>input_sequence_40222
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ATGAAAGTAAGCGTTGGACACCAGCCAAAGGGTCAGCTATGCCTGGTCTTAGCCGTGCTGGTTACCATGGCAATGCTCGG
TGAGGCAGCGAGAAGCTTGCCACCACCTTCTCTTTCAGCATCGCCAACGTATGCTCCTATCATTAAGGTGATAGGCAAAG
CATACTGCTATAGATGCTTCAACGAGGCACACCCAGAAGAATCCCATGGGAAGGAGCACCTGGAAGGTAACATTTCAGTT
ATTTGCAGTTCTCGTTATTTACGCACGTTAATGCAGTCAGCTTGGAAATACGTCAAGTTTCTTCTTGTTCATAGTTATCT
TGCTTGAACACTGCCTGTTGACAAGAAAAGTGTATTCAAGCATACCATACTGAAGATCCAAGAACATGGCTAGAGGAAAA
GTTTAAGCTTGGTTATCATTATTATCTGCTGTAGTTACAAAAAGAAAATCTGCCAAAGTCTGCACAAGAAGGATCTGCAC
ATTTCCTTTGGTACAGGGCATTTTTAGTGTTTTA--GAAGCCTATACGTGCTTACTTAAATAAAAAACACCAAGTTAAAG
TTTGCTACCAGGTAGGCCAAAGTACAGTAGACTAAGGATATACATATATGGATATGCGACTAATACCAAGACGAACTGTG
AACCCAAAGTGTAGCTAAATTCATCGAAGCGAAAAAGTACTTA-AAA-TGGATGATGTTTTACAAATTGTTCATTCTTCC
TGAATATCTTTCAGCATTTCATACTGCAACTTAATACC-TTTTTATCATTATCTGGTGCAGGAGCCATGGTCAAGGTCAC
TTGCCAGGCCAATGACCAGGCAATAGTGGGATTTGGCTACACCGAAAGCAATGGCAAATACAGTGTGGCCATTACTGGTT
TGCCACTTAGCGGCACCTTTGGGGCTGACTCATGCAAGGTTGAGCTCCATGCAGCAGCAGGAGGATCTGACTGCAATGTG
CCCATGGAGTTAAATCTCTCTGGAGTTAGCGTTTACTCAAAGTCCAATGAAGAAGTGGTTCTCCAAGCCAACCAAGTAAT
GGCATTTGGATCAAAGAAAACATTTGCTGGATGTTCAAAACCTCACATTCTACCATCAATGTATCCATCTAATTCACAGC
CACTCCCATACCAGCATCCCTCACCTCCATCCAACTACAAATCCCCACCATTACCGCACCAGCATTCGCCACCTCCTTCT
AACAAGTTTCCACCTCCATCATATCAGTATCCATCACCTCCACAGAACTTCTACTCTTCGCCGCCACCATACCAACAGTC
CACACCTTCAAACAACTACCAAGCTCCACCAACATCTAACAATCCAACACCAACCCACAAGTATTTACCACCCCCATACT
ACTACAACTCCCCACCTCCGAACAGCCACGTAGCTCCACCACTGCCATACCTGCAGTCCCCGCCCCCATACAACTACAAG
TCACCTATTCTACCATTGTCACCAACGCCTCCTCAACATTATAACTCTCCACCTCCATTTAACTATGGATCTTCACCCCC
ACCTTACCAATATTCTCCACTGCTGCCTCCAAAACATCTACAACCAAATGTTCCTCATGCTAATCCGCTACCAGCATCAA
TATCTCCACGGTCTCTATACCCCTATGGCTCTCCACCACCAGCATCAATATCCCCACAGCCTCTTTACCCCTACAGCTCT
CCACCATCATATCTGAACTCGTACCAATCCCCACCACCACCGATTCAGCTTCCTCATGTAAAATCGCCACCAGTTTCTTC
AACATCTCCACAGCCTCTGC------------------------------------------------ACCACTACAGCT
CTCCACCACCATCGCTTCCAAACTCGTACCAATCCCCACCACCACCGATTCAGCTTCCTCATGTAAAATCGCCACCAGTT
TCTTCAACACCTCCACAGCCTCTGCACCACTACAGCTCACCACCACCATCGCTTCTGAACTCCTACCAATCCCCGCCACC
ACCGAGTCACCTGTCATAA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr3B_1_TraesCS3B01G427400
AGGGCAAACATGCCAAAGATGCCGCACTGTAGATGTTTACCAGAATGGATTCGGTTTAGCAGCACCACTGTGAATACTCC
ATGGAGTGGAAACTTATGTGCCCAGCGC----AATTGACATCAAACCAAACCTT-------GTTACCGCCACGGTTTTGT
CGTTGAAGTCGATGATGAGGGCCAGACCTATTTCATTTGGTACCGTAGCCTGACAAATCATGTGTTTCTTCCAATTCCAA
GTGGACACACCTGGAACTTTGTCAGTTTTGGTAAATAAGGCTTTAACCTTCACCACCTCCCCCCGC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AAAAAAATATAGAAATT
CACCACCTTGATCTACCC---TGGTCAGAGCTTATAAATGATACACCTTCAAAGACACTGGTTTATGCTAAAAGAAACGT
AAGAAAATTTCTAAAAGAAACGTAAGAAAATTTGCATCACAAACTTCCAGTTTATGCTATCGAGTACTATGAAACATGAA
CTTTTCTAAGATAAATA---------------------------------------------------------------
-------------------------------------------GAAAAAAAGATACCAAACTGCTCTGCTCTTTTACATT
CAGGTGAGACGAATTCAGTATGCAGGATAAACTGCAAAAGATATGTACAAAGACCCTTGAGGATTTACAAGCAACTGAAT
AAATATGTGCATCACGCCGGTGAAATTTTTCATGGATAACATAATTGTGTATCTGCGGTTACTTCAAAATCTACAATAGT
AATTCTCTGAAATAACATACAGGCAGATTTATATACACCATGCAGTACTCCAACCACAAAAGGTTATCATAAATCATAAC
TAA-TTCCACATTTCTCCCCTGAAATCAAGTGGTTGACAAAGTACATGCTCTAATTTTTTTT--AGGGAAGTACAGGCTC
TAATCACTCAAATGATCATTCTACCTTACCAGCTCCACCTGCTTCCCCAGAGACCCTGCCAAGTGCCACCTTGAACATTA
TAAATACTCATCCATACCAAAGCCAAAATCATTCACATTCCCCCATCTCCTCCTCTCACTCGAGAAAGCACTGTCCAGCC
ATGAAAGTAAGCGTTGGACACCAGCCAAAGGGTCAGCTATGCCTGGTCTTAGCCGTGCTGGTTACCATGGCAATGCTCGG
TGAGGCAGCGAGAAGCTTGCCACCACCTTCTCTTTCAGCATCGCCAACGTATGCTCCTATCATTAAGGTGATAGGCAAAG
CATACTGCTATAGATGCTTCAACGAGGCACACCCAGAAGAATCCCATGGGAAGGAGCACCTGGAAGGTAACATTTCAGTT
ATTTGCAGTTCTCGTTATTTACGCACGTTAATGCAGTCAGCTTGGAAATACGTCAAGTTTCTTCTTGTTCATAGTTATCT
TGCTTGAACACTGCCTGTTGACAAGAAAAGTGTATTCAAGCATACCATACTGAAGATCCAAGAACATGGCTAGAGGAAAA
GTTTAAGCTTGGTTATCATTATTATCTGCTGTAGTTACAAAAAGAAAATCTGCCAAAGTCTGCACAAGAAGGATCTGCAC
ATTTCCTTTGGTACAGGGCATTTTTAGTGTTTTA--GAAGCCTATACGTGCTTACTTAAATAAAAAACACCAAGTTAAAG
TTTGCTACCAGGTAGGCCAAAGTACAGTAGACTAAGGATATACATATATGGATATGCGACTAATACCAAGACGAACTGTG
AACCCAAAGTGTAGCTAAATTCATCGAAGCGAAAAAGTACTTA-AAA-TGGATGATGTTTTACAAATTGTTCATTCTTCC
TGAATATCTTTCAGCATTTCATACTGCAACTTAATACC-TTTTTATCATTATCTGGTGCAGGAGCCATGGTCAAGGTCAC
TTGCCAGGCCAATGACCAGGCAATAGTGGGATTTGGCTACACCGAAAGCAATGGCAAATACAGTGTGGCCATTACTGGTT
TGCCACTTAGCGGCACCTTTGGGGCTGACTCATGCAAGGTTGAGCTCCATGCAGCAGCAGGAGGATCTGACTGCAATGTG
CCCATGGAGTTAAATCTCTCTGGAGTTAGCGTTTACTCAAAGTCCAATGAAGAAGTGGTTCTCCAAGCCAACCAAGTAAT
GGCATTTGGATCAAAGAAAACATTTGCTGGATGTTCAAAACCTCACATTCTACCATCAATGTATCCATCTAATTCACAGC
CACTCCCATACCAGCATCCCTCACCTCCATCCAACTACAAATCCCCACCATTACCGCACCAGCATTCGCCACCTCCTTCT
AACAAGTTTCCACCTCCATCATATCAGTATCCATCACCTCCACAGAACTTCTACTCTTCGCCGCCACCATACCAACAGTC
CACACCTTCAAACAACTACCAAGCTCCACCAACATCTAACAATCCAACACCAACCCACAAGTATTTACCACCCCCATACT
ACTACAACTCCCCACCTCCGAACAGCCACGTAGCTCCACCACTGCCATACCTGCAGTCCCCGCCCCCATACAACTACAAG
TCACCTATTCTACCATTGTCACCAACGCCTCCTCAACATTATAACTCTCCACCTCCATTTAACTATGGATCTTCACCCCC
ACCTTACCAATATTCTCCACTGCTGCCTCCAAAACATCTACAACCAAATGTTCCTCATGCTAATCCGCTACCAGCATCAA
TATCTCCACGGTCTCTATACCCCTATGGCTCTCCACCACCAGCATCAATATCCCCACAGCCTCTTTACCCCTACAGCTCT
CCACCATCATATCTGAACTCGTACCAATCCCCACCACCACCGATTCAGCTTCCTCATGTAAAATCGCCACCAGTTTCTTC
AACATCTCCACAGCCTCTGC------------------------------------------------ACCACTACAGCT
CTCCACCACCATCGCTTCCAAACTCGTACCAATCCCCACCACCACCGATTCAGCTTCCTCATGTAAAATCGCCACCAGTT
TCTTCAACACCTCCACAGCCTCTGCACCACTACAGCTCACCACCACCATCGCTTCTGAACTCCTACCAATCCCCGCCACC
ACCGAGTCACCTGTCATAAGCAAC-AGGAAGGACTTCTTGAAATGTAAGTTTCCTAGTGGGATTTTATATGGTAACAGTA
TAGTACCATTCAAACTTTTACAAAATGTATATAGTCTCTTTGAATTTGAATAGCCGTAATGTGAAGTATTAAACTTTCAA
GAGAGCTCATATAGACTCAACATAAAAGATA-GCATTGGTTAGATGACTGCCAAGTAAGTAGATTCACAAAGTATATGAC
TCAAT----------------------CCATCTCTTTTCAGGATCAGACGTGGGCAGAATAAACAGAAGAGTTGAAGACT
ATCTCGAGAGGAAGAAGCGCCGCAGCTGGAGTTTTCAACTGTGGATCTCAGTCTCTAGTAT-------------------
--------------------------------------------------------------------------------
---------------TTATTTACCCAAGTATCTACTGCTGCTTCAGCTTTCCCTTTGTTTCCTAGAGCTATTCCAGCAAT
GTAACCATAAGTCGTA---TGAGCTATTGT---TAGTGTACCACTGTTCTGTACTCAATCCAATATATGGCAGGGGGGGT
TCCTTACAGCCCTAAAATACTTTCTACTGTGCATTTCTTTCTTGAGAAACTGGAACAAAA-TAGAGAGATGCTGTGGCTT
GACTGGCAGATCCACTTATTCCAGATTTGTTCCGCCGTTTATGCTGTGGCATCTATCCAAGATAGANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTATGGCTCAAATTCAATTCAGTA
ATCAAAAGTTGGAAAACCGAGCTTGGAATGCAGTGCGCTCACGA
>chr3D_1
AGGGCAAACATGCCAAAGATGCCGCACTGTAGATGTTTACCAGAATGGATTCAGTTTAACTGCACCACTGTGAACACTCA
ATGGAGTGGAAACTTAGGTGCCCGACGAAATTAATTGACATCACACCAAACCTTCCGGATTGTTACCGCCGCAGTTTTGT
CGTCGAAGTCGAATATGACGGCCAGGCCTATTTCATTTGATACCGTAGCCTGACAAGCCATGCGTTTCTTCCAATTCCAA
GTGGACACACCTGGAAATTTGCCAGTTTTGGTAAATAAGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA------------------
---------------------------------------------------------------------------AACTT
CACCACCTCGATCTACCCGGGTGGTCAGATGTTATATATGATACACCTTCAAAGACACTGGGTTTACACAGCTCAGGTT-
--AAATATTTCCATAAGAAACGTAGGAAAATTTGCATCACAAACTTCCAGTTTATGCTATTGATTACTATGAAACATGAA
CTTTTCTAAGATAAATA---------------------------------------------------------------
-------------------------------------------GAAAAAAA-ATACCAAACTGCTCTGCTCTTTTACATT
CAGGTGCGATGAATTCAGTATGCAGGATAAACTGCAAAAGATATGTACAAAGACCCTTGAGGATTTACAAGCAACTGAAT
AAATATGCGCATCACACTGGTG--ATTTTTCATGGCTAACATAATCATGCATCTGCGATTACTTCAAAATCTACAACAGC
TATTCTCTGAAATAACATAGAAGCAGATTTATATACACCATG--------CAACCACAAAAGGTTATTATAAATCACAAC
TAA-TTCCATATTG--TCCCTGAAATCAAGTGGC-GACAAAGTACATGCTCTAATCTTTTTTTGAGGGAAGTACAGGCTC
TAATCACTCCATTGGCCATACTACCTTACCAGCTCCACCTGCTTCCCCAGAGACCCTGCCACGCGCCATCCTGAACATTA
TAAATACCCATCCATACCAAAGCCAAAATCATTCACATTCTCCCATCTCCTCATCTCACTTGAGAAAGCACTGTTCAGCC
ATGGAAGTAAGCGTTGGACGCCAGCCAAAGGGTCAGCTATGGCTGGTCTTAGCCGTGCTGGTTGCCTTTGCAATGCTCGG
TGAGGCAGCCAGAAGCTTGCCACCACCTTCTCTTTCAGCATCGCCAACGTATGCTCCTATCATTAAGGTGATAGGCAAAG
CATACTGCTATAGATGCTTCAACGAGGCACACCCAGAAGAATCCCATGGGAAGGAGCACCTGGAAGGTAACATTTCGGTT
ATTTGCAGTTCTCGTTATCTACGCACGTTAATGCAGTCAGCTTGGAAATACGTCAAGTTTCTTCTTGTTCATAGTTATCT
TGCTTGAACACTGCCTGTTGACAAGAAAAGTGTATTCAAGCATACCATATTGAAGATCCAAGAACATGGCTAGAGGAAAA
TTTTATGCTTGGTTATCATTATTATCTGCTGTAGTTACAAAAAGAAAACCTGCCAAAGTCTGCACAAGAAGGATCTGCAC
ATTTCCTTTGGTACAAGCCATTTTTAGTGTTTTA--GAAGCCTATACGTTCTTGCTTAAATAAAAAACACCAAGTTAAAG
TTTGCTACCAGGTAGGCCAAAGTACATTAGACTAAGGATATACATATATGGATATGCGACTAATACCAAGATGAACTGTG
AACCCAAAGTGTAGCTAAATTCATCGAAGCGAAAAAGTACTTA-AAAATGAATGATGTTTTACAAATTGTTCATTCTTCC
TGAATATCTTTCAGTATTTCATACTGCAACTTAATA-CTTTTTTATCATTATCTGGTGCAGGAGCCATGGTCAAGGTCAC
TTGCCAGGCCAATGACCAGGCAATAGTGAGATTTGGCTACACCGAAAGCAATGGCAAATACAGTGTGGCCATTACCGGGT
TGCCACTTAGCGGCACCTTTGGGGCTGACTCGTGCAAGGTTGAGCTCCATGCAGCAGCAGGAGGATCTGACTGCAATGTG
CCCATGGAGTTAAATCTCTCTGGAGTTAGCGTTTACTCAAAGTCCAATGAAGAAGTGGTTCTCCAAGCCAACCAAGTAAT
GGCATTTGGATCAAAGAAGACATTTGCTGGATGTTCAAAACCTCACATTCTACCATCAATGTATCCATATAATTCACCGC
CACTCCCATCCCAGCATTCCTCACCTCCGTCCAACTACAAATCCCCACCAGTACCATACCAGCATTCACCACCTCCTTCT
AACAAGTTTCCACCTCCATCATATCAGTATCCATCACCTCCACAGAACTTCTACTCTTCGCCGCCACCGTACCAACAGTC
CACACCTTCAAACAACTACCAAGCTCCACCAACATCTAACAATCAAACACCAACCCAGAAGTATTTACCACCCCCATACT
ACTACAACTCCCCACCTCCGAACAGCCACGTAGCTCCACCACTGCCATACCTGCAGTCCCCACCTCCGTACAACTACAAG
TCGCCTCTTCTACCATTGTCACCAACGCCTCCTCAACATTATAACTCTCCACCTCCATTTAACTATGGATCTTCACCCCC
ACCTTACCAATATTCTCCACCGCTACCTCCAAAACATCTACAACCAAATGTTCCTCATGCTAATCCGCTACCAGCATCAA
TATCTCCACAGCCTCTTTACCCCTATGGCTCTCCACCACCAGCATCAATATCTCCACAGCCTCTTTACCCCTACAGCTCT
CCACCACCATATCTGAACTCTTACCAATCCCCACCACCACCGATTCAGCTTCCTCATGTAAAATCGCCACCAGTTTCTTC
AACGTCTCCACAGCCTCTGC------------------------------------------------ACCACTACAGCT
CTCCACCACCATCGCTTCTGAACTCGTACCAATCCCCACCACCACCGATTCAGCTTCCTCATGTAAAATCGCCACCAGTT
TCTTCAACGCCTCCACAGCCTCTGCACCACTACAGCTCACCACCACCATCGCTTCTGAACTCCTACCAATCCCCCCCACC
ACCGAGTCACCTGTCATAAGCATC-AGGAAGGGTTTCTTGAAATGTAAGTTTCCTAGTGGGATG---TGTGGTAACAGTA
TAGTACCATTCAAACTTTTACAAAATG--------------------------CCGTAATGTGAAGTCTTAAACATTCAC
AAGAGCTCATATAAACTCAACATAAAAGATA-ACATTGGTTAGATGACTGCCAAGTAATTAGATTCCCAAAGTATATGAC
TCAAT----------------------CCATCTCTTTTCAGGATCAGACGTGGGCAGAATAAACAGAAGAGGTGAAGCCT
ATCTCGAGAGGAAGAAGCGCCGCAGCTGGAGTTTTCAACTGAGGATCTCAGTCTCTAGTAT-------------------
--------------------------------------------------------------------------------
---------------T-ATTTACCCAAGCATCTAGTGTTGTTTCAGCTTGCACTCCGTTGCCTAGAGCTATTTCAGCAAT
GTAACCATAAGTTGTA---TGAGCTTTTCTTAGTAGTACATCAGTGTTCTATTTTCAATCCAATATACGGC-GGAGGTTT
CCTTTACATCCCTAAAATATTTTCTACTGCGCATTTCTGTCTCGAGAAACTGGAACAAAA-TAGAGAGATGGTGTGGCTT
GACTAGCCACTCCACTTATTCCAGATTTGTCCCACCGTTTATGCTGCGGCATCTATCCAAGATAGA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr3A_13
------------CCAAAGATGCCGCACTGTAGATGTTTACCAGAATGGATTCGGTTTAACTGCACCACTGTGAACGCTCC
ATGGAGTGGAAACTTAGGTGCCCGGCGC----AATTGACATCAAACCAAACCTT-------GTTACCGCCGCGGTCTTGA
CATCGAAGTCGATGATGACGGCCAGGCCTATTTCATTTGATACCGTAGCCTGACAAATCATGTGTTTCTTCCGATTCCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAAAATAAAAATAAAAATAAATT
CACCACCTCGATCTACC---GTGGTCAGAGCTGATAAATGATATACCTTCGAAGACACCGAGTTTACACAATTCAGGTT-
--GAATATTTCTAAAAGAAACATAGGAAAATTTCCATCACAAACTTCCAGTTTATGCTATCGAGTACTATGAAACATGAA
CTTTTCTAAGATAAATACTCCCTCTGTTCACTTTTATAAGGCTTTGTAGACATTTCAGACATTGTGCAAAACAGCTCAAT
TTCACTTGTCTGAAACGACTTATAAAAGTGAACGGAGGGAGTAGAAAAAAA-ATACAAAACTGCTCTGCTCTTTTACATT
CAGGTGAGATGAATTCAGTATGCAGGATAAACTGCAAAAGATGTGTACAAAGACCCTTGAGGATTTACAAGCAACTGAAT
AAATATGTGCATCAGGCCGGTGAAAGTTTTCATGGCTAACATAATTGTGTATCTGCGATTACTTCAAAATCTACAATAGT
AATTCTCTGAAATAACATACAAGCAGATTTATATACGCA------TACCCCAACCACCAAAGGTTATCATAAATCATAAC
TAAATTCCACATTTCTTCCCTGAAATCAAGTGGTTGACAAAGTACATGCTCTAATTTTTTTT--AGGGAAGTACAGGCTC
TAATCACTCAAATGGCCATACTACCTTACCAGCTCCACCTGCTTCCCCAGAGACCCTGCCAAGTGCCACCCTGAACATTA
TAAATACCCATCCATACCAAAGCCAAAATCATTCACATTCTCCCATCTCCTCCTCTCACTTGAGAAAGCACTGTCCAGCC
ATGAAAGTAAGCGTTGGACACCAGCCAAAGGGTCAGCTATGGCTGGTCTTAGCCGTGCTGGTTGCCTTTGCAATGCTCAG
TGAGGCAGCCAGAAGCTTGCCACCACCTTCTCTTTCAGCATCGCCAACGTATGCTCCTATCATTAAGGTGATAGGCAAAG
CATACTGCTATAGATGCTTCAATGAGGCACACCCAGAAGAATCGCATGGGAAGGAGCACCTGGAAGGTAAAATTTTGGTT
ATTTGCAGTTCTCTTTATCTAAGCACGTTAATGCAGTCAGCTTGGAAATACGTCGAGTTTCTTCTTGTTCATAGTTTTCT
GGCTTAAACACTACTTGGTGACAAGAAAA-TGTATTCAAGCATATCATACAGAAGATCCAAGAACATGGCTAGAGGAAAA
ATTTGAGCTTGGTTATCATTATTATCTGCTATATTTACAAAAAGAGAATCTTCCAAAGTCTGCACAAGAAGGATCTGCAC
ATTTCCTTTGGTACAGGGCATTGTTAGTGTTTTATAGAAGCCTATACATTCTTGCTTAAATAAAAA-CATCAAGTTAAAG
-TTGCTACCAGGTAGGCCAAAGTACAGTAGACCGAGGATACACATATATGGATATGCGACTAATACCATGATGGACCGTG
AACCCAAATTGTAGCTAAATTCATCGAAGAGAAAAACTACTTAGAAGATGGATGATGTTTTACAAATTGTTCATTCTTCC
TAAATGTCTTTCAGCATTTCATACTGCAACTAAATA-C-TTTTTATCATTATCTGGTGCAGGAGCCATGGTCAAGGTCAC
TTGCCAGGCCAATGACCAAGCAATAGTGAGATTTGGCTACACCGAAAGCAATGGCAAATACAGTGTGGCCATTACCGGGT
TGCCACTTAGCGGCACCTTTGGGGCTGACTCGTGCAAGGTTGAGCTCCATGCAGCAGCAGGAGGATCTGACTGCAATGTG
CCCATGGAGTTAAATCTCTCTGGAGTTAGCGTTTACTCAAAGTCCAATGAAGAAGTGGTTCTCCAAGCCAACCAAGTAAT
GGCATTTGGATCAAAGAAAACATTTGCTGGATGTTCAAAACCTCACATTCTACCATCGATGTATCCATCTAATTCACAGC
CACTCCCATACCATG---CCTCACCTCCATCCAACTACAAATCCCCACCATTACTGCACCAGCATTCACCACCTCCTTCA
AACAAGTTTCCACCTCCATCGTATCAGTATCCATCACCTCCCCAGAACTTCTACTCTTCGCCACCCCCA-----------
-------TCAAACAACTACCAAGCTCCACCAACATCTAACAATCCAACACCAACCCACAAGTATTTATCACCTCCATACT
ACTACAACTCCCCACCTCCAAACAGCCACGTAGCTCCACCGCTGCCATACCTGCAGTCCCCACCTCCGTACAACTACAAG
TCGCCTCTTCTACCATTGTCACCAGCGCCTCCTCGCCATTATAACTCTCGACCTCCATCTAACTATGGATCTTCACCCCC
ACCTTACCAATATTCTCCACCTGTACCACCAAAACATCTACAACCAAATGTTCCTCATGCTAATCAG-------------
-----------------------------------CCACCAGCATCAATATCACCACAGCCTCTTTACCCCTACAGCTCT
CCACCACCATATCTGAACTCGAACCAATCCCCACCACCACCGATTCAGCTTCCTCATGTAAAATCGCCACAAGTTTCTTC
AACATCTCCACAGCCTCTTTACCCCTATGGCTCTCCACCATCAGCATCAATATCTCCACAGCCTCTTTACCCCTACAGCT
CTCCACCACCATATCTGAGCTCT---TACCAATCCCCACCACCACCGATTCAGCTTCCTCATGCAAAAGCGCCACCAGTT
CCTTCAACATCTCCACAGCCTCTGCACCACTACAGCTCTCCACCACCATCACTTATGAACTCCCACCAATCCCCGCCACC
ACCGAATCGCCTGTCATGAGCATCAAGGAAGGATTTCTCGAAATGTAAGTTTCCTGGTGGGCTTTTATGTGGCAACAGTA
TAGTACCATTCAAAATTTTACATAATGTATATAATCTCTTTGAATTTGAATTGCTGTAATACAGAGT-TTAAACTTTCAA
GATAGTTAC-ATAAACTCAACATAAAAAGACTGCATTGGTTAGATGACTGTCAAGTAAATAGGTTCCCAAAGTATAGTCA
CGGGACATGTTAACCATATCGCTTGACCCATCTCTTTTCAGGATGAGACGTGGGAAGAATAAACAGAAGAGTTGAAGACT
ATCTCAAGATGAAGAAGCACCGCAGCTGGAGTTTTCAGCTGTGGATCTCAGTCTCTAATACTCCCTCCGTCCGGAAATAC
TTGTCATCAAAATGGATGAAAATGGATGTATCTAAAACTAAAATACATCTAGATACATCTATTTCAATGACAAGTATTTC
CGGACGGAGGGAGTATTATTTACCCAAGTATC-AGTGTTGTTTCAGCTTTCCCTTTGTTTCCTAGAGCTATTCCAGCAAT
GTAACCATAAGTTGTACTGTGAGCTTTTCT---TAGTATATCACTGTTCTATTTTCAATCCAATATACGGC-GGAGGTTT
CCTTTACATCCCTAAAATATTTTCTACTGTGCATTTCTTTCTCGAGAAACTGGAACAAAAATAGAGAGATGATGTGGCTT
GACTGGCCACTCCACTTATTCCAGTTTCGTTCCATGCTTTATGCCGCGGCATCTATCCAAGATA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>SNPs
----------------------------------------------------------S-S-------------S-----
----------------S------S----------------------------------------------S---------
---S--------------S------S-------------S----------------------------------------
----------------S----S--------------------SSSSSSSSSSSSSSSSSSSSSSSS--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-S-S-S-----
--------S----------------------------------------------------S--SSSSS--SSS-SSSSS
SS---S------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
---------S----------------------------------------------------------------------
-----------------------------------S---------------------S----------------------
---------------------S--------------------SSS---S-------------------------------
----------------S---------------------------------------------------------------
--------------SS---S--------------------------------------------------S---------
-------S--------------------------------S-------------------S-------------------
-----------------------------------------S---------------------S--S-S-----------
---------S----------------------------------------------------------------------
----------------------------------------------------------------------------S---
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
-------------------------------------------------S---S--------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
----------------------------S----------------------------------------------S--S-
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S--S--S------------
--S---S-------------------------------------------------------------------------
--------------------S---S-------------------------------------------------------
---------S-S----S-----------------------------------S---------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------SS------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S----------S----------------------------------S-----------
---------------------------------S-----------------S---------------S------------
-------------S--------------------------------------------S-------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S--S--S---------------------------------------
------------S------------S--S--------S--S---------S-SS-------------S---S--S--SS-
S-S-----S----------S----------------------S----------------------------S--------
-------SSS-----------------------S------------S-------------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_151
--------------------------------------------------------------------------------
---------------------------------------------------ACCAAACCTTGTTACCGCCA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1450
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GAGAAGCTTGCCACCACCTT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_1427
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CTTAGCCGTGCTGGTTACCA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_3220
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AAACTCGTACCAATCCCCACC----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------
>forward_2548
--------------------------------------------------------------------------------
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------------------------------------------------CATTACCGCACCAGCATTCG------------
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--------------------------------------------
>reverse_4495
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------AACCGAGCTTGGAATGCAGT----------
