SSSS-SS-SSSSSS--SSSSS-SSSSSSSSSSSSSSSSSSSSS---SS---S---S---
S-S-SSS-S-------S-SSSSS-SS-SSSSS-SSS-SSSS-S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S---S-S-----S--S--S-SSS-S-S-SSSSSSSSS-SSSS-SSSSSS--SSSS---SSS-S-S--SSSSSSSS--S
SS--SSSSSSS-SS-S---SS-S-S-SS-S--SSSSSSSSS-SSSSSSSSS--SSSS-SSSS--SSSSSSSSS-SSS--S
S-S-SSSSSSSS-SSS---SSSS-SS-SSS-SSSSSSSSS-SSSSSSSSSSSSS--SS-SSSSSSS-SSS-SSS-SSSSS
---S-SS-SSSSSSSSSSS-SSS---SSSS-SS-S--SSSSSS--SS-S--S-S-SS-SSS--SSSS---SSSSS-SSSS
S-SSSSSSSS-SSSS-SS---SSSSSSSSS-SSS--SS-SSSS-SSSSSS-SSSSSS--SSS-SSS--S-S---------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-S----S-SS----------------------------------------------------------------------
--S---------S-------SSSSS-------S--S-S--SS-----------S--S---------S----S--------
---S-----------S-------------S------S--S--------S-----S--------S---S-------S----
-S-------------S-----S---------S----------------SSS--------------S--------S--S-S
------SSS-----S--S----SSSS-SSSSS-SSSS---SSSS---S--SS------S-S-S-----S------S----
S---------S--SS--SSS-S-----------------S-----S---S----------S--S--S--S----S-----
----------S-----------------------------S--SS----S----S---S---S-----------------
-----------S--S-SS--S-S------------S--S--S--S-S---------S----S--S---SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---S-SSS-----S---S--S--
--S-S--S----SS----S---S-------SSS-S----------S---------SS----------S------------
---------------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_188
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TGCATCCCACTGTTGATCCC----------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1587
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------GATGGAGGCTACTC
GTGCTC--------------------------------------------------------------------------
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-------------------------------------------
>forward_480
--------------------------------------------------------------------------------
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------------------------------------------------------------CAGACCTTCCATGTTGGGCT
--------------------------------------------------------------------------------
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-------------------------------------------
>reverse_1622
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CGTAGGCAATCCCTCTGTCC---------------------------------------
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-------------------------------------------
>forward_1606
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GATGGAGGCTACTC
GTGCTC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>reverse_3526
--------------------------------------------------------------------------------
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-----TGTACGAGCTCAGGGGCTAT-------------------------------------------------------
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>forward_1636
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----------------GGGTACGTAGGCAATCCCTC--------------------------------------------
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>reverse_5235
--------------------------------------------------------------------------------
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----------------------------------CCAACAGGAGGCGTTTCAGA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
