>input_sequence_40246
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----------------------------------------------------------------ATTCCCAGTCAGCTGT
CTGGACGCCATGGCTCTTGAAGCAGCGTACCACTACCTGCAGCGCGCTGTCGGCCATGGCACATCCACAGAAGCACTACT
ACTCACCGTTCTCCTGCTACTCATCATCCGACTAGCATGGGTAAGAGCCTTCGCCACCACCACCGCATCAACAAAATGCA
------AGCAGCAGCTCCCGCCTACACCTCCAGGCAAGCTGCCTATCATCGGCCACCTCCACCTCATCGGTTCCCACCCC
CATGTCTCCTTCCGCGACCTCGCCGCAAAGCATGGCCGCGACGGCCTCATGCTCGTCCATGTCGGTGCCGTGCCCACCGT
CGTCGTGTCCACGCCCCAGGCCGCCGAGGCTGTCCTGCGCACGCACGACCACGTGTTCGCGTCCAGGCCACGTAACCCCG
TCGCCGACATCATCCGCTACAACTCCACAGACATCGCGTTCGCGCCCTACGGCGACTACTGGCGTAGGGCTAGGAAGGTC
GTCAACACGCATCTGCTCAGTGTCAAGATGGTCTACTCCAAGCGCCATGACCGCGAAGAAGAGGTACCTAGCTAAAGGCA
---TATATTACTCTTCTTTTATAGAAACACGGTACAGACACAGACGCTCACACTGATCGACTCAATGATCACTGTAGGTG
CGGCTCGTGGTCGCCAAGATCCGTGAGTTGGCCATGGCCGCTCCAGGCAAGGCGTTGGACATGACAGAGCTCCTGGGCGG
GTATGCCAGCGACTTTGTGTGCCGTGCGGTCCTCGGAGAGTCCCACAGGAAGCATGGCCGGAACGAGCTTTTCCGCGAGC
TCACCGAGATCAGCGCCTCCCTGCTGGGGGGATTCAACCTGGAGGACTACTTCCCGAGGTTGGCAAACCT---GGATGTG
TTCCTCAGGGTGGTTTGCTCCAAGGCAATGGGAGTCAGCAAAAGGTGGGACAACCTGTTTAACGAGCTCATCGCCGAATA
TGAACACGGCAAGGAAGATAACGCGGAG---------------GACTTCGTACATCTTTTGCTTTCTCTGAAGAAAGAGT
ACGGTCTCTCCACGGATAACGTCAAGGCCATCTTGGTGGTAATTAACTCAACCTATC-ATTTGAAGTTGCCATGCATGTT
GCATAATAC---------TCCATGATTGATAAACAGTACTAAG---ATTTGTGTGATCTTGTAACAGAACATGTTTGAGG
CAGCTATAGAAACATCATTCCTGGTGCTGGAATACTCCATGGCCGAGCTCATCAACAACAGGCACGTCATGGCCAAAGTG
CAAAAGGAGGTAAGGGAGTCCACACCCCACGGCGAAAAGCTGGACCTGATAATGGAGGAGGACCTCAGCCGCATGCCGTA
CCTCAAGGCGACCATCAAGGAGGCGATGCGCATACACCCGCCGGCGCCCTTCCTGCTCCCACACTTCTCCACCAATGACT
GCGAGATCAACGGATACACGATTCCCGCGGGAACACGGGTCATTGTGAACGCTTGGGCTCTTGCCAGAGACCCGTCGCAC
TGGGAGAGAGCGGAGGAGTTCTACCCGGAGAGGTTTCTCCAAGAAGGCCGTGATGCAGAGGTCGACATGTATGGTAAGGA
TATCCGCTTTGTGCCGTTTGGGGCCGGGCGGCGGATCTGCGCGGGTGCTACTTTCGCGATCGCTACTGTTGAGGTAATGC
TGGCAAACCTCATATACCATTTCGACTGGGAGCTTCCCAGTGAAATGGAGGCCATTGGCGCAAAGGTTGATATGTCCGAT
CAGTTTGGGATGACGCTTCGCCGAACGGAGAGGCTTCACCTTGTTCCTAAAATTTACAAATAAGTACCACCGTAGGTTTG
------TGTTTGTATCAGCTGATACTGTCAGCTACCATCGCATGGTCTGTTAGTTGAGTGCCTATTACTATGTCACCTTA
ATGTAGTCGTGTTGCATGCTTAATAGCTCCGGGAGTTTGTTGCACACGAGATGGACCTGTCGGATCCTCAATAAA-----
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>chr5B_1_TraesCS5B01G007100
TCGGTTTTTTGGCAAGCCATTCATGATTTCTTTCATGAGCAAAAGAACTACCCCCCCCCCCCTCATATGGCAAAGAAGTC
ATCCATGATCGCAATGCAAAGTCGCTAGCCCATCGATAATACACCATTCAACATGAGGTCAACAAGTATTGCATGCGGCG
CATACACATAAACACAAAAGCGGCGAGGTTTGTTCAAGTTTTCGTGCTAAGATGAGGTCTTTGATACGGACAACCAGACT
AGGGGCTTTTATGATCGATGGATGTATAAAACTTTACGAACATCCGTTGCTTTTGATAGTAGTTGCATCTGTTTATAAGT
ATATAAATGTATGTATGTTTGAATTGCTATAGATCTAGTTAAAGTTTGTCACAGGAATGAGA--CTGGACAAGGGCGGAT
ATTTGGTGACTT-AAGTGATCCGCGTTATAGGGACAATTCGCAAGC-TTAACTGCCCCTATATATG--------------
-----------------------------------GAAGATACTTTTATGGCTATATCTGTTT--TTTTACATCTCTTGT
TTTTTAACTACCC--------------------------------------CTATTAACGCATGTGCACATACCTTATCC
TTATAAACACCTCCAAGAGACAGAGTCGGCACATTATCTTGAGGTTGACAAAATCGCCACAAACGCCTTCGTAGTCGACA
GGAACATCTCCTCCCACTATACGCACATCACCAAAAGGCCTGGAATAAATTAAAGAAAATGTAAGTATCAATGTCAAGTT
TGGGACTTGAACTCTGGTGGGTAGGAGATACAACTG---TCCTAACTATCCAACCACAAGTTCTCTCTAATTATATATGT
TTGATTGTGATCAATGTTTCATATGGACAAAAATACCTTATTATTTACTGTCATGCTGGTAACATATTCCACTTGTTTTT
GGATTTTATTGAGAGTATACGATTTTTGTTGTCAACATAAAGTATTGCCAATTTTGTAGACAAGTCGT----GTGGCTGG
----AGCGAATAAACGTTACGGGTGTGCTTATATAGAGAGCGTGTGGTGAGTAGGAGCCCAGCCATTCCCAGTCAGCTGT
CTGGACGCCATGGCTCTTGAAGCAGCGTACCACTACCTGCAGCGCGCTGTCGGCCATGGCACATCCACAGAAGCACTACT
ACTCACCGTTCTCCTGCTACTCATCATCCGACTAGCATGGGTAAGAGCCTTCGCCACCACCACCGCATCAACAAAATGCA
------AGCAGCAGCTCCCGCCTACACCTCCAGGCAAGCTGCCTATCATCGGCCACCTCCACCTCATCGGTTCCCACCCC
CATGTCTCCTTCCGCGACCTCGCCGCAAAGCATGGCCGCGACGGCCTCATGCTCGTCCATGTCGGTGCCGTGCCCACCGT
CGTCGTGTCCACGCCCCAGGCCGCCGAGGCTGTCCTGCGCACGCACGACCACGTGTTCGCGTCCAGGCCACGTAACCCCG
TCGCCGACATCATCCGCTACAACTCCACAGACATCGCGTTCGCGCCCTACGGCGACTACTGGCGTAGGGCTAGGAAGGTC
GTCAACACGCATCTGCTCAGTGTCAAGATGGTCTACTCCAAGCGCCATGACCGCGAAGAAGAGGTACCTAGCTAAAGGCA
---TATATTACTCTTCTTTTATAGAAACACGGTACAGACACAGACGCTCACACTGATCGACTCAATGATCACTGTAGGTG
CGGCTCGTGGTCGCCAAGATCCGTGAGTTGGCCATGGCCGCTCCAGGCAAGGCGTTGGACATGACAGAGCTCCTGGGCGG
GTATGCCAGCGACTTTGTGTGCCGTGCGGTCCTCGGAGAGTCCCACAGGAAGCATGGCCGGAACGAGCTTTTCCGCGAGC
TCACCGAGATCAGCGCCTCCCTGCTGGGGGGATTCAACCTGGAGGACTACTTCCCGAGGTTGGCAAACCT---GGATGTG
TTCCTCAGGGTGGTTTGCTCCAAGGCAATGGGAGTCAGCAAAAGGTGGGACAACCTGTTTAACGAGCTCATCGCCGAATA
TGAACACGGCAAGGAAGATAACGCGGAG---------------GACTTCGTACATCTTTTGCTTTCTCTGAAGAAAGAGT
ACGGTCTCTCCACGGATAACGTCAAGGCCATCTTGGTGGTAATTAACTCAACCTATC-ATTTGAAGTTGCCATGCATGTT
GCATAATAC---------TCCATGATTGATAAACAGTACTAAG---ATTTGTGTGATCTTGTAACAGAACATGTTTGAGG
CAGCTATAGAAACATCATTCCTGGTGCTGGAATACTCCATGGCCGAGCTCATCAACAACAGGCACGTCATGGCCAAAGTG
CAAAAGGAGGTAAGGGAGTCCACACCCCACGGCGAAAAGCTGGACCTGATAATGGAGGAGGACCTCAGCCGCATGCCGTA
CCTCAAGGCGACCATCAAGGAGGCGATGCGCATACACCCGCCGGCGCCCTTCCTGCTCCCACACTTCTCCACCAATGACT
GCGAGATCAACGGATACACGATTCCCGCGGGAACACGGGTCATTGTGAACGCTTGGGCTCTTGCCAGAGACCCGTCGCAC
TGGGAGAGAGCGGAGGAGTTCTACCCGGAGAGGTTTCTCCAAGAAGGCCGTGATGCAGAGGTCGACATGTATGGTAAGGA
TATCCGCTTTGTGCCGTTTGGGGCCGGGCGGCGGATCTGCGCGGGTGCTACTTTCGCGATCGCTACTGTTGAGGTAATGC
TGGCAAACCTCATATACCATTTCGACTGGGAGCTTCCCAGTGAAATGGAGGCCATTGGCGCAAAGGTTGATATGTCCGAT
CAGTTTGGGATGACGCTTCGCCGAACGGAGAGGCTTCACCTTGTTCCTAAAATTTACAAATAAGTACCACCGTAGGTTTG
------TGTTTGTATCAGCTGATACTGTCAGCTACCATCGCATGGTCTGTTAGTTGAGTGCCTATTACTATGTCACCTTA
ATGTAGTCGTGTTGCATGCTTAATAGCTCCGGGAGTTTGTTGCACACGAGATGGACCTGTCGGATCCTCAATAAATGTAA
CAGCAAATGATGAATAAAAGTATGGTTCTATGGTATCAGTAGATC-----------------------------------
--------------------------------------------------------------AAAGATCATGGGTTCTCG
CCTG---ACCTTACTCTGCAGTTTGGATGCT---------GATGTGCAGCCATATAAACACTCGTGTCCCAAGGTTCGAA
AACC-TCTTCTCTTGGAATTTCATCATTGCTGACCCACCTCAAGTCGCTGGCGTTAGAGATAA--------TATCGTCAT
CGTCCTCCCACTGGTATTTTCCTAAGGGACTTAATATTATCCCCATGTTCATGGCT-GAACCAGAAGACATAACTTGTTG
AAAAATCAACATTCCAACCACA--------------AAGGAATTTAATAAGATATCTCTCTACAAAATGAGGGGGAAACA
TAACAATTACTGAACATTCTACT-----TGTCTTTGGAGAGTT-------------------------------------
---------------------------C-TTTATACATGAAAAGTCATAAGTGAAATGGATTTTCAAGGGAAAATGCATG
TATGTGTGTGCCCACATGTGTAGCTAATGTTCATTCTCTCTTACCTTATTTCACACTATTTTCAAGAAAGGGTGAGAGCT
CTACTACTTT-AGTTACATCAACTAGTAGCAATATTGCACTATTACATCAACTAGTAGCAATTTTGCAATATTCACTACT
CTTGTGAAATTTCATATTGGTCCTCATCATCATGGGTGG-CTACAAGAGAGTATATGTGCAATCTTTTTTACCCTTACAA
ACGAGAAGAGTTCAAGAAATATTGGACCCTTAGATGTCTTCATATATAAAATTGTAGATCTCACTGTGAGCTATGATTTT
CGTATAAAATTGACTCACTTCTCCAGAAGGCATCAAAGGTGACCTCATACCTTAGTGACAAATTTGCGAGTCATGTGACT
GCCATACAATGGTGTGCATAGGTACAAGCTAGAGCAGAAGAAGGTGAATGTTGTGAACCATCTGTGACTAAGGCATTAGG
TGTAGTTTCTTAGCATTACATATGGATGCAATTTTCTTGTTAATTATTCCAGTTAGTTGGCAATGGACAATAGTCATATT
>chr5D_1
TCGGTTTTTTGGCAAGCCATTCATGATTTCTTTCATGAGCAAAAGAACTACCCCCCGTATGA--------CAAAGAAGTG
ATCCATGATCGCAATGCAAAGTCGCTAGCCCATCGATGATACACCATTCAACATGAGGTCAACAAGTATT----GCGGCG
CATACACATAAACAAAAAAGCTGCAAGGTTTGTTCAGGTTTCCGTGCTAACATGAGGTCTTTGACACGGACAACCACACT
AGGTGCTTTTAAGATCGATGGATGTATAACACTTGACGAACATCCGTTGCTTTTGGTAGTAGTTGCATCTGTTTGTAAGT
ATATAA----ATGTATGTTTGAATTGCTATAGATCTAGTTAAAGTTTGTCAAAGAAATGAGA--CTGGACAAGGGCGGAC
ATTTGGTGACCCCAAGTGATCCGCGTTATAGGGACAATTCACAAGC-TTAACTGCCCCTATATATG--------------
-----------------------------------GAAGATACTTTTCTGGTTATATCTGTTTTTTAGATT-----TTTT
TTTAACACAGTACAATCAAAGTCGCTCACATAGATGAGCATACACTCACCTCTATTACCGCACGCGCACATACCTTATCC
CTATGAACACCTTCAAGAGACAGAGTCCGCACATTATCTTGAGGTCGACAAAGTCGCCACAGATGTCTTCGTAGTCGACA
GGAACATCTCCTCCCACTGAACGCACATCGCCGAAAGGCTTGGAATAAATTCAAGAAAATGTAAGCACCAATGTCAAGTT
TGGGACTTGAACTCTAATGGCTAGGGGATACCACCGTCCTCCTAACTATCCAACCACAAGTTCTCTTTGATTATATATGT
TTGATTGTGATCAGTGTTTCATATGGACAAAAATACCTTATTATTTACTGTCACGCTGGTAACATATTGCACTTGTTTTT
GGATTTTATTGAGAGTATATGATTTTTGTTGTCAACATAAAGTATTGCCAATTTTCTAGACAAGTCGTACGTGTGGCTGG
----AGTGAATAAACGTTACGGGTGTGCTTATATAGAGAGCGTGTGATGAGTAGGAGCCCAGCCATTCCTAGTCAGCTGT
CTGGACGCCATGGCTCTTGAAGCAGCGTACCACTACCTGCAGCGCGCCGTCGGCCATGGCACATCCACAGAAGCACTACT
ACTCACCGTTCTCCTGCTACTCATCATCCGAGTAGCATGGGTAAGAGCCTTCACCACCACCACCGCATCGACAAAATGCA
------AGCAGCAGCTCCCGCCTACACCTCCAGGCAAGCTGCCCATCATCGGCCACCTCCACCTCATCGGCTCCCACCCC
CACGTATCCTTCCGCGACCTCGCCGCAAAGCATGGCCGCGACGGCCTCATGCTCGTCCATGTCGGTGCGGTGCCCACCGT
GGTGGTGTCCACACCTCAGGCCGCCGAGGCCGTCCTGCGCACACACGACCACGTGTTCGCGTCCAGGCCACGTAACCCCG
TCGCCGACATCATCCGCTACAACTCCACTGACATCGCATTCGCGCCCTACGGCGACTACTGGCGTAGGGCTAGGAAGGTC
GTCAACACGCATCTGCTCAGCGTCAAGATGGTCTACTCCAAGCGCCATGACCGCGAAGAGGAGGTACCTAACTAAAGACG
---TATATTACTCTTCTTTAATAGAAACACAGTACAAACACAGATGCAAACACTGA----CTCACTGATCACTGCAGGTG
CGGCTCGTGGTCGCCAAGATCTGTGAGTTGGCCATGGCCGCTCCAGGCAAGGCGTTGGACATGACGGAGCTCCTGGGCGG
GTATGCCAGCGACTTTGTGTGCCGTGCGGTCCTCGGAGAGTCCCACAGGAAGCATGGCCGGAACGAGCTTTTCCGCGAGC
TCACCGAGATCAGCGCCTCCCTGCTGGGGGGATTCAACCTGGAGGACTACTTCCCTAGGTTGGCAAACCT---GGACGTG
TTCCTCAGGGTGGTTTGCTCCAAGGCAATGGGAGTCAGCAAGAGGTGGGACAACCTGTTTAACGAGCTCATCGCCGAGTA
CGAACACGGCAAGGAAGATAATGCGGAA---------------GACTTTGTACATCTTTTGCTTTCTCTAAAGAAAGAGT
ACGGTCTGTCCACAGATAACGTCAAGGCCATCTTGGTGGTAATTGACTCAACTTATC-ATTTGAAGTTGACATGCATGTT
GCCTAACAATTATGTAGGTAAATAATCGATAGCCAATACTAAG---ATTTGTGTGACCTTGTAACAGAACATGTTTGAGG
CAGCTATAGAAACATCATTCCTGGTGCTGGAATACTCCATGGCCGAGCTCATCAACAACAGGCACGTCATGGCCAAAGTG
CAGAAGGAGGTAAGGGAGTCCACACCCAAGGGCGAAAAGCTGGACCTGATAATGGAGGAGGACCTCAGCCGCATGCCGTA
CCTCAAGGCGACCATCAAGGAGGCAATGCGCATACACCCGCCGGCACCCTTCCTGCTCCCACACTTCTCCACCAACGACT
GCGAGGTCAACGGATACACCATTCCCGCGGGGACACGTGTCATTGTGAATGCTTGGGCTCTTGCCAGAGACCCGTCGCAC
TGGGAGAGAGCGGAGGAGTTCTACCCGGAGAGGTTTCTCCAAGAAGGCCGTGATGCAGAGGTCGACATGTATGGTAAAGA
TATCCGCTTTGTGCCTTTTGGTGCCGGGCGGAGGATCTGCGCGGGAGCTACTTTCGCGATCGCTACTGTTGAGGTAATGC
TGGCAAACCTCATATACCATTTCGACTGGGAGCTTCCGAGTGAGATGGAGGCCATTGGCGCAAAGGTTGATATGACGGAC
CAGTTTGGGATGACGCTTCGCCGAACGGAGAGGCTTCACCTTGTTCCCAAAATTTACAAATAAGTATCAACATCGTAGCT
TTGTGTTATTTGTATCGGCTGATAGGTCAGCTAGCCATTGCCCGTTATGTTAGC----TGCCTATTACTATCCCACCTTA
ATGTAGTCGTGTTGCATGCTT--------TGGGAGTTTGTTGCACATGAGAGGAACCTGTGGGATCCTCTACAAATGTAA
CAGCGAATAATGAAGAAAAGTATGGTTGTATG------GTAGATC-----------------------------------
--------------------------------------------------------------AAAGATCATGGGTTCTCA
ACTAATAACCTTACTCTGCTATTTGGAATGCCAATGTGGCGATGTGCAGCCATATAAACACTCGCGTCCCATGGTTCGAA
AACCTACTCTTCCTGGAATTTCAT--------------------------GCATTAGAGATAA--------TACTGTGAT
CGTCCTCTCACA-GTATTTTTCTACGGGCGTTAATATTATCCCCATGTTCATGGCTGGAACCAGAAGACATAACTTGTTG
AAAAATCAGCATTCCAACAA-TGAGAAATAAAGAATAATGAATTTAATA--ATATCTCACTACAAAATGAGG-AAAAGTA
TAACAATTACTGAACATTCCACTGTACTTGCCTTCGGAGGCTTCACCATGGAGCAACTTAACCATTGTTATAATTTGAGT
ATGTAACTAATAACATCAGTCCTGATAC-TTTATGCGTGAAAAGTCACAGGTGAAATGGATTTTGAAGCGAAAATGCATG
TATGCATGTGTGCACCCGTGTAGCTAATTTTCCATCTCTCTTACCTTATTTCACACTATTTTCAAGAAAGGGTGAGAGCT
CTACTA-TTT-AGTTACATCAACTAGTAGCAATAATGCACAATTCAG-----------------------------TATT
CATATGAAACTTCATATTGGTCCTCATCATCATGGGC-G-CTACAAGAGAGTATATGTGCAATCTCTTTACCCTGTA---
-----AAGAGTTCAAGAGATATTGGACCCTTTCATGACTTCAAATAAAATATTATAGATCTCATTGTGAGCTATGATTTT
CGTATAAAATTGTCTCACTTCTACAGAAGGCATCAAAGGTGACCCATTACCTTAGTGAGAAATTTGTGAG----------
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>chr5A_115
GATAT---------------------------------------------------------------------------
----------------------------------------ACATCATTCAACATGAGGTCAACAATTATT----GCGGCC
CATACACACAAACACAAAAGCGGCGAGGTTTGTTCAAGTTTCCGTGCTAAAATGAAGTCTTTGACACGGACAACCAGACT
AGGTGCTTTTAAGATCTATGGATGTATAAAACTTGATGAACATCTGTTGCTTTTGGTAGTAGTTGCATCTGTTTGTAAGT
ATATAA----ATGTATGTTTGGATTGC--TAGATCTAGTTAAAGTTTGTCAAAGGAATGAGGAGCTGGACAAGGGCAGAC
ATTTGGTGACTCCAAGTGATCCGCGTTATAGGGACAATTCGCAAGCCTTAACTGTCCCAATAGACTAGCATACACTTATC
CCTATGAATTCGCAAGCCTTAATTGCGCTATAGATGAAGATATTTTCCTGGTTATATCTGCGTTTTTTTACATCTCTTTT
TTTAGCACGGCACAATCGAAGTCACTCACATAGACGGGCATACA-----------------------------CTTATCC
CTATGAACACCTCTAAGAGACAGAGCCAGCACATTATCTTGACATTGATGAAGTTGCCACATACGCCCATG--GTCGACA
GAAACGTCTCCTCTCACTGAACACACATCACCAAAAGGCCTGGAATAAATCCAGAAAAATATAAGCACCAATATCAAGTT
TGGGACTTGAACTTTGGTAGGCAGGGATACCAAT-GTCCTCCTAACTATCCAGCCAAAAGTTCTCTCTGATTATATATGT
TTGATCGTAATCAATGTTTCATATGGACAAAAATACC-TATTATTTAATGTCACGCTGGTAACGTATTCCACTTGTTTTT
GGATTTTATTGAGAGTATATGATTTTTGTTGTCAACATAAAGTATTGCCAATTTTGTAGACAAGTCGT----GTGGCTGG
AGCTAGCGAATAAACGTTACGGGTGTGCTTATATAGAGAGCGTCTGATGAGTAGGAAGCCAGCCATTCCTAGTCAGCTGT
CTGGACGCCATGGCTCTTGAAGCAGCGTACCACTACCTGCAGCGCGCCGTCGGCCATGGCACATCCACAGAAGCACTACT
ACTCACCGTTCTCCTGCTACTCATCATCCGACTAGCATGGGTAAGAGCCTTCGCCACCACCACCGCATCAGCAAAATGCA
------AGCAGCAGCTCCCGCCTACACCTCCCGGCAAGCTACCCATCATCGGCCACCTCCACCTTATCGGCTCCCACCCC
CACGTCTCATTCCGCGACCTCGCCGCAAAGCATGGCCGCGACGGCCTCATGCTCGTCCATGTCGGTGCCGTGCCCACCGT
CGTTGTGTCCACGCCCCAGGCCGCTGAGGCTGTCCTGCGCACGCACGACCACGTGTTCGCATCCAGGCCACGTAACCCCG
TCGCCGACATCATCCGCTACAACTCCACAGACATCGCGTTCGCGCCCTACGGCGACTACTGGCGTAGGGCTAGGAAGGTC
GTCAACACGCATCTGCTCAGCGTCAAGATGGTCTACTCCAAGCGCCATGACCGCGAAGAAGAGGTACCTAACTAAAGATG
TACTATATTGCTCTTCTTTTATAGAAACACGGTACAAACACAGATGCTCACACTAATCGACTCAATGATCACTGTAGGTG
CGGCTCGTGGTCGCCAAGATCCGTGAGTTGGCCACAGCTGCTCCAGGCAAGGCATTGGACATGACGGAGCTCCTGGGCGG
GTACGCCAGCGACTTTGTGTGCCGTGCGGTCCTTGGAGAGTCCCACCGGAAGAATGGCCGGAACGAGCTTTTCCGCGAGC
TCACCGAGATCAGCGCCTCCCTGCTGGGGGGATTCAACCTGGAGGACTACTTCCCAAGGTTGGCAAACCT---GGATGTG
TTCCTCAGGGTGGTTTGCTCCAAGGCAATGGGAGTCAGCAAGAGGTGGGACAACCTGTTTAACGAGCTCATCGCCGAATA
CGAACACGGCAAGGAAGATAACGCGGAG---------------GACTTCGTACATCTTTTGCTTTCGCTGAAGAAAGAGT
ACGGTCTCTCCACGGATAACGTCAAGGCCATCTTGGTGGTAATTAACTCAACTTATAAATTTGAAGTTTTCATGCATGTT
GCATAATAATTAAGTAGGTACACAATTGATAATCGATACTAAGATTATTTGTGTCATCTTGTAACAGAACATGTTTGAGG
CAGCTATAGAAACATCATTCCTGGTGCTGGAATACTCCATGGCCGAGCTCATCAACAACAGGCACGTCATGGCCAAAGTG
CAAAAGGAGGTAAGGGAGTCCACACCCGGCGGCGAAAAGCTGGACCTGATAATGGAGGAGGACCTCAGCGGCATGCCCTA
CCTCAAGGCGACCATCAAGGAGGCGATGCGCATACACCCGCCGGCGCCCTTCCTGCTCCCACACTTCTCCACCAACGACT
GCGAGGTTAATGGATACACCATTCCTGCGGGAACACGTGTCATTGTGAATGCTTGGGCTCTTGCCAGAGACCCGTCGCAC
TGGGAGAGAGCGGAGGAGTTCTACCCAGAGAGGTTTCTCCAAGAAGGCCGTGATGCAGAGGTCGACATGTATGGCAAAGA
TATCCGGTTTGTGCCTTTCGGTGCCGGGCGGAGGATCTGCGCGGGGGCTACTTTCGCGATCGCTACTGTTGAGGTAATGC
TGGCGAACCTCATATACCATTTCGACTGGGAGCTTCCGAGTGAGATGGAGGCCATTGGCGCAAAGGTTGATATGTCAGAC
CAGTTTGGGATGACCCTTCGCCGAACGGAGAGGCTTCACCTTGTTCCTAAAATTTACAAATAAGTATCACCGTTGTAGCT
TTGTGTTATTTGTATCGGCTGATAGGTCAGCTAACCATTGTCCGTTATGTTAGC----TGCCTATTACTATGCCACCTTA
ATGTAGTCGTGTTGCATGCTT--------CGGGAGTTTGTTGCACACCCGACGGACCTGTGGGATCCTCTACAAATGTAA
CAGCGAATAATGAATAAAAGTATGGTTGTATG------GTAGATCGTGGTCTATGGATTTTGATGTAATTTTTATTGTTT
TTAGTGTTCGTTGTACCACCATGATTGAAGATGAATAGATTGAAAAAATTTCCCGCAAAAAAAAAGATCACAGGTTCTCA
ACTA---CCCTTACTCCGCTATTTGGAATGCCGATGTGGCAATGTGCAGCCATATAAACACTCGTGTCCCAAAGTTCGAA
AACTTTCTTCTCTTGGAATTTCAT--------------------------GCGTCAGAGATAAGCTAATACTACCGTCAT
CATCCTCCCATA-GCG----------------------------------------GGAACCAGAAGGCATAATTTTTTG
AAAAATCAGCATGCCCACTACTGAGAAATAAAGAACAAGGAATCTAATA--ATATCTCACTACAAAATGACGAAAAAGCA
TAACAATTACTGAATATTCCACAACACTTGTCTTTGCAGAGTTCACCGTGGGCCAACTTAA--------------TGATC
ACGTAATTAATAACATCAGTCTTGACATTTTTATGCATGAAAAGTCACACGTCAAATGGATTTTCAAGCGAAAATGCATG
TATGCGC--GTGCACATGTGTAGCTAATGTTCATTCTCTCTTGCCTTATTTCACACTATTTTCAAGAAAGGTTTAGAGCT
CTACTA-TTTTAGTTACATCAACTAGTAGCAATATTGCACTATTCAG-----------------------------TATT
CTTGAGAAATTTCATATTGGTCCTCATCATCATGGGC-GGCTACATGAGAGTATATGTGCAATCTTTTTTACCCTTACAT
T------------AAGAAATATTGGACCCTTAGATGTCTTAGAACAAAACATTTTAGATCTCATTGTGAGCTATGATTTC
CGTATAAAATTGTCTCACTTCTATAGAAGGCATCAAAGGTGAACCCATACCTTAGTGAGAAATTTGTGAG----------
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>chr5A_1009
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------------------------------------------------------------------------TCAGTTGT
GTGGACCACATGGCTCTTGAAGCAGCGAACCACTACCTGCAGCTCGCCGGCGTCCATGGCACATCCACGCCGGCAGTACT
ACTCACCGTTCTCCTGCTACTCATCATTCGACTAGCATGGGTGAGG---------ACCGCAACCGCGTCAACAAGATTCG
GCAAGCAGCAACAGCTCCCGCCTTCACCTCCAGGCAAGCTGCCCATCATCGGCCACCTCCACCTCCTCGGCTCCCAGACA
CACATATCCATCCGGGACCTCGATGCCAAGCATGGCCGCAATGGCCTCTTGCTCCTCCGCATCGGTGCCGTACCCACCTT
GTTCGTGTCCTCGCCGAGCGCCGCCGAGGCCGTCCTGCGCACCCACGACCAAATCTTTGCGTCGCGGCCGCCATCCATGG
CCGCCAACATCATTCGCTATGGGCCAACAGACATCGCGTTTGCACCCTATGGCGAGTACTGGCGGCAGGCCAGGAAGCTC
TTAACCACACATATGCTCAGCGCGAAGGTGGTGCACTCCTTCCGCCATGGTCGTCAAGAAGAGGTAAGAACTTTTCCTCC
TGCGCAGAAACGAATATCGACCGTTAGTTAGTCCATCACTCATCATCTGACTCTCTGATC------GATTGCTGCAGGTG
CGCCTCATTATCAACAAGATCCGTGCGGCGGCCACCAG------AGGCACGGCGGTGGACATGAGCGAGCTCCTGTCCGG
CTACACCAATGACGTCGTATGCCGTGCGGTCCTAGGAGAATCCCACCGCAAGGAAGGCCGGAACAGGCTTTTCAGCGAGC
TCACAGAGATCAATGTCTCCCTTCTTGGTGGGTTCAGCCTCGAGAATTACATCCCCCCAAATATGGTAATGGCGGATGCG
CTCTTGAGGCTGGTTTCCGTCAAGGCTCAGCGACTCAACAAGAGGTGGGACGACTTGTTCAACGAGATCATCGAGGAACA
CCTACACCCCAGCAAACCATCATCTGGCGAGCAGCAAGCAGCAGATTTCATAGATCTTCTGCTCTCTCTCAAGGAAGAGT
ACGGTCTCACTACGGATAACATCAAGGCCATTTTGGTGGTAAT-------------------------------------
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>SNPs
--------------------------------------------------------SSSSSSSSSSSSSS---------S
-------------------------------------S--------------------------------SSSS------
-----------------------------------------S--------S-------------S---------------
---S-------S----------------------S--------------------S------------------S-----
------SSSS-----------------------------------------S---------------------------S
-----------S--------------------------------------------------------------------
-----------------------------------------------S---S--------------------------S-
---SSS--SS-S---------------------------------------------S----S-S---------------
S---S----------------------S------------------------S--------S------------------
------------------SS-------------------------------S-------------S-S------------
-------------------------S--------S---------------------------------S-----------
-----------------------------------------------------S--------------------------
-------------------S------------------------------------------------------------
----------------------------------------------S----------------------S----------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------------------------S---------
--S-----------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------S-------------------------------------------------S------S-S
------------------------------------S-------S-----------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
-----------------------------------------S--------------------------------------
S-------------------------------------------------------------------------------
----------------------------------------------------S----------------S----------
--------S----------S---S--------S--S--------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
---------------------------------------------------------------------------S----
-----S-------------S-----------------S-----------S------------------------------
-----------------------------------------------------------------------------S--
---------------S-----S---------S-------------S----------------------------------
-------------------------------------S-----S--------------------------------S--S
------------------------------------------------------------------S------S-SSSSS
-------S--------S-------SSSSSSSSS-----S--SS-S-S------SSSSS--------------S-------
---------------------SSSSSSSS----------------------S--------S--------S-S--------
----S---S------------------S----SSSSSS------------------------------------------
-------------------------------------------------------------------------------S
S--S---------------SS------SSSS-------------------------------------------------
------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S------
-----------SS-------S---S---SS--------------------------------------------------
--------S---------S--S---------------------------SS-------S-------------SSS--S--
-------------------S------------------------------------------------------------
----------------------------------S------------S-S------------------S-----------
----S-----SS--------------------------------------------------------------------
------S-------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-
------------------------------------SS-----------------------------------------S
SSSSS-------------------------------------S---S--S---S---------S----------------
------------S---------S---------------------S-------------S-------S---SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_668
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-------CACCTCCAAGAGACAGAGTCG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_1717
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------GACACAGACGCTCACACTGA------------------------
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>forward_1621
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TCAACACGCATCTGCTCAGT-----------------------------------------------------------
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>reverse_3387
--------------------------------------------------------------------------------
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--------------------------TTGCTGACCCACCTCAAGTC----------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
